| 1 | #-Q- cesium #!/bin/ksh |
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| 2 | #-Q- cesium ################################################### |
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| 3 | #-Q- cesium ## CESIUM CEA ## |
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| 4 | #-Q- cesium ## Usefull for postprocessing. AA_job not tested ## |
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| 5 | #-Q- cesium ################################################### |
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| 6 | #-Q- cesium #MSUB -r ::Jobname:: # Nom du job |
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| 7 | #-Q- cesium #MSUB -N 1 # Reservation du noeud |
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| 8 | #-Q- cesium #MSUB -n 1 # Reservation du processus |
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| 9 | #-Q- cesium #MSUB -T 86400 # Limite de temps elapsed du job |
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| 10 | #-Q- cesium #MSUB -E "-j o" |
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| 11 | #-Q- cesium #MSUB -E "-S /bin/ksh" |
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| 12 | #-Q- platine #!/usr/bin/ksh |
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| 13 | #-Q- platine ################## |
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| 14 | #-Q- platine ## PLATINE CEA ## |
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| 15 | #-Q- platine ################## |
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| 16 | #-Q- platine #BSUB -J ::Jobname:: # nom de la requete |
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| 17 | #-Q- platine #BSUB -N # message a la fin du job |
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| 18 | #-Q- platine #BSUB -o Script_Output_::Jobname::.000001 # nom du fichier de sortie |
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| 19 | #-Q- platine #BSUB -n ::JobNumProcTot:: # reservation des processeurs pour le job |
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| 20 | #-Q- platine #BSUB -W 1:00 # Limite temps |
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| 21 | #-Q- platine #BSUB -L /bin/ksh |
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| 22 | #-Q- platine BATCH_NUM_PROC_TOT=$SLURM_NPROCS |
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| 23 | #-Q- titane #!/usr/bin/ksh |
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| 24 | #-Q- titane ################## |
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| 25 | #-Q- titane ## TITANE CEA ## |
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| 26 | #-Q- titane ################## |
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| 27 | #-Q- titane #MSUB -r ::Jobname:: # nom de la requete |
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| 28 | #-Q- titane #MSUB -o Script_Output_::Jobname::.000001 # nom du fichier de sortie |
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| 29 | #-Q- titane #MSUB -n ::JobNumProcTot:: # reservation des processeurs pour le job |
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| 30 | #-Q- titane #MSUB -T 86400 # Limite temps (en secondes) |
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| 31 | #-Q- titane #MSUB -p gen2211 |
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| 32 | #-Q- titane BATCH_NUM_PROC_TOT=$BRIDGE_MSUB_NPROC |
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| 33 | #-Q- sx8brodie ####################### |
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| 34 | #-Q- sx8brodie ## SX8BRODIE IDRIS ## |
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| 35 | #-Q- sx8brodie ####################### |
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| 36 | #-Q- sx8brodie #PBS -N ::Jobname:: # nom de la requete |
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| 37 | #-Q- sx8brodie #PBS -m a # message a la fin du job |
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| 38 | #-Q- sx8brodie #PBS -j o # regroupement des sorties du job : standard error et output |
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| 39 | #-Q- sx8brodie #PBS -o Script_Output_::Jobname::.000001 # nom du fichier de sortie |
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| 40 | #-Q- sx8brodie #PBS -S /usr/bin/ksh # shell de soumission |
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| 41 | #-Q- sx8brodie #PBS -v BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
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| 42 | #-Q- sx8brodie #PBS -q ::JobClass:: # classe multi pour BATCH_NUM_PROC_TOT superieur a 2, mono sinon |
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| 43 | #-Q- sx8brodie #PBS -l cpunum_job=${BATCH_NUM_PROC_TOT} # reservation des processeurs pour le job |
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| 44 | #-Q- sx8brodie #PBS -l memsz_job=15.0gb # Limite memoire |
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| 45 | #-Q- sx8brodie #PBS -l cputim_job=1:00:00 # Limite temps |
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| 46 | #-Q- aix6 #!/usr/bin/ksh |
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| 47 | #-Q- aix6 # ###################### |
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| 48 | #-Q- aix6 # ## VARGAS IDRIS ## |
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| 49 | #-Q- aix6 # ###################### |
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| 50 | #-Q- aix6 # Nom de la requete |
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| 51 | #-Q- aix6 # @ job_name = ::Jobname:: |
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| 52 | #-Q- aix6 # Type de travail |
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| 53 | #-Q- aix6 # @ job_type = parallel |
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| 54 | #-Q- aix6 # Fichier de sortie standard |
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| 55 | #-Q- aix6 # @ output = $(job_name).$(jobid) |
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| 56 | #-Q- aix6 # Fichier de sortie erreur (le meme) |
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| 57 | #-Q- aix6 # @ error = $(job_name).$(jobid) |
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| 58 | #-Q- aix6 # Nombre de processus demandes |
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| 59 | #-Q- aix6 # @ total_tasks = ::JobNumProcTot:: |
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| 60 | #-Q- aix6 # @ environment = "BATCH_NUM_PROC_TOT=::JobNumProcTot::" |
