[704] | 1 | #-Q- curie #!/bin/ksh |
---|
[619] | 2 | #-Q- curie ###################### |
---|
| 3 | #-Q- curie ## CURIE TGCC/CEA ## |
---|
| 4 | #-Q- curie ###################### |
---|
[1030] | 5 | #-Q- curie #MSUB -r ::Jobname:: # Job Name |
---|
| 6 | #-Q- curie #MSUB -o Script_Output_::Jobname::.000001 # standard output |
---|
| 7 | #-Q- curie #MSUB -e Script_Output_::Jobname::.000001 # error output |
---|
[619] | 8 | #-Q- curie #MSUB -eo |
---|
[1149] | 9 | #-Q- curie #MSUB -n ::JobNumProcTot:: # Number of MPI tasks (SPMD case) or cores (MPMD case) |
---|
[1030] | 10 | #-Q- curie #MSUB -T 86400 # Wall clock limit (seconds) |
---|
| 11 | #-Q- curie #MSUB -q standard # thin nodes |
---|
[837] | 12 | #-Q- curie #MSUB -A ::default_project:: |
---|
[1108] | 13 | #-Q- curie |
---|
| 14 | #-Q- curie # Below specific options that can be activated |
---|
| 15 | #-Q- curie ##MSUB -q ivybridge # Option for Airain |
---|
| 16 | #-Q- curie ##MSUB -N 8 # Number of nodes (16 cores per node) |
---|
[1149] | 17 | #-Q- curie ##MSUB -c 8 # Number of openMP threads. To specify only for SMPD |
---|
| 18 | #-Q- curie ##MSUB -x # exclusive node. To specify only for MPMD together with the one below |
---|
[1108] | 19 | #-Q- curie ##MSUB -E '--cpu_bind=none' |
---|
| 20 | #-Q- curie |
---|
[619] | 21 | #-Q- curie BATCH_NUM_PROC_TOT=$BRIDGE_MSUB_NPROC |
---|
[681] | 22 | #-Q- curie set +x |
---|
[770] | 23 | #-Q- ada #!/bin/ksh |
---|
| 24 | #-Q- ada # ###################### |
---|
[929] | 25 | #-Q- ada # ## ADA IDRIS ## |
---|
[770] | 26 | #-Q- ada # ###################### |
---|
[1108] | 27 | #-Q- ada # Job name |
---|
[770] | 28 | #-Q- ada # @ job_name = ::Jobname:: |
---|
[1108] | 29 | #-Q- ada # Job type |
---|
[770] | 30 | #-Q- ada # @ job_type = parallel |
---|
[1108] | 31 | #-Q- ada # Standard output file name |
---|
[770] | 32 | #-Q- ada # @ output = Script_Output_::Jobname::.000001 |
---|
[1108] | 33 | #-Q- ada # Error output file name |
---|
[770] | 34 | #-Q- ada # @ error = Script_Output_::Jobname::.000001 |
---|
[1108] | 35 | #-Q- ada # Total number of tasks |
---|
[770] | 36 | #-Q- ada # @ total_tasks = ::JobNumProcTot:: |
---|
| 37 | #-Q- ada # @ environment = "BATCH_NUM_PROC_TOT=::JobNumProcTot::" |
---|
[1108] | 38 | #-Q- ada # Maximum CPU time per task hh:mm:ss |
---|
[770] | 39 | #-Q- ada # @ wall_clock_limit = 1:00:00 |
---|
[1108] | 40 | #-Q- ada # Specific option for OpenMP parallelization: Number of OpenMP threads per MPI task |
---|
[787] | 41 | #-Q- ada ### @ parallel_threads = 4 |
---|
[1108] | 42 | #-Q- ada # End of the header options |
---|
[770] | 43 | #-Q- ada # @ queue |
---|
[281] | 44 | #-Q- lxiv8 ###################### |
---|
| 45 | #-Q- lxiv8 ## OBELIX LSCE ## |
---|
| 46 | #-Q- lxiv8 ###################### |
---|
| 47 | #-Q- lxiv8 #PBS -N ::Jobname:: |
---|
| 48 | #-Q- lxiv8 #PBS -m a |
---|
| 49 | #-Q- lxiv8 #PBS -j oe |
---|
[1126] | 50 | #-Q- lxiv8 #PBS -q mediump |
---|
[281] | 51 | #-Q- lxiv8 #PBS -o Script_Output_::Jobname::.000001 |
---|
| 52 | #-Q- lxiv8 #PBS -S /bin/ksh |
---|
| 53 | #-Q- lxiv8 #PBS -v BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
---|
| 54 | #-Q- lxiv8 #PBS -l nodes=1:ppn=::JobNumProcTot:: |
---|
[2] | 55 | #-Q- default #!/bin/ksh |
---|
| 56 | #-Q- default ################## |
---|
| 57 | #-Q- default ## DEFAULT HOST ## |
---|
| 58 | #-Q- default ################## |
---|
[815] | 59 | #-Q- default #For MPI use, uncomment next line : |
---|
[2] | 60 | #-Q- default #BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
