[314] | 1 | #-Q- cesium #!/bin/ksh |
---|
| 2 | #-Q- cesium ###################### |
---|
| 3 | #-Q- cesium ## CESIUM CEA ## |
---|
| 4 | #-Q- cesium ###################### |
---|
| 5 | #-Q- cesium #MSUB -r ATL_OPA # Nom du job |
---|
| 6 | #-Q- cesium #MSUB -N 1 # Reservation du noeud |
---|
| 7 | #-Q- cesium #MSUB -n 1 # Reservation du processus |
---|
| 8 | #-Q- cesium #MSUB -T 86400 # Limite de temps elapsed du job |
---|
| 9 | #-Q- cesium #MSUB -E "-j o" |
---|
| 10 | #-Q- cesium #MSUB -E "-S /bin/ksh" |
---|
[622] | 11 | #-Q- curie ###################### |
---|
| 12 | #-Q- curie ## CURIE TGCC/CEA ## |
---|
| 13 | #-Q- curie ###################### |
---|
[626] | 14 | #-Q- curie #MSUB -r ATL_OPA # Nom du job |
---|
[622] | 15 | #-Q- curie #MSUB -eo |
---|
| 16 | #-Q- curie #MSUB -n 1 # Reservation du processus |
---|
| 17 | #-Q- curie #MSUB -T 86400 # Limite de temps elapsed du job |
---|
[643] | 18 | #-Q- curie #MSUB -E '--no-requeue' |
---|
[2] | 19 | #-Q- platine #!/usr/bin/ksh |
---|
| 20 | #-Q- platine ################## |
---|
| 21 | #-Q- platine ## PLATINE CEA ## |
---|
| 22 | #-Q- platine ################## |
---|
| 23 | #-Q- platine #BSUB -J ATL_OPA # Nom du job |
---|
| 24 | #-Q- platine #BSUB -N # message a la fin du job |
---|
| 25 | #-Q- platine #BSUB -n 1 # reservation des processeurs pour le job |
---|
| 26 | #-Q- platine #BSUB -W 1:00 # Limite temps |
---|
[18] | 27 | #-Q- platine #BSUB -q post # Passage en queue post |
---|
[426] | 28 | #-Q- platine #BSUB -L /bin/ksh |
---|
[59] | 29 | #-Q- sx8brodie #!/bin/ksh |
---|
[2] | 30 | #-Q- sx8brodie ####################### |
---|
| 31 | #-Q- sx8brodie ## SX8BRODIE IDRIS ## |
---|
| 32 | #-Q- sx8brodie ####################### |
---|
[58] | 33 | #-Q- sx8brodie # Temps Elapsed max. d'une requete hh:mm:ss |
---|
[518] | 34 | #-Q- sx8brodie # @ wall_clock_limit = 2:00:00 |
---|
[58] | 35 | #-Q- sx8brodie # Nom du travail LoadLeveler |
---|
[60] | 36 | #-Q- sx8brodie # @ job_name = ATL_OPA |
---|
[58] | 37 | #-Q- sx8brodie # Fichier de sortie standard du travail |
---|
| 38 | #-Q- sx8brodie # @ output = $(job_name).$(jobid) |
---|
| 39 | #-Q- sx8brodie # Fichier de sortie d'erreur du travail |
---|
| 40 | #-Q- sx8brodie # @ error = $(job_name).$(jobid) |
---|
| 41 | #-Q- sx8brodie # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
---|
| 42 | #-Q- sx8brodie # @ notification = error |
---|
[370] | 43 | #-Q- sx8brodie # @ environment = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $DIR_OUT ; $MASTER ; $libIGCM_SX |
---|
[58] | 44 | #-Q- sx8brodie # @ queue |
---|
[68] | 45 | #-Q- aix6 #!/bin/ksh |
---|
| 46 | #-Q- aix6 ####################### |
---|
| 47 | #-Q- aix6 ## VARGAS IDRIS ## |
---|
| 48 | #-Q- aix6 ####################### |
---|
| 49 | #-Q- aix6 # Temps Elapsed max. d'une requete hh:mm:ss |
---|
[518] | 50 | #-Q- aix6 # @ wall_clock_limit = 2:00:00 |
---|
[68] | 51 | #-Q- aix6 # Nom du travail LoadLeveler |
---|
| 52 | #-Q- aix6 # @ job_name = ATL_OPA |
---|
| 53 | #-Q- aix6 # Fichier de sortie standard du travail |
---|
| 54 | #-Q- aix6 # @ output = $(job_name).$(jobid) |
---|
| 55 | #-Q- aix6 # Fichier de sortie d'erreur du travail |
---|
| 56 | #-Q- aix6 # @ error = $(job_name).$(jobid) |
---|
