1 | #!/bin/ksh |
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2 | |
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3 | #************************************************************** |
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4 | # Author: Sebastien Denvil, Sonia Labetoulle, Nicolas Lebas, Sebastien Nguyen |
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5 | # Contact: Nicolas.Lebas__at__locean-ipsl.upmc.fr |
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6 | # $Revision:: $ Revision of last commit |
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7 | # $Author:: $ Author of last commit |
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8 | # $Date:: $ Date of last commit |
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9 | # IPSL (2012) |
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10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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11 | # |
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12 | # >>> Date ensemble <<< |
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13 | # Author: Nicolas Lebas (adapted from Sonia Labetoulle) |
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14 | # Contact: Nicolas.Lebas__at__locean-ipsl.upmc.fr |
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15 | # IPSL (2014) |
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16 | # |
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17 | # >>> Add 3D perturbation maps to oceanic restart <<< |
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18 | # Author: Sebastien Nguyen |
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19 | # Contact: Sebastien.Nguyen__at__locean-ipsl.upmc.fr |
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20 | # IPSL (2014) |
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21 | # |
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22 | #************************************************************** |
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23 | |
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24 | # Read which ensemble type are active |
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25 | function IGCM_ensemble_Init |
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26 | { |
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27 | IGCM_debug_PushStack "IGCM_ensemble_Init" |
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28 | |
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29 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB active |
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30 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE active |
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31 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PARAMETRIC active |
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32 | |
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33 | IGCM_debug_Print 1 "Ens_PERTURB ACTIVE = ${ensemble_Ens_PERTURB_active}" |
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34 | IGCM_debug_Print 1 "Ens_DATE ACTIVE = ${ensemble_Ens_DATE_active}" |
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35 | IGCM_debug_Print 1 "Ens_PARAMETRIC ACTIVE = ${ensemble_Ens_PARAMETRIC_active}" |
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36 | echo "" |
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37 | |
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38 | #==================================================== |
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39 | # Define ARCHIVE : Dedicated to large files |
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40 | # Define STORAGE : Dedicated to small/medium files |
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41 | # Define R_OUT : Output tree located on ARCHIVE |
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42 | # Define R_FIG : Output tree located on STORAGE hosting figures (monitoring and atlas, and/or small files) |
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43 | # Define R_BUF : USELESS and DEPRECATED output tree. |
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44 | IGCM_sys_defineArchives |
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45 | |
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46 | IGCM_debug_PopStack "IGCM_ensemble_Init" |
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47 | } |
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48 | |
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49 | # Set Alphanumerical variables ajust to member nb |
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50 | function IGCM_ensemble_SetAlpha |
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51 | { |
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52 | IGCM_debug_PushStack "IGCM_ensemble_SetAlpha" |
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53 | |
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54 | set -A Alpha A B C D E F G H I J K L M N O P Q R S T U V W X Y Z |
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55 | set -A AlphaMonth a b c d e f g h i j k l |
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56 | |
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57 | IGCM_debug_PopStack "IGCM_ensemble_SetAlpha" |
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58 | } |
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59 | |
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60 | ############### Perturb ENSEMBLE ################# |
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61 | function IGCM_ensemble_CastInit |
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62 | { |
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63 | IGCM_debug_PushStack "IGCM_ensemble_CastInit" |
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64 | |
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65 | IGCM_sys_Mkdir ${RUN_DIR} |
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66 | |
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67 | IGCM_sys_Cp ${SUBMIT_DIR}/config.card ${RUN_DIR} |
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68 | IGCM_sys_Cp ${SUBMIT_DIR}/ensemble.card ${RUN_DIR} |
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69 | IGCM_sys_Cp ${SUBMIT_DIR}/Job_* ${RUN_DIR} |
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70 | IGCM_sys_Cp ${SUBMIT_DIR}/run.card.init ${RUN_DIR} |
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71 | if [ -f ${SUBMIT_DIR}/Qsub.* ]; then |
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72 | IGCM_sys_Cp ${SUBMIT_DIR}/Qsub.* ${RUN_DIR} |
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73 | fi |
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74 | if [ -f ${SUBMIT_DIR}/Qclean.* ]; then |
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75 | IGCM_sys_Cp ${SUBMIT_DIR}/Qclean.* ${RUN_DIR} |
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76 | fi |
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77 | |
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78 | # Useful? |
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79 | #if [ -f ${SUBMIT_DIR}/CreatedDir.txt ] ; then |
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80 | # IGCM_sys_Cp ${SUBMIT_DIR}/CreatedDir.txt ${RUN_DIR} |
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81 | #fi |
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82 | # Useful? |
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83 | #if [ -f ${SUBMIT_DIR}/Qsub.sh ] ; then |
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84 | # IGCM_sys_Cp ${SUBMIT_DIR}/Qsub.sh ${RUN_DIR} |
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85 | #fi |
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86 | echo ${PWD} |
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87 | |
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88 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB active |
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89 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB NAME |
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90 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB BEGIN_INIT |
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91 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB END_INIT |
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92 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB PERIODICITY |
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93 | IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB NONPERIODIC |
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94 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB LENGTH |
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95 | IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB LENGTH_NONPERIODIC |
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96 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER |
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97 | IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER_LIST |
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98 | IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER_NAMESLIST |
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99 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER_INITFROM |
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100 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER_INITPATH |
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101 | IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB PERTURB_BIN |
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102 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB INITFROM |
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103 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB INITPATH |
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104 | IGCM_card_DefineVariableFromOption config.card UserChoices JobName |
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105 | IGCM_card_DefineVariableFromOption config.card UserChoices TagName |
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106 | IGCM_card_DefineVariableFromOption config.card UserChoices CalendarType |
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107 | IGCM_card_DefineArrayFromSection config.card ListOfComponents |
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108 | |