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| 61 | #-Q- aix6 # Temps CPU max. par processus MPI hh:mm:ss |
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| 62 | #-Q- aix6 # @ wall_clock_limit = 1:00:00 |
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| 63 | #-Q- aix6 # Memoire max. utilisee par processus |
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| 64 | #-Q- aix6 # @ data_limit = 3.2gb |
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| 65 | #-Q- aix6 # Memoire stack demandee |
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| 66 | #-Q- aix6 # @ stack_limit = 0.3gb,0.3gb |
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| 67 | #-Q- aix6 # Pas d OpenMP |
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| 68 | #-Q- aix6 # @ resources = ConsumableCpus(1) |
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| 69 | #-Q- aix6 # Fin de l entete |
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| 70 | #-Q- aix6 # @ queue |
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| 71 | #-Q- ulam #!/usr/bin/ksh |
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| 72 | #-Q- ulam # #################################################### |
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| 73 | #-Q- ulam # ## ULAM IDRIS ## |
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| 74 | #-Q- ulam # ## Usefull for postprocessing. AA_job not tested ## |
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| 75 | #-Q- ulam # #################################################### |
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| 76 | #-Q- ulam # |
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| 77 | #-Q- sx8mercure #!/bin/ksh |
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| 78 | #-Q- sx8mercure ###################### |
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| 79 | #-Q- sx8mercure ## SX8MERCURE CEA ## |
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| 80 | #-Q- sx8mercure ###################### |
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| 81 | #-Q- sx8mercure #PBS -N ::Jobname:: # nom de la requete |
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| 82 | #-Q- sx8mercure #PBS -m a # message a la fin du job |
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| 83 | #-Q- sx8mercure #PBS -j o # regroupement des sorties du job : standard error et output |
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| 84 | #-Q- sx8mercure ####PBS -A gen6178 |
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| 85 | #-Q- sx8mercure #PBS -o Script_Output_::Jobname::.000001 # nom du fichier de sortie |
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| 86 | #-Q- sx8mercure #PBS -S /usr/bin/ksh # shell de soumission |
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| 87 | #-Q- sx8mercure #PBS -v BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
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| 88 | #-Q- sx8mercure #PBS -l cpunum_job=${BATCH_NUM_PROC_TOT} # reservation des processeurs pour le job |
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| 89 | #-Q- sx8mercure #PBS -l memsz_job=15.0gb # limite memoire |
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| 90 | #-Q- sx8mercure #PBS -l elapstim_req=01:00:00 # limite en temps elapsed |
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| 91 | #-Q- sx9mercure #!/bin/ksh |
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| 92 | #-Q- sx9mercure ###################### |
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| 93 | #-Q- sx9mercure ## SX9MERCURE CEA ## |
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| 94 | #-Q- sx9mercure ###################### |
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| 95 | #-Q- sx9mercure #PBS -N ::Jobname:: # nom de la requete |
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| 96 | #-Q- sx9mercure #PBS -m a # message a la fin du job |
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| 97 | #-Q- sx9mercure #PBS -j o # regroupement des sorties du job : standard error et output |
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| 98 | #-Q- sx9mercure #PBS -o Script_Output_::Jobname::.000001 # nom du fichier de sortie |
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| 99 | #-Q- sx9mercure #PBS -S /usr/bin/ksh # shell de soumission |
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| 100 | #-Q- sx9mercure #PBS -v BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
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| 101 | #-Q- sx9mercure #PBS -l cpunum_job=${BATCH_NUM_PROC_TOT} # reservation des processeurs pour le job |
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| 102 | #-Q- sx9mercure #PBS -l memsz_job=16.0gb # limite memoire |
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| 103 | #-Q- sx9mercure #PBS -l elapstim_req=24:00:00 # limite en temps elapsed |
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| 104 | #-Q- sx9mercure #PBS -A gen6178 # groupe obligatoire sur SX9 |
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| 105 | #-Q- sx9mercure #PBS -q para-sx9 # para-sx9 or prio-sx9 (for CMIP5 top priorities), bckg-sx9 (run with free slot) and test-sx9 (if elapsed<1h) |
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| 106 | #-Q- lxiv8 ###################### |
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| 107 | #-Q- lxiv8 ## OBELIX LSCE ## |
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| 108 | #-Q- lxiv8 ###################### |
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| 109 | #-Q- lxiv8 #PBS -N ::Jobname:: |
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| 110 | #-Q- lxiv8 #PBS -m a |
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| 111 | #-Q- lxiv8 #PBS -j oe |
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| 112 | #-Q- lxiv8 #PBS -q medium |
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| 113 | #-Q- lxiv8 #PBS -o Script_Output_::Jobname::.000001 |
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| 114 | #-Q- lxiv8 #PBS -S /bin/ksh |
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| 115 | #-Q- lxiv8 #PBS -v BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
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| 116 | #-Q- lxiv8 #PBS -l nodes=1:ppn=::JobNumProcTot:: |
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| 117 | #-Q- default #!/bin/ksh |