---|
| 61 | |
---|
[373] | 62 | #************************************************************** |
---|
| 63 | # Author: Sebastien Denvil |
---|
| 64 | # Contact: Sebastien.Denvil__at__ipsl.jussieu.fr |
---|
| 65 | # $Revision:: $ Revision of last commit |
---|
| 66 | # $Author:: $ Author of last commit |
---|
| 67 | # $Date:: $ Date of last commit |
---|
[2] | 68 | # IPSL (2006) |
---|
| 69 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
---|
[373] | 70 | # |
---|
| 71 | #************************************************************** |
---|
[2] | 72 | |
---|
| 73 | #set -eu |
---|
| 74 | #set -vx |
---|
| 75 | |
---|
| 76 | date |
---|
| 77 | echo |
---|
| 78 | echo "#######################################" |
---|
| 79 | echo "# ANOTHER GREAT SIMULATION #" |
---|
| 80 | echo "#######################################" |
---|
| 81 | echo |
---|
| 82 | |
---|
| 83 | #D--------------------------------------------------------------------== |
---|
| 84 | #D- |
---|
| 85 | #D- Job to launch IGCM models |
---|
| 86 | #D- |
---|
| 87 | #D--------------------------------------------------------------------== |
---|
| 88 | #D- |
---|
| 89 | |
---|
| 90 | MODIPSL=::modipsl:: |
---|
| 91 | libIGCM=${MODIPSL}/libIGCM |
---|
| 92 | |
---|
| 93 | #D--------------------------------------------------------------------== |
---|
[815] | 94 | #D- -1. PLACE FOR USER MODIFICATION |
---|
| 95 | #D- - Job Verbosity |
---|
| 96 | #D- - PeriodNb |
---|
| 97 | #D- - Experience type : DEB(ug), DEV(elopment), RUN |
---|
[2] | 98 | #D--------------------------------------------------------------------== |
---|
| 99 | |
---|
[815] | 100 | #D- Task type (computing or post-processing) |
---|
| 101 | TaskType=computing |
---|
[2] | 102 | #D- Increased verbosity (1, 2, 3) |
---|
| 103 | Verbosity=3 |
---|
[475] | 104 | #D- Experience type : DEB(ug), DEV(elopment), RUN (default) |
---|
| 105 | JobType=RUN |
---|
[2] | 106 | #D- Number of execution in one job |
---|
[185] | 107 | PeriodNb=1 |
---|
| 108 | #-Q- sx9mercure PeriodNb=60 |
---|
[2] | 109 | |
---|
| 110 | #D- |
---|
[815] | 111 | #D- --------------------------------------------------------------------------------------------------# |
---|
| 112 | #D- ! OPTIONNAL FEATURES /!\ USE WITH CARE ! # |
---|
| 113 | #D- --------------------------------------------------------------------------------------------------# |
---|
[2] | 114 | |
---|
[475] | 115 | |
---|
[1096] | 116 | #D- Low level debug : to perform lib test checks, stack construction and IO functions instrumentation |
---|
[2] | 117 | #D- Default=true |
---|
[815] | 118 | #D- |
---|
[1095] | 119 | DEBUG_debug=true |
---|
[2] | 120 | |
---|
[988] | 121 | #D- Messaging : all activities and call stacks will be sent to ipsl servers |
---|
| 122 | #D- If true will imply DEBUG_debug=true |
---|
| 123 | #D- Default=false |
---|
| 124 | #D- |
---|
[1095] | 125 | BigBrother=true |
---|
[988] | 126 | |
---|
[2] | 127 | #D- Set DEBUG_sys to false to disable output calls of function |
---|
[988] | 128 | #D- true when JobType=DEB # means DEB(ug) |
---|
[815] | 129 | #D- |
---|
[2] | 130 | #DEBUG_sys=false |
---|
| 131 | |
---|
| 132 | #D- Define running directory |
---|
| 133 | #D- Default=${TMPDIR} ie temporary batch directory |
---|
[815] | 134 | #D- |
---|
[154] | 135 | #RUN_DIR_PATH=/workdir/or/scratchdir/of/this/machine |
---|
[2] | 136 | |
---|
| 137 | #D- Define submit directory |
---|
