source: trunk/libIGCM/AA_clean_or_continue @ 1576

#!/bin/ksh
#**************************************************************
# Author: Martial Mancip
# Contact: Martial.Mancip__at__ipsl.jussieu.fr
# $Revision::                                          $ Revision of last commit
# $Author::                                            $ Author of last commit
# $Date::                                              $ Date of last commit
# IPSL (2006)
#  This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
#
#**************************************************************
# ID of your genci project. Curie only : post-processing jobs need it to run properly
#-Q- curie export BRIDGE_MSUB_PROJECT=::default_project::
#-Q- irene export BRIDGE_MSUB_PROJECT=::default_project::
#-Q- irene-amd export BRIDGE_MSUB_PROJECT=::default_project::

#set -eu
#set -vx

libIGCM=::modipsl::/libIGCM

#D- Task type DO NOT CHANGE (computing, post-processing or checking)
TaskType=post-processing

#D--------------------------------------------------------------------==
#D-                   -1. User modification place
#D--------------------------------------------------------------------==

#D- Increased verbosity (1, 2, 3)
Verbosity=3

#D- Low level debug : to bypass lib test checks and stack construction
#D- Default=true
DEBUG_debug=false

#D--------------------------------------------------------------------==
echo ""
echo "clean_or_continue.job "
if  [ $# -gt 0 ] ; then
    # Print help and exit
    echo ""
    echo "The script is called from in the your experiment directory, the so-called SUBMIT_DIR, in the following way"
    echo "../../../libIGCM/clean_or_continue.job -h      : to print following information"
    echo "../../../libIGCM/clean_or_continue.job         : normal execution"
    echo ""
    echo "This script can be used for 3 cases:"
    echo "1- The simulation crashed and you have PeriodState=Fatal in run.card."
    echo "For this case, all output from the current PeriodLength set in run.card will be deleted. "
    echo "You need to answer yes to the questions."
    echo ""
    echo "2- The simulation stopped due to an exceeded time limit, PeriodState=Running in run.card". 
    echo "As for case 1, all output from the current PeriodLength will be deleted and you should answer yes to questions".
    echo ""
    echo "3- The simulation is completed but you want to continue it, PeriodState=Completed in run.card."
    echo "For this case, you just need to change DateEnd in config.card and launch this script."
    echo ""
    echo "For all cases, the run.card is changed as needed and the number for the current period is set in the main Job_ for the Script_Output_ file"
    echo ""
    echo "This script needs to delete files to work correctly. Therefore you should answer yes to the questions."
    echo ""

    exit
fi
echo ""
echo "This script needs to delete files to work correctly. Therefore you should answer yes to the questions."
echo "Use ../../../libIGCM/clean_or_contine.job -h  for more information"
echo ""

#D--------------------------------------------------------------------==

. ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh
. ${libIGCM}/libIGCM_card/libIGCM_card.ksh
. ${libIGCM}/libIGCM_date/libIGCM_date.ksh
#-------
SUBMIT_DIR=$( pwd )
. ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh
. ${libIGCM}/libIGCM_config/libIGCM_config.ksh
#-------
( ${DEBUG_debug} ) && IGCM_debug_Check
( ${DEBUG_debug} ) && IGCM_card_Check
( ${DEBUG_debug} ) && IGCM_date_Check

#==================================
# First of all
#
# Read libIGCM compatibility version in config.card
# Read UserChoices section
# Read Ensemble section
# Read Post section
# Define all netcdf output directories
#==================================
IGCM_config_CommonConfiguration ${SUBMIT_DIR}/config.card

#==================================
# Define default value to keep compatibility with previous card: means before changes due to TGCC
if [ X${PackDefault} = Xtrue ] ; then
  [ X${config_Post_PackFrequency} = X ] && config_Post_PackFrequency=${config_Post_RebuildFrequency}
else
  config_Post_PackFrequency=NONE
fi

