#!/bin/ksh #************************************************************** # Author: Sonia Labetoulle # Contact: sonia.labetoulle__at__ipsl.jussieu.fr # $Revision:: $ Revision of last commit # $Author:: $ Author of last commit # $Date:: $ Date of last commit # IPSL (2012) # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC # #************************************************************** #======================================================================# # Display a report on how a simulation is faring. function ChangeUsr { CurrentGrp=$( groups $CurrentUsr | gawk '{print $3}' ) TargetGrp=$( groups $TargetUsr | gawk '{print $3}' ) echo $1 | sed -e "s/${CurrentUsr}/${TargetUsr}/" \ -e "s/${CurrentGrp}/${TargetGrp}/" } function SearchCatalog { typeset num unset SUBMIT_DIR fg_new=false if [ ! X${JobName} == X ] ; then NbOcc=$( gawk -v JobName=${JobName} \ 'BEGIN {x=0} $1 ~ JobName {++x} END {print x}' ${SimuCatalog} ) else NbOcc=0 fi if ( [ ${NbOcc} -eq 0 ] && ( ${fg_path} ) ) ; then set -A FileList $( ls ${ConfigPath}/Job_* ) if [ X$FileList == X ] ; then NbOcc=0 else NbOcc=${#FileList[@]} fg_new=true fi fi if ( [ ${NbOcc} -eq 0 ] && ( ${fg_search} ) ) ; then SEARCH_DIR=${WORKDIR} if [ ${TargetUsr} != ${CurrentUsr} ] ; then SEARCH_DIR=$( ChangeUsr ${SEARCH_DIR}) fi echo "${JobName} not in Catalog, we'll try to find it in ${SEARCH_DIR}" set -A FileList $( find ${SEARCH_DIR}/ \ -path ${SEARCH_DIR}/IGCM_OUT -prune -o \ -name Job_${JobName} -print ) if [ X$FileList == X ] ; then NbOcc=0 else NbOcc=${#FileList[@]} fg_new=true fi fi if [ ${NbOcc} -gt 1 ] ; then echo "More than one job" ind=0 while [ ${ind} -lt ${NbOcc} ] ; do printf '%2i) %-30s\n' ${ind} ${FileList[${ind}]} (( ind = ind + 1 )) done echo "Give your choice number or 'q' to quit : " read Choice if [ X${Choice} == Xq ] ; then exit else fg_new=true FileList=${FileList[${Choice}]} NbOcc=1 fi fi case ${NbOcc} in 0) echo "${JobName} not found." echo "You can try : *) '-s' option to automatically search your \$WORKDIR ; " echo " *) '-p' option to provide the directory (absolute path) " echo " containing the config.card ; " echo " *) manually editing your ${SimuCatalog}." exit ;; 1) if ( ${fg_new} ) ; then JobName=${JobName:=$( basename ${FileList} | gawk -F"_" '{ print $2 }' )} SUBMIT_DIR=$( dirname ${FileList} ) echo "${JobName} ${TargetUsr} ${HostName} ${SUBMIT_DIR}" echo "${JobName} ${TargetUsr} ${HostName} ${SUBMIT_DIR}" >> ${SimuCatalog} sort -u ${SimuCatalog} > ${SimuCatalog}.tmp mv ${SimuCatalog}.tmp ${SimuCatalog} elif ( [ ${TargetUsr} == $( gawk -v JobName=${JobName} \ '$1 ~ JobName {print $2}' \ ${SimuCatalog} ) ] \ && [ ${HostName} == $( gawk -v JobName=${JobName} \ '$1 ~ JobName {print $3}' \ ${SimuCatalog} ) ] ) ; then JobName=$( gawk -v JobName=${JobName} '$1 ~ JobName {print $1}' ${SimuCatalog} ) SUBMIT_DIR=$( gawk -v JobName=${JobName} '$1 ~ JobName {print $4}' ${SimuCatalog} ) else echo "${JobName} not in Catalog." exit fi ;; *) break ;; esac return } function AffichResult { fg_first=false fg_last=false fg_job=false while [ $# -ne 0 ] ; do case ${1} in -f|--first) fg_first=true shift 1 ;; -l|--last) fg_last=true shift 1 ;; -j|--job) fg_job=true shift 1 ;; -*) echo "usage: ${0}" echo " options = -f; -l" exit ;; *) break ;; esac done # Define colors # ============= ColEsc="\033[" ColNon="${ColEsc}0m" # Return to normal ColExp="${ColEsc}1m" # Blanc - gras ColFat="${ColEsc}1;31m" # Fatal ColCpl="${ColEsc}1;32m" # Completed ColAtt="${ColEsc}1;30m" # Waiting ColDef="${ColEsc}1;34m" # Default