#!/bin/ksh #set -vx #************************************************************** # Author: Sebastien Denvil, Sonia Labetoulle, Nicolas Lebas, Sebastien Nguyen # Contact: Nicolas.Lebas__at__locean-ipsl.upmc.fr # $Revision:: $ Revision of last commit # $Author:: $ Author of last commit # $Date:: $ Date of last commit # IPSL (2012) # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC # # >>> Date ensemble <<< # Author: Nicolas Lebas (adapted from Sonia Labetoulle) # Contact: Nicolas.Lebas__at__locean-ipsl.upmc.fr # IPSL (2014) # # >>> Add 3D perturbation maps to oceanic restart <<< # Author: Sebastien Nguyen # Contact: Sebastien.Nguyen__at__locean-ipsl.upmc.fr # IPSL (2014) # # >>> Uniform DATE and PERTURB ensemble (remove old, useless), ADD some functions <<< # add : IGCM_ensemble_InitRunDir, IGCM_ensemble_FilesUpdate (unique function) # DATE ensemble : removed periodic case # : all dates are NON-periodic # CAST PERTURBED ensemble : removed NON-periodic case # : all casts are periodic (*Y or *M) # : removed Ens_PERTURB_PERTU_MAP_LIST case # # Author: Simona Flavoni & Nicola Lebas # Contact: Simona.Flavoni__at__locean-ipsl.upmc.fr # IPSL (2019) #************************************************************** # Read which ensemble type are active function IGCM_ensemble_Init { IGCM_debug_PushStack "IGCM_ensemble_Init" IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB active IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE active Job_Period=10 # PARAMETER USED in function IGCM_ensemble_FilesUpdate IGCM_debug_Print 1 "Ens_PERTURB ACTIVE = ${ensemble_Ens_PERTURB_active}" IGCM_debug_Print 1 "Ens_DATE ACTIVE = ${ensemble_Ens_DATE_active}" echo "" #==================================================== # Define ARCHIVE : Dedicated to large files # Define STORAGE : Dedicated to small/medium files # Define R_OUT : Output tree located on ARCHIVE # Define R_FIG : Output tree located on STORAGE hosting figures (monitoring and atlas, and/or small files) # Define R_BUF : USELESS and DEPRECATED output tree. IGCM_sys_defineArchives IGCM_debug_PopStack "IGCM_ensemble_Init" } ############### ENSEMBLE ################# function IGCM_ensemble_InitRunDir { if [ -d ${SUBMIT_DIR}/${JobName} ] ; then IGCM_debug_Print 3 "STOP directory ${SUBMIT_DIR}/${JobName} already exists." exit # SF: stop at this point because in ENSEMBLE case need to be stopped fi IGCM_sys_Mkdir ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/config.card ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/ensemble.card ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/Job_* ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/run.card.init ${RUN_DIR} if [ -f ${SUBMIT_DIR}/Qsub.* ]; then IGCM_sys_Cp ${SUBMIT_DIR}/Qsub.* ${RUN_DIR} fi if [ -f ${SUBMIT_DIR}/Qclean.* ]; then IGCM_sys_Cp ${SUBMIT_DIR}/Qclean.* ${RUN_DIR} fi } ############### Create Member Directory ENSEMBLE ################# function IGCM_ensemble_CreateMemberDir { # if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} ln -s ../../COMP ln -s ../../PARAM ln -s ../../POST ln -s ../../DRIVER IGCM_sys_Cd ${RUN_DIR} IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/${JobName} # Dump command to be lauched echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qsub.${StartDir}.sh echo "${SUBMIT} ${JobName} ; cd -" >> ${RUN_DIR}/Qsub.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.latestPackperiod.${StartDir}.sh echo "${libIGCM}/clean_latestPackperiod.job ; cd -" >> ${RUN_DIR}/Qclean.latestPackperiod.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.PeriodLength.${StartDir}.sh echo "${libIGCM}/clean_PeriodLength.job ; cd -" >> ${RUN_DIR}/Qclean.PeriodLength.${StartDir}.sh } ############### FilesUpdate ENSEMBLE ################# function IGCM_ensemble_FilesUpdate { IGCM_debug_PushStack "IGCM_ensemble_FilesUpdate" # Debug Print : echo IGCM_debug_Print 1 "IGCM_ensemble_FilesUpdate :" EnsembleType=${1} MemberNb=${2} HumanDateBegin=$( IGCM_date_ConvertFormatToHuman ${3} ) HumanDateEnd=$( IGCM_date_ConvertFormatToHuman ${4} ) HumanRestartDate=$( IGCM_date_ConvertFormatToHuman ${5} ) if [[ X${6} != "X" ]]; then initFrom=${6} # non periodic config (INITFROM could be different between members) else initFrom=$(eval echo $\ensemble_Ens_${EnsembleType}_INITFROM) # periodic (same INITFROM value) fi if [[ X${7} != "X" ]]; then initPath=${7} # non