source: tags/libIGCM_v2.0_rc3/AA_additionnal

#-Q- curie ######################
#-Q- curie ## CURIE   TGCC/CEA ##
#-Q- curie ######################
#-Q- curie #MSUB -r ATL_ADD        # Nom du job               
#-Q- curie #MSUB -eo
#-Q- curie #MSUB -n 1              # Reservation du processus
#-Q- curie #MSUB -T 86400          # Limite de temps elapsed du job
#-Q- curie #MSUB -q xlarge
#-Q- curie #MSUB -Q normal
#-Q- curie set +x
#-Q- ada #!/bin/ksh
#-Q- ada #######################
#-Q- ada ##   ADA   IDRIS  ##
#-Q- ada #######################
#-Q- ada # Temps Elapsed max. d'une requete hh:mm:ss
#-Q- ada # @ wall_clock_limit = 1:00:00
#-Q- ada # Nom du travail LoadLeveler
#-Q- ada # @ job_name   = ATL_ADD
#-Q- ada # Fichier de sortie standard du travail   
#-Q- ada # @ output     = $(job_name).$(jobid)
#-Q- ada # Fichier de sortie d'erreur du travail
#-Q- ada # @ error      =  $(job_name).$(jobid)
#-Q- ada # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
#-Q- ada # @ notification = error
#-Q- ada # @ environment  = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER
#-Q- ada # @ queue
#-Q- sx9mercure #!/bin/ksh
#-Q- sx9mercure ######################
#-Q- sx9mercure ## SX9MERCURE  CCRT ##
#-Q- sx9mercure ######################
#-Q- sx9mercure #PBS -N  ATL_ADD            # Nom du job
#-Q- sx9mercure #PBS -j o                   # regroupement des stdout et stderr
#-Q- sx9mercure #PBS -S /usr/bin/ksh        # shell de soumission
#-Q- sx9mercure #PBS -l memsz_job=1gb       # Limite memoire a 1 Go
#-Q- sx9mercure #PBS -l elapstim_req=2:00:00  # Limite temps a 2 heures
#-Q- sx9mercure #PBS -q scalaire
#-Q- sx9mercure #PBS -r n
#-Q- titane #!/bin/ksh
#-Q- titane ######################
#-Q- titane ## TITANE   CEA ##
#-Q- titane ######################
#-Q- titane #MSUB -r ATL_ADD        # Nom du job
#-Q- titane #MSUB -eo
#-Q- titane #MSUB -n 1              # Reservation du processus
#-Q- titane #MSUB -T 86400          # Limite de temps elapsed du job
#-Q- titane #MSUB -q mono
#-Q- titane #MSUB -E '-rn'
#-Q- default #!/bin/ksh
#-Q- default ##################
#-Q- default ## DEFAULT HOST ##
#-Q- default ##################

#**************************************************************
# Author: Sebastien Denvil
# Contact: Sebastien.Denvil__at__ipsl.jussieu.fr
# $Revision::                                          $ Revision of last commit
# $Author::                                            $ Author of last commit
# $Date::                                              $ Date of last commit
# IPSL (2006)
#  This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
#
#**************************************************************

#set -eu
#set -vx

date

#-Q- ada export OMP_NUM_THREADS=1

#D- Task type (computing or post-processing)
TaskType=post-processing 

#########################################################################

. ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh
      ( ${DEBUG_debug} ) && IGCM_debug_Check
. ${libIGCM}/libIGCM_card/libIGCM_card.ksh
     ( ${DEBUG_debug} ) && IGCM_card_Check
. ${libIGCM}/libIGCM_date/libIGCM_date.ksh
     ( ${DEBUG_debug} ) && IGCM_date_Check
#-------
. ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh
. ${libIGCM}/libIGCM_config/libIGCM_config.ksh

#######################################################################

#set -vx

#===========================================
R_ATLAS=ATLAS/SE_${YEARS}
R_OUT_OCE=${R_SAVE}/OCE

RUN_DIR=${RUN_DIR_PATH}/ATLAS_ADD_${YEARS}
IGCM_sys_MkdirWork ${RUN_DIR}
IGCM_sys_Cd ${RUN_DIR}

# ------------------------------------------------------------------
# Test if all was right before proceeding further
# ------------------------------------------------------------------
IGCM_debug_Verif_Exit_Post

# --------------------------------------------
# Insert your commands between III...III lines 
# and precise produced directories to save
# IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII

IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_T.nc ${RUN_DIR}/SE_grid_T.nc
IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_U.nc ${RUN_DIR}/SE_grid_U.nc
IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_V.nc ${RUN_DIR}/SE_grid_V.nc
IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_W.nc ${RUN_DIR}/SE_grid_W.nc

atlas -o ${RUN_DIR}/${R_ATLAS}/ADD -p landscape=true,angle=-90,nup=1x1 ${FER_ATLAS}/atlas_p_ORCA2_add_*.cfg ${config_UserChoices_JobName}

# IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII

# Put ferret journal files together
for file in $( ls ${R_ATLAS}/ADD/*/*jnl ) ; do  
    echo -e "\n\n################################" ; 
    echo -e "$file\n" ; cat $file ; 
done  > ${R_ATLAS}/ADD/allferretscript.txt

# Clear some files
find . \( -name "*.stdout" -o -name "*.jnl" \) -print -exec rm -f {} \;

# Save files
IGCM_sys_Put_Dir ATLAS ${R_SAVE}

IGCM_sys_Rm -Rf ATLAS
IGCM_sys_Rm -f SE_grid_?.nc

# DODS copy
IGCM_sys_TestDirArchive ${R_SAVE}/${R_ATLAS}
[ $? = 0 ] && IGCM_sys_Put_Dods ${R_ATLAS}