[92] | 138 | #D- Default= where you launch qsub (variable from scheduler) |
---|
[815] | 139 | #D- |
---|
[92] | 140 | #SUBMIT_DIR=$( pwd ) |
---|
[2] | 141 | |
---|
[475] | 142 | #D- Define input file root directory |
---|
| 143 | #D- Default=/IGCMG/common/account/of/this/machine |
---|
[815] | 144 | #D- |
---|
[475] | 145 | #R_IN=/u/rech/por/rpor111/DATA |
---|
| 146 | |
---|
[2] | 147 | #D- Turn in dry run mode ? (0,1,2,3) |
---|
| 148 | #D- Default=0 |
---|
[815] | 149 | #D- |
---|
[2] | 150 | #DRYRUN=3 |
---|
[815] | 151 | #D-# YOU HAVE TO COMPILE YOUR EXE FILES to USE DRYRUN MODE ! |
---|
| 152 | #D-# ------------------------------------------------------------------------------------- |
---|
| 153 | #D-# | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
---|
| 154 | #D-# | | Cp/Exe/param/files | | | | |
---|
| 155 | #D-# | | Chmod Qsub | | | | |
---|
| 156 | #D-# ------------------------------------------------------------------------------------- |
---|
| 157 | #D-# | 0 | yes | yes | yes | yes | |
---|
| 158 | #D-# ------------------------------------------------------------------------------------- |
---|
| 159 | #D-# | 1 | yes | yes | yes | no | |
---|
| 160 | #D-# ------------------------------------------------------------------------------------- |
---|
| 161 | #D-# | 2 | yes | yes | no | no | |
---|
| 162 | #D-# ------------------------------------------------------------------------------------- |
---|
| 163 | #D-# | 3 | yes | no | no | no | |
---|
| 164 | #D-# ------------------------------------------------------------------------------------- |
---|
[2] | 165 | |
---|
[475] | 166 | #D- |
---|
| 167 | # --------------------------------------------------------------------------------------------------# |
---|
[815] | 168 | #D- ! END OF OPTIONNAL FEATURES /!\ DO NOT MODIFY ANYTHING BELOW UNLESS YOU KNOW WHAT YOU ARE DOING # |
---|
[475] | 169 | # --------------------------------------------------------------------------------------------------# |
---|
[2] | 170 | |
---|
| 171 | #D- |
---|
| 172 | #D--------------------------------------------------------------------== |
---|
[1051] | 173 | #D- 0.0 SYSTEM ENVIRONMENT |
---|
| 174 | #D- - Define variables for Number of processors |
---|
| 175 | #D- - Define MPI variables |
---|
| 176 | #D- - Define batch scheduler variables |
---|
| 177 | #D- - Source IGCM Library |
---|
| 178 | #D- - Get RESOLution in .resol file (temporary) |
---|
[2] | 179 | #D--------------------------------------------------------------------== |
---|
| 180 | |
---|
[815] | 181 | #---------------------------------------------------------------------== |
---|
[2] | 182 | |
---|
| 183 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
---|
| 184 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
---|
| 185 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
---|
| 186 | #------- |
---|
| 187 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
---|
| 188 | . ${libIGCM}/libIGCM_config/libIGCM_config.ksh |
---|
| 189 | . ${libIGCM}/libIGCM_comp/libIGCM_comp.ksh |
---|
| 190 | . ${libIGCM}/libIGCM_post/libIGCM_post.ksh |
---|
[832] | 191 | #------- |
---|
| 192 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
---|
| 193 | ( ${DEBUG_debug} ) && IGCM_card_Check |
---|
| 194 | ( ${DEBUG_debug} ) && IGCM_date_Check |
---|
[2] | 195 | |
---|
[815] | 196 | #--------------------------------------------------------------------== |
---|
[2] | 197 | |
---|
| 198 | #-- Resolution FLAG for oasis input |
---|