periodic config (INITPATH could be different between members) else initPath=$(eval echo $\ensemble_Ens_${EnsembleType}_INITPATH) # periodic (same INITPATH value) fi # ==> config.card # [ENSEMBLE] IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleRun 'y' IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleName $(eval echo $\ensemble_Ens_${EnsembleType}_NAME) IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleDate ${HumanDateBegin} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleType "Ens_${EnsembleType}" # [UserChoices] IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices JobName ${MemberDir} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices DateBegin ${HumanDateBegin} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices DateEnd ${HumanDateEnd} # Adhoc exceptioN for CMIP6 : update realisation number in member field. if ( [ X"$( echo ${config_UserChoices_ExpType} | grep CMIP6 )" != "X" ] ) ; then IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices Member "r${MemberNb}i1p1f1" fi # [Restarts] IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts OverRule "n" # [ATM/OCE/...] for comp in ${config_ListOfComponents[*]} ; do IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} Restart "y" IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} RestartDate ${HumanRestartDate} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} RestartJobName ${initFrom} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} RestartPath ${initPath} # Adhoc exception for CMIP6 : exclude XIOS from the restart overrule mechanism. if ( [ X${comp} = XIOS ] && [ X"$( echo ${config_UserChoices_ExpType} | grep CMIP6 )" != "X" ] ) ; then IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} Restart "n" fi done unset initFrom # ==> Job sed -e "s/\(#.*Script_Output_\)${config_UserChoices_JobName}\(\.*\)/\1${MemberDir}\2/" \ -e "s/\(#.*\)${config_UserChoices_JobName}\(\.*\)/\1${MemberDir} \2/" \ -e "s/^PeriodNb=.*/PeriodNb=${Job_Period}/" \ ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} > Job_${MemberDir}.tmp IGCM_sys_Mv Job_${MemberDir}.tmp ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} IGCM_debug_PopStack "IGCM_ensemble_FilesUpdate" } ############### Perturb ENSEMBLE ################# function IGCM_ensemble_CastInit { IGCM_debug_PushStack "IGCM_ensemble_CastInit" IGCM_ensemble_InitRunDir ## Init some variables (only periodic case) CastPeriodicStart=true echo " pwd id : ${PWD}" IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB active IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB NAME IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB BEGIN_INIT IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB END_INIT IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB PERIODICITY IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB LENGTH IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER_NAMESLIST IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER_INITFROM IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER_INITPATH IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB PERTURB_BIN IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB INITFROM IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB INITPATH IGCM_card_DefineVariableFromOption config.card UserChoices JobName IGCM_card_DefineVariableFromOption config.card UserChoices TagName IGCM_card_DefineVariableFromOption config.card UserChoices CalendarType IGCM_card_DefineArrayFromSection config.card ListOfComponents echo IGCM_debug_Print 1 "[Ens_PERTURB]" IGCM_debug_Print 1 "ACTIVE = ${ensemble_Ens_PERTURB_active}" IGCM_debug_Print 1 "NAME = ${ensemble_Ens_PERTURB_NAME}" IGCM_debug_Print 1 "BEGIN_INIT = ${ensemble_Ens_PERTURB_BEGIN_INIT}" IGCM_debug_Print 1 "END_INIT = ${ensemble_Ens_PERTURB_END_INIT}" IGCM_debug_Print 1 "PERIODICITY = ${ensemble_Ens_PERTURB_PERIODICITY}" IGCM_debug_Print 1 "LENGTH = ${ensemble_Ens_PERTURB_LENGTH}" IGCM_debug_Print 1 "MEMBER = ${ensemble_Ens_PERTURB_MEMBER}" IGCM_debug_Print 1 "MEMBER_NAMESLIST = ${ensemble_Ens_PERTURB_MEMBER_NAMESLIST[*]}" IGCM_debug_Print 1 "MEMBER_INITFROM = ${ensemble_Ens_PERTURB_MEMBER_INITFROM}" IGCM_debug_Print 1 "MEMBER_INITPATH = ${ensemble_Ens_PERTURB_MEMBER_INITPATH}" IGCM_debug_Print 1 "PERTURB_BIN = ${ensemble_Ens_PERTURB_PERTURB_BIN[*]}" IGCM_debug_Print 1 "INITFROM = ${ensemble_Ens_PERTURB_INITFROM}" IGCM_debug_Print 1 "INITPATH = ${ensemble_Ens_PERTURB_INITPATH}" IGCM_debug_Print 1 "JobName = ${config_UserChoices_JobName}" IGCM_debug_Print 1 "TagName = ${config_UserChoices_TagName}" IGCM_debug_Print 1 "CalendarType = ${config_UserChoices_CalendarType}" IGCM_debug_Print 1 "ListOfComponents = ${config_ListOfComponents[*]}" ### Check unset variables and set them to empty # Following var are set because they could be unset in some # use case (ex: non periodic if periodic is active...) if [[ "${ensemble_Ens_PERTURB_PERIODICITY}" = _0_ || "${ensemble_Ens_PERTURB_PERIODICITY}" = '' ]]; then ensemble_Ens_PERTURB_PERIODICITY=NONE fi if [[ "${ensemble_Ens_PERTURB_MEMBER}" = _0_ || "${ensemble_Ens_PERTURB_MEMBER}" = '' ]]; then ensemble_Ens_PERTURB_MEMBER=NONE fi if [[ "${ensemble_Ens_PERTURB_END_INIT}" = _0_ || "${ensemble_Ens_PERTURB_END_INIT}" = '' ]]; then ensemble_Ens_PERTURB_END_INIT=${ensemble_Ens_PERTURB_BEGIN_INIT} fi ### End check unset variables ### PerturbExe=${ensemble_Ens_PERTURB_PERTURB_BIN[0]} case ${PerturbExe} in AddNoise) PerturbComp=${ensemble_Ens_PERTURB_PERTURB_BIN[1]} PerturbFile=${ensemble_Ens_PERTURB_PERTURB_BIN[2]} PerturbVar=${ensemble_Ens_PERTURB_PERTURB_BIN[3]} PerturbAmp=${ensemble_Ens_PERTURB_PERTURB_BIN[4]} IGCM_debug_Print 1 "PerturbExe = ${PerturbExe}" IGCM_debug_Print 1 "PerturbFile = ${PerturbFile}" IGCM_debug_Print 1 "PerturbComp = ${PerturbComp}" IGCM_debug_Print 1 "PerturbVar = ${PerturbVar}" IGCM_debug_Print 1 "PerturbAmp = ${PerturbAmp}" ;; AddPertu3DOCE) PerturbComp=${ensemble_Ens_PERTURB_PERTURB_BIN[1]} PerturbFile=${ensemble_Ens_PERTURB_PERTURB_BIN[2]} PerturbVar=${ensemble_Ens_PERTURB_PERTURB_BIN[3]} PerturbMask=${ensemble_Ens_PERTURB_PERTURB_BIN[4]} IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MASKPATH IGCM_debug_Print 1 "PerturbExe = ${PerturbExe}" IGCM_debug_Print 1 "PerturbFile = ${PerturbFile}" IGCM_debug_Print 1 "PerturbComp = ${PerturbComp}" IGCM_debug_Print 1 "PerturbVar = ${PerturbVar}" IGCM_debug_Print 1 "PerturbMask = ${PerturbMask}" IGCM_debug_Print 1 "MASK PATH = ${ensemble_Ens_PERTURB_MASKPATH}" ;; esac # A few checks Period case: # ... Check PERIODICITY ... case ${ensemble_Ens_PERTURB_PERIODICITY} in NONE) IGCM_debug_Print 1 "periodic start not active" CastPeriodicStart=false ;; *[Yy]|*[Mm]) CastPeriodicStart=true IGCM_debug_Print 1 "Periodic length : ${ensemble_Ens_PERTURB_PERIODICITY}" ;; *) IGCM_debug_Exit "IGCM_ensemble_CastInit ${ensemble_Ens_PERTURB_PERIODICITY} : invalid PERIODICITY" IGCM_debug_Exit "Choose a value in *Y or *M" IGCM_debug_Verif_Exit ;; esac # ... Check LENGTH ... case ${ensemble_Ens_PERTURB_LENGTH} in *[Yy]|*[Mm]) IGCM_debug_Print 1 "Periodic duration : ${ensemble_Ens_PERTURB_LENGTH}" ;; *) IGCM_debug_Exit "IGCM_ensemble_CastInit ${ensemble_Ens_PERTURB_LENGTH} invalid LENGTH" IGCM_debug_Exit "Choose a value in choose in *Y or *M" IGCM_debug_Verif_Exit ;; esac # Need to know all the restart filename of the component we will apply the noise to IGCM_card_DefineArrayFromOption config.card ListOfComponents ${PerturbComp} eval compname=\${config_ListOfComponents_${PerturbComp}[0]} > /dev/null 2>&1 # Target the component's card we apply the noise to card=${SUBMIT_DIR}/COMP/${compname}.card # Read the restart file list. To be used later IGCM_card_DefineArrayFromOption ${card} RestartFiles List ListFilesName=${compname}_RestartFiles_List eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 # Check IGCM_debug_Print 1 "Nb Restart Files = ${NbFiles}" IGCM_debug_PopStack "IGCM_ensemble_CastInit" } function IGCM_ensemble_CastPeriodicStarts { IGCM_debug_PushStack "IGCM_ensemble_CastPeriodicStarts" [ ${CastPeriodicStart} = false ] && return echo IGCM_debug_Print 1 "Manage periodic starts" #.. Manage periodic starts .. # ====================== # ... Loop over DateBegin ... eval DateBegin=\${ensemble_Ens_PERTURB_BEGIN_INIT} while [ ${DateBegin} -le ${ensemble_Ens_PERTURB_END_INIT} ] ; do IGCM_date_GetYearMonth ${DateBegin} year month # - Determine number of day(s) in PERIODICITY PeriodLengthInDays=$( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_PERTURB_PERIODICITY} ) # - Determine number of day(s) in LENGTH DurationLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_PERTURB_LENGTH} ) - 1 )) # - Determine DateEnd (( DateEnd = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DurationLengthInDays} ) )) # - Build