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109 | echo |
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110 | IGCM_debug_Print 1 "[Ens_PERTURB]" |
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111 | IGCM_debug_Print 1 "ACTIVE = ${ensemble_Ens_PERTURB_active}" |
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112 | IGCM_debug_Print 1 "NAME = ${ensemble_Ens_PERTURB_NAME}" |
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113 | IGCM_debug_Print 1 "BEGIN_INIT = ${ensemble_Ens_PERTURB_BEGIN_INIT}" |
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114 | IGCM_debug_Print 1 "END_INIT = ${ensemble_Ens_PERTURB_END_INIT}" |
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115 | IGCM_debug_Print 1 "PERIODICITY = ${ensemble_Ens_PERTURB_PERIODICITY}" |
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116 | IGCM_debug_Print 1 "NONPERIODIC = ${ensemble_Ens_PERTURB_NONPERIODIC[*]}" |
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117 | IGCM_debug_Print 1 "LENGTH = ${ensemble_Ens_PERTURB_LENGTH}" |
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118 | IGCM_debug_Print 1 "LENGTH_NONPERIODIC = ${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[*]}" |
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119 | IGCM_debug_Print 1 "MEMBER = ${ensemble_Ens_PERTURB_MEMBER}" |
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120 | IGCM_debug_Print 1 "MEMBER_LIST = ${ensemble_Ens_PERTURB_MEMBER_LIST[*]}" |
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121 | IGCM_debug_Print 1 "MEMBER_NAMESLIST = ${ensemble_Ens_PERTURB_MEMBER_NAMESLIST[*]}" |
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122 | IGCM_debug_Print 1 "MEMBER_INITFROM = ${ensemble_Ens_PERTURB_MEMBER_INITFROM}" |
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123 | IGCM_debug_Print 1 "MEMBER_INITPATH = ${ensemble_Ens_PERTURB_MEMBER_INITPATH}" |
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124 | IGCM_debug_Print 1 "PERTURB_BIN = ${ensemble_Ens_PERTURB_PERTURB_BIN[*]}" |
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125 | IGCM_debug_Print 1 "INITFROM = ${ensemble_Ens_PERTURB_INITFROM}" |
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126 | IGCM_debug_Print 1 "INITPATH = ${ensemble_Ens_PERTURB_INITPATH}" |
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127 | IGCM_debug_Print 1 "JobName = ${config_UserChoices_JobName}" |
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128 | IGCM_debug_Print 1 "TagName = ${config_UserChoices_TagName}" |
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129 | IGCM_debug_Print 1 "CalendarType = ${config_UserChoices_CalendarType}" |
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130 | IGCM_debug_Print 1 "ListOfComponents = ${config_ListOfComponents[*]}" |
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131 | |
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132 | PerturbExe=${ensemble_Ens_PERTURB_PERTURB_BIN[0]} |
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133 | |
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134 | case ${PerturbExe} in |
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135 | AddNoise) |
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136 | PerturbComp=${ensemble_Ens_PERTURB_PERTURB_BIN[1]} |
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137 | PerturbFile=${ensemble_Ens_PERTURB_PERTURB_BIN[2]} |
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138 | PerturbVar=${ensemble_Ens_PERTURB_PERTURB_BIN[3]} |
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139 | PerturbAmp=${ensemble_Ens_PERTURB_PERTURB_BIN[4]} |
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140 | |
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141 | IGCM_debug_Print 1 "PerturbExe = ${PerturbExe}" |
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142 | IGCM_debug_Print 1 "PerturbFile = ${PerturbFile}" |
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143 | IGCM_debug_Print 1 "PerturbComp = ${PerturbComp}" |
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144 | IGCM_debug_Print 1 "PerturbVar = ${PerturbVar}" |
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145 | IGCM_debug_Print 1 "PerturbAmp = ${PerturbAmp}" |
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146 | ;; |
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147 | AddPertu3DOCE) |
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148 | PerturbComp=${ensemble_Ens_PERTURB_PERTURB_BIN[1]} |
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149 | PerturbFile=${ensemble_Ens_PERTURB_PERTURB_BIN[2]} |
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150 | PerturbVar=${ensemble_Ens_PERTURB_PERTURB_BIN[3]} |
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151 | PerturbMask=${ensemble_Ens_PERTURB_PERTURB_BIN[4]} |
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152 | |
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153 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MASKPATH |
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154 | |
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155 | IGCM_debug_Print 1 "PerturbExe = ${PerturbExe}" |
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156 | IGCM_debug_Print 1 "PerturbFile = ${PerturbFile}" |
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157 | IGCM_debug_Print 1 "PerturbComp = ${PerturbComp}" |
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158 | IGCM_debug_Print 1 "PerturbVar = ${PerturbVar}" |
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159 | IGCM_debug_Print 1 "PerturbMask = ${PerturbMask}" |
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160 | IGCM_debug_Print 1 "MASK PATH = ${ensemble_Ens_PERTURB_MASKPATH}" |
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161 | ;; |
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162 | esac |
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163 | |
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164 | IGCM_ensemble_SetAlpha ${ensemble_Ens_PERTURB_MEMBER} |
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165 | |
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166 | # A few checks Period case: |
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167 | |
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168 | # ... Check PERIODICITY ... |
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169 | case ${ensemble_Ens_PERTURB_PERIODICITY} in |
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170 | NONE) |
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171 | IGCM_debug_Print 1 "periodic start not active" |
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172 | CastPeriodicStart=false |
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173 | ;; |
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174 | *[Yy]|*[Mm]) |
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175 | CastPeriodicStart=true |
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176 | IGCM_debug_Print 1 "Periodic length : ${ensemble_Ens_PERTURB_PERIODICITY}" ;; |
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177 | *) |
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178 | IGCM_debug_Exit "IGCM_ensemble_CastInit ${ensemble_Ens_PERTURB_PERIODICITY} : invalid PERIODICITY" |
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179 | IGCM_debug_Exit "Choose a value in *Y or *M" |
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180 | IGCM_debug_Verif_Exit ;; |
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181 | esac |
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182 | # ... Check LENGTH ... |
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183 | case ${ensemble_Ens_PERTURB_LENGTH} in |
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184 | *[Yy]|*[Mm]) |
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185 | IGCM_debug_Print 1 "Periodic duration : ${ensemble_Ens_PERTURB_LENGTH}" ;; |
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186 | *) |
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187 | IGCM_debug_Exit "IGCM_ensemble_CastInit ${ensemble_Ens_PERTURB_LENGTH} invalid LENGTH" |
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188 | IGCM_debug_Exit "Choose a value in choose in *Y or *M" |
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189 | IGCM_debug_Verif_Exit ;; |
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190 | esac |
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191 | |
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192 | # A few checks for the Non-Periodic case: |
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193 | DateNum=0 |
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194 | while [ ${DateNum} -lt ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} ] ; do |
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195 | |
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196 | # - Check LENGTH_NONPERIODIC |
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197 | case ${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[${DateNum}]} in |
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198 | _0_) |
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199 | IGCM_debug_Print 1 "non-periodic start not active" |
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200 | CastNonPeriodicStart=false |
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201 | ;; |
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202 | *[Yy]|*[Mm]) |
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203 | IGCM_debug_Print 1 "Non-periodic duration : ${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[${DateNum}]}" |
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204 | CastNonPeriodicStart=true |
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205 | ;; |
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206 | *) |
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207 | IGCM_debug_Exit "IGCM_ensemble_CastInit ${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[${DateNum}]} : invalid LENGTH" |
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208 | IGCM_debug_Exit "choose in *Y or *M" |
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209 | IGCM_debug_Verif_Exit ;; |
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210 | esac |
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211 | (( DateNum = DateNum + 1 )) |
