source: trunk/libIGCM/AA_additionnal @ 191

Last change on this file since 191 was 178, checked in by cetlod, 15 years ago

Add RESOL_MBG (Marine BioGeochemistry?) for use with TOP component

  • Property licence set to
    The following licence information concerns ONLY the libIGCM tools
    ==================================================================

    Copyright © Centre National de la Recherche Scientifique CNRS
    Commissariat à l'Énergie Atomique CEA

    libIGCM : Library for Portable Models Computation of IGCM Group.

    IGCM Group is the french IPSL Global Climate Model Group.

    This library is a set of shell scripts and functions whose purpose is
    the management of the initialization, the launch, the transfer of
    output files, the post-processing and the monitoring of datas produce
    by any numerical program on any plateforme.

    This software is governed by the CeCILL license under French law and
    abiding by the rules of distribution of free software. You can use,
    modify and/ or redistribute the software under the terms of the CeCILL
    license as circulated by CEA, CNRS and INRIA at the following URL
    "http://www.cecill.info".

    As a counterpart to the access to the source code and rights to copy,
    modify and redistribute granted by the license, users are provided only
    with a limited warranty and the software's author, the holder of the
    economic rights, and the successive licensors have only limited
    liability.

    In this respect, the user's attention is drawn to the risks associated
    with loading, using, modifying and/or developing or reproducing the
    software by the user in light of its specific status of free software,
    that may mean that it is complicated to manipulate, and that also
    therefore means that it is reserved for developers and experienced
    professionals having in-depth computer knowledge. Users are therefore
    encouraged to load and test the software's suitability as regards their
    requirements in conditions enabling the security of their systems and/or
    data to be ensured and, more generally, to use and operate it in the
    same conditions as regards security.

