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source: trunk/libIGCM/AA_create_ts @ 555

Last change on this file since 555 was 554, checked in by sdipsl, 12 years ago
Mechanism in place to submit pack jobs. Add a PackFrequency? ; default to RebuildFrequency? if not present in config.card Add coherence checks between PackFrequency? and relevant dependant frequencies pack_restart and pack_debug ready in batch mode. Testing in progress. Submission is still a comment in libIGCM_post Move and generalize create_ts_next_date from AA_create_ts to libIGCM_date. Rename to IGCM_date_DaysInNextPeriod Move and generalyze create_ts_begin_date from AA_create_ts to libIGCM_date. Rename to IGCM_date_DaysInPreviousPeriod Cosmetics
Property licence set to The following licence information concerns ONLY the libIGCM tools ================================================================== Copyright © Centre National de la Recherche Scientifique CNRS Commissariat à l'Énergie Atomique CEA libIGCM : Library for Portable Models Computation of IGCM Group. IGCM Group is the french IPSL Global Climate Model Group. This library is a set of shell scripts and functions whose purpose is the management of the initialization, the launch, the transfer of output files, the post-processing and the monitoring of datas produce by any numerical program on any plateforme. This software is governed by the CeCILL license under French law and abiding by the rules of distribution of free software. You can use, modify and/ or redistribute the software under the terms of the CeCILL license as circulated by CEA, CNRS and INRIA at the following URL "http://www.cecill.info". As a counterpart to the access to the source code and rights to copy, modify and redistribute granted by the license, users are provided only with a limited warranty and the software's author, the holder of the economic rights, and the successive licensors have only limited liability. In this respect, the user's attention is drawn to the risks associated with loading, using, modifying and/or developing or reproducing the software by the user in light of its specific status of free software, that may mean that it is complicated to manipulate, and that also therefore means that it is reserved for developers and experienced professionals having in-depth computer knowledge. Users are therefore encouraged to load and test the software's suitability as regards their requirements in conditions enabling the security of their systems and/or data to be ensured and, more generally, to use and operate it in the same conditions as regards security. The fact that you are presently reading this means that you have had knowledge of the CeCILL license and that you accept its terms. Property svn:keywords set to `Revision Author Date`
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1	#-Q- cesium #!/bin/ksh
2	#-Q- cesium ######################
3	#-Q- cesium ## CESIUM CEA ##
4	#-Q- cesium ######################
5	#-Q- cesium #MSUB -r TS # Nom du job
6	#-Q- cesium #MSUB -N 1 # Reservation du noeud
7	#-Q- cesium #MSUB -n 1 # Reservation du processus
8	#-Q- cesium #MSUB -T 86400 # Limite de temps elapsed du job
9	#-Q- cesium #MSUB -E "-j o"
10	#-Q- cesium #MSUB -E "-S /bin/ksh"
11	#-Q- platine #!/usr/bin/ksh
12	#-Q- platine ###################
13	#-Q- platine ## PLATINE CEA ##
14	#-Q- platine ###################
15	#-Q- platine #BSUB -J TS # Nom du job
16	#-Q- platine #BSUB -N # message a la fin du job
17	#-Q- platine #BSUB -n 1 # reservation des processeurs pour le job
18	#-Q- platine #BSUB -W 1:00 # Limite temps
19	#-Q- platine #BSUB -q post # Passage en queue post
20	#-Q- platine #BSUB -L /bin/ksh
21	#-Q- sx8brodie #!/bin/ksh
22	#-Q- sx8brodie #######################
23	#-Q- sx8brodie ## SX8BRODIE IDRIS ##
24	#-Q- sx8brodie #######################
25	#-Q- sx8brodie # Temps Elapsed max. d'une requete hh:mm:ss
26	#-Q- sx8brodie # @ wall_clock_limit = 20:00:00
27	#-Q- sx8brodie # Nom du travail LoadLeveler
28	#-Q- sx8brodie # @ job_name = TS
29	#-Q- sx8brodie # Fichier de sortie standard du travail
30	#-Q- sx8brodie # @ output = $(job_name).$(jobid)
31	#-Q- sx8brodie # Fichier de sortie d'erreur du travail
32	#-Q- sx8brodie # @ error = $(job_name).$(jobid)
33	#-Q- sx8brodie # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
34	#-Q- sx8brodie # @ notification = error
35	#-Q- sx8brodie # @ environment = $DEBUG_debug ; $MODIPSL ; $libIGCM ; $libIGCM_SX ; $SUBMIT_DIR ; $REBUILD_DIR ; $RebuildFromArchive ; $POST_DIR ; $MASTER ; $RebuildFrequency ; $DateBegin ; $PeriodDateBegin ; $PeriodDateEnd ; $NbRebuildDir ; $StandAlone ; $CompletedFlag ; $TsTask ; $CompToRead ; $FlagToRead ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $RESOL_SBG ; $MASTER
36	#-Q- sx8brodie # @ queue
37	#-Q- aix6 #!/bin/ksh
38	#-Q- aix6 #######################
39	#-Q- aix6 ## VARGAS IDRIS ##
40	#-Q- aix6 #######################
41	#-Q- aix6 # Temps Elapsed max. d'une requete hh:mm:ss
42	#-Q- aix6 # @ wall_clock_limit = 20:00:00
43	#-Q- aix6 # Nom du travail LoadLeveler
44	#-Q- aix6 # @ job_name = TS
45	#-Q- aix6 # Fichier de sortie standard du travail
46	#-Q- aix6 # @ output = $(job_name).$(jobid)
47	#-Q- aix6 # Fichier de sortie d'erreur du travail
48	#-Q- aix6 # @ error = $(job_name).$(jobid)