#==================================
# Is the pack active
if ( [ ! X${config_Post_PackFrequency} = X${NULL_STR} ] && [ ! X${config_Post_PackFrequency} = XNONE ] ) ; then
  Pack=true
fi

IGCM_sys_TestDirArchive ${R_SAVE}
[ $? != 0 ] && IGCM_debug_Exit "IGCM_sys_TestDirArchive"

if [ ! -f ${SUBMIT_DIR}/run.card ]; then
  echo "You seem NOT to have a run.card in this directory !!"
  echo "This script will fail because it doesn't know what to do without run.card available."
  exit 1
else
  #===================================#
  #        Read updated run.card      #
  #===================================#
  IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodState
  IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodDateBegin
  IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodDateEnd
  IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration CumulPeriod

  # 
  if [ X${run_Configuration_CumulPeriod} = X ] ; then
    echo -e "\033[1;32mCumulPeriod is empty so we want to erase run.card to start properly. Do you want that?"
    echo -n -e " Your answer (y/n) : \033[m"
    read reponse
    case ${reponse} in

    oui|OUI|o|y|yes|YES)
      echo "OK. Now you can submit the Job : ${SUBMIT_DIR}/Job_${config_UserChoices_JobName}."
      IGCM_sys_Rm ${SUBMIT_DIR}/run.card
      ;;
    non|NON|n|no|NO)
      echo "Nothing to do !"
      ;;
    esac
    exit 0
  fi

  PeriodDateEnd=$( IGCM_date_ConvertFormatToGregorian ${run_Configuration_PeriodDateEnd} )
  echo "Search files with ${PeriodDateEnd} in ${R_SAVE}"
  set +A ListFiles -- $( IGCM_sys_RshArchive "find ${R_SAVE} -name \"*${PeriodDateEnd}*\" " )
  CountListFiles=${#ListFiles[@]}

  if [ X${Pack} = Xtrue ] ; then
    echo "Search files with ${PeriodDateEnd} in ${R_BUFR}"
    set +A ListFilesBuf -- $( IGCM_sys_RshMaster "find ${R_BUFR} -name \"*${PeriodDateEnd}*\" " )
    CountListFilesBuf=${#ListFilesBuf[@]}
  else
    CountListFilesBuf=0
  fi

  # If exist, erase REBUILD DIR
  PeriodDateBegin=$( IGCM_date_ConvertFormatToGregorian ${run_Configuration_PeriodDateBegin} )
  CountRebuildDir=0
  if [ X${config_Post_RebuildFrequency} != X ] ; then
    set +A RebuildDir -- $( find ${REBUILD_DIR} -type d -name "*${PeriodDateBegin}*" )
    CountRebuildDir=${#RebuildDir[@]}
  fi

  IGCM_debug_Print 1 "Number of files to be erased : ${CountListFiles}."
  if ( [ ${CountListFiles} -gt 0 ] || [ ${CountListFilesBuf} -gt 0 ] ) ; then
    for file in ${ListFiles[@]} ; do
      IGCM_debug_Print 2 -e "\033[1;31m ${file}\033[m"
    done
    if [ X${Pack} = Xtrue ] ; then
      for file in ${ListFilesBuf[@]} ; do
        IGCM_debug_Print 2 -e "\033[1;31m ${file}\033[m"
      done
    fi
    echo -e "\033[1;32mDo you REALLY want to erase all those files ?"
    echo -n -e " Your answer (y/n) : \033[m"
    read reponse
    case ${reponse} in

      oui|OUI|o|y|yes|YES)
        echo "OK. It will be erased."
        IGCM_sys_RshArchive "find ${R_SAVE} -name \"*${PeriodDateEnd}*\" -exec rm -f '{}' \;"
        if [ X${Pack} = Xtrue ] ; then
          IGCM_sys_RshMaster  "find ${R_BUFR} -name \"*${PeriodDateEnd}*\" -exec rm -f '{}' \;"
        fi
        echo "done."
        ;;
      non|NON|n|no|NO)
        echo "Nothing to do !"
        ;;
    esac
  fi