[511] | 199 | #RESOL="ORCA2xLMD9671" |
---|
[138] | 200 | [ -f ${SUBMIT_DIR}/../.resol ] && RESOL=$(head -1 ${SUBMIT_DIR}/../.resol) |
---|
[511] | 201 | #-- Chemistrie FLAG to ease chemistries configurations management |
---|
| 202 | #CHEM="AER" |
---|
[815] | 203 | [ -f ${SUBMIT_DIR}/../.chimie ] && eval $(grep CHEM ${SUBMIT_DIR}/../.chimie) |
---|
[2] | 204 | |
---|
| 205 | #D- |
---|
| 206 | #D--------------------------------------------------------------------== |
---|
[1051] | 207 | #D- 0.1 COMMON ENVIRONMENT |
---|
| 208 | #D- - Read libIGCM compatibility version in config.card |
---|
| 209 | #D- - Read UserChoices section |
---|
| 210 | #D- - Read Ensemble section |
---|
| 211 | #D- - Read Post section |
---|
| 212 | #D- - Define all netcdf output directories |
---|
| 213 | #D--------------------------------------------------------------------== |
---|
| 214 | IGCM_config_CommonConfiguration ${SUBMIT_DIR}/config.card |
---|
| 215 | |
---|
[1053] | 216 | if [ ! -r ${SUBMIT_DIR}/run.card ] ; then |
---|
| 217 | #================================================# |
---|
| 218 | # The file run.card doesn't exist # |
---|
| 219 | #================================================# |
---|
| 220 | FirstInitialize=true |
---|
| 221 | #copy initial run.card |
---|
| 222 | IGCM_sys_Cp ${SUBMIT_DIR}/run.card.init ${SUBMIT_DIR}/run.card |
---|
| 223 | IGCM_debug_Print 2 "run.card copied from run.card.init" |
---|
| 224 | else |
---|
| 225 | FirstInitialize=false |
---|
| 226 | IGCM_debug_Print 2 "run.card exists" |
---|
| 227 | fi |
---|
| 228 | |
---|
[1051] | 229 | # ------------------------------------------------------------------ |
---|
| 230 | # Activate BigBrother so as to supervise this simulation |
---|
| 231 | # ------------------------------------------------------------------ |
---|
| 232 | IGCM_debug_ActivateBigBro |
---|
| 233 | |
---|
| 234 | #D- |
---|
| 235 | #D--------------------------------------------------------------------== |
---|
[815] | 236 | #D- 1. INITIALIZE CONFIGURATION |
---|
| 237 | #D- - Simulation configuration |
---|
| 238 | #D- - Simulation parameters |
---|
| 239 | #D- - Execution parameter |
---|
| 240 | #D- - Define input files directory |
---|
| 241 | #D- - Read or initialize CumulPeriod |
---|
| 242 | #D- - run.card |
---|
[1051] | 243 | #D--------------------------------------------------------------------== |
---|
[2] | 244 | IGCM_config_Initialize |
---|
| 245 | |
---|
| 246 | # --------------------------------------------------------------------== |
---|
[815] | 247 | # Define, create and cd RUN_DIR |
---|
[2] | 248 | # --------------------------------------------------------------------== |
---|
[804] | 249 | RUN_DIR=${RUN_DIR_PATH}/${config_UserChoices_JobName}.${$} |
---|
[2] | 250 | IGCM_sys_MkdirWork ${RUN_DIR} |
---|
| 251 | IGCM_sys_Cd ${RUN_DIR} |
---|
| 252 | |
---|
[436] | 253 | # ------------------------------------------------------------------ |
---|
| 254 | # Test if all was right before proceeding further |
---|
| 255 | # ------------------------------------------------------------------ |
---|
[432] | 256 | IGCM_debug_Verif_Exit |
---|
| 257 | |
---|
[2] | 258 | #D- |
---|
[815] | 259 | #D---------------------------------------------------------------------== |
---|
| 260 | #D- 2. INITIALIZE ALL COMPONENT OF THE CONFIGURATION |
---|
| 261 | #D- - Define component executable |
---|
| 262 | #D- - Define Write Frequency by component "1M" "1D" ... |
---|
| 263 | #D- - Source ${comp}.driver |
---|