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212 | done |
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213 | |
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214 | # A few checks for the MEMBER_LIST case: |
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215 | case ${ensemble_Ens_PERTURB_MEMBER_LIST[0]} in |
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216 | _0_) |
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217 | IGCM_debug_Print 1 "list of perturbation maps not active" |
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218 | CastMemberList=false |
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219 | ;; |
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220 | *) |
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221 | if [ ${CastPeriodicStart} = "true" ] ; then |
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222 | IGCM_debug_Exit "list of perturbation maps for periodic start not implemented, will stop execution" |
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223 | IGCM_debug_Verif_Exit |
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224 | elif [ ${CastNonPeriodicStart} = "true" ] ; then |
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225 | IGCM_debug_Exit "list of perturbation maps for non periodic start not implemented, will stop execution" |
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226 | IGCM_debug_Verif_Exit |
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227 | fi |
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228 | |
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229 | # test that MEMBER_NAMESLIST and MEMBER_LIST have the same size |
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230 | |
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231 | if [ ${#ensemble_Ens_PERTURB_MEMBER_LIST[*]} -ne ${#ensemble_Ens_PERTURB_MEMBER_NAMESLIST[*]} ] ; then |
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232 | IGCM_debug_Exit "number of elements in MEMBER_LIST and MEMBER_NAMESLIST differ" |
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233 | IGCM_debug_Verif_Exit |
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234 | fi |
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235 | |
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236 | IGCM_debug_Print 1 "list of perturbation maps : ${ensemble_Ens_PERTURB_MEMBER_LIST[*]}" |
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237 | IGCM_debug_Print 1 "list of members names : ${ensemble_Ens_PERTURB_MEMBER_NAMESLIST[*]}" |
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238 | CastMemberList=true |
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239 | ;; |
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240 | esac |
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241 | |
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242 | # IGCM_debug_Exit "fin du test MEMBER_LIST" |
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243 | # IGCM_debug_Verif_Exit |
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244 | |
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245 | # Need to know all the restart filename of the component we will apply the noise to |
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246 | IGCM_card_DefineArrayFromOption config.card ListOfComponents ${PerturbComp} |
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247 | eval compname=\${config_ListOfComponents_${PerturbComp}[0]} > /dev/null 2>&1 |
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248 | |
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249 | # Target the component's card we apply the noise to |
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250 | card=${SUBMIT_DIR}/COMP/${compname}.card |
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251 | |
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252 | # Read the restart file list. To be used later |
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253 | IGCM_card_DefineArrayFromOption ${card} RestartFiles List |
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254 | ListFilesName=${compname}_RestartFiles_List |
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255 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
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256 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
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257 | |
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258 | # Check |
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259 | IGCM_debug_Print 1 "Nb Restart Files = ${NbFiles}" |
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260 | |
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261 | IGCM_debug_PopStack "IGCM_ensemble_CastInit" |
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262 | } |
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263 | |
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264 | function IGCM_ensemble_CastPeriodicStarts |
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265 | { |
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266 | IGCM_debug_PushStack "IGCM_ensemble_CastPeriodicStarts" |
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267 | |
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268 | [ ${CastPeriodicStart} = false ] && return |
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269 | |
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270 | echo |
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271 | IGCM_debug_Print 1 "Manage periodic starts" |
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272 | |
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273 | #.. Manage periodic starts .. |
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274 | # ====================== |
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275 | |
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276 | # ... Loop over DateBegin ... |
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277 | eval DateBegin=\${ensemble_Ens_PERTURB_BEGIN_INIT} |
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278 | |
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279 | while [ ${DateBegin} -le ${ensemble_Ens_PERTURB_END_INIT} ] ; do |
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280 | IGCM_date_GetYearMonth ${DateBegin} year month |
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281 | |
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282 | # - Determine number of day(s) in PERIODICITY |
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283 | PeriodLengthInDays=$( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_PERTURB_PERIODICITY} ) |
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284 | |
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285 | # - Determine number of day(s) in LENGTH |
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286 | DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_PERTURB_LENGTH} ) - 1 )) |
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287 | |
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288 | # - Determine DateEnd |
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289 | (( DateEnd = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) )) |
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290 | |
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291 | # - Build directory name |
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292 | IGCM_ensemble_CastDirectoryName ${ensemble_Ens_PERTURB_NAME} ${ensemble_Ens_PERTURB_PERIODICITY} $year $month $StartDir |
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293 | |
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294 | # - Determine RestartDate |
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295 | (( Offset = -1 )) |
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296 | (( RestartDate = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${Offset} ) )) |
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297 | |
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298 | IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" |
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299 | echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt |
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300 | |
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301 | # - Create directory for current DateBegin |
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302 | if [ ! -d ${StartDir} ] ; then |
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303 | IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} |
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304 | IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} |
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305 | ln -s ../../.resol . |
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306 | ln -s ../../.libmpi . |
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307 | IGCM_sys_Cd ${RUN_DIR} |
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308 | fi |
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309 | |
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310 | # - Create directory to store modified restart files |
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311 | RestartDir=${STORAGE}/IGCM_IN/${config_UserChoices_TagName}/${StartDir} |
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312 | IGCM_sys_MkdirArchive ${RestartDir} |
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313 | |
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314 | # - Loop over members |
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315 | i=0 |
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316 | while [ $i -lt ${ensemble_Ens_PERTURB_MEMBER} ] ; do |
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317 | MemberDir="${StartDir}${Alpha[$i]}" |
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318 | echo |
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319 | IGCM_debug_Print 3 "${MemberDir}" |
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320 | |
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321 | JobName="Job_${MemberDir}" |
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322 | |
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323 | # * Create directory if it doesn't exist and copy/link files |