| 57 | #-Q- aix6 # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
---|
| 58 | #-Q- aix6 # @ notification = error |
---|
[370] | 59 | #-Q- aix6 # @ environment = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $DIR_OUT ; $MASTER ; $libIGCM_SX |
---|
[68] | 60 | #-Q- aix6 # @ queue |
---|
[386] | 61 | #-Q- ulam #!/bin/ksh |
---|
| 62 | #-Q- ulam ####################### |
---|
| 63 | #-Q- ulam ## ULAM IDRIS ## |
---|
| 64 | #-Q- ulam ####################### |
---|
| 65 | #-Q- ulam # Temps Elapsed max. d'une requete hh:mm:ss |
---|
[518] | 66 | #-Q- ulam # @ wall_clock_limit = 2:00:00 |
---|
[386] | 67 | #-Q- ulam # Nom du travail LoadLeveler |
---|
| 68 | #-Q- ulam # @ job_name = ATL_OPA |
---|
| 69 | #-Q- ulam # Fichier de sortie standard du travail |
---|
| 70 | #-Q- ulam # @ output = $(job_name).$(jobid) |
---|
| 71 | #-Q- ulam # Fichier de sortie d'erreur du travail |
---|
| 72 | #-Q- ulam # @ error = $(job_name).$(jobid) |
---|
| 73 | #-Q- ulam # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
---|
| 74 | #-Q- ulam # @ notification = error |
---|
| 75 | #-Q- ulam # @ environment = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $DIR_OUT ; $MASTER ; $libIGCM_SX |
---|
| 76 | #-Q- ulam # @ queue |
---|
[2] | 77 | #-Q- sx8mercure #!/bin/ksh |
---|
| 78 | #-Q- sx8mercure ###################### |
---|
| 79 | #-Q- sx8mercure ## SX8MERCURE CEA ## |
---|
| 80 | #-Q- sx8mercure ###################### |
---|
| 81 | #-Q- sx8mercure #PBS -N ATL_OPA # Nom du job |
---|
| 82 | #-Q- sx8mercure #PBS -j o # regroupement des stdout et stderr |
---|
| 83 | #-Q- sx8mercure #PBS -S /usr/bin/ksh # shell de soumission |
---|
| 84 | #-Q- sx8mercure #PBS -l memsz_job=1gb # Limite memoire a 1 Go |
---|
| 85 | #-Q- sx8mercure #PBS -l cputim_job=2:00:00 # Limite temps a 2 heures |
---|
[299] | 86 | #-Q- sx8mercure #PBS -q scalaire |
---|
[640] | 87 | #-Q- sx8mercure #PBS -r n |
---|
[172] | 88 | #-Q- sx9mercure #!/bin/ksh |
---|
[616] | 89 | #-Q- sx9mercure ###################### |
---|
| 90 | #-Q- sx9mercure ## SX9MERCURE CCRT ## |
---|
| 91 | #-Q- sx9mercure ###################### |
---|
| 92 | #-Q- sx9mercure #PBS -N ATL_OPA # Nom du job |
---|
| 93 | #-Q- sx9mercure #PBS -j o # regroupement des stdout et stderr |
---|
| 94 | #-Q- sx9mercure #PBS -S /usr/bin/ksh # shell de soumission |
---|
| 95 | #-Q- sx9mercure #PBS -l memsz_job=1gb # Limite memoire a 1 Go |
---|
| 96 | #-Q- sx9mercure #PBS -l elapstim_req=2:00:00 # Limite temps a 2 heures |
---|
| 97 | #-Q- sx9mercure #PBS -q scalaire |
---|
[640] | 98 | #-Q- sx9mercure #PBS -r n |
---|
[222] | 99 | #-Q- titane #!/bin/ksh |
---|
| 100 | #-Q- titane ###################### |
---|
| 101 | #-Q- titane ## TITANE CEA ## |
---|
| 102 | #-Q- titane ###################### |
---|
| 103 | #-Q- titane #MSUB -r ATL_OPA # Nom du job |
---|
[544] | 104 | #-Q- titane #MSUB -eo |
---|
[222] | 105 | #-Q- titane #MSUB -n 1 # Reservation du processus |
---|
| 106 | #-Q- titane #MSUB -T 86400 # Limite de temps elapsed du job |
---|
[544] | 107 | #-Q- titane #MSUB -q mono |
---|
[643] | 108 | #-Q- titane #MSUB -E '-rn' |
---|
[2] | 109 | #-Q- default #!/bin/ksh |
---|
| 110 | #-Q- default ################## |
---|
| 111 | #-Q- default ## DEFAULT HOST ## |
---|