  if [ ${CountRebuildDir} -gt 0 ] ; then
    IGCM_debug_Print 1 "Number of REBUILD Dirs to be erased : ${CountRebuildDir}."
    for Dir in ${RebuildDir[@]} ; do
      IGCM_debug_Print 2 -e "\033[1;31m ${Dir}\033[m"
    done

    echo -e "\033[1;32mDo you REALLY want to erase all those Directories ?"
    echo -n -e " Your answer (y/n) : \033[m"
    read reponse
    case ${reponse} in

      oui|OUI|o|y|yes|YES)
        echo "OK. It will be erased."
        find ${REBUILD_DIR} -type d -name "*${PeriodDateBegin}*" -exec rm -Rf '{}' \;
        echo "done."
        ;;
      non|NON|n|no|NO)
        echo "Nothing to do !"
        ;;
    esac
  fi

  IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodState
  if ( [ ${run_Configuration_PeriodState} != "Running" ] && [ ${run_Configuration_PeriodState} != "OnQueue" ] && [ ${run_Configuration_PeriodState} != "Continue" ] ) ; then

    echo -e "\033[1;32mNOW do you want to continue the simulation (Set PeriodState=OnQueue into run.card) ?"
    echo -n -e " Your answer (y/n) : \033[m"
    read reponse
    case ${reponse} in

      oui|OUI|o|y|yes|YES)
        echo "OK. Now you can submit the Job : ${SUBMIT_DIR}/Job_${config_UserChoices_JobName}."
        IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration PeriodState "OnQueue"
        ;;
      non|NON|n|no|NO)
        echo "Nothing to do !"
        ;;
    esac
  else
    echo "You can submit the Job : ${SUBMIT_DIR}/Job_${config_UserChoices_JobName}."
  fi

  if [ X${run_Configuration_CumulPeriod} = X1 ] ; then
    echo -e "\033[1;32mCumulPeriod=1 so we want to erase run.card to start properly. Do you want that too?"
    echo -n -e " Your answer (y/n) : \033[m"
    read reponse
    case ${reponse} in

      oui|OUI|o|y|yes|YES)
        echo "OK. Now you can submit the Job : ${SUBMIT_DIR}/Job_${config_UserChoices_JobName}."
        IGCM_sys_Rm ${SUBMIT_DIR}/run.card
        ;;
      non|NON|n|no|NO)
        echo "Nothing to do !"
        ;;
    esac
  else
    # if not first period
    Script_Output_Prefix=${config_UserChoices_Script_Output_Prefix:='Script_Output'}
    Script_Output_Job=${Script_Output_Prefix}_${config_UserChoices_JobName}
    Script_Output=${Script_Output_Prefix}_${config_UserChoices_JobName}.$( printf "%06d" ${run_Configuration_CumulPeriod} )

    echo -e "\033[1;32mDo you want to change the number in Script_Output? (${Script_Output} into Job) ?"
    echo -n -e " Your answer (y/n) : \033[m"
    read reponse
    case ${reponse} in

      oui|OUI|o|y|yes|YES)
        cp ${SUBMIT_DIR}/Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/Job_${config_UserChoices_JobName}_SAVED_$$
        sed -e"s/${Script_Output_Job}.[0-9][0-9][0-9][0-9][0-9][0-9]/${Script_Output}/"  ${SUBMIT_DIR}/Job_${config_UserChoices_JobName}_SAVED_$$  >${SUBMIT_DIR}/Job_${config_UserChoices_JobName}
        echo "Job : Job_${config_UserChoices_JobName} modified."
        echo "Old job saved here : Job_${config_UserChoices_JobName}_SAVED_$$"
        ;;
      non|NON|n|no|NO)
        echo "Nothing done in Job_${config_UserChoices_JobName} !"
        ;;
    esac

  fi
fi
exit 0