| 264 | #D- - Define Storage Places by component |
---|
| 265 | #D- - ${comp}_Initialize : |
---|
| 266 | #D- - Patterns to sed |
---|
| 267 | #D- - Variables from namelist |
---|
| 268 | #D---------------------------------------------------------------------== |
---|
[2] | 269 | IGCM_comp_Initialize |
---|
| 270 | |
---|
[815] | 271 | #D- |
---|
| 272 | #D---------------------------------------------------------------------== |
---|
| 273 | #D- 3. PERFORM GENERAL VERIFICATION |
---|
| 274 | #D- - Verify compatibility of period length, write frequencies, ... |
---|
| 275 | #D- - Verify compatibility of rebuild choices and post-process choices |
---|
| 276 | #D- - Will stop here if something is wrong |
---|
| 277 | #D---------------------------------------------------------------------== |
---|
[380] | 278 | IGCM_config_Check |
---|
[2] | 279 | |
---|
[380] | 280 | # ------------------------------------------------------------------ |
---|
[815] | 281 | # Test if all was right before entering the period loop |
---|
[380] | 282 | # ------------------------------------------------------------------ |
---|
| 283 | IGCM_debug_Verif_Exit |
---|
| 284 | |
---|
[815] | 285 | #D- |
---|
| 286 | #D---------------------------------------------------------------------== |
---|
| 287 | #D- 4. ENTER THE DEEP EXECUTION LOOP |
---|
| 288 | #D- ! FASTEN YOUR SEAT BELTS PLEASE. ! |
---|
| 289 | #D- ! WE WILL CROSS TURBULENCES. ! |
---|
| 290 | #D---------------------------------------------------------------------== |
---|
[2] | 291 | |
---|
| 292 | Period=1 |
---|
| 293 | |
---|
[120] | 294 | PeriodContinue=false |
---|
| 295 | if [ ${Period} -le ${PeriodNb} ]; then |
---|
[815] | 296 | PeriodContinue=true |
---|
[120] | 297 | fi |
---|
| 298 | while ( ${PeriodContinue} ) ; do |
---|
| 299 | |
---|
[785] | 300 | echo |
---|
| 301 | echo "Starting iteration ${Period} / ${PeriodNb}" |
---|
[2] | 302 | |
---|
[785] | 303 | #D- |
---|
| 304 | # ------------------------------------------------------------------ |
---|
[815] | 305 | #D- 4.1 COMPUTE AND DEFINE DATE INFORMATION. |
---|
| 306 | #D- - ${PeriodDateBegin} |
---|
| 307 | #D- - ${PeriodDateEnd} |
---|
| 308 | #D- - ${CumulPeriod} |
---|
| 309 | #D- - ${DatesPeriod}=${PeriodDateBegin}_${PeriodDateEnd} |
---|
| 310 | #D- - ${PeriodLength} => JOURS=31 , 28, 29, 30 ; MOIS=0 ; ANS=0 |
---|
| 311 | #D- - update run.card value |
---|
[785] | 312 | # ------------------------------------------------------------------ |
---|
| 313 | IGCM_config_PeriodStart |
---|
[2] | 314 | |
---|
[785] | 315 | #D- |
---|
| 316 | # ------------------------------------------------------------------ |
---|
[815] | 317 | #D- 4.2 BEGIN COMPUTATION ONLY IF NEEDED |
---|
[785] | 318 | # ------------------------------------------------------------------ |
---|
| 319 | if [ ${SimulationLengthInDays} -gt ${ExperienceLengthInDays} ] ; then |
---|
| 320 | IGCM_debug_Print 1 "break because '${SimulationLengthInDays} -gt ${ExperienceLengthInDays}' : ${SimulationLengthInDays} -gt ${ExperienceLengthInDays}" |
---|
| 321 | break ; |
---|
| 322 | fi |
---|
[2] | 323 | |
---|
[785] | 324 | #D- |
---|
| 325 | # ------------------------------------------------------------------ |
---|
[815] | 326 | #D- 4.3 CALL OPTIONNAL FUNCTION WITHIN DRIVER |
---|
| 327 | #D- - to set special variables used in lists (Param, Init or Bc). |
---|
[785] | 328 | # ------------------------------------------------------------------ |
---|
| 329 | IGCM_comp_PeriodStart |