| 112 | #-Q- default ################## |
---|
| 113 | |
---|
[373] | 114 | #************************************************************** |
---|
| 115 | # Author: Sebastien Denvil |
---|
| 116 | # Contact: Sebastien.Denvil__at__ipsl.jussieu.fr |
---|
| 117 | # $Revision:: $ Revision of last commit |
---|
| 118 | # $Author:: $ Author of last commit |
---|
| 119 | # $Date:: $ Date of last commit |
---|
[2] | 120 | # IPSL (2006) |
---|
| 121 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
---|
[373] | 122 | # |
---|
| 123 | #************************************************************** |
---|
[2] | 124 | |
---|
[108] | 125 | #set -eu |
---|
[2] | 126 | #set -vx |
---|
| 127 | |
---|
| 128 | date |
---|
| 129 | |
---|
| 130 | #-Q- sx8brodie export OMP_NUM_THREADS=1 |
---|
[108] | 131 | #-Q- aix6 export OMP_NUM_THREADS=1 |
---|
[386] | 132 | #-Q- ulam export OMP_NUM_THREADS=1 |
---|
[2] | 133 | |
---|
| 134 | ######################################################################## |
---|
| 135 | |
---|
[108] | 136 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
---|
| 137 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
---|
| 138 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
---|
| 139 | ( ${DEBUG_debug} ) && IGCM_card_Check |
---|
| 140 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
---|
| 141 | ( ${DEBUG_debug} ) && IGCM_date_Check |
---|
| 142 | #------- |
---|
| 143 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
---|
[2] | 144 | |
---|
| 145 | ######################################################################## |
---|
| 146 | |
---|
| 147 | #set -vx |
---|
| 148 | |
---|
[263] | 149 | IGCM_sys_MkdirWork ${RUN_DIR_PATH} |
---|
| 150 | IGCM_sys_Cd ${RUN_DIR_PATH} |
---|
| 151 | |
---|
[436] | 152 | # ------------------------------------------------------------------ |
---|
| 153 | # Test if all was right before proceeding further |
---|
| 154 | # ------------------------------------------------------------------ |
---|
| 155 | IGCM_debug_Verif_Exit_Post |
---|
| 156 | |
---|
[263] | 157 | if [ ${StandAlone} = true ] ; then |
---|
| 158 | CARD_DIR=${SUBMIT_DIR} |
---|
| 159 | else |
---|
[647] | 160 | CARD_DIR=${RUN_DIR_PATH} |
---|
[640] | 161 | IGCM_sys_Get_Master ${SUBMIT_DIR}/config.card ${RUN_DIR_PATH} |
---|
| 162 | IGCM_sys_Get_Master ${SUBMIT_DIR}/run.card ${RUN_DIR_PATH} |
---|
| 163 | IGCM_sys_Get_Master ${SUBMIT_DIR}/COMP ${RUN_DIR_PATH} |
---|
| 164 | IGCM_sys_Get_Master ${SUBMIT_DIR}/POST ${RUN_DIR_PATH} |
---|
| 165 | |
---|
[263] | 166 | fi |
---|
| 167 | # |
---|
| 168 | # First of all |
---|
| 169 | # |
---|
| 170 | IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card UserChoices |
---|
| 171 | typeset option |
---|
| 172 | for option in ${config_UserChoices[*]} ; do |
---|
| 173 | IGCM_card_DefineVariableFromOption ${CARD_DIR}/config.card UserChoices ${option} |
---|
| 174 | done |
---|
[658] | 175 | |
---|
| 176 | IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card Ensemble |
---|
| 177 | typeset option |
---|
| 178 | for option in ${config_Ensemble[*]} ; do |
---|
| 179 | IGCM_card_DefineVariableFromOption ${CARD_DIR}/config.card Ensemble ${option} |
---|
| 180 | done |
---|
[263] | 181 | # |
---|
| 182 | echo |
---|