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| 118 | #-Q- default ################## |
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| 119 | #-Q- default ## DEFAULT HOST ## |
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| 120 | #-Q- default ################## |
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| 121 | #-Q- default #For MPI use, uncomment next line : |
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| 122 | #-Q- default #BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
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| 123 | |
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| 124 | #************************************************************** |
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| 125 | # Author: Sebastien Denvil |
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| 126 | # Contact: Sebastien.Denvil__at__ipsl.jussieu.fr |
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| 127 | # $Revision:: $ Revision of last commit |
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| 128 | # $Author:: $ Author of last commit |
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| 129 | # $Date:: $ Date of last commit |
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| 130 | # IPSL (2006) |
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| 131 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 132 | # |
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| 133 | #************************************************************** |
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| 134 | |
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| 135 | #set -eu |
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| 136 | #set -vx |
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| 137 | |
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| 138 | date |
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| 139 | echo |
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| 140 | echo "#######################################" |
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| 141 | echo "# ANOTHER GREAT SIMULATION #" |
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| 142 | echo "#######################################" |
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| 143 | echo |
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| 144 | |
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| 145 | #D--------------------------------------------------------------------== |
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| 146 | #D--------------------------------------------------------------------== |
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| 147 | #D- |
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| 148 | #D- Job to launch IGCM models |
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| 149 | #D- |
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| 150 | #D--------------------------------------------------------------------== |
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| 151 | #D--------------------------------------------------------------------== |
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| 152 | #D- |
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| 153 | |
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| 154 | MODIPSL=::modipsl:: |
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| 155 | libIGCM=${MODIPSL}/libIGCM |
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| 156 | |
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| 157 | #D--------------------------------------------------------------------== |
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| 158 | #D- -1. User modification place |
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| 159 | #D- - Job Verbosity |
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| 160 | #D- - PeriodNb |
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| 161 | #D- - Experience type : DEB(ug), DEV(elopment), RUN |
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| 162 | #D--------------------------------------------------------------------== |
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| 163 | |
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| 164 | #D- Increased verbosity (1, 2, 3) |
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| 165 | Verbosity=3 |
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| 166 | #D- Number of execution in one job |
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| 167 | PeriodNb=1 |
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| 168 | #-Q- sx9mercure PeriodNb=60 |
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| 169 | |
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| 170 | #D- |
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| 171 | # -------------------------------------------------------------------- |
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| 172 | #D- ! Optionnal features /!\ Use with care ! |
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| 173 | # -------------------------------------------------------------------- |
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| 174 | |
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| 175 | #D- Low level debug : to bypass lib test checks and stack construction |
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| 176 | #D- Default=true |
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| 177 | DEBUG_debug=false |
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| 178 | |
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| 179 | #D- Set DEBUG_sys to false to disable output calls of function |
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| 180 | #D- Default=true |
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| 181 | #DEBUG_sys=false |
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| 182 | |
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| 183 | #D- Experience type : DEB(ug), DEV(elopment), RUN (default) |
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| 184 | JobType=RUN |
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| 185 | |
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| 186 | #D- Define running directory |
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| 187 | #D- Default=${TMPDIR} ie temporary batch directory |
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| 188 | #RUN_DIR_PATH=/workdir/or/scratchdir/of/this/machine |