---|
[2] | 330 | |
---|
[785] | 331 | #D- |
---|
| 332 | # ------------------------------------------------------------------ |
---|
[815] | 333 | #D- 4.4 GET PARAMETERS TEXT FILES UPDATED BY JOB |
---|
| 334 | #D- - (.def, namelist ...) |
---|
| 335 | #D- - READ AND USE BY GCM AT EACH EXECUTION. |
---|
[785] | 336 | # ------------------------------------------------------------------ |
---|
| 337 | IGCM_comp_GetInputParametersFiles |
---|
[262] | 338 | |
---|
[785] | 339 | #D- |
---|
| 340 | # ------------------------------------------------------------------ |
---|
[815] | 341 | #D- 4.5 GET INITIAL STATE |
---|
| 342 | #D- - (Etat0, carteveg,relief...) |
---|
| 343 | #D- - NECESSARY ONLY IF CumulPeriod= (=> NUMERO) == 1 |
---|
| 344 | #D- - AND ???_Restart=NO |
---|
| 345 | #D- - READ AND USE BY GCM FOR ONLY ONE EXECUTION. |
---|
[785] | 346 | # ------------------------------------------------------------------ |
---|
| 347 | IGCM_comp_GetInputInitialStateFiles |
---|
[2] | 348 | |
---|
[785] | 349 | #D- |
---|
| 350 | # ------------------------------------------------------------------ |
---|
[815] | 351 | #D- 4.6 GET BOUNDARIES CONDITIONS |
---|
| 352 | #D- - (SST, WIND[X,Y,Z], LAI ...) |
---|
| 353 | #D- - READ AND USE BY GCM AT EACH EXECUTION. |
---|
[785] | 354 | # ------------------------------------------------------------------ |
---|
| 355 | IGCM_comp_GetInputBoundaryFiles |
---|
[2] | 356 | |
---|
[785] | 357 | #D- |
---|
| 358 | # ------------------------------------------------------------------ |
---|
[815] | 359 | #D- 4.7 GET SmoothFiles CONDITIONS |
---|
| 360 | #D- - (SST, WIND[X,Y,Z], LAI ...) |
---|
| 361 | #D- - READ AND USE BY GCM AT EACH EXECUTION |
---|
| 362 | #D- - Do not change at each ${Period} |
---|
[785] | 363 | # ------------------------------------------------------------------ |
---|
[815] | 364 | IGCM_comp_GetInputSmoothFiles |
---|
[2] | 365 | |
---|
[785] | 366 | #D- |
---|
| 367 | # ------------------------------------------------------------------ |
---|
[815] | 368 | #D- 4.8 GET RESTART FILES |
---|
| 369 | #D- - (restartphy.nc, orca_restart.nc ...) |
---|
| 370 | #D- - READ AND USE BY GCM AT EACH EXECUTION. |
---|
[785] | 371 | #D- |
---|
[815] | 372 | #D- - IF A COMPONENT DO NOT RESTART FROM PREVIOULSY COMPUTED RESTART |
---|
| 373 | #D- - ONLY IF CumulPeriod= (=> NUMERO) == 1 |
---|
| 374 | #D- - MUST EXECUTE CREATE ETAT0_LIMIT (TYPICALLY LMDZ AND ./create_etat0_limit.e) |
---|
[785] | 375 | #D- |
---|
[815] | 376 | #D- - IF CumulPeriod == 1 |
---|
| 377 | #D- - AND A COMPONENT RESTART FROM PREVIOULSY COMPUTED RESTART |
---|
| 378 | #D- - MUST BRING THIS RESTART IN ${RUN_DIR_PATH} |
---|
[785] | 379 | #D- |
---|
[815] | 380 | #D- - ELSE BRING RESTART FROM ${JobName} IN ${RUN_DIR_PATH} |
---|
[785] | 381 | # ------------------------------------------------------------------ |
---|
| 382 | IGCM_comp_GetInputRestartFiles |
---|
[2] | 383 | |
---|
[785] | 384 | # ------------------------------------------------------------------ |
---|
[815] | 385 | # Test if all was right before Update |
---|
[785] | 386 | # ------------------------------------------------------------------ |
---|
| 387 | IGCM_debug_Verif_Exit |
---|
[2] | 388 | |
---|
[815] | 389 | #D- |
---|
[785] | 390 | # ------------------------------------------------------------------ |
---|
[815] | 391 | #D- 4.9 ACTIVATE RUNNING ENVIRONNEMENT VARIABLES |
---|
[785] | 392 | # ------------------------------------------------------------------ |