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324 | if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then |
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325 | IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
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326 | IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
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327 | ln -s ../../COMP |
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328 | ln -s ../../PARAM |
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329 | ln -s ../../POST |
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330 | ln -s ../../DRIVER |
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331 | IGCM_sys_Cd ${RUN_DIR} |
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332 | IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
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333 | IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/${JobName} |
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334 | |
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335 | # Dump command to be lauched |
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336 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qsub.${StartDir}.sh |
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337 | echo "${SUBMIT} ${JobName} ; cd -" >> ${RUN_DIR}/Qsub.${StartDir}.sh |
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338 | |
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339 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh |
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340 | echo "${libIGCM}/clean_month.job ; cd -" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh |
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341 | |
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342 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh |
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343 | echo "${libIGCM}/clean_year.job ; cd -" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh |
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344 | |
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345 | # * Update files : config.card, Job_, COMP/comp.card |
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346 | IGCM_ensemble_CastFilesUpdate ${DateBegin} ${DateEnd} ${RestartDate} |
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347 | |
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348 | # * Apply noise on restart file |
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349 | IGCM_ensemble_CastPerturbFile |
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350 | fi |
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351 | |
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352 | (( i = i + 1 )) |
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353 | done |
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354 | |
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355 | # Done. Save ${StartDir} submission text file |
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356 | IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} |
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357 | IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} |
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358 | IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} |
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359 | |
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360 | # - Next DateBegin |
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361 | echo "$DateBegin $PeriodLengthInDays" |
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362 | case ${ensemble_Ens_PERTURB_PERIODICITY} in |
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363 | *[Yy]|*[Mm]) |
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364 | (( DateBegin = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${PeriodLengthInDays} ) )) |
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365 | ;; |
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366 | esac |
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367 | echo "New DateBegin = $DateBegin" |
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368 | echo "========================================================================" |
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369 | done |
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370 | IGCM_debug_PopStack "IGCM_ensemble_CastPeriodicStarts" |
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371 | } |
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372 | |
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373 | function IGCM_ensemble_CastNonPeriodicStarts |
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374 | { |
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375 | IGCM_debug_PushStack "IGCM_ensemble_CastNonPeriodicStarts" |
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376 | |
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377 | #.. Manage non periodic starts => Loop over DateBegin .. |
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378 | # ========================== |
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379 | |
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380 | [ ${CastNonPeriodicStart} = false ] && return |
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381 | |
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382 | echo |
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383 | IGCM_debug_Print 1 "Manage non periodic starts" |
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384 | |
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385 | DateNum=0 |
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386 | # ... Loop over ensemble_Ens_PERTURB_NONPERIODIC ... |
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387 | echo ">${DateNum}<" |
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388 | echo ">${#ensemble_Ens_PERTURB_NONPERIODIC[*]}<" |
---|
389 | while [ ${DateNum} -lt ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} ] ; do |
---|
390 | DateBegin=${ensemble_Ens_PERTURB_NONPERIODIC[${DateNum}]} |
---|
391 | Duree=${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[${DateNum}]} |
---|
392 | echo ">${DateBegin}<" |
---|
393 | echo ">${Duree}<" |
---|
394 | |
---|
395 | # - Determine number of day(s) in LENGTH_NONPERIODIC |
---|
396 | IGCM_date_GetYearMonth ${DateBegin} year month |
---|
397 | DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${Duree} ) - 1 )) |
---|
398 | |
---|
399 | # - Build directory name |
---|
400 | echo "========================================================================" |
---|
401 | echo "ensemble_Ens_PERTURB_NAME = ${ensemble_Ens_PERTURB_NAME}" |
---|
402 | IGCM_ensemble_CastDirectoryName ${ensemble_Ens_PERTURB_NAME} ${Duree} $year $month $StartDir |
---|
403 | |
---|
404 | # - Determine DateEnd |
---|
405 | (( DateEnd = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) )) |
---|
406 | echo ">${DateEnd}<" |
---|
407 | echo "tout va bien 1" |
---|
408 | |
---|
409 | # - Determine RestartDate |
---|
410 | (( Offset = -1 )) |
---|
411 | (( RestartDate = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${Offset} ) )) |
---|
412 | |
---|
413 | IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" |
---|
414 | |
---|
415 | # - Does $StartDir already exist ? |
---|
416 | #echo "tout va bien 2" ${StartDir} |
---|
417 | if [ ! -d ${SUBMIT_DIR}/${StartDir} ] ; then |
---|
418 | echo "create dir" |
---|
419 | IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} |
---|
420 | IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} |
---|
421 | ln -s ../../.resol . |
---|
422 | ln -s ../../.libmpi . |
---|
423 | IGCM_sys_Cd ${RUN_DIR} |
---|
424 | echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt |
---|
425 | fi |
---|
426 | PeriodDateEnd=$( grep -m1 ${StartDir} ${RUN_DIR}/CreatedDir.txt | cut -f2 -d\ ) |
---|
427 | |
---|
428 | # - Create directory in which to store new restart files if it does'nt already exist |
---|
429 | RestartDir=${STORAGE}/IGCM_IN/${config_UserChoices_TagName}/${StartDir} |
---|
430 | IGCM_sys_MkdirArchive ${RestartDir} |
---|
431 | |
---|
432 | # - Loop over members |
---|
433 | i=0 |
---|
434 | while [ $i -lt ${ensemble_Ens_PERTURB_MEMBER} ] ; do |
---|
435 | MemberDir="${StartDir}${Alpha[$i]}" |
---|
436 | IGCM_debug_Print 3 "${MemberDir}" |
---|
437 | |
---|
438 | JobName="Job_${MemberDir}" |
---|
439 | |
---|
440 | # * Create directory if it doesn't exist and copy files |
---|
441 | if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then |
---|
442 | IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
443 | #IGCM_sys_Cp -r COMP/ PARAM/ ${StartDir}/${MemberDir} |
---|
444 | IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
445 | ln -s ../../COMP |
---|
446 | ln -s ../../PARAM |
---|
447 | ln -s ../../POST |
---|
448 | ln -s ../../DRIVER |
---|
449 | IGCM_sys_Cd ${RUN_DIR} |
---|
450 | IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
451 | IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} |
---|
452 | |
---|
453 | # Dump command to be lauched |
---|
454 | echo "cd ${StartDir}/${MemberDir}/ ;" >> Qsub.${StartDir}.sh |
---|
455 | echo "${SUBMIT} ${JobName} ; cd -" >> Qsub.${StartDir}.sh |
---|
456 | |
---|
457 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh |
---|
458 | echo "${libIGCM}/clean_month.job ; cd -" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh |
---|
459 | |
---|
460 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh |
---|
461 | echo "${libIGCM}/clean_year.job ; cd -" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh |
---|
462 | |
---|
463 | # * Update files : config.card, Job_, COMP/comp.card |
---|
464 | echo "${PeriodDateEnd} ? ${DateEnd}" |
---|
465 | if [ ${PeriodDateEnd} -gt ${DateEnd} ] ; then |
---|
466 | DateEnd=${PeriodDateEnd} |
---|
467 | fi |
---|
468 | IGCM_ensemble_CastFilesUpdate ${DateBegin} ${DateEnd} ${RestartDate} |
---|
469 | |
---|
470 | # * Apply noise on restart file |
---|
471 | IGCM_ensemble_CastPerturbFile |
---|
472 | fi |
---|
473 | |
---|
474 | (( i = i + 1 )) |
---|
475 | done |
---|
476 | |
---|
477 | # Done. Save ${StartDir} submission text file |
---|
478 | IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} |