49	#-Q- aix6 # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
50	#-Q- aix6 # @ notification = error
51	#-Q- aix6 # @ environment = $DEBUG_debug ; $MODIPSL ; $libIGCM ; $libIGCM_SX ; $SUBMIT_DIR ; $REBUILD_DIR ; $RebuildFromArchive ; $POST_DIR ; $MASTER ; $RebuildFrequency ; $DateBegin ; $PeriodDateBegin ; $PeriodDateEnd ; $NbRebuildDir ; $StandAlone ; $CompletedFlag ; $TsTask ; $CompToRead ; $FlagToRead ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $RESOL_SBG ; $MASTER
52	#-Q- aix6 # @ queue
53	#-Q- ulam #!/bin/ksh
54	#-Q- ulam #######################
55	#-Q- ulam ## ULAM IDRIS ##
56	#-Q- ulam #######################
57	#-Q- ulam # Temps Elapsed max. d'une requete hh:mm:ss
58	#-Q- ulam # @ wall_clock_limit = 20:00:00
59	#-Q- ulam # Nom du travail LoadLeveler
60	#-Q- ulam # @ job_name = TS
61	#-Q- ulam # Fichier de sortie standard du travail
62	#-Q- ulam # @ output = $(job_name).$(jobid)
63	#-Q- ulam # Fichier de sortie d'erreur du travail
64	#-Q- ulam # @ error = $(job_name).$(jobid)
65	#-Q- ulam # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
66	#-Q- ulam # @ notification = error
67	#-Q- ulam # @ environment = $DEBUG_debug ; $MODIPSL ; $libIGCM ; $libIGCM_SX ; $SUBMIT_DIR ; $REBUILD_DIR ; $RebuildFromArchive ; $POST_DIR ; $MASTER ; $RebuildFrequency ; $DateBegin ; $PeriodDateBegin ; $PeriodDateEnd ; $NbRebuildDir ; $StandAlone ; $CompletedFlag ; $TsTask ; $CompToRead ; $FlagToRead ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $RESOL_SBG ; $MASTER
68	#-Q- ulam # @ queue
69	#-Q- sx8mercure #!/bin/ksh
70	#-Q- sx8mercure ######################
71	#-Q- sx8mercure ## SX8MERCURE CEA ##
72	#-Q- sx8mercure ######################
73	#-Q- sx8mercure #PBS -N TS # Nom du job
74	#-Q- sx8mercure #PBS -j o # regroupement des stdout et stderr
75	#-Q- sx8mercure #PBS -S /usr/bin/ksh # shell de soumission
76	#-Q- sx8mercure #PBS -l memsz_job=1gb # Limite memoire a 1 Go
77	#-Q- sx8mercure #PBS -l cputim_job=24:00:00 # Limite temps a 2 heures
78	#-Q- sx8mercure #PBS -q scalaire
79	#-Q- sx9mercure #!/bin/ksh
80	#-Q- sx9mercure #########################
81	#-Q- sx9mercure ## CESIUM FOR SX9 CEA ##
82	#-Q- sx9mercure #########################
83	#-Q- sx9mercure #MSUB -r TS # Nom du job
84	#-Q- sx9mercure #MSUB -N 1 # Reservation du noeud
85	#-Q- sx9mercure #MSUB -n 1 # Reservation du processus
86	#-Q- sx9mercure #MSUB -T 86400 # Limite de temps elapsed du job
87	#-Q- sx9mercure #MSUB -E "-j o"
88	#-Q- sx9mercure #MSUB -E "-S /bin/ksh"
89	#-Q- titane #!/bin/ksh
90	#-Q- titane ######################
91	#-Q- titane ## TITANE CEA ##
92	#-Q- titane ######################
93	#-Q- titane #MSUB -r TS # Nom du job
94	#-Q- titane #MSUB -eo
95	#-Q- titane #MSUB -n 1 # Reservation du processus
96	#-Q- titane #MSUB -T 86400 # Limite de temps elapsed du job
97	#-Q- titane #MSUB -q mono
98	#-Q- lxiv8 ######################
99	#-Q- lxiv8 ## OBELIX LSCE ##
100	#-Q- lxiv8 ######################
101	#-Q- lxiv8 #PBS -N TS
102	#-Q- lxiv8 #PBS -m a
103	#-Q- lxiv8 #PBS -j oe
104	#-Q- lxiv8 #PBS -q medium
105	#-Q- lxiv8 #PBS -o TS.$$
106	#-Q- lxiv8 #PBS -S /bin/ksh
107	#-Q- default #!/bin/ksh
108	#-Q- default ##################
109	#-Q- default ## DEFAULT HOST ##
110	#-Q- default ##################
111
112	#**************************************************************
113	# Author: Sebastien Denvil
114	# Contact: Sebastien.Denvil__at__ipsl.jussieu.fr
115	# $Revision:: $ Revision of last commit
116	# $Author:: $ Author of last commit
117	# $Date:: $ Date of last commit
118	# IPSL (2006)
119	# This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
120	#
121	#**************************************************************
122
123	#set -eu
124	#set -vx
125
126	date
127
128	#-Q- sx8brodie export OMP_NUM_THREADS=1
129	#-Q- aix6 export OMP_NUM_THREADS=1
130	#-Q- ulam export OMP_NUM_THREADS=1
131
132	########################################################################
133
134	#D- Flag to determine if this job in a standalone mode
135	#D- Default : value from AA_job if any
136	StandAlone=${StandAlone:=true}
137
138	#D- Path to libIGCM
139	#D- Default : value from AA_job if any
140	# WARNING For StandAlone use : To run this script on some machine (ulam and cesium)
141	# WARNING you must check MirrorlibIGCM variable in sys library.
142	# WARNING If this variable is true, you must use libIGCM_POST path instead
143	# WARNING of your running libIGCM directory.
144	libIGCM=${libIGCM:=::modipsl::/libIGCM}
145
146	#D- Flag to determine allready produced time series. Empty if you start from the beginning
147	#D- Default : Value from AA_job if any. Usefull in StandAlone case if you want to continue a time series
148	CompletedFlag=${CompletedFlag:=}
149
150	#D- Flag to determine task type this script will perform.
151	#D- Possible Value : 2D, 3D, Chunck2D, Chunck3D
152	#D- Default : Value from AA_job if any. Usefull in StandAlone case.
153	TsTask=${TsTask:=2D}
154	if [ X${TsTask} = Xempty ] ; then
155	TsTask=""
156	fi
157
158	#D- Flag to determine if rebuild process has been performed asynchronously
159	#D- Possible value true or false.
160	#D- If true raw files has allready been patched by rebuild job
161	#D- If false create_ts will patch the raw files
162	#D- Default : Value from AA_job if any. Usefull in StandAlone case.