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| 189 | |
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| 190 | #D- Define submit directory |
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| 191 | #D- Default= where you launch qsub (variable from scheduler) |
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| 192 | #SUBMIT_DIR=$( pwd ) |
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| 193 | |
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| 194 | #D- Define BIG_DIR directory |
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| 195 | #D- Default=(strongly machine dependant/see libIGCM_sys for details) |
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| 196 | #BIG_DIR=/somewhere/with/lot/of/space/scratchdir/may/be |
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| 197 | |
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| 198 | #D- Turn in dry run mode ? (0,1,2,3) |
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| 199 | #D- Default=0 |
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| 200 | #DRYRUN=3 |
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| 201 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 202 | # ------------------------------------------------------------------------------------- |
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| 203 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 204 | # | | Cp/Exe param files | | Chmod | | |
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| 205 | # | | Qsub | | | | |
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| 206 | # ------------------------------------------------------------------------------------- |
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| 207 | # | 0 | yes | yes | yes | yes | |
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| 208 | # ------------------------------------------------------------------------------------- |
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| 209 | # | 1 | yes | yes | yes | no | |
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| 210 | # ------------------------------------------------------------------------------------- |
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| 211 | # | 2 | yes | yes | no | no | |
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| 212 | # ------------------------------------------------------------------------------------- |
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| 213 | # | 3 | yes | no | no | no | |
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| 214 | # ------------------------------------------------------------------------------------- |
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| 215 | |
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| 216 | #D- Define input file root directory |
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| 217 | #D- Default=/IGCMG/common/account/of/this/machine |
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| 218 | #R_IN=/u/rech/por/rpor111/DATA |
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| 219 | |
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| 220 | #D- |
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| 221 | #D--------------------------------------------------------------------== |
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| 222 | #D- 0. System Environment |
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| 223 | #D- - Define variables for Number of processors |
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| 224 | #D- - Define MPI variables |
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| 225 | #D- - Define batch scheduler variables |
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| 226 | #D- - Source IGCM Library |
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| 227 | #D- - Get RESOLution in .resol file (temporary) |
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| 228 | #D--------------------------------------------------------------------== |
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| 229 | |
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| 230 | #D--------------------------------------------------------------------== |
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| 231 | |
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| 232 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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| 233 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
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| 234 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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| 235 | ( ${DEBUG_debug} ) && IGCM_card_Check |
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| 236 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
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| 237 | ( ${DEBUG_debug} ) && IGCM_date_Check |
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| 238 | #------- |
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| 239 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
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| 240 | . ${libIGCM}/libIGCM_config/libIGCM_config.ksh |
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| 241 | . ${libIGCM}/libIGCM_comp/libIGCM_comp.ksh |
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| 242 | . ${libIGCM}/libIGCM_post/libIGCM_post.ksh |
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| 243 | |
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| 244 | #D--------------------------------------------------------------------== |
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| 245 | |
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| 246 | #-- Resolution FLAG for oasis input |
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| 247 | [ -f ${SUBMIT_DIR}/../.resol ] && RESOL=$(head -1 ${SUBMIT_DIR}/../.resol) |
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| 248 | #RESOL="ORCA2xLMD9671" |
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| 249 | |
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| 250 | #D- |
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| 251 | #D--------------------------------------------------------------------== |
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| 252 | #D- 1. INITIALIZE CONFIGURATION AND THEN COMPONENTS |
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| 253 | #D--------------------------------------------------------------------== |