| 183 | IGCM_debug_Print 1 "DefineArrayFromOption : config_UserChoices" |
---|
| 184 | IGCM_debug_PrintVariables 3 config_UserChoices_JobName |
---|
| 185 | IGCM_debug_PrintVariables 3 config_UserChoices_LongName |
---|
| 186 | IGCM_debug_PrintVariables 3 config_UserChoices_TagName |
---|
| 187 | IGCM_debug_PrintVariables 3 config_UserChoices_SpaceName |
---|
| 188 | IGCM_debug_PrintVariables 3 config_UserChoices_ExperimentName |
---|
| 189 | IGCM_debug_PrintVariables 3 config_UserChoices_CalendarType |
---|
| 190 | IGCM_debug_PrintVariables 3 config_UserChoices_DateBegin |
---|
| 191 | IGCM_debug_PrintVariables 3 config_UserChoices_DateEnd |
---|
| 192 | IGCM_debug_PrintVariables 3 config_UserChoices_PeriodLength |
---|
[658] | 193 | IGCM_debug_PrintVariables 3 config_Ensemble_EnsembleName |
---|
| 194 | IGCM_debug_PrintVariables 3 config_Ensemble_EnsembleDate |
---|
[263] | 195 | echo |
---|
| 196 | |
---|
| 197 | #================================== |
---|
| 198 | #R_SAVE : Job output directory |
---|
[546] | 199 | #R_BUFR : Job output buffered directory |
---|
[263] | 200 | if ( [ ! X${config_UserChoices_SpaceName} = X ] && [ ! X${config_UserChoices_ExperimentName} = X ] ) ; then |
---|
[658] | 201 | FreeName=$( echo ${config_UserChoices_JobName} | sed 's/.*_//' ) |
---|
| 202 | if ( [ ! X${config_Ensemble_EnsembleName} = X ] && [ ! X${config_Ensemble_EnsembleDate} = X ] ) ; then |
---|
| 203 | R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${config_Ensemble_EnsembleName}/${config_Ensemble_EnsembleDate}/${FreeName} |
---|
| 204 | R_FIGR=${R_FIG}/${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${config_Ensemble_EnsembleName}/${config_Ensemble_EnsembleDate}/${FreeName} |
---|
| 205 | R_BUFR=${R_BUF}/${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${config_Ensemble_EnsembleName}/${config_Ensemble_EnsembleDate}/${FreeName} |
---|
| 206 | R_DODS=${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${config_Ensemble_EnsembleName}/${config_Ensemble_EnsembleDate}/${FreeName} |
---|
| 207 | else |
---|
[263] | 208 | R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName} |
---|
[587] | 209 | R_FIGR=${R_FIG}/${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName} |
---|
[546] | 210 | R_BUFR=${R_BUF}/${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName} |
---|
[263] | 211 | R_DODS=${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName} |
---|
[658] | 212 | fi |
---|
[263] | 213 | else |
---|
[658] | 214 | if ( [ ! X${config_Ensemble_EnsembleName} = X ] && [ ! X${config_Ensemble_EnsembleDate} = X ] ) ; then |
---|
| 215 | R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_Ensemble_EnsembleName}/${config_Ensemble_EnsembleDate}/${config_UserChoices_JobName} |
---|
| 216 | R_FIGR=${R_FIG}/${config_UserChoices_TagName}/${config_Ensemble_EnsembleName}/${config_Ensemble_EnsembleDate}/${config_UserChoices_JobName} |
---|
| 217 | R_BUFR=${R_BUF}/${config_UserChoices_TagName}/${config_Ensemble_EnsembleName}/${config_Ensemble_EnsembleDate}/${config_UserChoices_JobName} |
---|
| 218 | R_DODS=${config_UserChoices_TagName}/${config_Ensemble_EnsembleName}/${config_Ensemble_EnsembleDate}/${config_UserChoices_JobName} |
---|
| 219 | else |
---|