163	RebuildFrequency=${RebuildFrequency:=true}
164
165	#D- Flag to determine job's output directory
166	#D- Default : value from libIGCM_post.ksh if any
167	POST_DIR=${POST_DIR:=${PBS_O_WORKDIR:=$(pwd)}}
168
169	#D- Increased verbosity (1, 2, 3)
170	#D- Default : value from AA_job if any
171	Verbosity=${Verbosity:=3}
172
173	#D- Low level debug : to bypass lib test checks and stack construction
174	#D- Default : value from AA_job if any
175	DEBUG_debug=${DEBUG_debug:=false}
176
177	#D- TEMPORARY Flag to determine atmospheric resolution
178	#D- Default : value from atmospheric driver if any
179	RESOL_ATM=ALL
180
181	#D- Flag to determine surface resolution
182	#D- Default : value from surface driver if any
183	RESOL_SRF=ALL
184
185	#D- Flag to determine surface resolution
186	#D- Default : value from surface driver if any
187	RESOL_SBG=ALL
188
189	#D- TEMPORARY Flag to determine ocean resolution
190	#D- Default : value from ocean driver if any
191	RESOL_OCE=${RESOL_OCE:=ORCA2}
192
193	#D- TEMPORARY Flag to determine ice resolution
194	#D- Default : value from ice driver if any
195	RESOL_ICE=${RESOL_ICE:=ORCA2}
196
197	#D- TEMPORARY Flag to determine marine biogeochemistry resolution
198	#D- Default : value from ice driver if any
199	RESOL_MBG=${RESOL_MBG:=ORCA2}
200
201	########################################################################
202
203	. ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh
204	( ${DEBUG_debug} ) && IGCM_debug_Check
205	. ${libIGCM}/libIGCM_card/libIGCM_card.ksh
206	( ${DEBUG_debug} ) && IGCM_card_Check
207	. ${libIGCM}/libIGCM_date/libIGCM_date.ksh
208	( ${DEBUG_debug} ) && IGCM_date_Check
209	#-------
210	. ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh
211
212	########################################################################
213
214	#set -vx
215
216	# Useful cleaning function
217	MENAGE ()
218	{
219	[ -f $3 ] && ( IGCM_sys_RshArchive rm -f $1/$2 ;)
220	}
221
222	########################################################################
223
224	IGCM_sys_MkdirWork ${RUN_DIR_PATH}
225	IGCM_sys_Cd ${RUN_DIR_PATH}
226
227	# ------------------------------------------------------------------
228	# Test if all was right before proceeding further
229	# ------------------------------------------------------------------
230	IGCM_debug_Verif_Exit_Post
231
232	if [ ${StandAlone} = true ] ; then
233	CARD_DIR=${SUBMIT_DIR}
234	else
235	CARD_DIR=${RUN_DIR_PATH}/$( basename ${SUBMIT_DIR} )
236	IGCM_sys_Get_Master ${SUBMIT_DIR} ${RUN_DIR_PATH}
237	fi
238
239	#
240	# First of all
241	#
242	IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card UserChoices
243	typeset option
244	for option in ${config_UserChoices[*]} ; do
245	IGCM_card_DefineVariableFromOption ${CARD_DIR}/config.card UserChoices ${option}
246	done
247	#
248	echo
249	IGCM_debug_Print 1 "DefineArrayFromOption : config_UserChoices"
250	IGCM_debug_PrintVariables 3 config_UserChoices_JobName
251	IGCM_debug_PrintVariables 3 config_UserChoices_LongName
252	IGCM_debug_PrintVariables 3 config_UserChoices_TagName
253	IGCM_debug_PrintVariables 3 config_UserChoices_SpaceName
254	IGCM_debug_PrintVariables 3 config_UserChoices_ExperimentName
255	IGCM_debug_PrintVariables 3 config_UserChoices_CalendarType
256	IGCM_debug_PrintVariables 3 config_UserChoices_DateBegin
257	IGCM_debug_PrintVariables 3 config_UserChoices_DateEnd
258	IGCM_debug_PrintVariables 3 config_UserChoices_PeriodLength
259	echo
260
261	#==================================
262	#R_SAVE : Job output directory
263	#R_BUFR : Job output buffered directory
264	if ( [ ! X${config_UserChoices_SpaceName} = X ] && [ ! X${config_UserChoices_ExperimentName} = X ] ) ; then
265	FreeName=$( echo ${config_UserChoices_JobName} \| sed 's/.*_//' )
266	R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName}
267	R_BUFR=${R_BUF}/${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName}
268	R_DODS=${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName}
269	else
270	R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_JobName}
271	R_BUFR=${R_BUF}/${config_UserChoices_TagName}/${config_UserChoices_JobName}
272	R_DODS=${config_UserChoices_TagName}/${config_UserChoices_JobName}
273	fi
274	#
275	# Determine component to take care of depending on kind of task create_ts will perform
276	#
277	[ ${CompToRead} ] && set -A config_ListOfComponents ${CompToRead} \|\| IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card ListOfComponents
278	#
279	# Determine period for time series. Default : value from AA_job or from launch_TS if any
280	#
281	[ X${CompletedFlag} = X ] \|\| CompletedFlag=$( IGCM_date_ConvertFormatToGregorian ${CompletedFlag} )
282
283	DateBegin=${DateBegin:=$( IGCM_date_ConvertFormatToGregorian ${config_UserChoices_DateBegin} )}
284	#
285	PeriodDateEnd=${PeriodDateEnd:=$( IGCM_date_ConvertFormatToGregorian ${config_UserChoices_DateEnd} )}
286	#
287	# Determine Dimension of the produced time series : 2D or 3D
288	if ( [ X${TsTask} = XChunck2D ] \|\| [ X${TsTask} = X2D ] ) ; then
289	Dimension=2D
290	elif ( [ X${TsTask} = XChunck3D ] \|\| [ X${TsTask} = X3D ] ) ; then
291	Dimension=3D
292	else
293	Dimension=""
294	fi
295
296	# ------------------------------------------------------------------
297	#D- Test if all was right before entering the loop
298	# ------------------------------------------------------------------
299	IGCM_debug_Verif_Exit_Post
300
301	########################################################################
302	#
303	# Depending on requested time series fill following variables :
304	#
305	# - LISTE_FILE_${comp}[*]
306	# - LISTE_VARS_${file}[*]
307	# - LISTE_AXIS_${file}[*]
308	# - LISTE_PATCH_${file}[*]
309	########################################################################
310
311	#
312	# For each selected component determine which files need post-processing
313	#
314	DoJob=false
315	for comp in ${config_ListOfComponents[*]} ; do
316	#
317	ActiveComp=false
318	#
319	IGCM_card_DefineArrayFromOption ${CARD_DIR}/config.card ListOfComponents ${comp}
320	eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1
321	#
322	card=${CARD_DIR}/COMP/${compname}.card
323
324	IGCM_card_DefineArrayFromOption ${card} OutputFiles List
325	#
326	ListFilesName=${compname}_OutputFiles_List
327	eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1
328	#
329	if [ X${FileName0} != X${NULL_STR} ] ; then
330	#
331	#IGCM_debug_Print 1 "Component : ${compname}"
332	#
333	# INITIALISATION
334	#
335	typeset i
336	if [ ${FlagToRead} ] ; then
337	((NbFiles=${FlagToRead}))
338	((i=${NbFiles}))
339	else
340	eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1
341	i=2
342	fi
343	#
344	until [ $i -gt $NbFiles ]; do
345	#
346	eval flag_post=\${${ListFilesName}[$i]} > /dev/null 2>&1
347	#
348	if [ X${flag_post} != XNONE ] ; then
349	#
350	# For each comp and each file who needs post-processing
351	# determine which variables need time series.