---|
| 393 | IGCM_sys_activ_variables |
---|
[2] | 394 | |
---|
[785] | 395 | #D- |
---|
| 396 | # ------------------------------------------------------------------ |
---|
[815] | 397 | #D- 4.10 UPDATE ParametersFiles |
---|
| 398 | #D- - (.def, namelist ...) |
---|
| 399 | #D- - with current value of (ORCA_NIT00, ORCA_LRSTAR, RAZ_DATE, ...) |
---|
[785] | 400 | # ------------------------------------------------------------------ |
---|
| 401 | IGCM_comp_Update |
---|
| 402 | |
---|
| 403 | # ------------------------------------------------------------------ |
---|
[815] | 404 | # Test if all was right before execution |
---|
[785] | 405 | # ------------------------------------------------------------------ |
---|
| 406 | IGCM_debug_Verif_Exit |
---|
| 407 | |
---|
| 408 | #D- |
---|
[815] | 409 | #D---------------------------------------------------------------------== |
---|
| 410 | #D- 5. EXECUTION |
---|
| 411 | #D---------------------------------------------------------------------== |
---|
[785] | 412 | |
---|
| 413 | echo |
---|
| 414 | echo "#######################################" |
---|
| 415 | echo "# DIR BEFORE RUN EXECUTION #" |
---|
| 416 | echo "#######################################" |
---|
| 417 | echo |
---|
| 418 | ls -lrt |
---|
| 419 | |
---|
| 420 | echo "========================================================================" |
---|
| 421 | if [ ${DRYRUN} -le 1 ] ; then |
---|
| 422 | REAL_DATE_INIT=$( date ) |
---|
| 423 | echo > ${Exe_Output} |
---|
| 424 | echo "#######################################" >> ${Exe_Output} |
---|
| 425 | echo "EXECUTION of : ${EXECUTION}" |
---|
| 426 | echo "EXECUTION of : ${EXECUTION}" >> ${Exe_Output} |
---|
| 427 | echo >> ${Exe_Output} |
---|
| 428 | typeset RET |
---|
| 429 | RUN_DATE_BEGIN=$( date '+%Y-%m-%dT%H:%M:%S' ) |
---|
| 430 | ${EXECUTION} >> ${Exe_Output} 2>&1 |
---|
| 431 | RET=$? |
---|
| 432 | RUN_DATE_END=$( date '+%Y-%m-%dT%H:%M:%S' ) |
---|
| 433 | if [ ${RET} -gt 0 ] ; then |
---|
| 434 | echo "Return code of executable :" ${RET} |
---|
| 435 | IGCM_debug_Exit "EXECUTABLE" |
---|
| 436 | IGCM_sys_Mkdir ${SUBMIT_DIR}/Debug |
---|
| 437 | IGCM_sys_Cp ${Exe_Output} ${SUBMIT_DIR}/Debug/${PREFIX}_${Exe_Output}_error |
---|
| 438 | ExecutionFail=true |
---|
[2] | 439 | fi |
---|
[785] | 440 | echo >> ${Exe_Output} |
---|
| 441 | echo "#######################################" >> ${Exe_Output} |
---|
| 442 | echo "libIGCM RunDateBegin=${RUN_DATE_BEGIN}" >> ${Exe_Output} |
---|
| 443 | echo "libIGCM RunDateEnd=${RUN_DATE_END}" >> ${Exe_Output} |
---|
| 444 | echo >> ${Exe_Output} |
---|
| 445 | else |
---|
| 446 | echo "EXECUTION of : ${EXECUTION} simulated for DRYRUN = " $DRYRUN |
---|
| 447 | echo "EXECUTION of : ${EXECUTION} simulated for DRYRUN = " $DRYRUN > ${Exe_Output} |
---|
| 448 | if ( $DEBUG_debug ) ; then |
---|
| 449 | echo "FOR EXECUTION DRYRUN mode = " $DRYRUN >> stack |
---|
| 450 | fi |
---|
| 451 | fi |
---|
| 452 | echo "========================================================================" |
---|
[2] | 453 | |
---|
[785] | 454 | echo |
---|
| 455 | echo "#######################################" |
---|
| 456 | echo "# DIR AFTER RUN EXECUTION #" |
---|
| 457 | echo "#######################################" |
---|
| 458 | echo |
---|
| 459 | ls -lrt |
---|
[2] | 460 | |
---|
[785] | 461 | #D- |
---|
[815] | 462 | #D---------------------------------------------------------------------== |
---|
| 463 | #D- 6. POST EXECUTION OPERATIONS |