---|
479 | IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} |
---|
480 | IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} |
---|
481 | |
---|
482 | (( DateNum = DateNum + 1 )) |
---|
483 | done |
---|
484 | IGCM_debug_PopStack "IGCM_ensemble_CastNonPeriodicStarts" |
---|
485 | } |
---|
486 | |
---|
487 | function IGCM_ensemble_CastMemberList |
---|
488 | { |
---|
489 | IGCM_debug_PushStack "IGCM_ensemble_CastMemberList" |
---|
490 | |
---|
491 | if [ ${CastMemberList} = false ] ; then |
---|
492 | IGCM_debug_PopStack "IGCM_ensemble_CastMemberList" |
---|
493 | return |
---|
494 | fi |
---|
495 | |
---|
496 | echo |
---|
497 | IGCM_debug_Print 1 "Manage members list" |
---|
498 | |
---|
499 | #.. Manage members list .. |
---|
500 | # ====================== |
---|
501 | |
---|
502 | # DateBegin |
---|
503 | eval DateBegin=\${ensemble_Ens_PERTURB_BEGIN_INIT} |
---|
504 | |
---|
505 | IGCM_date_GetYearMonth ${DateBegin} year month |
---|
506 | |
---|
507 | # - Determine number of day(s) in LENGTH |
---|
508 | DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_PERTURB_LENGTH} ) - 1 )) |
---|
509 | |
---|
510 | # - Determine DateEnd |
---|
511 | DateEnd=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) |
---|
512 | |
---|
513 | # bad hack enforce yearly for parent directory name |
---|
514 | # - Build directory name |
---|
515 | IGCM_ensemble_CastDirectoryName ${ensemble_Ens_PERTURB_NAME} 1Y $year $month $StartDir |
---|
516 | |
---|
517 | # - Determine RestartDate |
---|
518 | (( Offset = -1 )) |
---|
519 | RestartDate=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${Offset} ) |
---|
520 | |
---|
521 | IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" |
---|
522 | echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt |
---|
523 | |
---|
524 | # - Create directory for current DateBegin |
---|
525 | if [ ! -d ${StartDir} ] ; then |
---|
526 | IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} |
---|
527 | IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} |
---|
528 | ln -s ../../.resol . |
---|
529 | ln -s ../../.libmpi . |
---|
530 | IGCM_sys_Cd ${RUN_DIR} |
---|
531 | fi |
---|
532 | |
---|
533 | # - Create directory to store modified restart files |
---|
534 | RestartDir=${STORAGE}/IGCM_IN/${config_UserChoices_TagName}/${StartDir} |
---|
535 | IGCM_sys_MkdirArchive ${RestartDir} |
---|
536 | |
---|
537 | # - Loop over members |
---|
538 | i=0 |
---|
539 | nbmember=${#ensemble_Ens_PERTURB_MEMBER_LIST[*]} |
---|
540 | while [ $i -lt $nbmember ] ; do |
---|
541 | MemberDir=${ensemble_Ens_PERTURB_MEMBER_NAMESLIST[${i}]} |
---|
542 | MemberVec=${ensemble_Ens_PERTURB_MEMBER_LIST[${i}]} |
---|
543 | |
---|
544 | JobName="Job_${MemberDir}" |
---|
545 | echo |
---|
546 | IGCM_debug_Print 3 "${MemberDir}" |
---|
547 | |
---|
548 | # * Create directory if it doesn't exist and copy/link files |
---|
549 | if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then |
---|
550 | IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
551 | IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
552 | ln -s ../../COMP |
---|
553 | ln -s ../../PARAM |
---|
554 | ln -s ../../POST |
---|
555 | ln -s ../../DRIVER |
---|
556 | IGCM_sys_Cd ${RUN_DIR} |
---|
557 | IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
558 | IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/${JobName} |
---|
559 | |
---|
560 | # Dump command to be lauched |
---|
561 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qsub.${StartDir}.sh |
---|
562 | echo "${SUBMIT} ${JobName} ; cd -" >> ${RUN_DIR}/Qsub.${StartDir}.sh |
---|
563 | |
---|
564 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh |
---|
565 | echo "${libIGCM}/clean_month.job ; cd -" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh |
---|
566 | |
---|
567 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh |
---|
568 | echo "${libIGCM}/clean_year.job ; cd -" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh |
---|
569 | |
---|
570 | # * Update files : config.card, Job_, COMP/comp.card |
---|
571 | IGCM_ensemble_CastFilesUpdate ${DateBegin} ${DateEnd} ${RestartDate} |
---|
572 | |
---|
573 | # * Apply noise on restart file |
---|
574 | IGCM_ensemble_CastPerturbFile |
---|
575 | fi |
---|
576 | |
---|
577 | (( i = i + 1 )) |
---|
578 | done |
---|
579 | |
---|
580 | # Done. Save ${StartDir} submission text file |
---|
581 | IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} |
---|
582 | IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} |
---|
583 | IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} |
---|
584 | |
---|
585 | IGCM_debug_PopStack "IGCM_ensemble_CastMemberList" |
---|
586 | } |
---|
587 | |
---|
588 | function IGCM_ensemble_CastFilesUpdate |
---|
589 | { |
---|
590 | IGCM_debug_PushStack "IGCM_ensemble_CastFilesUpdate" |
---|
591 | |
---|
592 | # Debug Print : |
---|
593 | echo |
---|
594 | IGCM_debug_Print 1 "IGCM_ensemble_CastFilesUpdate :" |
---|
595 | |
---|
596 | HumanDateBegin=$( IGCM_date_ConvertFormatToHuman ${1} ) |
---|
597 | HumanDateEnd=$( IGCM_date_ConvertFormatToHuman ${2} ) |
---|
598 | HumanRestartDate=$( IGCM_date_ConvertFormatToHuman ${3} ) |
---|
599 | # ==> config.card |
---|
600 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleRun 'y' |
---|
601 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleName ${ensemble_Ens_PERTURB_NAME} |
---|
602 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleDate ${StartDir} |
---|
603 | |
---|
604 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices JobName ${MemberDir} |
---|
605 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices DateBegin ${HumanDateBegin} |
---|
606 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices DateEnd ${HumanDateEnd} |
---|
607 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts OverRule "n" |
---|
608 | |
---|
609 | for comp in ${config_ListOfComponents[*]} ; do |
---|
610 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} Restart "y" |
---|
611 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} RestartDate ${HumanRestartDate} |
---|
612 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} RestartJobName ${ensemble_Ens_PERTURB_INITFROM} |
---|
613 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} RestartPath ${ensemble_Ens_PERTURB_INITPATH} |
---|
614 | done |
---|
615 | |
---|
616 | # ==> Job |
---|
617 | sed -e "s/\(#.*Script_Output_\)${config_UserChoices_JobName}\(\.*\)/\1${MemberDir}\2/" \ |
---|
618 | -e "s/\(#.*\)${config_UserChoices_JobName}\(\.*\)/\1${MemberDir} \2/" \ |
---|
619 | -e "s/^PeriodNb=.*/PeriodNb=60/" \ |
---|
620 | ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} > Job_${MemberDir}.tmp |
---|
621 | IGCM_sys_Mv Job_${MemberDir}.tmp ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} |
---|
622 | |
---|
623 | IGCM_debug_PopStack "IGCM_ensemble_CastFilesUpdate" |
---|
624 | } |
---|
625 | |
---|
626 | function IGCM_ensemble_CastDirectoryName |
---|
627 | { |
---|
628 | IGCM_debug_PushStack "IGCM_ensemble_CastDirectoryName" |
---|
629 | |
---|
630 | #.. Debug Print .. |
---|
631 | echo |
---|
632 | IGCM_debug_Print 1 "IGCM_ensemble_CastDirectoryName :" |
---|
633 | echo |
---|
634 | |
---|
635 | Name=$1 |
---|
636 | Duree=$2 |
---|
637 | year=$3 |
---|
638 | month=$4 |
---|
639 | |
---|
640 | # - Build directory name |
---|
641 | case ${Duree} in |
---|
642 | *Y|*y) |
---|
643 | siecle="$( echo $year | cut -c1-2 )" |
---|
644 | siecle=$( (( $siecle - 18 )) ) |
---|
645 | StartYear="${siecle}$( echo $year | cut -c3-4 )" |
---|
646 | StartDir="${Name}${StartYear}" |
---|
647 | ;; |
---|
648 | *M|*m) |
---|
649 | echo $month |
---|
650 | siecle="$( echo $year | cut -c1-2 )" |
---|
651 | siecle=$( (( $siecle - 18 )) ) |
---|
652 | StartYear="${siecle}$( echo $year | cut -c3-4 )" |
---|
653 | StartMonth="${AlphaMonth[ (( 10#${month} - 1 )) ]}" |
---|
654 | StartDir="${Name}${StartYear}${StartMonth}" |
---|
655 | ;; |
---|
656 | esac |
---|
657 | |
---|
658 | IGCM_debug_PopStack "IGCM_ensemble_CastDirectoryName" |
---|
659 | } |
---|
660 | |
---|
661 | function IGCM_ensemble_CastPerturbFile |
---|
662 | { |
---|
663 | IGCM_debug_PushStack "IGCM_ensemble_CastPerturbFile" |
---|
664 | |
---|
665 | typeset i i_ j |
---|
666 | typeset -Z4 j4 |
---|
667 | typeset file_out file_out_ |
---|
668 | |
---|
669 | #.. Debug Print .. |
---|
670 | echo |
---|
671 | IGCM_debug_Print 1 "IGCM_ensemble_CastPerturbFile :" |
---|
672 | |
---|
673 | #.. FileIn ? => RestartDate .. |
---|
674 | DirIn="${ensemble_Ens_PERTURB_INITPATH}/${ensemble_Ens_PERTURB_INITFROM}/${PerturbComp}/Restart" |
---|
675 | DirInTar="${ensemble_Ens_PERTURB_INITPATH}/${ensemble_Ens_PERTURB_INITFROM}/RESTART" |
---|
676 | FileIn="${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${PerturbFile}" |
---|
677 | DirOut="${RestartDir}/${MemberDir}/${PerturbComp}/Restart" |
---|
678 | |
---|
679 | # * Create member restart directory |
---|
680 | IGCM_sys_TestDirArchive ${DirOut} |
---|
681 | RET=$? |
---|
682 | if [ $RET -gt 0 ] ; then |
---|
683 | IGCM_sys_MkdirArchive ${DirOut} |
---|
684 | fi |
---|
685 | |
---|
686 | FileOut="${MemberDir}_${RestartDate}_${PerturbFile}" |
---|
687 | IGCM_debug_Print 1 "FileIn = ${DirIn}/${FileIn}" |
---|
688 | IGCM_debug_Print 1 "FileOut = ${DirOut}/${FileOut}.nc" |
---|
689 | |
---|
690 | IGCM_sys_TestFileArchive ${DirOut}/${FileOut}.nc |
---|
691 | RET=$? |
---|
692 | if [ $RET -gt 0 ] ; then |
---|
693 | |
---|
694 | # * Look for the restart file we apply the noise to |
---|
695 | |
---|
696 | # restart file list pertaining to the component we apply the noise to |
---|
697 | # but not being the precise restart file we will apply the noise to |
---|
698 | unset OtherFileInList |
---|
699 | # generic restart filename list (like flxat, sstoc, restart, ...) |
---|
700 | unset OtherGenericList |
---|
701 | |
---|
702 | if ( [ X${FileName0} != X${NULL_STR} ] && [ X${FileName0} != XNONE ] ) ; then |
---|
703 | (( i=0 )) |
---|
704 | until [ $i -ge ${NbFiles} ]; do |
---|
705 | |
---|
706 | (( i_ = i+1 )) |
---|
707 | eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
708 | eval file_out=${file_out_} |
---|
709 | |
---|
710 | generic_restart_file_name_out=$( basename ${file_out} .nc ) |
---|
711 | |
---|
712 | if [ ! ${generic_restart_file_name_out} = ${PerturbFile} ] ; then |
---|