352	#
353	FILE=$( echo ${flag_post} \| awk "-FPost_" '{print $2}' )
354	IGCM_card_DefineArrayFromOption ${card} Post_${FILE} TimeSeriesVars${Dimension}
355	IGCM_card_DefineVariableFromOption ${card} Post_${FILE} ChunckJob${Dimension}
356	#
357	# If TimeSeriesVars list is empty we skip
358	#
359	if [ $( eval echo \${${compname}_Post_${FILE}_TimeSeriesVars${Dimension}} ) = ${NULL_STR} ] ; then
360	#
361	IGCM_debug_Print 3 "Nothing to do for ${FILE} according to ${card}"
362	IGCM_debug_Print 3 "TimeSeriesVars${Dimension} for ${FILE} is empty"
363	(( i=i+3 ))
364	continue
365	#
366	fi
367	#
368	# If files/variables has been switch off by ChunckJob${Dimension}=0 we skip
369	#
370	if [ X$( eval echo \${${compname}_Post_${FILE}_ChunckJob${Dimension}} ) = XOFF ] ; then
371	IGCM_debug_Print 3 "Nothing to do for ${FILE} according to ${card}"
372	IGCM_debug_Print 3 "ChunckJob${Dimension}=OFF for ${FILE} so it has been switched off"
373	(( i=i+3 ))
374	continue
375	fi
376	#
377	# If we are not a Chunck type task, we skip files/variables handled by chunck task
378	#
379	if ( [ ! X${TsTask} = XChunck${Dimension} ] && [ ! X${TsTask} = X ] && [ ! XChunck${Dimension} = XChunck ] ) ; then
380	if [ ! $( eval echo \${${compname}_Post_${FILE}_ChunckJob${Dimension}} ) = NONE ] ; then
381	IGCM_debug_Print 3 "Nothing to do for ${FILE} TimeSeriesVars${Dimension} according to ${card}"
382	IGCM_debug_Print 3 "Let another chunck task do the job $( eval echo \${${compname}_Post_${FILE}_ChunckJob${Dimension}} )"
383	(( i=i+3 ))
384	continue
385	fi
386	fi
387	#
388	# Now on we know we have things to do
389	#
390
391	#
392	# We need coordinates axis to properly fill produced time series
393	#
394	IGCM_card_DefineArrayFromOption ${card} Post_${FILE} GatherWithInternal
395	#
396	if [ $( eval echo \${${compname}_Post_${FILE}_GatherWithInternal} ) = ${NULL_STR} ] ; then
397	#
398	IGCM_debug_Print 1 "ERROR !! We miss coordinate axis for ${FILE} according to ${card}"
399	IGCM_debug_Print 1 "So no time series will be produced for ${FILE} !!"
400	(( i=i+3 ))
401	continue
402	#
403	fi
404	#
405	# We need LIST of variables not allready produced (useful for standalone mode)
406	#
407	FlagDir=$( echo ${FILE} \| awk -F "_" '{print $1}' )
408	case ${FlagDir} in
409	*Y) TS_Dir=TS_YE ;;
410	*M) TS_Dir=TS_MO ;;
411	*D) TS_Dir=TS_DA ;;
412	HF) TS_Dir=TS_HF ;;
413	3H) TS_Dir=TS_HF ;;
414	INS) TS_Dir=TS_INS ;;
415	esac
416	#
417	count=0
418	for var in $( eval echo \${${compname}_Post_${FILE}_TimeSeriesVars${Dimension}[*]} ) ; do
419	#
420	DIRECTORY=${R_SAVE}/${comp}/Analyse/${TS_Dir}
421	TestedFile=${config_UserChoices_JobName}_${DateBegin}_${PeriodDateEnd}_${FlagDir}_${var}.nc
422	#
423	IGCM_sys_TestFileArchive ${DIRECTORY}/${TestedFile}
424	if [ ! $? = 0 ] ; then
425	eval set +A LISTE_VARS_${FILE} \${LISTE_VARS_${FILE}[*]} ${var}
426	ActiveComp=true
427	(( count = count + 1 ))
428	fi
429	done
430	#
431	if [ ${count} -gt 0 ] ; then
432	#
433	eval set +A LISTE_FILE_${comp} \${LISTE_FILE_${comp}[*]} ${FILE}
434	eval set +A LISTE_AXIS_${FILE} \${${compname}_Post_${FILE}_GatherWithInternal[*]}
435	#
436	if [ ! X${RebuildFrequency} = Xtrue ] ; then
437	IGCM_card_DefineArrayFromOption ${card} Post_${FILE} Patches
438	eval set +A LISTE_PATCHES_${FILE} \${${compname}_Post_${FILE}_Patches[*]}
439	if [ X$( eval echo \${LISTE_PATCHES_${FILE}[0]} ) != X${NULL_STR} ]; then
440	for Patch in $( eval echo \${LISTE_PATCHES_${FILE}[*]} ); do
441	if [ Xload${Patch} != X ] ; then
442	. ${libIGCM}/libIGCM_post/IGCM_${Patch}.ksh
443	eval load${Patch}=loaded
444	fi
445	done
446	fi
447	fi
448	fi
449	fi
450	(( i=i+3 ))
451	done
452	fi
453	#
454	if [ ${ActiveComp} = true ] ; then
455	set +A ActiveListOfComponents ${ActiveListOfComponents[*]} ${comp}
456	fi
457	done
458
459	set -A config_ListOfComponents ${ActiveListOfComponents[*]}
460	[ ! -z "${ActiveListOfComponents}" ] && DoJob=true
461
462	########################################################################
463	#
464	# IS THERE SOME ALLREADY PRODUCED TIME SERIES ?