    The fact that you are presently reading this means that you have had
    knowledge of the CeCILL license and that you accept its terms.
  • Property svn:keywords set to Date Author Revision
File size: 5.6 KB
RevLine 
[2]1#-Q- platine #!/usr/bin/ksh
2#-Q- platine ##################
3#-Q- platine ## PLATINE   CEA ##
4#-Q- platine ##################
[15]5#-Q- platine #BSUB -J ATL_ADD           # Nom du job
[2]6#-Q- platine #BSUB -N                   # message a la fin du job
7#-Q- platine #BSUB -n 1                 # reservation des processeurs pour le job
8#-Q- platine #BSUB -W 1:00              # Limite temps
[18]9#-Q- platine #BSUB -q post              # Passage en queue post
[59]10#-Q- sx8brodie #!/bin/ksh
[2]11#-Q- sx8brodie #######################
12#-Q- sx8brodie ## SX8BRODIE   IDRIS ##
13#-Q- sx8brodie #######################
[58]14#-Q- sx8brodie # Temps Elapsed max. d'une requete hh:mm:ss
15#-Q- sx8brodie # @ wall_clock_limit = 10:00:00
16#-Q- sx8brodie # Nom du travail LoadLeveler
[60]17#-Q- sx8brodie # @ job_name   = ATL_ADD
[58]18#-Q- sx8brodie # Fichier de sortie standard du travail       
19#-Q- sx8brodie # @ output     = $(job_name).$(jobid)
20#-Q- sx8brodie # Fichier de sortie d'erreur du travail
21#-Q- sx8brodie # @ error      =  $(job_name).$(jobid)
22#-Q- sx8brodie # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
23#-Q- sx8brodie # @ notification = error
[178]24#-Q- sx8brodie # @ environment  = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER
[58]25#-Q- sx8brodie # @ queue
[68]26#-Q- aix6 #!/bin/ksh
27#-Q- aix6 #######################
28#-Q- aix6 ##   VARGAS   IDRIS  ##
29#-Q- aix6 #######################
30#-Q- aix6 # Temps Elapsed max. d'une requete hh:mm:ss
31#-Q- aix6 # @ wall_clock_limit = 10:00:00
32#-Q- aix6 # Nom du travail LoadLeveler
33#-Q- aix6 # @ job_name   = ATL_ADD
[108]34#-Q- aix6 # Fichier de sortie standard du travail   
[68]35#-Q- aix6 # @ output     = $(job_name).$(jobid)
36#-Q- aix6 # Fichier de sortie d'erreur du travail
37#-Q- aix6 # @ error      =  $(job_name).$(jobid)
38#-Q- aix6 # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
39#-Q- aix6 # @ notification = error
[178]40#-Q- aix6 # @ environment  = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER
[68]41#-Q- aix6 # @ queue
[2]42#-Q- sx8mercure #!/bin/ksh
43#-Q- sx8mercure ######################
44#-Q- sx8mercure ## SX8MERCURE   CEA ##
45#-Q- sx8mercure ######################
[15]46#-Q- sx8mercure #PBS -N  ATL_ADD            # Nom du job
[2]47#-Q- sx8mercure #PBS -j o                   # regroupement des stdout et stderr
48#-Q- sx8mercure #PBS -S /usr/bin/ksh        # shell de soumission
49#-Q- sx8mercure #PBS -l memsz_job=1gb       # Limite memoire a 1 Go
50#-Q- sx8mercure #PBS -l cputim_job=2:00:00  # Limite temps a 2 heures
51#-Q- sx8mercure #PBS -q scalaire
[172]52#-Q- sx9mercure #!/bin/ksh
53#-Q- sx9mercure ######################
54#-Q- sx9mercure ## SX9MERCURE   CEA ##
55#-Q- sx9mercure ######################
56#-Q- sx9mercure #PBS -N  ATL_ADD            # Nom du job
57#-Q- sx9mercure #PBS -j o                   # regroupement des stdout et stderr
58#-Q- sx9mercure #PBS -S /usr/bin/ksh        # shell de soumission
59#-Q- sx9mercure #PBS -l memsz_job=1gb       # Limite memoire a 1 Go
60#-Q- sx9mercure #PBS -l cputim_job=2:00:00  # Limite temps a 2 heures
61#-Q- sx9mercure #PBS -q scalaire
[2]62#-Q- default #!/bin/ksh
63#-Q- default ##################
64#-Q- default ## DEFAULT HOST ##
65#-Q- default ##################
66
[4]67# $Date$
[5]68# $Author$
69# $Revision$
[2]70# IPSL (2006)
71#  This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
72
[108]73#set -eu
74#set -vx
75
[2]76date
77
78#-Q- sx8brodie export OMP_NUM_THREADS=1
[68]79#-Q- aix6 export OMP_NUM_THREADS=1
[2]80
81#########################################################################
82
[108]83. ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh
84      ( ${DEBUG_debug} ) && IGCM_debug_Check
85. ${libIGCM}/libIGCM_card/libIGCM_card.ksh
86     ( ${DEBUG_debug} ) && IGCM_card_Check
87. ${libIGCM}/libIGCM_date/libIGCM_date.ksh
88     ( ${DEBUG_debug} ) && IGCM_date_Check
89#-------
90. ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh
[2]91
92#######################################################################
93
94#set -vx
95
[108]96#===========================================
[2]97R_ATLAS=ATLAS/SE_${YEARS}
98R_OUT_OCE=${R_SAVE}/OCE
99
[34]100RUN_DIR=${RUN_DIR_PATH}/ATLAS_ADD_${YEARS}
101IGCM_sys_MkdirWork ${RUN_DIR}
102IGCM_sys_Cd ${RUN_DIR}
[2]103
104# --------------------------------------------
105# Insert your commands between III...III lines
106# and precise produced directories to save
107# IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
108
[34]109IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_T.nc ${RUN_DIR}/SE_grid_T.nc
110IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_U.nc ${RUN_DIR}/SE_grid_U.nc
111IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_V.nc ${RUN_DIR}/SE_grid_V.nc
112IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_W.nc ${RUN_DIR}/SE_grid_W.nc
[2]113
[34]114atlas -o ${RUN_DIR}/${R_ATLAS}/ADD -p landscape=true,angle=-90,nup=1x1 ${FER_ATLAS}/atlas_p_ORCA2_add_*.cfg ${config_UserChoices_JobName}
[2]115
116# IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
117
118# Put ferret journal files together
119for file in $( ls ${R_ATLAS}/ADD/*/*jnl ) ; do 
120    echo -e "\n\n################################" ;
121    echo -e "$file\n" ; cat $file ;
122done  > ${R_ATLAS}/ADD/allferretscript.txt
123
124# Clear some files
125find . \( -name "*.stdout" -o -name "*.jnl" \) -print -exec rm -f {} \;
126
127# Save files
128IGCM_sys_Put_Dir ATLAS ${R_SAVE}
129
130IGCM_sys_Rm -Rf ATLAS
131IGCM_sys_Rm -f SE_grid_?.nc
132
133# DODS copy
[67]134IGCM_sys_TestDirArchive ${R_SAVE}/${R_ATLAS}
135[ $? = 0 ] && IGCM_sys_Put_Dods ${R_ATLAS}
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