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| 254 | |
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| 255 | # --------------------------------------------------------------------== |
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| 256 | #D- Initialize configuration : |
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| 257 | #D- - Simulation configuration |
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| 258 | #D- - Simulation parameters |
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| 259 | #D- - Execution parameter |
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| 260 | #D- - Define input files directory |
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| 261 | #D- - Read or initialize CumulPeriod |
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| 262 | #D- - run.card |
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| 263 | #D- |
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| 264 | # --------------------------------------------------------------------== |
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| 265 | IGCM_config_Initialize |
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| 266 | |
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| 267 | # --------------------------------------------------------------------== |
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| 268 | #D- Define, create and cd RUN_DIR |
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| 269 | #D- |
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| 270 | # --------------------------------------------------------------------== |
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| 271 | RUN_DIR=${RUN_DIR_PATH}/${config_UserChoices_TagName}/${config_UserChoices_JobName}.${$} |
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| 272 | IGCM_sys_MkdirWork ${RUN_DIR} |
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| 273 | IGCM_sys_Cd ${RUN_DIR} |
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| 274 | |
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| 275 | # ------------------------------------------------------------------ |
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| 276 | # Test if all was right before proceeding further |
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| 277 | # ------------------------------------------------------------------ |
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| 278 | IGCM_debug_Verif_Exit_Post |
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| 279 | |
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| 280 | #D- |
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| 281 | # ------------------------------------------------------------------ |
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| 282 | #D- Test if all was right before proceeding further |
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| 283 | # ------------------------------------------------------------------ |
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| 284 | IGCM_debug_Verif_Exit |
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| 285 | |
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| 286 | # --------------------------------------------------------------------== |
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| 287 | #D- Initialize each components taking part |
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| 288 | #D- into simulation configuration : |
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| 289 | #D- - Define component executable |
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| 290 | #D- - Define Write Frequency by component "1M" "1D" ... |
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| 291 | #D- - Source ${comp}.driver |
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| 292 | #D- - Define Storage Places by component |
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| 293 | #D- - ${comp}_Initialize : |
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| 294 | #D- - Patterns to sed |
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| 295 | #D- - Variables from namelist |
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| 296 | #D- |
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| 297 | # --------------------------------------------------------------------== |
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| 298 | IGCM_comp_Initialize |
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| 299 | |
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| 300 | # --------------------------------------------------------------------== |
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| 301 | #D- Verify compatibility of period length, write frequencies, ... |
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| 302 | #D- Verify compatibility of rebuild choices and post-process choices |
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| 303 | #D- Will stop here if something is wrong |
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| 304 | # --------------------------------------------------------------------== |
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| 305 | IGCM_config_Check |
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| 306 | |
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| 307 | # ------------------------------------------------------------------ |
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| 308 | #D- Test if all was right before entering the period loop |
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| 309 | # ------------------------------------------------------------------ |
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| 310 | IGCM_debug_Verif_Exit |
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| 311 | |
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| 312 | #D--------------------------------------------------------------------== |
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| 313 | #D- 2. ENTER THE DEEP EXECUTION LOOP |
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| 314 | #D- !!!! FASTEN YOUR SEAT BELTS !!!! |
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| 315 | #D- !!!!! PLEASE. !!!! |
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| 316 | #D- !! WE WILL CROSS TURBULENCES. !! |
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| 317 | #D--------------------------------------------------------------------== |