465	# IF SO BRING THEM IN THE WORKING DIRECTORY
466	#
467	# PS : Keep in mind that IGCM_sys_Get here is a weak link :
468	# - especially for IDRiS
469	# - no special protection against "command too long" !
470	# - libIGCM_sys should handle that or modify following code part
471	#
472	########################################################################
473
474	if [ ${StandAlone} != true ] ; then
475	Running_Flag=$( IGCM_sys_RshMaster "IGCM_card_DefineVariableFromOption \
476	${SUBMIT_DIR}/run.card PostProcessing TimeSeriesRunning ; \
477	echo \${run_PostProcessing_TimeSeriesRunning}" )
478
479	#if [ X${Running_Flag} = Xy ] ; then
480	# # Time Series Job allready running
481	# IGCM_debug_Print 1 "Time Series Job allready running exit"
482	# exit
483	#fi
484	# Now run.card know we are running
485
486
487
488
489	IGCM_sys_RshMaster IGCM_card_WriteOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesRunning "y"
490
491
492
493
494
495	# Get information from last execution
496	#CompletedFlag=$( IGCM_sys_RshMaster \
497	# "IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesCompleted ;\
498	# echo \${run_PostProcessing_TimeSeriesCompleted}" )
499	fi
500
501	# Is it the first submission or not ?
502
503	if ( [ X${CompletedFlag} = X ] \|\| [ X${CompletedFlag} = X$( IGCM_date_AddDaysToGregorianDate ${DateBegin} -1 ) ] ) ; then
504	# First Time Series Submission
505	FIRST_PASS=TRUE
506	Length=$( IGCM_date_DaysInPreviousPeriod ${DateBegin} ${config_UserChoices_PeriodLength} begin)
507	DATE_FIN_JOB_B=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} $(( Length - 1 )) )
508	else
509	# Last Completed Time Series
510	FIRST_PASS=FALSE
511	DATE_FIN_JOB_B=${CompletedFlag}
512	date=${DateBegin}_${DATE_FIN_JOB_B}
513	for comp in ${config_ListOfComponents[*]} ; do
514	#
515	IGCM_sys_Mkdir ${RUN_DIR_PATH}/${comp}
516	#
517	IGCM_sys_Cd ${RUN_DIR_PATH}/${comp}
518	#
519	#set -A liste_file
520	unset liste_file
521	#
522	file_path=${R_SAVE}/${comp}/Analyse
523	#
524	i=0
525	file=${NULL_STR}
526	#
527	for file in $( eval echo \${LISTE_FILE_${comp}[*]} ); do
528	#
529	# Determine in which output can we find file
530	# IE : Analyse/TS or Analyse/DA2TS or ...
531	#
532	FlagDir=$( echo ${file} \| awk -F "_" '{print $1}' )
533	case ${FlagDir} in
534	*Y) TS_Dir=TS_YE ;;
535	*M) TS_Dir=TS_MO ;;
536	*D) TS_Dir=TS_DA ;;
537	HF) TS_Dir=TS_HF ;;
538	3H) TS_Dir=TS_HF ;;
539	INS) TS_Dir=TS_INS ;;
540	esac
541	for var in $( eval echo \${LISTE_VARS_${file}[*]} ) ; do
542	#
543	#set +A liste_file ${liste_file[*]} ${file_path}/${TS_Dir}/${config_UserChoices_JobName}_${date}_${FlagDir}_${var}.nc
544	liste_file[${#liste_file[*]}]=${file_path}/${TS_Dir}/${config_UserChoices_JobName}_${date}_${FlagDir}_${var}.nc
545	#
546	done
547	done
548	if [ X${file} != X${NULL_STR} ] ; then
549	IGCM_sys_Get /l liste_file[*] ${RUN_DIR_PATH}/${comp}
550	# Even if some files are missing we tried to continue
551	# Either ListVar in compname.card are asked but not present in original history file
552	# Either a previous TS task failed
553	ExitFlag=false
554	IGCM_debug_Verif_Exit_Post
555	fi
556	done
557	#
558	LEVEL=0
559	#
560	fi
561
562	########################################################################
563	#
564	# DEFINE LOOP PARAMETERS
565	#
566	########################################################################
567
568	DATE_COUNT=${DATE_FIN_JOB_B}
569	DATE_FIN_JOB_B_LOOP=${DATE_FIN_JOB_B}
570
571	( [ -n "${LEVEL}" ] && [ ${LEVEL} -eq 0 ] ) && NBRE_FILE_TOT=0 \|\| NBRE_FILE_TOT=1
572
573	if [ ${DoJob} = true ] ; then
574	while [ ${DATE_COUNT} -lt ${PeriodDateEnd} ] ; do
575	(( NBRE_FILE_TOT = NBRE_FILE_TOT + 1 ))
576	Length=$( IGCM_date_DaysInNextPeriod ${DATE_COUNT} ${config_UserChoices_PeriodLength} )
577	DATE_COUNT=$( IGCM_date_AddDaysToGregorianDate ${DATE_COUNT} ${Length} )
578	done
579	else
580	NBRE_FILE_TOT=0
581	fi
582
583	if [ ${NBRE_FILE_TOT} -le ${UNIX_MAX_LIMIT} ] ; then
584	NBRE_TOUR=1
585	elif [ ${NBRE_FILE_TOT}%${UNIX_MAX_LIMIT} -eq 0 ] ; then
586	let NBRE_TOUR=${NBRE_FILE_TOT}/${UNIX_MAX_LIMIT}
587	else
588	let NBRE_TOUR=${NBRE_FILE_TOT}/${UNIX_MAX_LIMIT}+1
589	fi
590
591	CURRENT_LOOP=1
592	# THIS LOOP GIVES PARAMETERS FOR THE DATE'S LOOP ie : DATE_COURANTE, DATE_FIN.