ColRbl="${ColEsc}31m" # Rebuild # Print header # ============ if ( ${fg_first} ) ; then Dum="" (( len = 67 - ${#JobName} )) echo "|===========================================================================================================|" printf "| JobName = ${ColExp}%-${#JobName}s${ColNon}" ${JobName} printf "%-${len}s" ${Dum} printf "run.card : ${ColExp}%-18s${ColNon}|\n" "${LastWrite}" echo "|-------------------------|-------------|-------------------------|-------------|-----:----------:----------|" echo "| | | | | Pending Rebuilds |" echo "| Date Begin - DateEnd | PeriodState | Current Period | CumulPeriod | Nb : from : to |" echo "|-------------------------|-------------|-------------------------|-------------|-----:----------:----------|" printf "| %-10s - %-10s | " \ $DateBegin $DateEnd case $PeriodState in Fatal) Color=${ColFat} ;; Completed) Color=${ColCpl} ;; Waiting|OnQueue) Color=${ColAtt} ;; *) Color=${ColDef} ;; esac printf "${Color}%-11s${ColNon} | " $PeriodState printf "%-10s - %-10s | %11s | " \ $PeriodDateBegin $PeriodDateEnd $CumulPeriod if ( [ X${NbRebuild} != X. ] && [ X${NbRebuild} != X0 ] ) ; then printf "${ColRbl}%3s : %-8s : %-8s${ColNon} |\n" \ $NbRebuild $FirstRebuild $LastRebuild else printf "%3s : %-8s : %-8s |\n" \ $NbRebuild $FirstRebuild $LastRebuild fi if [ ${NbLines} -gt 0 ] ; then printf "|-----------------------------------------------------------------------------------------------------------|\n" printf "| Last |\n" printf "| Rebuild | Pack_Output | Pack_Restart | Pack_Debug | Monitoring | Atlas |\n" printf "|------------------|------------------|------------------|------------------|--------------|----------------|\n" fi return fi # Print Post-processing job status # ================================ if ( ${fg_job} ) ; then printf "|" # Print rebuild and pack jobs # --------------------------- for JobType in ${JobType_list[*]} ; do eval Date=\${${JobType}_Date[${ind}]} eval Status=\${${JobType}_Status[${ind}]} eval Nb=\${${JobType}_Nb[${ind}]} if [ X${Status} == XOK ] ; then Color=${ColCpl} else Color=${ColFat} fi printf " ${Color}%-8s${ColNon} : %3s |" ${Date} ${Nb} done Color=${ColExp} # Print monitoring jobs # --------------------- JobType=monitoring if [ $ind -eq 0 ] ; then eval Date=\${${JobType}_Date} else Date="" fi printf " ${Color}%-4s${ColNon} |" ${Date} # Print atlas jobs # ---------------- JobType=atlas eval Date=\${${JobType}_Date[${ind}]} printf " ${Color}%-12s${ColNon} |" ${Date} printf "\n" return fi # Print footer # ============ if ( ${fg_last} ) ; then printf "|===========================================================================================================|\n" date +"${DateFormat}" return fi } #======================================================================# #D- Task type (computing, post-processing or checking) TaskType=checking typeset -i Verbosity=0 CurrentUsr=$( whoami ) if ( [ $# -eq 0 ] ) ; then $0 -h exit fi # Arguments # ========= # Default argument values # ----------------------- TargetUsr=${CurrentUsr} HostName=$( hostname | sed -e "s/[0-9].