[263] | 220 | R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_JobName} |
---|
[587] | 221 | R_FIGR=${R_FIG}/${config_UserChoices_TagName}/${config_UserChoices_JobName} |
---|
[546] | 222 | R_BUFR=${R_BUF}/${config_UserChoices_TagName}/${config_UserChoices_JobName} |
---|
[263] | 223 | R_DODS=${config_UserChoices_TagName}/${config_UserChoices_JobName} |
---|
[658] | 224 | fi |
---|
[263] | 225 | fi |
---|
| 226 | # |
---|
[591] | 227 | IGCM_sys_MkdirArchive ${R_FIGR} |
---|
[263] | 228 | |
---|
[2] | 229 | R_ATLAS=ATLAS/SE_${YEARS} |
---|
| 230 | R_OUT_OCE=${R_SAVE}/OCE |
---|
| 231 | R_OUT_ICE=${R_SAVE}/ICE |
---|
[370] | 232 | DIR_OUT=${DIR_OUT:=SE} |
---|
[2] | 233 | |
---|
[34] | 234 | RUN_DIR=${RUN_DIR_PATH}/ATLAS_ORCALIM_${YEARS} |
---|
| 235 | IGCM_sys_MkdirWork ${RUN_DIR} |
---|
| 236 | IGCM_sys_Cd ${RUN_DIR} |
---|
[2] | 237 | |
---|
| 238 | # -------------------------------------------- |
---|
| 239 | # Insert your commands between III...III lines |
---|
| 240 | # and precise produced directories to save |
---|
| 241 | # IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII |
---|
| 242 | |
---|
[370] | 243 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/${DIR_OUT}/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_T.nc ${RUN_DIR} |
---|
| 244 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/${DIR_OUT}/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_U.nc ${RUN_DIR} |
---|
| 245 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/${DIR_OUT}/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_V.nc ${RUN_DIR} |
---|
| 246 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/${DIR_OUT}/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_W.nc ${RUN_DIR} |
---|
| 247 | IGCM_sys_Get ${R_OUT_ICE}/Analyse/${DIR_OUT}/${config_UserChoices_JobName}_SE_${YEARS}_1M_icemod.nc ${RUN_DIR} |
---|
[2] | 248 | |
---|
[470] | 249 | atlas -o ${RUN_DIR}/${R_ATLAS}/OCE_T -l ${FER_ATLAS}/atlas_p_${RESOL_OCE}_diag1_[abc].cfg ${RUN_DIR}/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_T.nc |
---|
[34] | 250 | atlas -o ${RUN_DIR}/${R_ATLAS}/OCE_U -l ${FER_ATLAS}/atlas_p_${RESOL_OCE}_diag0_U.cfg ${RUN_DIR}/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_U.nc |
---|
| 251 | atlas -o ${RUN_DIR}/${R_ATLAS}/OCE_V -l ${FER_ATLAS}/atlas_p_${RESOL_OCE}_diag0_V.cfg ${RUN_DIR}/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_V.nc |
---|
| 252 | #atlas -o ${RUN_DIR}/${R_ATLAS}/OCE_W -l ${FER_ATLAS}/atlas_p_${RESOL_OCE}_diag0_W.cfg ${RUN_DIR}/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_W.nc |
---|
[470] | 253 | atlas -o ${RUN_DIR}/${R_ATLAS}/OCE -l ${FER_ATLAS}/atlas_p_${RESOL_OCE}_diag0_[defg].cfg ${RUN_DIR}/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_T.nc |
---|
[34] | 254 | atlas -o ${RUN_DIR}/${R_ATLAS}/ICE -l ${FER_ATLAS}/atlas_p_${RESOL_OCE}LIM_diag0_[abc].cfg ${RUN_DIR}/${config_UserChoices_JobName}_SE_${YEARS}_1M_icemod.nc |
---|
[2] | 255 | |
---|
| 256 | # IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII |
---|
| 257 | |
---|
| 258 | # Put ferret journal files together |
---|
| 259 | for file in $( ls ${R_ATLAS}/OCE_T/*/*jnl ) ; do |
---|
| 260 | echo -e "\n\n################################" ; |
---|
| 261 | echo -e "$file\n" ; cat $file ; |
---|