713 | set +A OtherFileInList ${OtherFileInList[*]} ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic_restart_file_name_out}\*.nc |
---|
714 | set +A OtherGenericList ${OtherGenericList[*]} ${generic_restart_file_name_out} |
---|
715 | fi |
---|
716 | |
---|
717 | (( i=i+3 )) |
---|
718 | done |
---|
719 | fi |
---|
720 | # How many restart files other than the one we will apply the noise to |
---|
721 | NbOtherFiles=${#OtherGenericList[*]} |
---|
722 | |
---|
723 | ########################## |
---|
724 | # TO BE A FUNCTION BEGIN # |
---|
725 | ########################## |
---|
726 | |
---|
727 | if [ $( IGCM_sys_TestFileBuffer ${DirIn}/${FileIn}*.nc ; echo $? ) = 0 ] ; then |
---|
728 | IGCM_debug_Print 3 "Buffered restart" |
---|
729 | Buffered=true |
---|
730 | Archived=false |
---|
731 | Tared=false |
---|
732 | nb_restart_file=$(IGCM_sys_CountFileBuffer ${DirIn}/${FileIn}_????.nc) |
---|
733 | elif [ $( IGCM_sys_TestFileArchive ${DirIn}/${FileIn}*.nc ; echo $? ) = 0 ] ; then |
---|
734 | IGCM_debug_Print 3 "Archived restart" |
---|
735 | Buffered=false |
---|
736 | Archived=true |
---|
737 | Tared=false |
---|
738 | nb_restart_file=$(IGCM_sys_CountFileArchive ${DirIn}/${FileIn}_????.nc) |
---|
739 | else |
---|
740 | IGCM_debug_Print 3 "Tared restart" |
---|
741 | Buffered=false |
---|
742 | Archived=false |
---|
743 | Tared=true |
---|
744 | |
---|
745 | # Look for the tar file we want if we did not found it already |
---|
746 | for PotentialTarFile in $( find ${ensemble_Ens_PERTURB_INITPATH}/${ensemble_Ens_PERTURB_INITFROM}/RESTART -name "${ensemble_Ens_PERTURB_INITFROM}_*restart*.tar" -print ) ; do |
---|
747 | IsMatching=$( echo ${PotentialTarFile##*/} | sed "s:_restart::" | sed "s:^${ensemble_Ens_PERTURB_INITFROM}_::" | sed "s:\.tar$::" | gawk -F_ -v restartdate=${RestartDate} '{if (($1 <= restartdate) && ($2 >= restartdate)) {print $1"_"$2}}' ) |
---|
748 | if [ ! X${IsMatching} = X ] ; then |
---|
749 | TarFileFound=${PotentialTarFile} |
---|
750 | break |
---|
751 | fi |
---|
752 | done |
---|
753 | |
---|
754 | # Extract relevant restart files |
---|
755 | IGCM_debug_Print 1 "tar xvf ${TarFileFound} ${PerturbComp}_${FileIn}*.nc ${OtherFileInList[*]}" |
---|
756 | tar xvf ${TarFileFound} ${PerturbComp}_${FileIn}*.nc ${OtherFileInList[*]} |
---|
757 | nb_restart_file=$( IGCM_sys_CountFileBuffer ${PerturbComp}_${FileIn}_????.nc ) |
---|
758 | fi |
---|
759 | |
---|
760 | # Move around and perturb restart files so as to be able to start hindcast/forecast simulation members |
---|
761 | if [ ${nb_restart_file} -gt 1 ] ; then |
---|
762 | j=0 |
---|
763 | until [ $j -ge ${nb_restart_file} ]; do |
---|
764 | j4=${j} |
---|
765 | if [ X${Buffered} = Xtrue ] ; then |
---|
766 | IGCM_sys_GetBuffer ${DirIn}/${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc |
---|
767 | |
---|
768 | cd ${DirOut} |
---|
769 | for generic in ${OtherGenericList[*]} ; do |
---|
770 | ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}_${j4}.nc |
---|
771 | done |
---|
772 | cd - |
---|
773 | |
---|
774 | elif [ X${Archived} = Xtrue ] ; then |
---|
775 | IGCM_sys_Get ${DirIn}/${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc |
---|
776 | |
---|
777 | for generic in ${OtherGenericList[*]} ; do |
---|
778 | IGCM_sys_RshArchive "cd ${DirOut} ; ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}_${j4}.nc" |
---|
779 | done |
---|
780 | |
---|
781 | elif [ X${Tared} = Xtrue ] ; then |
---|
782 | IGCM_debug_Print 2 "IGCM_sys_Mv ${PerturbComp}_${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc" |
---|
783 | IGCM_sys_Mv ${PerturbComp}_${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc |
---|
784 | |
---|
785 | for generic in ${OtherGenericList[*]} ; do |
---|
786 | IGCM_sys_Mv ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${DirOut}/${MemberDir}_${RestartDate}_${generic}_${j4}.nc |
---|
787 | done |
---|
788 | |
---|
789 | fi |
---|
790 | (( j=j+1 )) |
---|
791 | done |
---|
792 | else |
---|
793 | if [ X${Buffered} = Xtrue ] ; then |
---|
794 | IGCM_sys_GetBuffer ${DirIn}/${FileIn}.nc ${RUN_DIR}/${FileOut}.nc |
---|
795 | |
---|
796 | cd ${DirOut} |
---|
797 | for generic in ${OtherGenericList[*]} ; do |
---|
798 | ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}.nc |
---|
799 | done |
---|
800 | cd - |
---|
801 | |
---|
802 | elif [ X${Archived} = Xtrue ] ; then |
---|
803 | IGCM_sys_Get ${DirIn}/${FileIn}.nc ${RUN_DIR}/${FileOut}.nc |
---|
804 | |
---|
805 | for generic in ${OtherGenericList[*]} ; do |
---|
806 | IGCM_sys_RshArchive "cd ${DirOut} ; ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}.nc" |
---|
807 | done |
---|
808 | |
---|
809 | elif [ X${Tared} = Xtrue ] ; then |
---|
810 | IGCM_debug_Print 2 "IGCM_sys_Mv ${PerturbComp}_${FileIn}.nc ${RUN_DIR}/${FileOut}.nc" |
---|
811 | IGCM_sys_Mv ${PerturbComp}_${FileIn}.nc ${RUN_DIR}/${FileOut}.nc |
---|
812 | |
---|
813 | for generic in ${OtherGenericList[*]} ; do |
---|
814 | IGCM_debug_Print 2 "IGCM_sys_Mv ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${DirOut}/${MemberDir}_${RestartDate}_${generic}.nc" |
---|
815 | IGCM_sys_Mv ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${DirOut}/${MemberDir}_${RestartDate}_${generic}.nc |
---|
816 | done |
---|
817 | |
---|
818 | fi |
---|
819 | fi |
---|
820 | |
---|
821 | ######################## |
---|
822 | # TO BE A FUNCTION END # |
---|
823 | ######################## |
---|
824 | |
---|
825 | # treat the perturbation on different components by looking at the executable name |
---|
826 | |
---|
827 | case ${PerturbExe} in |
---|
828 | (AddNoise) |
---|
829 | IGCM_sys_Chmod 644 ${RUN_DIR}/${FileOut}.nc |
---|
830 | |
---|
831 | IGCM_debug_Print 1 "${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PerturbAmp}" |
---|
832 | echo |
---|
833 | |
---|
834 | ${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PerturbAmp} > /dev/null 2>&1 |
---|
835 | if [ $? -ne 0 ] ; then |
---|
836 | IGCM_debug_Exit "Abend $( basename ${PerturbExe} )" |
---|
837 | IGCM_debug_Verif_Exit |
---|
838 | fi |
---|
839 | IGCM_sys_Put_Out ${RUN_DIR}/${FileOut}.nc ${DirOut}/ 644 |
---|
840 | ;; |
---|
841 | (AddPertu3DOCE) |
---|
842 | # where to find the pattern we apply to the restart |
---|
843 | PatternFile=${ensemble_Ens_PERTURB_MEMBER_INITPATH}/${ensemble_Ens_PERTURB_MEMBER_INITFROM}/${MemberVec}.nc |
---|
844 | |
---|
845 | # where to find the land mask for the grid |
---|
846 | MaskFile=${ensemble_Ens_PERTURB_MASKPATH}/${PerturbMask} |
---|
847 | |
---|
848 | # if there is multiple restart files rebuild restart file |
---|
849 | if [ ${nb_restart_file} -gt 1 ] ; then |
---|
850 | IGCM_debug_Print 1 "rebuild files ${FileOut}_????.nc" |
---|
851 | IGCM_sys_rebuild ${RUN_DIR}/${FileOut}.nc ${RUN_DIR}/${FileOut}_????.nc |
---|
852 | fi |
---|
853 | |
---|
854 | # there is now a single restart file |
---|
855 | IGCM_sys_Chmod 644 ${RUN_DIR}/${FileOut}.nc |
---|
856 | |
---|
857 | IGCM_debug_Print 1 "${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PatternFile} ${MaskFile}" |
---|
858 | echo |
---|
859 | |
---|
860 | # add pattern to restart file on variable PerturbVar |
---|
861 | ${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PatternFile} ${MaskFile} > /dev/null 2>&1 |
---|
862 | if [ $? -ne 0 ] ; then |
---|
863 | IGCM_debug_Exit "Abend $( basename ${PerturbExe} )" |
---|
864 | IGCM_debug_Verif_Exit |
---|
865 | fi |
---|
866 | IGCM_sys_Put_Out ${RUN_DIR}/${FileOut}.nc ${DirOut}/ 644 |
---|
867 | ;; |
---|
868 | esac |
---|
869 | |
---|
870 | fi |
---|
871 | |
---|
872 | #.. Update config.card.. |
---|
873 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} Restart "y" |
---|
874 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} RestartDate ${HumanRestartDate} |
---|
875 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} RestartJobName ${MemberDir} |
---|
876 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} RestartPath ${RestartDir}/ |
---|
877 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleType "Ens_PERTURB" |
---|
878 | |
---|
879 | IGCM_debug_PopStack "IGCM_ensemble_CastPerturbFile" |
---|
880 | } |
---|
881 | |
---|
882 | ############### Date ENSEMBLE ################# |
---|
883 | function IGCM_ensemble_DateInit |
---|
884 | { |
---|
885 | IGCM_debug_PushStack "IGCM_ensemble_DateInit" |
---|
886 | |
---|
887 | IGCM_sys_Mkdir ${RUN_DIR} |
---|
888 | |
---|
889 | IGCM_sys_Cp ${SUBMIT_DIR}/config.card ${RUN_DIR} |
---|
890 | IGCM_sys_Cp ${SUBMIT_DIR}/ensemble.card ${RUN_DIR} |
---|
891 | IGCM_sys_Cp ${SUBMIT_DIR}/Job_* ${RUN_DIR} |
---|
892 | IGCM_sys_Cp ${SUBMIT_DIR}/run.card.init ${RUN_DIR} |
---|
893 | if [ -f ${SUBMIT_DIR}/Qsub.* ]; then |
---|
894 | IGCM_sys_Cp ${SUBMIT_DIR}/Qsub.* ${RUN_DIR} |
---|
895 | fi |
---|
896 | if [ -f ${SUBMIT_DIR}/Qclean.* ]; then |
---|
897 | IGCM_sys_Cp ${SUBMIT_DIR}/Qclean.* ${RUN_DIR} |
---|
898 | fi |
---|
899 | |
---|
900 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE active |
---|
901 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE NAME |
---|
902 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE BEGIN_INIT |
---|
903 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE BEGIN_RESTART |
---|
904 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE END_INIT |
---|
905 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE PERIODICITY |
---|
906 | IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_DATE NONPERIODIC |
---|
907 | IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_DATE RESTART_NONPERIODIC |
---|
908 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE LENGTH |
---|
909 | IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_DATE LENGTH_NONPERIODIC |
---|
910 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITFROM |
---|
911 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITFROM_NONPERIODIC |
---|
912 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITPATH |
---|
913 | IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITPATH_NONPERIODIC |
---|
914 | IGCM_card_DefineVariableFromOption config.card UserChoices JobName |
---|
915 | IGCM_card_DefineVariableFromOption config.card UserChoices TagName |
---|
916 | IGCM_card_DefineVariableFromOption config.card UserChoices CalendarType |
---|
917 | IGCM_card_DefineArrayFromSection config.card ListOfComponents |
---|
918 | |
---|
919 | echo |
---|
920 | IGCM_debug_Print 1 "[Ens_DATE]" |
---|
921 | IGCM_debug_Print 1 "ACTIVE = ${ensemble_Ens_DATE_active}" |