593	# WE HAVE 3 LEVELS
594	# - LEVEL 1 : JUST ONE LOOP TO COMPLETE
595	# - LEVEL 2 : WE ARE IN THE "DEEP" LOOP
596	# - LEVEL 3 : WE ARE IN THE LAST LOOP
597
598	while [ ${CURRENT_LOOP} -le ${NBRE_TOUR} ] ; do
599
600	if [ ${NBRE_FILE_TOT} -le ${UNIX_MAX_LIMIT} ] ; then
601	# - LEVEL 1 : JUST ONE LOOP TO COMPLETE
602	NBRE_FILE_LOOP=${NBRE_FILE_TOT}
603
604	if [ ${FIRST_PASS} = TRUE ] ; then
605	DATE_COURANTE=${DATE_FIN_JOB_B_LOOP}
606	else
607	Length=$( IGCM_date_DaysInNextPeriod ${DATE_FIN_JOB_B_LOOP} ${config_UserChoices_PeriodLength} )
608	DATE_COURANTE=$( IGCM_date_AddDaysToGregorianDate ${DATE_FIN_JOB_B_LOOP} ${Length} )
609	fi
610
611	DATE_FIN=${PeriodDateEnd}
612	DATE_FIN_JOB_B_LOOP_PREC=${DATE_FIN_JOB_B_LOOP}
613
614	[ -n "${DATE_LOOP}" ] && DATE_FIN_JOB_B_LOOP=${DATE_LOOP}
615	[ -n "${LEVEL}" ] && FLAG_B="TRUE" \|\| FLAG_B="FALSE"
616
617	LEVEL=1
618	DEPOT="TRUE"
619	elif [ ${CURRENT_LOOP} -ne ${NBRE_TOUR} ] ; then
620	# - LEVEL 2 : WE ARE IN THE "DEEP" LOOP
621	NBRE_FILE_LOOP=${UNIX_MAX_LIMIT}
622
623	if [ ! ${FIRST_PASS} = TRUE ] && [ ${CURRENT_LOOP} -eq 1 ] ; then
624	Length=$( IGCM_date_DaysInNextPeriod ${DATE_FIN_JOB_B_LOOP} ${config_UserChoices_PeriodLength} )
625	DATE_COURANTE=$( IGCM_date_AddDaysToGregorianDate ${DATE_FIN_JOB_B_LOOP} ${Length} )
626	elif [ -z "${DATE_COURANTE}" ] ; then
627	DATE_COURANTE=${DATE_FIN_JOB_B}
628	else
629	Length=$( IGCM_date_DaysInNextPeriod ${DATE_FIN} ${config_UserChoices_PeriodLength} )
630	DATE_COURANTE=$( IGCM_date_AddDaysToGregorianDate ${DATE_FIN} ${Length} )
631	fi
632
633	(( TotLength = 0 ))
634	COMPTEUR=1
635	DATE_LOOP=${DATE_COURANTE}
636
637	while [ ${COMPTEUR} -lt ${NBRE_FILE_LOOP} ] ; do
638	#
639	Length=$( IGCM_date_DaysInNextPeriod ${DATE_LOOP} ${config_UserChoices_PeriodLength} )
640	DATE_LOOP=$( IGCM_date_AddDaysToGregorianDate ${DATE_LOOP} ${Length} )
641	(( TotLength = TotLength + Length ))
642	(( COMPTEUR = COMPTEUR + 1 ))
643	#
644	done # while [ ${COMPTEUR} -le ${NBRE_FILE_LOOP} ] done
645	DATE_FIN=$( IGCM_date_AddDaysToGregorianDate ${DATE_COURANTE} ${TotLength} )
646
647	[ -n "${DATE_LOOP}" ] && DATE_FIN_JOB_B_LOOP_PREC=${DATE_FIN_JOB_B_LOOP} ; DATE_FIN_JOB_B_LOOP=${DATE_LOOP}
648	[ -n "${LEVEL}" ] && [ ${LEVEL} -eq 0 ] && FLAG_B="TRUE" \|\| [ ${CURRENT_LOOP} -gt 1 ] && FLAG_B="TRUE" \|\| FLAG_B="FALSE"
649	DEPOT="FALSE"
650	LEVEL=2
651	else
652	# - LEVEL 3 : WE ARE IN THE LAST LOOP
653	NBRE_FILE_LOOP=$(( ${NBRE_FILE_TOT} % ( ${UNIX_MAX_LIMIT} * ( ${CURRENT_LOOP} - 1 ) ) ))
654	[ ${NBRE_FILE_LOOP} -eq 0 ] && NBRE_FILE_LOOP=${UNIX_MAX_LIMIT}
655
656	Length=$( IGCM_date_DaysInNextPeriod ${DATE_FIN} ${config_UserChoices_PeriodLength} )
657	DATE_COURANTE=$(IGCM_date_AddDaysToGregorianDate ${DATE_FIN} ${Length} )
658	DATE_FIN=${PeriodDateEnd}
659	[ -n "${DATE_LOOP}" ] && DATE_FIN_JOB_B_LOOP_PREC=${DATE_FIN_JOB_B_LOOP} ; DATE_FIN_JOB_B_LOOP=${DATE_LOOP}
660
661	LEVEL=3
662	DEPOT="TRUE"
663	FLAG_B="TRUE"
664	fi
665
666	# THEN FOR EACH FILE TYPE WE LOOP BETWEEN DATE_COURANTE AND DATE_FIN.