| 262 | done > ${R_ATLAS}/OCE_T/allferretscript.txt |
---|
| 263 | |
---|
| 264 | for file in $( ls ${R_ATLAS}/OCE_U/*/*jnl ) ; do |
---|
| 265 | echo -e "\n\n################################" ; |
---|
| 266 | echo -e "$file\n" ; cat $file ; |
---|
| 267 | done > ${R_ATLAS}/OCE_U/allferretscript.txt |
---|
| 268 | |
---|
| 269 | for file in $( ls ${R_ATLAS}/OCE_V/*/*jnl ) ; do |
---|
| 270 | echo -e "\n\n################################" ; |
---|
| 271 | echo -e "$file\n" ; cat $file ; |
---|
| 272 | done > ${R_ATLAS}/OCE_V/allferretscript.txt |
---|
| 273 | |
---|
| 274 | for file in $( ls ${R_ATLAS}/OCE/*/*jnl ) ; do |
---|
| 275 | echo -e "\n\n################################" ; |
---|
| 276 | echo -e "$file\n" ; cat $file ; |
---|
| 277 | done > ${R_ATLAS}/OCE/allferretscript.txt |
---|
| 278 | |
---|
| 279 | for file in $( ls ${R_ATLAS}/ICE/*/*jnl ) ; do |
---|
| 280 | echo -e "\n\n################################" ; |
---|
| 281 | echo -e "$file\n" ; cat $file ; |
---|
| 282 | done > ${R_ATLAS}/ICE/allferretscript.txt |
---|
| 283 | |
---|
[74] | 284 | # WHILE WAITING FOR A MORE GENERIC SOLUTION |
---|
[367] | 285 | if ( [ ${config_UserChoices_TagName} = "IPSLCM5" ] || [ ${config_UserChoices_TagName} = "IPSLCM5A" ] || [ ${config_UserChoices_TagName} = "IPSLCM5A-MR" ] || [ ${config_UserChoices_TagName} = "ORCA2_LIM2" ] || [ ${config_UserChoices_TagName} = "ORCA2_LIM2_PISCES" ] ) ; then |
---|
[370] | 286 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/${DIR_OUT}/${config_UserChoices_JobName}_SE_${YEARS}_1M_diaptr.nc ${RUN_DIR} ; |
---|
[74] | 287 | atlas -o ${RUN_DIR}/${R_ATLAS}/ZNL -d -l ${FER_ATLAS}/atlas_l_${RESOL_OCE}_znl.cfg ${RUN_DIR}/${config_UserChoices_JobName}_SE_${YEARS}_1M_diaptr.nc ; |
---|
| 288 | for file in $( ls ${R_ATLAS}/ZNL/*/*jnl ) ; do |
---|
| 289 | echo -e "\n\n################################" ; |
---|
| 290 | echo -e "$file\n" ; cat $file ; |
---|
[165] | 291 | done > ${R_ATLAS}/ZNL/allferretscript.txt |
---|
[74] | 292 | fi |
---|
| 293 | |
---|
[2] | 294 | # Clear some files |
---|
| 295 | find . \( -name "*.stdout" -o -name "*.jnl" \) -print -exec rm -f {} \; |
---|
| 296 | |
---|
| 297 | # Save files |
---|
[587] | 298 | IGCM_sys_Put_Dir ATLAS ${R_FIGR} |
---|
[2] | 299 | |
---|
| 300 | IGCM_sys_Rm -Rf ATLAS |
---|
| 301 | IGCM_sys_Rm ${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_[TUVW].nc |
---|
| 302 | IGCM_sys_Rm ${config_UserChoices_JobName}_SE_${YEARS}_1M_icemod.nc |
---|
[74] | 303 | # WHILE WAITING FOR A MORE GENERIC SOLUTION |
---|
[367] | 304 | if ( [ ${config_UserChoices_TagName} = "IPSLCM5" ] || [ ${config_UserChoices_TagName} = "IPSLCM5A" ] || [ ${config_UserChoices_TagName} = "IPSLCM5A-MR" ] || [ ${config_UserChoices_TagName} = "ORCA2_LIM2" ] || [ ${config_UserChoices_TagName} = "ORCA2_LIM2_PISCES" ] ) ; then |
---|
[74] | 305 | IGCM_sys_Rm ${config_UserChoices_JobName}_SE_${YEARS}_1M_diaptr.nc ; |
---|
| 306 | fi |
---|
[2] | 307 | |
---|
| 308 | # DODS copy |
---|
[587] | 309 | IGCM_sys_TestDirArchive ${R_FIGR}/${R_ATLAS} |
---|
[67] | 310 | [ $? = 0 ] && IGCM_sys_Put_Dods ${R_ATLAS} |
---|
[203] | 311 | |
---|
[590] | 312 | # Clean RUN_DIR_PATH (necessary for cesium and titane only) |
---|
[203] | 313 | IGCM_sys_RmRunDir -Rf ${RUN_DIR_PATH} |
---|