[622] | 1 | #-Q- curie ###################### |
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| 2 | #-Q- curie ## CURIE TGCC/CEA ## |
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| 3 | #-Q- curie ###################### |
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[906] | 4 | #-Q- curie #MSUB -r ATL_ADD # Nom du job |
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[622] | 5 | #-Q- curie #MSUB -eo |
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| 6 | #-Q- curie #MSUB -n 1 # Reservation du processus |
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[880] | 7 | #-Q- curie #MSUB -T 7200 # Limite de temps elapsed du job |
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[741] | 8 | #-Q- curie #MSUB -q xlarge |
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[704] | 9 | #-Q- curie #MSUB -Q normal |
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[837] | 10 | #-Q- curie #MSUB -A ::default_project:: |
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[681] | 11 | #-Q- curie set +x |
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[770] | 12 | #-Q- ada #!/bin/ksh |
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| 13 | #-Q- ada ####################### |
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[929] | 14 | #-Q- ada ## ADA IDRIS ## |
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[770] | 15 | #-Q- ada ####################### |
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[848] | 16 | #-Q- ada # @ job_type = serial |
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| 17 | #-Q- ada # @ requirements = (Feature == "prepost") |
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[770] | 18 | #-Q- ada # Temps Elapsed max. d'une requete hh:mm:ss |
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| 19 | #-Q- ada # @ wall_clock_limit = 1:00:00 |
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| 20 | #-Q- ada # Nom du travail LoadLeveler |
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| 21 | #-Q- ada # @ job_name = ATL_ADD |
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[906] | 22 | #-Q- ada # Fichier de sortie standard du travail |
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[770] | 23 | #-Q- ada # @ output = $(job_name).$(jobid) |
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| 24 | #-Q- ada # Fichier de sortie d'erreur du travail |
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| 25 | #-Q- ada # @ error = $(job_name).$(jobid) |
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| 26 | #-Q- ada # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
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| 27 | #-Q- ada # @ notification = error |
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[1070] | 28 | #-Q- ada # @ environment = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $DEBUG_debug ; $BigBrother ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER |
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[770] | 29 | #-Q- ada # @ queue |
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[929] | 30 | #-Q- lxiv8 ###################### |
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| 31 | #-Q- lxiv8 ## OBELIX LSCE ## |
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| 32 | #-Q- lxiv8 ###################### |
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| 33 | #-Q- lxiv8 #PBS -N ATL_ADD |
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| 34 | #-Q- lxiv8 #PBS -m a |
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| 35 | #-Q- lxiv8 #PBS -j oe |
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| 36 | #-Q- lxiv8 #PBS -q test |
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| 37 | #-Q- lxiv8 #PBS -o ATL_ADD.$$ |
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| 38 | #-Q- lxiv8 #PBS -S /bin/ksh |
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[2] | 39 | #-Q- default #!/bin/ksh |
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| 40 | #-Q- default ################## |
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| 41 | #-Q- default ## DEFAULT HOST ## |
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| 42 | #-Q- default ################## |
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| 43 | |
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[373] | 44 | #************************************************************** |
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| 45 | # Author: Sebastien Denvil |
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| 46 | # Contact: Sebastien.Denvil__at__ipsl.jussieu.fr |
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| 47 | # $Revision:: $ Revision of last commit |
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| 48 | # $Author:: $ Author of last commit |
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| 49 | # $Date:: $ Date of last commit |
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[2] | 50 | # IPSL (2006) |
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| 51 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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[373] | 52 | # |
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| 53 | #************************************************************** |
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[2] | 54 | |
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[108] | 55 | #set -eu |
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| 56 | #set -vx |
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| 57 | |
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[2] | 58 | date |
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| 59 | |
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[770] | 60 | #-Q- ada export OMP_NUM_THREADS=1 |
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[2] | 61 | |
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[712] | 62 | #D- Task type (computing or post-processing) |
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[906] | 63 | TaskType=post-processing |
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[712] | 64 | |
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[2] | 65 | ######################################################################### |
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| 66 | |
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[108] | 67 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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| 68 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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| 69 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
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| 70 | #------- |
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| 71 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
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[731] | 72 | . ${libIGCM}/libIGCM_config/libIGCM_config.ksh |
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[832] | 73 | #------- |
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| 74 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
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| 75 | ( ${DEBUG_debug} ) && IGCM_card_Check |
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| 76 | ( ${DEBUG_debug} ) && IGCM_date_Check |
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[2] | 77 | |
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| 78 | ####################################################################### |
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| 79 | |
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| 80 | #set -vx |
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| 81 | |
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[108] | 82 | #=========================================== |
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[2] | 83 | R_ATLAS=ATLAS/SE_${YEARS} |
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| 84 | R_OUT_OCE=${R_SAVE}/OCE |
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| 85 | |
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[34] | 86 | RUN_DIR=${RUN_DIR_PATH}/ATLAS_ADD_${YEARS} |
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| 87 | IGCM_sys_MkdirWork ${RUN_DIR} |
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| 88 | IGCM_sys_Cd ${RUN_DIR} |
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[2] | 89 | |
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[436] | 90 | # ------------------------------------------------------------------ |
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| 91 | # Test if all was right before proceeding further |
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| 92 | # ------------------------------------------------------------------ |
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| 93 | IGCM_debug_Verif_Exit_Post |
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| 94 | |
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[2] | 95 | # -------------------------------------------- |
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[906] | 96 | # Insert your commands between III...III lines |
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[2] | 97 | # and precise produced directories to save |
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| 98 | # IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII |
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| 99 | |
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[34] | 100 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_T.nc ${RUN_DIR}/SE_grid_T.nc |
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| 101 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_U.nc ${RUN_DIR}/SE_grid_U.nc |
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| 102 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_V.nc ${RUN_DIR}/SE_grid_V.nc |
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| 103 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_W.nc ${RUN_DIR}/SE_grid_W.nc |
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[2] | 104 | |
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[34] | 105 | atlas -o ${RUN_DIR}/${R_ATLAS}/ADD -p landscape=true,angle=-90,nup=1x1 ${FER_ATLAS}/atlas_p_ORCA2_add_*.cfg ${config_UserChoices_JobName} |
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[2] | 106 | |
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| 107 | # IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII |
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| 108 | |
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| 109 | # Put ferret journal files together |
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[906] | 110 | for file in $( ls ${R_ATLAS}/ADD/*/*jnl ) ; do |
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| 111 | echo -e "\n\n################################" ; |
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| 112 | echo -e "$file\n" ; cat $file ; |
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[2] | 113 | done > ${R_ATLAS}/ADD/allferretscript.txt |
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| 114 | |
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| 115 | # Clear some files |
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| 116 | find . \( -name "*.stdout" -o -name "*.jnl" \) -print -exec rm -f {} \; |
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| 117 | |
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| 118 | # Save files |
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| 119 | IGCM_sys_Put_Dir ATLAS ${R_SAVE} |
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| 120 | |
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| 121 | IGCM_sys_Rm -Rf ATLAS |
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| 122 | IGCM_sys_Rm -f SE_grid_?.nc |
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| 123 | |
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| 124 | # DODS copy |
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[67] | 125 | IGCM_sys_TestDirArchive ${R_SAVE}/${R_ATLAS} |
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| 126 | [ $? = 0 ] && IGCM_sys_Put_Dods ${R_ATLAS} |
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