667	for comp in ${config_ListOfComponents[*]} ; do
668	#
669	IGCM_sys_Mkdir ${RUN_DIR_PATH}/${comp}
670	#
671	IGCM_sys_Cd ${RUN_DIR_PATH}/${comp}
672	#
673	eval R_OUT_${comp}=${R_SAVE}/${comp}
674	#
675	i=0
676	#
677	for file in $( eval echo \${LISTE_FILE_${comp}[*]} ); do
678	#
679	# Determine in which output can we find file
680	# IE : Output/MO or Output/DA or ...
681	#
682	FlagDir=$( echo ${file} \| awk -F "_" '{print $1}' )
683	case ${FlagDir} in
684	*Y) TS_Dir=TS_YE ; FreqDir=YE ;;
685	*M) TS_Dir=TS_MO ; FreqDir=MO ;;
686	*D) TS_Dir=TS_DA ; FreqDir=DA ;;
687	HF) TS_Dir=TS_HF ; FreqDir=HF ;;
688	3H) TS_Dir=TS_HF ; FreqDir=HF ;;
689	INS) TS_Dir=TS_INS ; FreqDir=INS ;;
690	*)
691	IGCM_debug_Print 1 "Error in FlagDir=${FlagDir} for file ${file}."
692	IGCM_sys_Exit "Job create_ts" ;;
693	esac
694
695	# Initialize array
696	#set -A liste_file
697	#set -A liste_file_tmp
698	unset liste_file
699	unset liste_file_tmp
700	eval file_path=\${R_OUT_${comp}}/Output/${FreqDir}/
701
702	COMPTEUR=1
703	DATE_LOOP=${DATE_COURANTE}
704
705	while [ ${COMPTEUR} -le ${NBRE_FILE_LOOP} ] ; do
706	#
707	Length1=$( IGCM_date_DaysInPreviousPeriod ${DATE_LOOP} ${config_UserChoices_PeriodLength} end)
708	DATE_TAB=$( IGCM_date_AddDaysToGregorianDate ${DATE_LOOP} $(( 1 - Length1 )) )_${DATE_LOOP}
709
710	Length2=$( IGCM_date_DaysInNextPeriod ${DATE_LOOP} ${config_UserChoices_PeriodLength} )
711	DATE_LOOP=$( IGCM_date_AddDaysToGregorianDate ${DATE_LOOP} ${Length2} )
712
713	#set +A liste_file ${liste_file[*]} ${file_path}${config_UserChoices_JobName}_${DATE_TAB}_${file}.nc
714	#set +A liste_file_tmp ${liste_file_tmp[*]} ${config_UserChoices_JobName}_${DATE_TAB}_${file}.nc
715	liste_file[${#liste_file[*]}]=${file_path}${config_UserChoices_JobName}_${DATE_TAB}_${file}.nc
716	liste_file_tmp[${#liste_file_tmp[*]}]=${config_UserChoices_JobName}_${DATE_TAB}_${file}.nc
717	(( COMPTEUR = COMPTEUR + 1 ))
718	#
719	done # while [ ${COMPTEUR} -le ${NBRE_FILE_LOOP} ] done
720	DATE_LOOP=$( IGCM_date_AddDaysToGregorianDate ${DATE_LOOP} -${Length2} )
721
722	# Get selected files
723	IGCM_sys_Get /l liste_file[*] ${RUN_DIR_PATH}/${comp}
724	IGCM_debug_Verif_Exit_Post
725
726	# Apply IGCM_Patch if needed
727	if [ ! X${RebuildFrequency} = Xtrue ] ; then
728	if [ X$( eval echo \${LISTE_PATCHES_${file}[0]} ) != X${NULL_STR} ]; then
729	for file_t in $( eval echo ${liste_file_tmp[*]} ); do
730	for Patch in $( eval echo \${LISTE_PATCHES_${file}[*]} ); do
731	IGCM_${Patch} ${file_t}
732	IGCM_debug_Verif_Exit_Post
733	done
734	done
735	fi
736	fi
737
738	# WE CAN CONCATENATE FILES AT THIS POINT
739	[ "${FLAG_B}" = "TRUE" ] && DATE_BUILD_B=${DateBegin}_${DATE_FIN_JOB_B_LOOP_PREC}
740	Length=$( IGCM_date_DaysInPreviousPeriod ${DATE_COURANTE} ${config_UserChoices_PeriodLength} end)
741	DATE_BUILD1=$( IGCM_date_AddDaysToGregorianDate ${DATE_COURANTE} -$(( Length - 1 )) )
742	DATE_BUILD=${DATE_BUILD1}_${DATE_FIN}
743	DATE_BUILD_END=${DateBegin}_${DATE_FIN}
744
745	liste_coord=" "
746	for axis in $( eval echo \${LISTE_AXIS_${file}[*]} ); do
747	liste_coord=${liste_coord}${axis}","
748	done
749
750	# Time axis must be the last dimension
751	time_axis=${axis}
752
753	# SWITCH BETWEEN MODEL TO FIT PARTICULAR CASE
754	for var in $( eval echo \${LISTE_VARS_${file}[*]} ) ; do
755	#
756	if [ "${FLAG_B}" = "TRUE" ] ; then
757	# WE CONCATENATE WITH EXISTING FILES
758	file1=${config_UserChoices_JobName}_${DATE_BUILD_B}_${FlagDir}_${var}.nc
759	file_out=${config_UserChoices_JobName}_${DATE_BUILD_END}_${FlagDir}_${var}.nc
760	IGCM_sys_ncrcat --hst -v ${liste_coord}${var} ${file1} ${liste_file_tmp[*]} ${file_out}
761	#
762	IGCM_sys_Rm ${file1}
763	if [ ! "${DEPOT}" = "TRUE" ] ; then
764	eval IGCM_sys_Put_Out ${file_out} \${R_OUT_${comp}}/Analyse/${TS_Dir}/${file_out}
765	# "${file1} = file_before ?