directory name #SF IGCM_ensemble_CastDirectoryName ${ensemble_Ens_PERTURB_NAME} ${ensemble_Ens_PERTURB_PERIODICITY} ${year} ${month} ${StartDir} IGCM_ensemble_CastDirectoryName ${ensemble_Ens_PERTURB_NAME} ${ensemble_Ens_PERTURB_PERIODICITY} ${year} ${month} # StartDir="${ensemble_Ens_PERTURB_NAME}" # - Determine RestartDate (( Offset = -1 )) (( RestartDate = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${Offset} ) )) IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt # - Create directory for current DateBegin if [ ! -d ${StartDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} ln -s ../../.resol . ln -s ../../.libmpi . IGCM_sys_Cd ${RUN_DIR} fi # - Create directory to store modified restart files RestartDir=${STORAGE}/IGCM_IN/${config_UserChoices_TagName}/${StartDir} IGCM_sys_MkdirArchive ${RestartDir} # - Loop over members i=1 while [ $i -le ${ensemble_Ens_PERTURB_MEMBER} ] ; do if [ $((i)) -le 9 ] ; then MemberDir="${StartDir}"-0"$((i))" else MemberDir="${StartDir}-$((i))" fi echo IGCM_debug_Print 3 "${MemberDir}" JobName="Job_${MemberDir}" # * Create directory if it doesn't exist and copy/link files if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then # * Create ${SUBMIT_DIR}/${StartDir}/${MemberDir} directories # link COMP PARAM POST and DRIVER # cp config.card, run.card.init, Job_ # and Dump command to be launched IGCM_ensemble_CreateMemberDir # * Update files : config.card, Job_, COMP/comp.card IGCM_ensemble_FilesUpdate "PERTURB" ${i} ${DateBegin} ${DateEnd} ${RestartDate} # * Apply noise on restart file IGCM_ensemble_CastPerturbFile fi (( i = i + 1 )) done # Done. Save ${StartDir} submission text file IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.PeriodLength.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.latestPackperiod.${StartDir}.sh ${SUBMIT_DIR} # - Next DateBegin echo "$DateBegin $PeriodLengthInDays" case ${ensemble_Ens_PERTURB_PERIODICITY} in *[Yy]|*[Mm]) (( DateBegin = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${PeriodLengthInDays} ) )) ;; esac echo "New DateBegin = $DateBegin" echo "========================================================================" done IGCM_debug_PopStack "IGCM_ensemble_CastPeriodicStarts" } function IGCM_ensemble_CastMemberList { IGCM_debug_PushStack "IGCM_ensemble_CastMemberList" if [ ${CastMemberList} = false ] ; then IGCM_debug_PopStack "IGCM_ensemble_CastMemberList" return fi echo IGCM_debug_Print 1 "Manage members list" #.. Manage members list .. # ====================== # DateBegin eval DateBegin=\${ensemble_Ens_PERTURB_BEGIN_INIT} IGCM_date_GetYearMonth ${DateBegin} ${year} ${month} # - Determine number of day(s) in LENGTH DurationLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_PERTURB_LENGTH} ) - 1 )) # - Determine DateEnd DateEnd=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DurationLengthInDays} ) # bad hack enforce yearly for parent directory name # - Build directory name IGCM_ensemble_CastDirectoryName ${ensemble_Ens_PERTURB_NAME} 1Y ${year} ${month} #SF IGCM_ensemble_CastDirectoryName ${ensemble_Ens_PERTURB_NAME} 1Y ${year} ${month} ${StartDir} # - Determine RestartDate (( Offset = -1 )) RestartDate=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${Offset} ) IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt # - Create directory for current DateBegin if [ ! -d ${StartDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} ln -s ../../.resol . ln -s ../../.libmpi . IGCM_sys_Cd ${RUN_DIR} fi # - Create directory to store modified restart files RestartDir=${STORAGE}/IGCM_IN/${config_UserChoices_TagName}/${StartDir} IGCM_sys_MkdirArchive ${RestartDir} # - Loop over members i=1 nbmember=${ensemble_Ens_PERTURB_MEMBER} while [ $i -lt $nbmember ] ; do MemberVec=${ensemble_PERTURB_MEMBER_[${i}]} MemberDir=${config_UserChoices_Member} echo IGCM_debug_Print 3 "print nbmember: ${nbmember}" IGCM_debug_Print 3 "print MemberVec: ${ensemble_PERTURB_MEMBER[${i}]}" JobName="Job_${MemberDir}" echo IGCM_debug_Print 3 "${MemberDir}" # * Create directory if it doesn't exist and copy/link files if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then # * Create ${SUBMIT_DIR}/${StartDir}/${MemberDir} directories # link COMP PARAM POST and DRIVER # cp config.card, run.card.init, Job_ # and Dump command to be launched IGCM_ensemble_CreateMemberDir # * Update files : config.card, Job_, COMP/comp.card IGCM_ensemble_FilesUpdate "PERTURB" ${i} ${DateBegin} ${DateEnd} ${RestartDate} ${InitFrom} ${InitPath} # * Apply noise on restart file IGCM_ensemble_CastPerturbFile fi (( i = i + 1 )) done # Done. Save ${StartDir} submission text file IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.PeriodLength.