---|
922 | IGCM_debug_Print 1 "NAME = ${ensemble_Ens_DATE_NAME}" |
---|
923 | IGCM_debug_Print 1 "BEGIN_INIT = ${ensemble_Ens_DATE_BEGIN_INIT}" |
---|
924 | IGCM_debug_Print 1 "END_INIT = ${ensemble_Ens_DATE_END_INIT}" |
---|
925 | IGCM_debug_Print 1 "PERIODICITY = ${ensemble_Ens_DATE_PERIODICITY}" |
---|
926 | IGCM_debug_Print 1 "BEGIN_RESTART = ${ensemble_Ens_DATE_BEGIN_RESTART}" |
---|
927 | IGCM_debug_Print 1 "NONPERIODIC = ${ensemble_Ens_DATE_NONPERIODIC[*]}" |
---|
928 | IGCM_debug_Print 1 "RESTART_NONPERIODIC = ${ensemble_Ens_DATE_RESTART_NONPERIODIC[*]}" |
---|
929 | IGCM_debug_Print 1 "LENGTH = ${ensemble_Ens_DATE_LENGTH}" |
---|
930 | IGCM_debug_Print 1 "LENGTH_NONPERIODIC = ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[*]}" |
---|
931 | IGCM_debug_Print 1 "INITFROM = ${ensemble_Ens_DATE_INITFROM}" |
---|
932 | IGCM_debug_Print 1 "INITFROM_NONPERIODIC = ${ensemble_Ens_DATE_INITFROM_NONPERIODIC[*]}" |
---|
933 | IGCM_debug_Print 1 "INITPATH = ${ensemble_Ens_DATE_INITPATH}" |
---|
934 | IGCM_debug_Print 1 "INITPATH_NONPERIODIC = ${ensemble_Ens_DATE_INITPATH_NONPERIODIC[*]}" |
---|
935 | IGCM_debug_Print 1 "JobName = ${config_UserChoices_JobName}" |
---|
936 | IGCM_debug_Print 1 "TagName = ${config_UserChoices_TagName}" |
---|
937 | IGCM_debug_Print 1 "CalendarType = ${config_UserChoices_CalendarType}" |
---|
938 | IGCM_debug_Print 1 "ListOfComponents = ${config_ListOfComponents[*]}" |
---|
939 | echo "" |
---|
940 | |
---|
941 | ensemble_Ens_DATE_MEMBER=1 # actually use only 1 member |
---|
942 | IGCM_ensemble_SetAlpha ${ensemble_Ens_DATE_MEMBER} |
---|
943 | |
---|
944 | IGCM_debug_Print 1 "Check args..." |
---|
945 | DatePeriodicStart=false |
---|
946 | DateNonPeriodicStart=false |
---|
947 | |
---|
948 | # ... Check LENGTH ... |
---|
949 | case ${ensemble_Ens_DATE_LENGTH} in |
---|
950 | *[Yy]|*[Mm]) |
---|
951 | IGCM_debug_Print 1 "Default simulation duration : ${ensemble_Ens_DATE_LENGTH}" ;; |
---|
952 | *) |
---|
953 | IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_LENGTH} invalid LENGTH" |
---|
954 | IGCM_debug_Exit "Choose a value in choose in *Y or *M" |
---|
955 | IGCM_debug_Verif_Exit ;; |
---|
956 | esac |
---|
957 | |
---|
958 | # *************************************** |
---|
959 | # A few checks Period case: |
---|
960 | # *************************************** |
---|
961 | # if all Periodic params are not filled: desactivate Periodic mode |
---|
962 | totalPeriodArgs=4 |
---|
963 | periodFillArgs=0 |
---|
964 | |
---|
965 | if [[ X${ensemble_Ens_DATE_BEGIN_RESTART} != "X" ]]; then |
---|
966 | (( periodFillArgs = periodFillArgs + 1 )) |
---|
967 | fi |
---|
968 | |
---|
969 | if [[ X${ensemble_Ens_DATE_BEGIN_INIT} != "X" ]]; then |
---|
970 | (( periodFillArgs = periodFillArgs + 1 )) |
---|
971 | fi |
---|
972 | |
---|
973 | if [[ X${ensemble_Ens_DATE_END_INIT} != "X" ]]; then |
---|
974 | (( periodFillArgs = periodFillArgs + 1 )) |
---|
975 | fi |
---|
976 | |
---|
977 | if [[ X${ensemble_Ens_DATE_PERIODICITY} != "X" ]]; then |
---|
978 | (( periodFillArgs = periodFillArgs + 1 )) |
---|
979 | |
---|
980 | # ... Check PERIODICITY ... |
---|
981 | case ${ensemble_Ens_DATE_PERIODICITY} in |
---|
982 | *[Yy]|*[Mm]) |
---|
983 | IGCM_debug_Print 1 "Periodic length : ${ensemble_Ens_DATE_PERIODICITY}" ;; |
---|
984 | *) |
---|
985 | IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_PERIODICITY} : invalid PERIODICITY" |
---|
986 | IGCM_debug_Exit "Choose a value in *Y or *M" |
---|
987 | IGCM_debug_Verif_Exit ;; |
---|
988 | esac |
---|
989 | fi # if periodicity |
---|
990 | |
---|
991 | if [[ ${periodFillArgs} = ${totalPeriodArgs} ]]; then |
---|
992 | DatePeriodicStart=true |
---|
993 | else |
---|
994 | if [[ ${periodFillArgs} = 0 ]]; then |
---|
995 | IGCM_debug_Print 1 "Periodic start NOT ACTIVE" |
---|
996 | DatePeriodicStart=false |
---|
997 | else |
---|
998 | IGCM_debug_Exit "IGCM_ensemble_DateInit missing arguments for Periodic mode!" |
---|
999 | IGCM_debug_Exit "Get only ${periodFillArgs} on ${totalPeriodArgs} args. Check ${F_CFG_ENS} file." |
---|
1000 | IGCM_debug_Verif_Exit |
---|
1001 | fi |
---|
1002 | fi |
---|
1003 | |
---|
1004 | # *************************************** |
---|
1005 | # A few checks for the Non-Periodic case: |
---|
1006 | # *************************************** |
---|
1007 | if [[ ${#ensemble_Ens_DATE_NONPERIODIC[*]} != ${#ensemble_Ens_DATE_RESTART_NONPERIODIC[*]} ]] ; then |
---|
1008 | IGCM_debug_Exit "IGCM_ensemble_DateInit: NONPERIODIC and RESTART_NONPERIODIC lists have different sizes" |
---|
1009 | IGCM_debug_Verif_Exit |
---|
1010 | fi |
---|
1011 | |
---|
1012 | if [[ ${#ensemble_Ens_DATE_NONPERIODIC[*]} > 0 ]] && [[ ${ensemble_Ens_DATE_NONPERIODIC[*]} != _0_ ]]; then |
---|
1013 | DateNonPeriodicStart=true |
---|
1014 | |
---|
1015 | # Use LENGTH if no NONPERIODIC_LENGTH given |
---|
1016 | if [[ ${#ensemble_Ens_DATE_LENGTH_NONPERIODIC[*]} < ${#ensemble_Ens_DATE_NONPERIODIC[*]} ]] ; then |
---|
1017 | IGCM_debug_Print 1 "WARNING: LENGTH_NONPERIODIC is not fill (or not correctly). Use LENGTH value '${ensemble_Ens_DATE_LENGTH}' for all NONPERIODIC runs" |
---|
1018 | DateNum=0 |
---|
1019 | while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do |
---|
1020 | ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]=${ensemble_Ens_DATE_LENGTH} |
---|
1021 | (( DateNum = DateNum + 1 )) |
---|
1022 | done |
---|
1023 | fi |
---|
1024 | |
---|
1025 | # Use INITFROM if no INITFROM_NONPERIODIC given |
---|
1026 | if [ ${#ensemble_Ens_DATE_INITFROM_NONPERIODIC[*]} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; then |
---|
1027 | IGCM_debug_Print 1 "WARNING: INITFROM_NONPERIODIC is not fill (or not correctly). Use INITFROM value '${ensemble_Ens_DATE_INITFROM}' for all NONPERIODIC runs" |
---|
1028 | DateNum=0 |
---|
1029 | while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do |
---|
1030 | ensemble_Ens_DATE_INITFROM_NONPERIODIC[${DateNum}]=${ensemble_Ens_DATE_INITFROM} |
---|
1031 | (( DateNum = DateNum + 1 )) |
---|
1032 | done |
---|
1033 | fi |
---|
1034 | |
---|
1035 | # Use INITPATH if no INITPATH_NONPERIODIC given |
---|
1036 | if [ ${#ensemble_Ens_DATE_INITPATH_NONPERIODIC[*]} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; then |
---|
1037 | IGCM_debug_Print 1 "WARNING: INITPATH_NONPERIODIC is not fill (or not correctly). Use INITPATH value '${ensemble_Ens_DATE_INITPATH}' for all NONPERIODIC runs" |
---|
1038 | DateNum=0 |
---|
1039 | while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do |
---|
1040 | ensemble_Ens_DATE_INITPATH_NONPERIODIC[${DateNum}]=${ensemble_Ens_DATE_INITPATH} |
---|
1041 | (( DateNum = DateNum + 1 )) |
---|
1042 | done |
---|
1043 | fi |
---|
1044 | else |
---|
1045 | IGCM_debug_Print 1 "Non-Periodic start NOT ACTIVE" |
---|
1046 | DateNonPeriodicStart=false |
---|
1047 | fi |
---|
1048 | |
---|
1049 | if [[ ${DateNonPeriodicStart} = true ]]; then |
---|
1050 | DateNum=0 |
---|
1051 | while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do |
---|
1052 | # - Check LENGTH_NONPERIODIC |
---|
1053 | case ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]} in |
---|
1054 | *[Yy]|*[Mm]) |
---|
1055 | IGCM_debug_Print 1 "Non-periodic duration ${DateNum}: ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]}" |
---|
1056 | ;; |
---|
1057 | *) |
---|
1058 | IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]} : invalid NON PERIODIC LENGTH" |
---|
1059 | IGCM_debug_Exit "choose in *Y or *M" |
---|
1060 | IGCM_debug_Verif_Exit ;; |
---|
1061 | esac |
---|
1062 | |
---|
1063 | # - Check RESTART_NONPERIODIC |
---|
1064 | case ${ensemble_Ens_DATE_RESTART_NONPERIODIC[${DateNum}]} in |
---|
1065 | _0_) |
---|
1066 | IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_RESTART_NONPERIODIC[${DateNum}]} : invalid NON PERIODIC RESTART" |
---|
1067 | IGCM_debug_Verif_Exit ;; |
---|
1068 | esac |
---|
1069 | |
---|
1070 | (( DateNum = DateNum + 1 )) |
---|
1071 | done |
---|
1072 | fi # DateNonPeriodicStart = true |
---|
1073 | |
---|
1074 | IGCM_debug_PopStack "IGCM_ensemble_DateInit" |
---|
1075 | } |
---|
1076 | |
---|
1077 | function IGCM_ensemble_DatePeriodicStarts |
---|
1078 | { |
---|
1079 | IGCM_debug_PushStack "IGCM_ensemble_DatePeriodicStarts" |
---|
1080 | |
---|
1081 | [ ${DatePeriodicStart} = false ] && return |
---|
1082 | |
---|
1083 | echo |
---|
1084 | IGCM_debug_Print 1 ">>> MANAGE PERIODIC STARTS <<<" |
---|
1085 | |
---|
1086 | #.. Manage periodic starts .. |
---|
1087 | # ====================== |
---|
1088 | |
---|
1089 | # - Build directory name |
---|
1090 | StartDir="${ensemble_Ens_DATE_NAME}" |
---|
1091 | |
---|
1092 | # - Create directory for current DateBegin |
---|
1093 | if [ ! -d ${StartDir} ] ; then |
---|
1094 | IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} |
---|
1095 | IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} |
---|
1096 | ln -s ../../.resol . |
---|
1097 | ln -s ../../.libmpi . |
---|
1098 | IGCM_sys_Cd ${RUN_DIR} |
---|
1099 | fi |
---|
1100 | |
---|
1101 | # ... Loop over DateBegin ... |
---|
1102 | eval DateBegin=\${ensemble_Ens_DATE_BEGIN_INIT} |
---|
1103 | eval RestartDate=\${ensemble_Ens_DATE_BEGIN_RESTART} |
---|
1104 | |
---|
1105 | DateNum=0 |
---|
1106 | while [ ${DateBegin} -le ${ensemble_Ens_DATE_END_INIT} ] ; do |
---|
1107 | IGCM_date_GetYearMonth ${DateBegin} year month |
---|
1108 | |
---|
1109 | echo "========================================================================" |
---|
1110 | echo "New DateBegin = $DateBegin" |
---|
1111 | |
---|
1112 | # - Determine number of day(s) in PERIODICITY |
---|
1113 | PeriodLengthInDays=$( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_DATE_PERIODICITY} ) |
---|
1114 | |
---|
1115 | # - Determine number of day(s) in LENGTH |
---|
1116 | DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_DATE_LENGTH} ) - 1 )) |
---|
1117 | |
---|
1118 | # - Determine DateEnd |
---|
1119 | (( DateEnd = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) )) |
---|
1120 | |
---|
1121 | IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" |
---|
1122 | echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt |
---|
1123 | |
---|
1124 | # - Loop over members (default =1 no member) |
---|
1125 | i=0 |
---|
1126 | while [ $i -lt ${ensemble_Ens_DATE_MEMBER} ] ; do |
---|
1127 | MemberDir="${ensemble_Ens_DATE_NAME}${DateNum}${Alpha[$i]}_per" |
---|
1128 | echo |
---|