766	[ ! "${file1}" = "${config_UserChoices_JobName}_${DateBegin}_${DATE_FIN_JOB_B}_${FlagDir}_${var}.nc" ] && eval MENAGE \${R_OUT_${comp}}/Analyse/${TS_Dir} ${file1} ${file_out}
767	fi
768
769	ExitFlag=false
770	else
771	# OR NOT
772	IGCM_sys_ncrcat --hst -v ${liste_coord}${var} ${liste_file_tmp[*]} ${config_UserChoices_JobName}_${DATE_BUILD}_${FlagDir}_${var}.nc
773	fi
774
775	#
776	if [ "${DEPOT}" = "TRUE" ] ; then
777	# WE PUT FINAL FILE ON FILE SYSTEM
778	[ "${FLAG_B}" = "FALSE" ] && file_out=${config_UserChoices_JobName}_${DATE_BUILD}_${FlagDir}_${var}.nc
779	file_before=${config_UserChoices_JobName}_${DateBegin}_${DATE_FIN_JOB_B}_${FlagDir}_${var}.nc
780	#
781	eval IGCM_sys_Put_Out ${file_out} \${R_OUT_${comp}}/Analyse/${TS_Dir}/${file_out}
782	[ "${FLAG_B}" = "TRUE" ] && eval MENAGE \${R_OUT_${comp}}/Analyse/${TS_Dir} ${file_before} ${file_out}
783	if [ ! "X${file1}" = "X" ] ; then
784	[ ! "${file1}" = "${config_UserChoices_JobName}_${DateBegin}_${DATE_FIN_JOB_B}_${FlagDir}_${var}.nc" ] && eval MENAGE \${R_OUT_${comp}}/Analyse/${TS_Dir} ${file1} ${file_out}
785	fi
786	#
787	if ( [ ${FlagDir} = "1M" ] && [ -f ${file_out} ] ) ; then
788	file_before_YE=${config_UserChoices_JobName}_${DateBegin}_${DATE_FIN_JOB_B}_1Y_${var}.nc
789	file_out_YE=${config_UserChoices_JobName}_${DATE_BUILD_END}_1Y_${var}.nc
790	#
791	# Compute yearly average considering calendar
792	# and set date of the mid year to 01/07 at 00:00
793	IGCM_sys_cdo -settime,00:00 -setday,1 -setmon,7 -settunits,days -divdpy -yearsum -muldpm -selvar,${var} ${file_out} ${file_out_YE}
794	# Extract all ancillary variables except $var, they will be appended after the cdo command
795	# Needed because cdo applies calculs on all variables
796	IGCM_sys_ncks -Oh -x -v ${var} ${file_out} ${file_out_YE%%.nc}_tmp1.nc
797	# This will remove the time axis because cdo rewrites severely with only considered useful variables
798	IGCM_sys_cdo -mulc,1 ${file_out_YE%%.nc}_tmp1.nc ${file_out_YE%%.nc}_tmp2.nc
799	if [ $? -eq 0 ] ; then
800	# Now append all ancillary variables if previous cdo operator ok
801	IGCM_sys_ncks -h -A ${file_out_YE%%.nc}_tmp2.nc ${file_out_YE}
802	fi
803
804	# Put global history attribut
805	IGCM_sys_ncatted -Oh -a history,global,o,c,"build by libIGCM/create_ts" ${file_out_YE}
806	#
807	eval IGCM_sys_Put_Out ${file_out_YE} \${R_OUT_${comp}}/Analyse/TS_MO_YE/${file_out_YE}
808	[ "${FLAG_B}" = "TRUE" ] && eval MENAGE \${R_OUT_${comp}}/Analyse/TS_MO_YE/ ${file_before_YE} ${file_out_YE}
809	IGCM_sys_Rm ${file_out_YE%%.nc}_tmp*.nc
810	fi
811	#
812	IGCM_sys_Rm ${file_out}
813	ExitFlag=false
814	#
815	fi
816	#
817	done # for var in ${liste_var} ; do
818	IGCM_sys_Rm ${liste_file_tmp[*]}
819	done # for file in ${liste_file_brut} do
820	done # for comp in ${config_ListOfComponents[*]} ; do
821	# GO AHEAD IN DEEPEST LOOP
822	(( CURRENT_LOOP = CURRENT_LOOP + 1 ))
823	done # while [ ${CURRENT_LOOP} -le ${NBRE_TOUR} ] do
824	# FINISH
825
826	# DODS copy
827	for comp in ${config_ListOfComponents[*]} ; do
828	for TS_Dir in TS_YE TS_MO TS_MO_YE TS_DA TS_HF TS_INS ; do
829	IGCM_sys_TestDirArchive ${R_SAVE}/${comp}/Analyse/${TS_Dir}
830	[ $? = 0 ] && IGCM_sys_Put_Dods ${comp}/Analyse/${TS_Dir}
831	done
832	done
833
834	export POST_DIR; export SUBMIT_DIR; export libIGCM; export R_INIT; export R_BC; export StandAlone
835	export RESOL_ATM; export RESOL_OCE ; export RESOL_ICE ; export RESOL_MBG ; export RESOL_SRF ; export RESOL_SBG
836
837	listVarEnv="POST_DIR,SUBMIT_DIR,libIGCM,R_INIT,R_BC,StandAlone,RESOL_ATM,RESOL_OCE,RESOL_ICE,RESOL_MBG,RESOL_SRF,RESOL_SBG"
838	export listVarEnv
839
840	#D-
841	# --------------------------------------------------------------------
842	#D- Test if all was right
843	# --------------------------------------------------------------------
844	IGCM_debug_Verif_Exit_Post
845	# --------------------------------------------------------------------
846	#D- Submit MONITORING
847	# --------------------------------------------------------------------
848	if ( [ X${TsTask} = X2D ] \|\| [ X${TsTask} = X3D ] \|\| [ X${TsTask} = X ] ) ; then
849	Script_Post_Output=monitoring.${PeriodDateEnd}
850	IGCM_sys_QsubPost monitoring
851	fi
852
853	#D-
854	# --------------------------------------------------------------------
855	#D- Update the run.card
856	# --------------------------------------------------------------------
857	if [ ${StandAlone} != true ] ; then
858	# Put in run.card end period of time series
859	[ X"${DATE_FIN}" = X ] \|\| IGCM_sys_RshMaster IGCM_card_WriteOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesCompleted "${DATE_FIN}"
860	# We have finish the job !
861	IGCM_sys_RshMaster IGCM_card_WriteOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesRunning "n"
862	fi
863
864	# Clean RUN_DIR_PATH (necessary for cesium)
865	IGCM_sys_RmRunDir -Rf ${RUN_DIR_PATH}
866
867	date

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