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| 318 | |
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| 319 | Period=1 |
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| 320 | |
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| 321 | PeriodContinue=false |
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| 322 | if [ ${Period} -le ${PeriodNb} ]; then |
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| 323 | PeriodContinue=true |
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| 324 | fi |
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| 325 | while ( ${PeriodContinue} ) ; do |
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| 326 | |
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| 327 | echo |
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| 328 | echo "Starting iteration ${Period} / ${PeriodNb}" |
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| 329 | |
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| 330 | #D- |
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| 331 | # ------------------------------------------------------------------ |
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| 332 | #D- COMPUTE AND DEFINE DATE STUFF. |
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| 333 | # ------------------------------------------------------------------ |
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| 334 | IGCM_config_PeriodStart |
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| 335 | #D- => ${PeriodDateBegin} |
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| 336 | #D- => ${PeriodDateEnd} |
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| 337 | #D- => ${CumulPeriod} |
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| 338 | #D- => ${DatesPeriod}=${PeriodDateBegin}_${PeriodDateEnd} |
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| 339 | #D- => ${PeriodLength} => JOURS=31 , 28, 29, 30 ; MOIS=0 ; ANS=0 |
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| 340 | #D- => update run.card value |
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| 341 | |
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| 342 | #D- |
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| 343 | # ------------------------------------------------------------------ |
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| 344 | #D- BEGIN COMPUTATION ONLY IF NEEDED |
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| 345 | # ------------------------------------------------------------------ |
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| 346 | if [ ${SimulationLengthInDays} -gt ${ExperienceLengthInDays} ] ; then |
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| 347 | break ; |
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| 348 | fi |
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| 349 | |
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| 350 | #D- |
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| 351 | # ------------------------------------------------------------------ |
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| 352 | #D- Optionnal function in driver |
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| 353 | #D- to set special variables used in forward lists (Param, Init or Bc). |
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| 354 | # ------------------------------------------------------------------ |
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| 355 | IGCM_comp_PeriodStart |
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| 356 | |
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| 357 | #D- |
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| 358 | # ------------------------------------------------------------------ |
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| 359 | #D- Get parameters text files updated by job (.def, namelist ...) |
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| 360 | #D- READ AND USE BY GCM AT EACH EXECUTION. |
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| 361 | # ------------------------------------------------------------------ |
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| 362 | IGCM_comp_GetInputParametersFiles |
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| 363 | |
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| 364 | #D- |
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| 365 | # ------------------------------------------------------------------ |
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| 366 | #D- Get initial state (Etat0, carteveg,relief...) |
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| 367 | #D- NECESSARY ONLY IF CumulPeriod= (=> NUMERO) == 1 |
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| 368 | #D- AND ???_Restart=NO |
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| 369 | #D- READ AND USE BY GCM FOR ONLY ONE EXECUTION. |
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| 370 | # ------------------------------------------------------------------ |
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| 371 | IGCM_comp_GetInputInitialStateFiles |
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| 372 | |
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| 373 | #D- |
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| 374 | # ------------------------------------------------------------------ |
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| 375 | #D- Get Boundaries Conditions (SST, WIND[X,Y,Z], LAI ...) |
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| 376 | #D- READ AND USE BY GCM AT EACH EXECUTION. |
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| 377 | # ------------------------------------------------------------------ |
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| 378 | IGCM_comp_GetInputBoundaryFiles |
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| 379 | |
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| 380 | #D- |
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| 381 | # ------------------------------------------------------------------ |
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| 382 | #D- Get SmoothFiles Conditions (SST, WIND[X,Y,Z], LAI ...) |
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| 383 | #D- READ AND USE BY GCM AT EACH EXECUTION but varying in time |
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| 384 | # ------------------------------------------------------------------ |