${StartDir}.sh ${SUBMIT_DIR} IGCM_debug_PopStack "IGCM_ensemble_CastMemberList" } function IGCM_ensemble_CastDirectoryName { IGCM_debug_PushStack "IGCM_ensemble_CastDirectoryName" #.. Debug Print .. echo IGCM_debug_Print 1 "IGCM_ensemble_CastDirectoryName :" echo Name=$1 PeriodLen=$2 Year=$3 Month=$4 # - Build directory name case ${PeriodLen} in *Y|*y) StartDir="${Name}${year}" ;; esac IGCM_debug_PopStack "IGCM_ensemble_CastDirectoryName" } function IGCM_ensemble_CastPerturbFile { IGCM_debug_PushStack "IGCM_ensemble_CastPerturbFile" typeset i i_ j typeset -Z4 j4 typeset file_out file_out_ #.. Debug Print .. echo IGCM_debug_Print 1 "IGCM_ensemble_CastPerturbFile :" #.. FileIn ? => RestartDate .. DirIn="${ensemble_Ens_PERTURB_INITPATH}/${ensemble_Ens_PERTURB_INITFROM}/${PerturbComp}/Restart" DirInTar="${ensemble_Ens_PERTURB_INITPATH}/${ensemble_Ens_PERTURB_INITFROM}/RESTART" FileIn="${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${PerturbFile}" DirOut="${RestartDir}/${MemberDir}/${PerturbComp}/Restart" # * Create member restart directory IGCM_sys_TestDirArchive ${DirOut} RET=$? if [ $RET -gt 0 ] ; then IGCM_sys_MkdirArchive ${DirOut} fi FileOut="${MemberDir}_${RestartDate}_${PerturbFile}" IGCM_debug_Print 1 "FileIn = ${DirIn}/${FileIn}" IGCM_debug_Print 1 "FileOut = ${DirOut}/${FileOut}.nc" IGCM_sys_TestFileArchive ${DirOut}/${FileOut}.nc RET=$? if [ $RET -gt 0 ] ; then # * Look for the restart file we apply the noise to # restart file list pertaining to the component we apply the noise to # but not being the precise restart file we will apply the noise to unset OtherFileInList # generic restart filename list (like flxat, sstoc, restart, ...) unset OtherGenericList if ( [ X${FileName0} != X${NULL_STR} ] && [ X${FileName0} != XNONE ] ) ; then (( i=0 )) until [ $i -ge ${NbFiles} ]; do (( i_ = i+1 )) eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 eval file_out=${file_out_} generic_restart_file_name_out=$( basename ${file_out} .nc ) if [ ! ${generic_restart_file_name_out} = ${PerturbFile} ] ; then set +A OtherFileInList ${OtherFileInList[*]} ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic_restart_file_name_out}\*.nc set +A OtherGenericList ${OtherGenericList[*]} ${generic_restart_file_name_out} fi (( i=i+3 )) done fi # How many restart files other than the one we will apply the noise to NbOtherFiles=${#OtherGenericList[*]} ########################## # TO BE A FUNCTION BEGIN # ########################## if [ $( IGCM_sys_TestFileBuffer ${DirIn}/${FileIn}*.nc ; echo $? ) = 0 ] ; then IGCM_debug_Print 3 "Buffered restart" Buffered=true Archived=false Tared=false nb_restart_file=$(IGCM_sys_CountFileBuffer ${DirIn}/${FileIn}_????.nc) elif [ $( IGCM_sys_TestFileArchive ${DirIn}/${FileIn}*.nc ; echo $? ) = 0 ] ; then IGCM_debug_Print 3 "Archived restart" Buffered=false Archived=true Tared=false nb_restart_file=$(IGCM_sys_CountFileArchive ${DirIn}/${FileIn}_????.nc) else IGCM_debug_Print 3 "Tared restart" Buffered=false Archived=false Tared=true # Look for the tar file we want if we did not found it already for PotentialTarFile in $( find ${ensemble_Ens_PERTURB_INITPATH}/${ensemble_Ens_PERTURB_INITFROM}/RESTART -name "${ensemble_Ens_PERTURB_INITFROM}_*restart*.tar" -print ) ; do IsMatching=$( echo ${PotentialTarFile##*/} | sed "s:_restart::" | sed "s:^${ensemble_Ens_PERTURB_INITFROM}_::" | sed "s:\.tar$::" | gawk -F_ -v restartdate=${RestartDate} '{if (($1 <= restartdate) && ($2 >= restartdate)) {print $1"_"$2}}' ) if [ ! X${IsMatching} = X ] ; then TarFileFound=${PotentialTarFile} break fi done # Extract relevant restart files IGCM_debug_Print 1 "tar xvf ${TarFileFound} ${PerturbComp}_${FileIn}*.nc ${OtherFileInList[*]}" tar xvf ${TarFileFound} ${PerturbComp}_${FileIn}*.nc ${OtherFileInList[*]} nb_restart_file=$( IGCM_sys_CountFileBuffer ${PerturbComp}_${FileIn}_????.nc ) fi # Move around and perturb restart files so as to be able to start hindcast/forecast simulation members if [ ${nb_restart_file} -gt 