*//" ) fg_color=true fg_search=false fg_quiet=false fg_path=false NbHisto=20 # Get arguments from command line # ------------------------------- while [ $# -ne 0 ] ; do case $1 in -h|--help|-help) echo "usage: $0 [-u user] [-q] [-j n] [-s] job_name" echo " $0 [-u user] [-q] [-j n] -p config.card_path" echo "" echo "options :" echo " -h : print this help and exit" echo " -u : owner of the job" echo " -q : quiet" echo " -j : print n post-processing jobs (default is 20)" echo " -s : search for a new job in \$WORKDIR and fill in " echo " the catalog before printing information" echo " -p : give the directory (absolute path) containing " echo " the config.card instead of the job name." exit 0 ;; -j|-job-number) NbHisto="$2" shift 2 ;; -p|-config-path) ConfigPath="$2" fg_path=true shift 2 ;; -q|-quiet) fg_quiet=true shift 1 ;; -s|-search) fg_search=true shift 1 ;; -u|-user) TargetUsr="$2" shift 2 ;; -*) $0 -h exit ;; *) break ;; esac done if ( ( ! ${fg_path} ) && [ $# -lt 1 ] ) ; then $0 -h exit fi if ( ( ${fg_path} ) && ( ${fg_search} ) ) ; then echo "You cannot use -s and -p at the same time" exit fi # Load libIGCM library # ==================== libIGCM=${libIGCM:=::modipsl::/libIGCM} DEBUG_debug=false DEBUG_sys=false . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh . ${libIGCM}/libIGCM_card/libIGCM_card.ksh . ${libIGCM}/libIGCM_date/libIGCM_date.ksh #------- . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh . ${libIGCM}/libIGCM_config/libIGCM_config.ksh #------- ( ${DEBUG_debug} ) && IGCM_debug_Check ( ${DEBUG_debug} ) && IGCM_card_Check ( ${DEBUG_debug} ) && IGCM_date_Check JobName=$1 if ( ${fg_quiet} ) ; then NbHisto=1 fi echo "Target user = ${TargetUsr}" # Define the catalog in which the known simulations are stored SimuCatalog="${HOME}/.simucatalog.dat" if [ ! -s ${SimuCatalog} ] ; then touch ${SimuCatalog} fi # Date format DateFormat="%d/%m/%y %R:%S" # Find SUBMIT_DIR in catalog # ========================== SearchCatalog if [ ! X${SUBMIT_DIR} == X ] ; then echo "Submit: >${SUBMIT_DIR}<" IGCM_sys_Cd $SUBMIT_DIR # Extract usefull information from run.card and config.card # ========================================================= RunFile="${SUBMIT_DIR}/run.card" ConfFile="${SUBMIT_DIR}/config.card" IGCM_config_CommonConfiguration ${SUBMIT_DIR}/config.card if [ -s ${RunFile} ] ; then IGCM_card_DefineVariableFromOption ${RunFile} Configuration PeriodState PeriodState=${run_Configuration_PeriodState} else PeriodState="Waiting" fi if ( [ X${PeriodState} == XRunning ] || [ X${PeriodState} == XOnQueue ] ) ; then #NbRun=$( ccc_mstat -f | grep -c ${JobName} ) IGCM_sys_CountJobInQueue ${JobName} NbRun if [ ${NbRun} -eq 0 ] ; then PeriodState="Fatal" fi fi DateBegin=${config_UserChoices_DateBegin} DateEnd=${config_UserChoices_DateEnd} TagName=${config_UserChoices_TagName} ExperimentName=${config_UserChoices_ExperimentName} SpaceName=${config_UserChoices_SpaceName} if ( [ ! X${PeriodState} == XWaiting ] && [ ! X${PeriodState} == XCompleted ] ) ; then IGCM_card_DefineVariableFromOption ${RunFile} Configuration PeriodDateBegin IGCM_card_DefineVariableFromOption ${RunFile} Configuration PeriodDateEnd IGCM_card_DefineVariableFromOption ${RunFile} Configuration CumulPeriod PeriodDateBegin=${run_Configuration_PeriodDateBegin} PeriodDateEnd=${run_Configuration_PeriodDateEnd} CumulPeriod=${run_Configuration_CumulPeriod} else PeriodDateBegin="." PeriodDateEnd="." CumulPeriod="." fi DATA_DIR=${R_SAVE} POST_DIR=${R_BUFR}/Out CWORK_DIR=${R_FIGR} if [ X${config_Post_RebuildFromArchive} = Xtrue ] ; then RebuildJob="rebuild_fromArchive" else RebuildJob="rebuild_fromWorkdir" fi if [ ${TargetUsr} != ${CurrentUsr} ] ; then DATA_DIR=$( ChangeUsr ${DATA_DIR}) POST_DIR=$( ChangeUsr ${POST_DIR} ) CWORK_DIR=$( ChangeUsr ${CWORK_DIR} ) REBUILD_DIR=$( ChangeUsr ${REBUILD_DIR} ) fi echo "Data: >${DATA_DIR}<" echo "Rebuild: >${REBUILD_DIR}<" echo "Post: >${POST_DIR}<" echo "Work: >${CWORK_DIR}<" # Are packs activated or not ? # ============================ if ( [ ! X${config_Post_PackFrequency} = X${NULL_STR} ] && \ [ ! X${config_Post_PackFrequency} = XNONE ] ) ; then Pack=true else Pack=false fi if [ $PeriodState != "Waiting" ] ; then # Check pending rebuilds # ====================== set -A RebuildList $( find ${REBUILD_DIR}/ -name "REBUILD_*" | sort ) if [ ${#RebuildList[*]} -gt 0 ] ; then NbRebuild=$( IGCM_sys_CountFileArchive ${REBUILD_DIR} ) FirstRebuild=$( basename ${RebuildList[0]} | cut -f2 -d\_ ) LastRebuild=$( basename ${RebuildList[ (( NbRebuild=${NbRebuild}-1 )) ]} | cut -f2 -d\_ ) else NbRebuild="." FirstRebuild="." LastRebuild="." fi else NbRebuild="." FirstRebuild="." LastRebuild="." fi if [ $PeriodState != "Waiting" ] ; then # Check last REBUILD and PACK* jobs # ================================= # Define input parameters # ----------------------- set -A JobType_list "${RebuildJob}" "pack_output" "pack_restart" "pack_debug" for JobType in ${JobType_list[*]} ; do typeset name1="${JobType}_String" typeset name2="${JobType}_Field" typeset name3="${JobType}_Activ" if [ X${JobType} == X${RebuildJob} ] ; then if ( ${Pack} ) ; then eval ${name1}=IGCM_sys_PutBuffer_Out else eval ${name1}=IGCM_sys_Put_Out fi eval ${name2}=4 eval ${name3}=true else eval ${name1}=IGCM_sys_Put_Out eval ${name2}=3 if ( ${Pack} ) ; then eval ${name3}=true else eval ${name3}=false fi fi done # Check jobs # ---------- NbLines=0 for JobType in ${JobType_list[*]} ; do eval String=\${${JobType}_String} eval Field=\${${JobType}_Field} eval Activ=\${${JobType}_Activ} if ( ${Activ} ) ; then set -A FileList $( ls ${POST_DIR}/${JobType}.*.out | tail -n ${NbHisto} ) if [ ${#FileList[*]} -gt ${NbLines} ] ; then NbLines=${#FileList[*]} fi (( ind = 0 )) for FileName in ${FileList[*]} ; do LastDate="" LastDate=$( basename ${FileName} | gawk -F"." '{ print $(NF-1) }' ) set -- $( gawk -v String=${String} \ 'BEGIN { nb_ok = 0 ; nb_ko = 0 } \ ($1 ~ String) { \ if ($3 !~ /error./) { \ nb_ok = nb_ok + 1 \ } else { \ nb_ko = nb_ko + 1 \ } \ } \ END { print nb_ok " " nb_ko }' \ ${POST_DIR}/${JobType}.${LastDate}.out ) Match=$1 Error=$2 (( Nb = ${Match} - ${Error} )) if ( [ ${Error} -eq 0 ] && [ ${Nb} -gt 0 ] ) ; then Status=OK else Status=KO fi eval ${JobType}_Date[$ind]=${LastDate} eval ${JobType}_Status[$ind]=${Status} eval ${JobType}_Nb[$ind]=${Nb} (( ind = ind + 1 )) done else eval ${JobType}_Date[0]="" eval ${JobType}_Status[0]="" eval ${JobType}_Nb[0]="" fi done # Check last MONITORING jobs # ========================== LastDate="" JobType=monitoring IGCM_sys_TestDirArchive ${CWORK_DIR}/MONITORING RC=$? if [ $RC == 0 ] ; then FileTmp=$( IGCM_sys_RshArchive "ls ${CWORK_DIR}/MONITORING/files/*.nc | head -n 1" ) IGCM_sys_GetDate_Monitoring ${FileTmp} LastDate eval ${JobType}_Date=${LastDate} fi # Check last ATLAS jobs # ===================== JobType=atlas IGCM_sys_TestDirArchive ${CWORK_DIR}/ATLAS RC=$? if [ $RC == 0 ] ; then set -A FileList $( IGCM_sys_RshArchive "ls ${CWORK_DIR}/ATLAS | tail -n ${NbHisto}" ) if [ ${#FileList[*]} -gt ${NbLines} ] ; then NbLines=${#FileList[*]} fi (( ind = 0 )) for FileName in ${FileList[*]} ; do eval ${JobType}_Date[$ind]=${FileName} (( ind = ind + 1 )) done fi # Time of last write on run.card # ============================== LastWrite=$( ls -l --time-style=+"${DateFormat}" ${SUBMIT_DIR}/run.card | gawk '{print $6 " " $7}' ) else NbLines=0 fi # Print results # ============= AffichResult -f ind=0 while [ $ind -lt $NbLines ] ; do AffichResult -j (( ind = ind + 1 )) done AffichResult -l fi