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| 385 | IGCM_comp_GetInputSmoothFiles |
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| 386 | |
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| 387 | #D- |
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| 388 | # ------------------------------------------------------------------ |
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| 389 | #D- Get restart files (restartphy.nc, orca_restart.nc ...) |
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| 390 | #D- READ AND USE BY GCM AT EACH EXECUTION. |
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| 391 | #D- |
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| 392 | #D- IF A COMPONENT DO NOT RESTART FROM PREVIOULSY COMPUTED RESTART |
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| 393 | #D- ONLY IF CumulPeriod= (=> NUMERO) == 1 |
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| 394 | #D- MUST EXECUTE CREATE ETAT0_LIMIT (TYPICALLY LMDZ AND ./create_etat0_limit.e) |
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| 395 | #D- |
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| 396 | #D- IF CumulPeriod == 1 |
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| 397 | #D- AND A COMPONENT RESTART FROM PREVIOULSY COMPUTED RESTART |
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| 398 | #D- MUST BRING THIS RESTART IN ${RUN_DIR_PATH} |
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| 399 | #D- |
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| 400 | #D- ELSE BRING RESTART FROM ${JobName} IN ${RUN_DIR_PATH} |
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| 401 | # ------------------------------------------------------------------ |
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| 402 | IGCM_comp_GetInputRestartFiles |
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| 403 | |
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| 404 | #D- |
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| 405 | # ------------------------------------------------------------------ |
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| 406 | #D- Test if all was right before Update |
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| 407 | # ------------------------------------------------------------------ |
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| 408 | IGCM_debug_Verif_Exit |
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| 409 | |
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| 410 | # ------------------------------------------------------------------ |
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| 411 | #D- Activate running environnement variables |
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| 412 | # ------------------------------------------------------------------ |
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| 413 | IGCM_sys_activ_variables |
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| 414 | |
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| 415 | #D- |
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| 416 | # ------------------------------------------------------------------ |
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| 417 | #D- UPDATE ParametersFiles (.def, namelist ...) with |
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| 418 | #D- current value of (ORCA_NIT00, ORCA_LRSTAR, RAZ_DATE, ...) |
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| 419 | # ------------------------------------------------------------------ |
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| 420 | IGCM_comp_Update |
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| 421 | |
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| 422 | #D- |
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| 423 | # ------------------------------------------------------------------ |
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| 424 | #D- Test if all was right before execution |
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| 425 | # ------------------------------------------------------------------ |
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| 426 | IGCM_debug_Verif_Exit |
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| 427 | |
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| 428 | #D- |
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| 429 | #D----------------------------------------------------------------== |
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| 430 | #D- 3. Execution |
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| 431 | #D----------------------------------------------------------------== |
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| 432 | |
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| 433 | echo |
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| 434 | echo "#######################################" |
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| 435 | echo "# DIR BEFORE RUN EXECUTION #" |
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| 436 | echo "#######################################" |
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| 437 | echo |
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| 438 | ls -lrt |
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| 439 | |
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| 440 | echo "========================================================================" |
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| 441 | if ( [ X${BATCH_NUM_PROC_TOT} != X ] && [ "${BATCH_NUM_PROC_TOT}" -gt 1 ] ) ; then |
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| 442 | MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND} |
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| 443 | eval MPIRUN_OPTIONS=${config_UserChoices_JobRunOptions} |
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| 444 | else |
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| 445 | MPIRUN_COMMAND=${MPIRUN_COMMAND:="time "} |
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| 446 | MPIRUN_OPTIONS=${MPIRUN_OPTIONS:=""} |
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| 447 | fi |
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| 448 | |
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| 449 | if [ ${DRYRUN} -le 1 ] ; then |
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| 450 | REAL_DATE_INIT=$( date ) |