1 ] ; then j=0 until [ $j -ge ${nb_restart_file} ]; do j4=${j} if [ X${Buffered} = Xtrue ] ; then IGCM_sys_GetBuffer ${DirIn}/${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc cd ${DirOut} for generic in ${OtherGenericList[*]} ; do ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}_${j4}.nc done cd - elif [ X${Archived} = Xtrue ] ; then IGCM_sys_Get ${DirIn}/${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc for generic in ${OtherGenericList[*]} ; do IGCM_sys_RshArchive "cd ${DirOut} ; ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}_${j4}.nc" done elif [ X${Tared} = Xtrue ] ; then IGCM_debug_Print 2 "IGCM_sys_Mv ${PerturbComp}_${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc" IGCM_sys_Mv ${PerturbComp}_${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc for generic in ${OtherGenericList[*]} ; do IGCM_sys_Mv ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${DirOut}/${MemberDir}_${RestartDate}_${generic}_${j4}.nc done fi (( j=j+1 )) done else if [ X${Buffered} = Xtrue ] ; then IGCM_sys_GetBuffer ${DirIn}/${FileIn}.nc ${RUN_DIR}/${FileOut}.nc cd ${DirOut} for generic in ${OtherGenericList[*]} ; do ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}.nc done cd - elif [ X${Archived} = Xtrue ] ; then IGCM_sys_Get ${DirIn}/${FileIn}.nc ${RUN_DIR}/${FileOut}.nc for generic in ${OtherGenericList[*]} ; do IGCM_sys_RshArchive "cd ${DirOut} ; ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}.nc" done elif [ X${Tared} = Xtrue ] ; then IGCM_debug_Print 2 "IGCM_sys_Mv ${PerturbComp}_${FileIn}.nc ${RUN_DIR}/${FileOut}.nc" IGCM_sys_Mv ${PerturbComp}_${FileIn}.nc ${RUN_DIR}/${FileOut}.nc for generic in ${OtherGenericList[*]} ; do IGCM_debug_Print 2 "IGCM_sys_Mv ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${DirOut}/${MemberDir}_${RestartDate}_${generic}.nc" IGCM_sys_Mv ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${DirOut}/${MemberDir}_${RestartDate}_${generic}.nc done fi fi ######################## # TO BE A FUNCTION END # ######################## # treat the perturbation on different components by looking at the executable name case ${PerturbExe} in (AddNoise) IGCM_sys_Chmod 644 ${RUN_DIR}/${FileOut}.nc IGCM_debug_Print 1 "${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PerturbAmp}" echo ${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PerturbAmp} > /dev/null 2>&1 if [ $? -ne 0 ] ; then IGCM_debug_Exit "Error with $( basename ${PerturbExe} )" IGCM_debug_Verif_Exit fi IGCM_sys_Put_Out ${RUN_DIR}/${FileOut}.nc ${DirOut}/ 644 ;; (AddPertu3DOCE) # where to find the pattern we apply to the restart PatternFile=${ensemble_Ens_PERTURB_MEMBER_INITPATH}/${ensemble_Ens_PERTURB_MEMBER_INITFROM}/${MemberVec}.nc # where to find the land mask for the grid MaskFile=${ensemble_Ens_PERTURB_MASKPATH}/${PerturbMask} # if there is multiple restart files rebuild restart file if [ ${nb_restart_file} -gt 1 ] ; then IGCM_debug_Print 1 "rebuild files ${FileOut}_????.nc" IGCM_sys_rebuild ${RUN_DIR}/${FileOut}.nc ${RUN_DIR}/${FileOut}_????.nc fi # there is now a single restart file IGCM_sys_Chmod 644 ${RUN_DIR}/${FileOut}.nc IGCM_debug_Print 1 "${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PatternFile} ${MaskFile}" echo # add pattern to restart file on variable PerturbVar ${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PatternFile} ${MaskFile} > /dev/null 2>&1 if [ $? -ne 0 ] ; then IGCM_debug_Exit "Error with $( basename ${PerturbExe} )" IGCM_debug_Verif_Exit fi IGCM_sys_Put_Out ${RUN_DIR}/${FileOut}.nc ${DirOut}/ 644 ;; esac fi #.. Update config.card.. IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} Restart "y" IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} RestartDate ${HumanRestartDate} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} RestartJobName ${MemberDir} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} RestartPath ${RestartDir}/ IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleType "Ens_PERTURB" IGCM_debug_PopStack "IGCM_ensemble_CastPerturbFile" } ############### Date ENSEMBLE ################# function IGCM_ensemble_DateInit { IGCM_debug_PushStack "IGCM_ensemble_DateInit" IGCM_ensemble_InitRunDir IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE active IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE NAME IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE BEGIN_INIT IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE BEGIN_RESTART IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE END_INIT IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE STARTDATE IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_DATE NONPERIODIC IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_DATE RESTART_NONPERIODIC IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE LENGTH IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_DATE LENGTH_NONPERIODIC IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITFROM IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITFROM_NONPERIODIC IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITPATH IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITPATH_NONPERIODIC IGCM_card_DefineVariableFromOption config.card UserChoices JobName IGCM_card_DefineVariableFromOption config.card UserChoices TagName IGCM_card_DefineVariableFromOption config.card UserChoices CalendarType IGCM_card_DefineArrayFromSection config.card ListOfComponents echo IGCM_debug_Print 1 "[Ens_DATE]" IGCM_debug_Print 1 "ACTIVE = ${ensemble_Ens_DATE_active}" IGCM_debug_Print 1 "NAME = ${ensemble_Ens_DATE_NAME}" IGCM_debug_Print 1 "BEGIN_INIT = ${ensemble_Ens_DATE_BEGIN_INIT}" IGCM_debug_Print 1 "END_INIT = ${ensemble_Ens_DATE_END_INIT}" IGCM_debug_Print 1 "BEGIN_RESTART = ${ensemble_Ens_DATE_BEGIN_RESTART}" IGCM_debug_Print 1 "STARTDATE = ${ensemble_Ens_DATE_STARTDATE}" IGCM_debug_Print 1 "NONPERIODIC = ${ensemble_Ens_DATE_NONPERIODIC[*]}" IGCM_debug_Print 1 "RESTART_NONPERIODIC = ${ensemble_Ens_DATE_RESTART_NONPERIODIC[*]}" IGCM_debug_Print 1 "LENGTH = ${ensemble_Ens_DATE_LENGTH}" IGCM_debug_Print 1 "LENGTH_NONPERIODIC = ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[*]}" IGCM_debug_Print 1 "INITFROM = ${ensemble_Ens_DATE_INITFROM}" IGCM_debug_Print 1 "INITFROM_NONPERIODIC = ${ensemble_Ens_DATE_INITFROM_NONPERIODIC[*]}" IGCM_debug_Print 1 "INITPATH = ${ensemble_Ens_DATE_INITPATH}" IGCM_debug_Print 1 "INITPATH_NONPERIODIC = ${ensemble_Ens_DATE_INITPATH_NONPERIODIC[*]}" IGCM_debug_Print 1 "JobName = ${config_UserChoices_JobName}" IGCM_debug_Print 1 "TagName = ${config_UserChoices_TagName}" IGCM_debug_Print 1 "CalendarType = ${config_UserChoices_CalendarType}" IGCM_debug_Print 1 "ListOfComponents = ${config_ListOfComponents[*]}" echo "" IGCM_debug_Print 1 "Check args..." DateNonPeriodicStart=true # ... Check LENGTH ... case ${ensemble_Ens_DATE_LENGTH} in *[Yy]|*[Mm]) IGCM_debug_Print 1 "Default simulation duration : ${ensemble_Ens_DATE_LENGTH}" ;; *) IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_LENGTH} invalid LENGTH" IGCM_debug_Exit "Choose a value in choose in *Y or *M" IGCM_debug_Verif_Exit ;; esac # *************************************** # A few checks for the Non-Periodic case: # *************************************** # if [[ ${#ensemble_Ens_DATE_NONPERIODIC[*]} != ${#ensemble_Ens_DATE_RESTART_NONPERIODIC[*]} ]] ; then # IGCM_debug_Exit "IGCM_ensemble_DateInit: NONPERIODIC and RESTART_NONPERIODIC lists have different sizes" # IGCM_debug_Verif_Exit # fi if [[ ${#ensemble_Ens_DATE_RESTART_NONPERIODIC[*]} > 0 ]] && [[ ${ensemble_Ens_DATE_RESTART_NONPERIODIC[*]} != _0_ ]]; then DateNonPeriodicStart=true # Use LENGTH if no NONPERIODIC_LENGTH given if [[ ${#ensemble_Ens_DATE_LENGTH_NONPERIODIC[*]} < ${#ensemble_Ens_DATE_NONPERIODIC[*]} ]] || [[ X"${ensemble_Ens_DATE_LENGTH_NONPERIODIC[0]}" = "XOption" ]] ; then IGCM_debug_Print 1 "WARNING: LENGTH_NONPERIODIC is not fill (or not correctly). " IGCM_debug_Print 1 "Use LENGTH value '${ensemble_Ens_DATE_LENGTH}' for all NONPERIODIC runs" DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]=${ensemble_Ens_DATE_LENGTH} (( DateNum = DateNum + 1 )) done fi # Use STARTDATE if no NONPERIODIC start date given if [[ ${#ensemble_Ens_DATE_NONPERIODIC[*]} < ${#ensemble_Ens_DATE_RESTART_NONPERIODIC[*]} ]] || [[ X"${ensemble_Ens_DATE_NONPERIODIC[0]}" = "XOption" ]] ; then IGCM_debug_Print 1 "WARNING: NONPERIODIC start date not fill (or not correctly)." IGCM_debug_Print 1 "Use STARTDATE value '${ensemble_Ens_DATE_STARTDATE}' for all NONPERIODIC runs" DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_DATE_RESTART_NONPERIODIC[*]} ] ; do ensemble_Ens_DATE_NONPERIODIC[${DateNum}]=${ensemble_Ens_DATE_STARTDATE} (( DateNum = DateNum + 1 )) done fi # Use INITFROM