1129 | IGCM_debug_Print 3 "${MemberDir}" |
---|
1130 | |
---|
1131 | JobName="Job_${MemberDir}" |
---|
1132 | |
---|
1133 | # * Create directory if it doesn't exist and copy/link files |
---|
1134 | if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then |
---|
1135 | IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
1136 | IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
1137 | ln -s ../../COMP |
---|
1138 | ln -s ../../PARAM |
---|
1139 | ln -s ../../POST |
---|
1140 | ln -s ../../DRIVER |
---|
1141 | IGCM_sys_Cd ${RUN_DIR} |
---|
1142 | IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
1143 | IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/${JobName} |
---|
1144 | |
---|
1145 | # Dump command to be lauched |
---|
1146 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qsub.${StartDir}.sh |
---|
1147 | echo "${SUBMIT} ${JobName} ; cd -" >> ${RUN_DIR}/Qsub.${StartDir}.sh |
---|
1148 | |
---|
1149 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh |
---|
1150 | echo "${libIGCM}/clean_month.job ; cd -" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh |
---|
1151 | |
---|
1152 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh |
---|
1153 | echo "${libIGCM}/clean_year.job ; cd -" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh |
---|
1154 | |
---|
1155 | # * Update files : config.card, Job_, COMP/comp.card |
---|
1156 | IGCM_ensemble_DateFilesUpdate ${DateBegin} ${DateEnd} ${RestartDate} |
---|
1157 | fi |
---|
1158 | |
---|
1159 | (( i = i + 1 )) |
---|
1160 | done |
---|
1161 | |
---|
1162 | # - Next DateBegin & RestartDate |
---|
1163 | echo "$DateBegin $PeriodLengthInDays" |
---|
1164 | case ${ensemble_Ens_DATE_PERIODICITY} in |
---|
1165 | *[Yy]|*[Mm]) |
---|
1166 | (( DateBegin = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${PeriodLengthInDays} ) )) |
---|
1167 | (( RestartDate = $( IGCM_date_AddDaysToGregorianDate ${RestartDate} ${PeriodLengthInDays} ) )) |
---|
1168 | ;; |
---|
1169 | esac |
---|
1170 | |
---|
1171 | (( DateNum = DateNum + 1 )) # increment number of restart date |
---|
1172 | done |
---|
1173 | |
---|
1174 | # Done. Save ${StartDir} submission text file |
---|
1175 | IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} |
---|
1176 | IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} |
---|
1177 | IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} |
---|
1178 | |
---|
1179 | IGCM_debug_PopStack "IGCM_ensemble_DatePeriodicStarts" |
---|
1180 | } |
---|
1181 | |
---|
1182 | function IGCM_ensemble_DateNonPeriodicStarts |
---|
1183 | { |
---|
1184 | IGCM_debug_PushStack "IGCM_ensemble_DateNonPeriodicStarts" |
---|
1185 | |
---|
1186 | #.. Manage non periodic starts => Loop over DateBegin .. |
---|
1187 | # ========================== |
---|
1188 | |
---|
1189 | [ ${DateNonPeriodicStart} = false ] && return |
---|
1190 | |
---|
1191 | echo |
---|
1192 | IGCM_debug_Print 1 ">>> MANAGE NON PERIODIC STARTS <<<" |
---|
1193 | |
---|
1194 | # - Build directory name |
---|
1195 | echo "" |
---|
1196 | echo "========================================================================" |
---|
1197 | echo "ensemble_Ens_DATE_NAME = ${ensemble_Ens_DATE_NAME}" |
---|
1198 | StartDir="${ensemble_Ens_DATE_NAME}" |
---|
1199 | |
---|
1200 | # - Does $StartDir already exist ? |
---|
1201 | if [ ! -d ${SUBMIT_DIR}/${StartDir} ] ; then |
---|
1202 | IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} |
---|
1203 | IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} |
---|
1204 | ln -s ../../.resol . |
---|
1205 | ln -s ../../.libmpi . |
---|
1206 | IGCM_sys_Cd ${RUN_DIR} |
---|
1207 | fi |
---|
1208 | |
---|
1209 | DateNum=0 |
---|
1210 | # ... Loop over ensemble_Ens_DATE_NONPERIODIC ... |
---|
1211 | while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do |
---|
1212 | DateBegin=${ensemble_Ens_DATE_NONPERIODIC[${DateNum}]} |
---|
1213 | Duree=${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]} |
---|
1214 | RestartDate=${ensemble_Ens_DATE_RESTART_NONPERIODIC[${DateNum}]} |
---|
1215 | InitFrom=${ensemble_Ens_DATE_INITFROM_NONPERIODIC[${DateNum}]} |
---|
1216 | InitPath=${ensemble_Ens_DATE_INITPATH_NONPERIODIC[${DateNum}]} |
---|
1217 | |
---|
1218 | # - Determine number of day(s) in LENGTH_NONPERIODIC |
---|
1219 | IGCM_date_GetYearMonth ${DateBegin} year month |
---|
1220 | DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${Duree} ) - 1 )) |
---|
1221 | |
---|
1222 | # - Determine DateEnd |
---|
1223 | (( DateEnd = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) )) |
---|
1224 | |
---|
1225 | IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" |
---|
1226 | echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt |
---|
1227 | |
---|
1228 | PeriodDateEnd=$( grep -m1 ${StartDir} ${RUN_DIR}/CreatedDir.txt | cut -f2 -d\ ) |
---|
1229 | |
---|
1230 | # - Loop over members |
---|
1231 | i=0 |
---|
1232 | while [ $i -lt ${ensemble_Ens_DATE_MEMBER} ] ; do |
---|
1233 | MemberDir="${ensemble_Ens_DATE_NAME}${DateNum}${Alpha[$i]}" |
---|
1234 | IGCM_debug_Print 3 "${MemberDir}" |
---|
1235 | |
---|
1236 | JobName="Job_${MemberDir}" |
---|
1237 | |
---|
1238 | # * Create directory if it doesn't exist and copy files |
---|
1239 | if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then |
---|
1240 | IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
1241 | IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
1242 | ln -s ../../COMP |
---|
1243 | ln -s ../../PARAM |
---|
1244 | ln -s ../../POST |
---|
1245 | ln -s ../../DRIVER |
---|
1246 | IGCM_sys_Cd ${RUN_DIR} |
---|
1247 | IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} |
---|
1248 | IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} |
---|
1249 | |
---|
1250 | # Dump command to be lauched |
---|
1251 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qsub.${StartDir}.sh |
---|
1252 | echo "${SUBMIT} ${JobName} ; cd -" >> ${RUN_DIR}/Qsub.${StartDir}.sh |
---|
1253 | |
---|
1254 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh |
---|
1255 | echo "${libIGCM}/clean_month.job ; cd -" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh |
---|
1256 | |
---|
1257 | echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh |
---|
1258 | echo "${libIGCM}/clean_year.job ; cd -" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh |
---|
1259 | |
---|
1260 | # * Update files : config.card, Job_, COMP/comp.card |
---|
1261 | IGCM_ensemble_DateFilesUpdate ${DateBegin} ${DateEnd} ${RestartDate} ${InitFrom} ${InitPath} |
---|
1262 | fi |
---|
1263 | |
---|
1264 | (( i = i + 1 )) |
---|
1265 | done |
---|
1266 | |
---|
1267 | # Done. Save ${StartDir} submission text file |
---|
1268 | IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} |
---|
1269 | IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} |
---|
1270 | IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} |
---|
1271 | |
---|
1272 | (( DateNum = DateNum + 1 )) |
---|
1273 | done |
---|
1274 | |
---|
1275 | # Done. Save ${StartDir} submission text file |
---|
1276 | IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} |
---|
1277 | IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} |
---|
1278 | IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} |
---|
1279 | |
---|
1280 | IGCM_debug_PopStack "IGCM_ensemble_DateNonPeriodicStarts" |
---|
1281 | } |
---|
1282 | |
---|
1283 | function IGCM_ensemble_DateFilesUpdate |
---|
1284 | { |
---|
1285 | IGCM_debug_PushStack "IGCM_ensemble_DateFilesUpdate" |
---|
1286 | |
---|
1287 | # Debug Print : |
---|
1288 | echo |
---|
1289 | IGCM_debug_Print 1 "IGCM_ensemble_DateFilesUpdate :" |
---|
1290 | |
---|
1291 | HumanDateBegin=$( IGCM_date_ConvertFormatToHuman ${1} ) |
---|
1292 | HumanDateEnd=$( IGCM_date_ConvertFormatToHuman ${2} ) |
---|
1293 | HumanRestartDate=$( IGCM_date_ConvertFormatToHuman ${3} ) |
---|
1294 | if [[ X${4} != "X" ]]; then |
---|
1295 | initFrom=${4} # non periodic config (INITFROM could be different between members) |
---|
1296 | else |
---|
1297 | initFrom=${ensemble_Ens_DATE_INITFROM} # periodic (same INITFROM value) |
---|
1298 | fi |
---|
1299 | |
---|
1300 | if [[ X${5} != "X" ]]; then |
---|
1301 | initPath=${5} # non periodic config (INITPATH could be different between members) |
---|
1302 | else |
---|
1303 | initPath=${ensemble_Ens_DATE_INITPATH} # periodic (same INITPATH value) |
---|
1304 | fi |
---|
1305 | |
---|
1306 | # ==> config.card |
---|
1307 | # [ENSEMBLE] |
---|
1308 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleRun 'y' |
---|
1309 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleName ${ensemble_Ens_DATE_NAME} |
---|
1310 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleDate ${HumanDateBegin} |
---|
1311 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleType "Ens_DATE" |
---|
1312 | |
---|
1313 | # [UserChoices] |
---|
1314 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices JobName ${MemberDir} |
---|
1315 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices DateBegin ${HumanDateBegin} |
---|
1316 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices DateEnd ${HumanDateEnd} |
---|
1317 | |
---|
1318 | # [Restarts] |
---|
1319 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts OverRule "y" |
---|
1320 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts RestartDate ${HumanRestartDate} |
---|
1321 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts RestartJobName ${initFrom} |
---|
1322 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts RestartPath ${initPath} |
---|
1323 | |
---|
1324 | # [ATM/OCE/...] |
---|
1325 | for comp in ${config_ListOfComponents[*]} ; do |
---|
1326 | IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} Restart "n" |
---|
1327 | done |
---|
1328 | unset initFrom |
---|
1329 | |
---|
1330 | # ==> Job |
---|
1331 | sed -e "s/\(#.*Script_Output_\)${config_UserChoices_JobName}\(\.*\)/\1${MemberDir}\2/" \ |
---|
1332 | -e "s/\(#.*\)${config_UserChoices_JobName}\(\.*\)/\1${MemberDir} \2/" \ |
---|
1333 | -e "s/^PeriodNb=.*/PeriodNb=60/" \ |
---|
1334 | ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} > Job_${MemberDir}.tmp |
---|
1335 | IGCM_sys_Mv Job_${MemberDir}.tmp ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} |
---|
1336 | |
---|
1337 | IGCM_debug_PopStack "IGCM_ensemble_DateFilesUpdate" |
---|
1338 | } |
---|
1339 | |
---|
1340 | ############### Parametric ENSEMBLE ################# |
---|