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| 451 | echo "EXECUTION of : ${MPIRUN_COMMAND} ${MPIRUN_OPTIONS} ./${config_Executable_Name} > ${Exe_Output} 2>&1" |
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| 452 | echo > ${Exe_Output} |
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| 453 | echo "#######################################" >> ${Exe_Output} |
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| 454 | echo "EXECUTION of : ${MPIRUN_COMMAND} ${MPIRUN_OPTIONS} ./${config_Executable_Name}" >> ${Exe_Output} |
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| 455 | echo >> ${Exe_Output} |
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| 456 | typeset RET |
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| 457 | RUN_DATE_BEGIN=$( date '+%Y-%m-%dT%H:%M:%S' ) |
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| 458 | ${MPIRUN_COMMAND} ${MPIRUN_OPTIONS} ./${config_Executable_Name} >> ${Exe_Output} 2>&1 |
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| 459 | RET=$? |
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| 460 | RUN_DATE_END=$( date '+%Y-%m-%dT%H:%M:%S' ) |
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| 461 | if [ ${RET} -gt 0 ] ; then |
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| 462 | echo "Return code of executable :" ${RET} |
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| 463 | IGCM_debug_Exit "EXECUTABLE" |
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| 464 | IGCM_sys_Cp ${Exe_Output} ${SUBMIT_DIR}/${PREFIX}_${Exe_Output}_error |
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| 465 | ExecutionFail=true |
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| 466 | fi |
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| 467 | echo >> ${Exe_Output} |
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| 468 | echo "#######################################" >> ${Exe_Output} |
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| 469 | echo "libIGCM RunDateBegin=${RUN_DATE_BEGIN}" >> ${Exe_Output} |
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| 470 | echo "libIGCM RunDateEnd=${RUN_DATE_END}" >> ${Exe_Output} |
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| 471 | echo >> ${Exe_Output} |
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| 472 | else |
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| 473 | echo "EXECUTION of : ${MPIRUN_COMMAND} ${MPIRUN_OPTIONS} ./${config_Executable_Name} simulated for DRYRUN = " $DRYRUN |
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| 474 | if ( $DEBUG_debug ) ; then |
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| 475 | echo "FOR EXECUTION DRYRUN mode = " $DRYRUN >> stack |
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| 476 | fi |
|---|
| 477 | fi |
|---|
| 478 | echo "========================================================================" |
|---|
| 479 | |
|---|
| 480 | echo |
|---|
| 481 | echo "#######################################" |
|---|
| 482 | echo "# DIR AFTER RUN EXECUTION #" |
|---|
| 483 | echo "#######################################" |
|---|
| 484 | echo |
|---|
| 485 | ls -lrt |
|---|
| 486 | |
|---|
| 487 | #D- |
|---|
| 488 | # ------------------------------------------------------------------ |
|---|
| 489 | #D- Desactivate running environnement variables |
|---|
| 490 | # ------------------------------------------------------------------ |
|---|
| 491 | IGCM_sys_desactiv_variables |
|---|
| 492 | |
|---|
| 493 | #D- |
|---|
| 494 | #D----------------------------------------------------------------== |
|---|
| 495 | #D- 4. Post execution operations |
|---|
| 496 | #D----------------------------------------------------------------== |
|---|
| 497 | |
|---|
| 498 | #D- |
|---|
| 499 | # ------------------------------------------------------------------ |
|---|
| 500 | #D- Save on archive machine netcdf outputs, restarts |
|---|
| 501 | #D- and text files of models |
|---|
| 502 | # ------------------------------------------------------------------ |
|---|
| 503 | IGCM_comp_Finalize |
|---|
| 504 | |
|---|
| 505 | #D- |
|---|
| 506 | # ------------------------------------------------------------------ |
|---|
| 507 | #D- Test if all was right after Finalize |
|---|
| 508 | # ------------------------------------------------------------------ |
|---|
| 509 | IGCM_debug_Verif_Exit |
|---|
| 510 | |
|---|
| 511 | #D- |
|---|
| 512 | # ------------------------------------------------------------------ |
|---|
| 513 | #D- Configure asynchronous post-treatment (Level 0) when necessary (rebuild) |
|---|
| 514 | #D- Configure classic post-treatment (Level 1) when necessary (TimeSeries/Seasonal) |
|---|
| 515 | # ------------------------------------------------------------------ |
|---|
| 516 | IGCM_post_Configure |
|---|
| 517 | |
|---|
| 518 | #D- |
|---|
| 519 | # ------------------------------------------------------------------ |
|---|
| 520 | #D- Launch remote rebuild or/and post-treatment process if necessary |
|---|
| 521 | # ------------------------------------------------------------------ |
|---|
| 522 | IGCM_post_Submit |
|---|
| 523 | |
|---|
| 524 | #D- |
|---|
| 525 | # ------------------------------------------------------------------ |
|---|
| 526 | #D- Save job output |
|---|
| 527 | #D- Manage executable size to save only different binary |
|---|
| 528 | #D- Write in run.card user, system and elapse time |
|---|
| 529 | #D- Check that everything went well ! No ? then we stop. |
|---|
| 530 | #D- Determine next computed period |
|---|
| 531 | # ------------------------------------------------------------------ |
|---|
| 532 | IGCM_config_PeriodEnd |
|---|
| 533 | |
|---|
| 534 | echo "Ending iteration ${Period}" |
|---|
| 535 | (( Period = Period + 1 )) |
|---|
| 536 | |
|---|
| 537 | # End loop if date end is reached |
|---|
| 538 | if [ ${SimulationLengthInDays} -ge ${ExperienceLengthInDays} ] ; then |
|---|
| 539 | break ; |
|---|
| 540 | fi |
|---|
| 541 | |
|---|
| 542 | PeriodContinue=false |
|---|
| 543 | if [ ${Period} -le ${PeriodNb} ]; then |
|---|
| 544 | PeriodContinue=true |
|---|
| 545 | fi |
|---|
| 546 | done |
|---|
| 547 | |
|---|
| 548 | #D- |
|---|
| 549 | #D--------------------------------------------------------------------== |
|---|
| 550 | #D- 5. Submit next job or send mail if simulation over. |
|---|
| 551 | #D--------------------------------------------------------------------== |
|---|
| 552 | IGCM_config_Finalize |
|---|
| 553 | |
|---|
| 554 | date |
|---|