if no INITFROM_NONPERIODIC given if [ ${#ensemble_Ens_DATE_INITFROM_NONPERIODIC[*]} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; then IGCM_debug_Print 1 "WARNING: INITFROM_NONPERIODIC is not fill (or not correctly). Use INITFROM value '${ensemble_Ens_DATE_INITFROM}' for all NONPERIODIC runs" DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do ensemble_Ens_DATE_INITFROM_NONPERIODIC[${DateNum}]=${ensemble_Ens_DATE_INITFROM} (( DateNum = DateNum + 1 )) done fi # Use INITPATH if no INITPATH_NONPERIODIC given if [ ${#ensemble_Ens_DATE_INITPATH_NONPERIODIC[*]} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; then IGCM_debug_Print 1 "WARNING: INITPATH_NONPERIODIC is not fill (or not correctly). Use INITPATH value '${ensemble_Ens_DATE_INITPATH}' for all NONPERIODIC runs" DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do ensemble_Ens_DATE_INITPATH_NONPERIODIC[${DateNum}]=${ensemble_Ens_DATE_INITPATH} (( DateNum = DateNum + 1 )) done fi else IGCM_debug_Print 1 "Non-Periodic start NOT ACTIVE" DateNonPeriodicStart=false fi if [[ ${DateNonPeriodicStart} = true ]]; then DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do # - Check LENGTH_NONPERIODIC case ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]} in *[Yy]|*[Mm]) IGCM_debug_Print 1 "Non-periodic duration ${DateNum}: ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]}" ;; *) IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]} : invalid NON PERIODIC LENGTH" IGCM_debug_Exit "choose in *Y or *M" IGCM_debug_Verif_Exit ;; esac # - Check RESTART_NONPERIODIC case ${ensemble_Ens_DATE_RESTART_NONPERIODIC[${DateNum}]} in _0_) IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_RESTART_NONPERIODIC[${DateNum}]} : invalid NON PERIODIC RESTART" IGCM_debug_Verif_Exit ;; esac (( DateNum = DateNum + 1 )) done fi # DateNonPeriodicStart = true IGCM_debug_PopStack "IGCM_ensemble_DateInit" } function IGCM_ensemble_DateNonPeriodicStarts { IGCM_debug_PushStack "IGCM_ensemble_DateNonPeriodicStarts" #.. Manage non periodic starts => Loop over DateBegin .. # ========================== [ ${DateNonPeriodicStart} = false ] && return echo IGCM_debug_Print 1 ">>> MANAGE NON PERIODIC STARTS <<<" # - Build directory name echo "" echo "========================================================================" echo "ensemble_Ens_DATE_NAME = ${ensemble_Ens_DATE_NAME}" StartDir="${ensemble_Ens_DATE_NAME}" # - Does $StartDir already exist ? if [ ! -d ${SUBMIT_DIR}/${StartDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} ln -s ../../.resol . ln -s ../../.libmpi . IGCM_sys_Cd ${RUN_DIR} fi DateNum=0 # ... Loop over ensemble_Ens_DATE_NONPERIODIC ... while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do DateBegin=${ensemble_Ens_DATE_NONPERIODIC[${DateNum}]} Duree=${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]} RestartDate=${ensemble_Ens_DATE_RESTART_NONPERIODIC[${DateNum}]} InitFrom=${ensemble_Ens_DATE_INITFROM_NONPERIODIC[${DateNum}]} InitPath=${ensemble_Ens_DATE_INITPATH_NONPERIODIC[${DateNum}]} (( ii=DateNum + 1 )) MemberDir="${ensemble_Ens_DATE_NAME}${ii}" IGCM_debug_Print 3 "${MemberDir}" echo "Create: ${MemberDir}" # - Determine number of day(s) in LENGTH_NONPERIODIC IGCM_date_GetYearMonth ${DateBegin} year month DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${Duree} ) - 1 )) # - Determine DateEnd (( DateEnd = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) )) IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt PeriodDateEnd=$( grep -m1 ${StartDir} ${RUN_DIR}/CreatedDir.txt | cut -f2 -d\ ) JobName="Job_${MemberDir}" # * Create directory if it doesn't exist and copy files if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then # * Create ${SUBMIT_DIR}/${StartDir}/${MemberDir} directories # link COMP PARAM POST and DRIVER # cp config.card, run.card.init, Job_ # and Dump command to be launched IGCM_ensemble_CreateMemberDir # * Update files : config.card, Job_, COMP/comp.card IGCM_ensemble_FilesUpdate "DATE" ${ii} ${DateBegin} ${DateEnd} ${RestartDate} ${InitFrom} ${InitPath} fi # Done. Save ${StartDir} submission text file IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.PeriodLength.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.latestPackperiod.${StartDir}.sh ${SUBMIT_DIR} (( DateNum = DateNum + 1 )) done IGCM_debug_PopStack "IGCM_ensemble_DateNonPeriodicStarts" }