---|
| 464 | #D---------------------------------------------------------------------== |
---|
| 465 | |
---|
| 466 | #D- |
---|
[785] | 467 | # ------------------------------------------------------------------ |
---|
[815] | 468 | #D- 6.1. DESACTIVATE RUNNING ENVIRONNEMENT VARIABLES |
---|
[785] | 469 | # ------------------------------------------------------------------ |
---|
| 470 | IGCM_sys_desactiv_variables |
---|
[2] | 471 | |
---|
[785] | 472 | #D- |
---|
| 473 | # ------------------------------------------------------------------ |
---|
[815] | 474 | #D- 6.2. SAVE OUTPUTS |
---|
| 475 | #D- - On archive/storage machine |
---|
| 476 | #D- - netcdf outputs, restarts and text files of models |
---|
[785] | 477 | # ------------------------------------------------------------------ |
---|
| 478 | IGCM_comp_Finalize |
---|
[2] | 479 | |
---|
[785] | 480 | # ------------------------------------------------------------------ |
---|
[815] | 481 | # Test if all was right after Finalize |
---|
[785] | 482 | # ------------------------------------------------------------------ |
---|
| 483 | IGCM_debug_Verif_Exit |
---|
[2] | 484 | |
---|
[785] | 485 | #D- |
---|
| 486 | # ------------------------------------------------------------------ |
---|
[815] | 487 | #D- 6.3. CONFIGURE POST-PROCESSING |
---|
| 488 | #D- - asynchronous post-treatment (Level 0) when necessary (rebuild/pack) |
---|
| 489 | #D- - classic post-treatment (Level 1) when necessary (TimeSeries/Seasonal) |
---|
[785] | 490 | # ------------------------------------------------------------------ |
---|
| 491 | IGCM_post_Configure |
---|
[2] | 492 | |
---|
[785] | 493 | #D- |
---|
| 494 | # ------------------------------------------------------------------ |
---|
[815] | 495 | #D- 6.4. SUBMIT POST-PROCESSING |
---|
| 496 | #D- - remote rebuild or/and post-treatment process if necessary |
---|
[785] | 497 | # ------------------------------------------------------------------ |
---|
| 498 | IGCM_post_Submit |
---|
[380] | 499 | |
---|
[785] | 500 | #D- |
---|
| 501 | # ------------------------------------------------------------------ |
---|
[815] | 502 | #D- 6.5. FINALYZE CURRENT LOOP AND PREPARE NEXT ONE |
---|
| 503 | #D- - Manage executable size to save only different binary |
---|
| 504 | #D- - Write in run.card user, system and elapse time |
---|
| 505 | #D- - Check that everything went well ! No ? then we stop. |
---|
| 506 | #D- - Determine next computed period |
---|
[785] | 507 | # ------------------------------------------------------------------ |
---|
| 508 | IGCM_config_PeriodEnd |
---|
[2] | 509 | |
---|
[785] | 510 | echo "Ending iteration ${Period}" |
---|
| 511 | (( Period = Period + 1 )) |
---|
[2] | 512 | |
---|
[785] | 513 | # End loop if date end is reached |
---|
| 514 | if [ ${SimulationLengthInDays} -ge ${ExperienceLengthInDays} ] ; then |
---|
| 515 | break ; |
---|
| 516 | fi |
---|
[2] | 517 | |
---|
[785] | 518 | PeriodContinue=false |
---|
| 519 | if [ ${Period} -le ${PeriodNb} ]; then |
---|
| 520 | PeriodContinue=true |
---|
| 521 | fi |
---|
| 522 | done |
---|
[2] | 523 | |
---|
| 524 | #D- |
---|
[815] | 525 | #D---------------------------------------------------------------------== |
---|
| 526 | #D- 7. SUBMIT NEXT JOB OR SEND MAIL IF SIMULATION IS OVER. |
---|
| 527 | #D---------------------------------------------------------------------== |
---|
[2] | 528 | IGCM_config_Finalize |
---|
| 529 | |
---|
| 530 | date |
---|