1 | #!/bin/ksh |
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2 | |
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3 | #************************************************************** |
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4 | # Author: Sebastien Denvil, Martial Mancip, Arnaud Caubel |
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5 | # Contact: Arnaud.Caubel__at__lsce.ipsl.fr |
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6 | # $Revision:: $ Revision of last commit |
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7 | # $Author:: $ Author of last commit |
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8 | # $Date:: $ Date of last commit |
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9 | # IPSL (2006) |
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10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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11 | # |
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12 | #************************************************************** |
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13 | |
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14 | #========================================================= |
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15 | # The documentation of this file can be automatically generated |
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16 | # if you use the prefix #D- for comments to be extracted. |
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17 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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18 | #========================================================= |
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19 | |
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20 | #D-#================================================== |
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21 | #D-LibIGCM_sys for Curie |
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22 | #D-#================================================== |
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23 | #D- |
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24 | #D- This ksh library if a layer under some usefull |
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25 | #D-environment variables and shell commands. |
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26 | #D-All those definitions depend on host particularities. |
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27 | #D-It manages a stack mechanism and test validity of operations. |
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28 | #D-All function described bellow must be prefixed by IGCM_sys. |
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29 | |
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30 | #==================================================== |
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31 | # libIGCM_sys PARAMETERS |
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32 | #==================================================== |
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33 | |
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34 | #==================================================== |
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35 | # set DEBUG_sys to true to output calls of function |
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36 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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37 | |
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38 | #==================================================== |
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39 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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40 | typeset -r DRYRUN=${DRYRUN:=0} |
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41 | |
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42 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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43 | # ------------------------------------------------------------------------------------- |
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44 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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45 | # | | Cp/Exe/param/files | | | | |
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46 | # | | Chmod Qsub | | | | |
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47 | # ------------------------------------------------------------------------------------- |
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48 | # | 0 | yes | yes | yes | yes | |
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49 | # ------------------------------------------------------------------------------------- |
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50 | # | 1 | yes | yes | yes | no | |
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51 | # ------------------------------------------------------------------------------------- |
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52 | # | 2 | yes | yes | no | no | |
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53 | # ------------------------------------------------------------------------------------- |
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54 | # | 3 | yes | no | no | no | |
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55 | # ------------------------------------------------------------------------------------- |
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56 | |
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57 | #===================================================== |
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58 | # Global Variables : |
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59 | #===================================================== |
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60 | # Language : "fr" or "en" |
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61 | typeset -r MYLANG="fr" |
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62 | |
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63 | #===================================================== |
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64 | # Host and user names |
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65 | # $hostname ou hostname |
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66 | typeset HOST=${HOST:=$( hostname )} |
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67 | # $username ou whoami |
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68 | typeset LOGIN=${LOGIN:=$( whoami )} |
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69 | # $hostname of the MASTER job |
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70 | typeset MASTER=curie |
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71 | |
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72 | #D- |
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73 | #D-#================================================== |
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74 | #D-Program used in libIGCM |
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75 | #D-#================================================== |
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76 | |
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77 | # Submit command |
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78 | typeset SUBMIT=${SUBMIT:=ccc_msub} |
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79 | # rsync with path |
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80 | typeset -r RSYNC=/usr/bin/rsync |
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81 | # RSYNC_opt args to rsync |
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82 | typeset -r RSYNC_opt="-va" |
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83 | # ie storage filesystem |
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84 | typeset -r STOREHOST=${MASTER} |
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85 | |
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86 | #==================================================== |
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87 | # Source default environment |
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88 | #==================================================== |
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89 | ##. /etc/profile |
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90 | |
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91 | #==================================================== |
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92 | # Set environment tools (ferret, nco, cdo) |
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93 | #==================================================== |
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94 | if [ X${TaskType} = Xcomputing ] ; then |
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95 | . /ccc/cont003/home/dsm/p86ipsl/.atlas_env_calcul_curie_ksh |
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96 | export PATH=${PATH}:/ccc/cont003/home/dsm/p86ipsl/AddNoise/src_X64/bin |
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97 | else |
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98 | . /ccc/cont003/home/dsm/p86ipsl/.atlas_env_post_curie_ksh |
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99 | fi |
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100 | |
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101 | #==================================================== |
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102 | # Specific for ocean additionnal diagnostic |
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103 | export FER_GO="$FER_GO /home/cont003/p86denv/IGCM_POST_UTIL/JNL /home/cont003/p86denv/GRAF /home/cont003/p86denv/GRAF/GO" |
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104 | export FER_PALETTE="$FER_PALETTE /home/cont003/p86denv/GRAF/PALET" |
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105 | |
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106 | #==================================================== |
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107 | # Host specific DIRECTORIES |
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108 | #==================================================== |
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109 | |
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110 | # ============ CESIUM START ============ # |
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111 | |
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112 | #==================================================== |
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113 | #- Mirror libIGCM from titane to cesium if needed |
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114 | #ROOTSYS=$( echo ${libIGCM} | gawk -F"/" '{print $3}' ) |
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115 | #if [ ! ${ROOTSYS} = "home" ] ; then |
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116 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true} |
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117 | #else |
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118 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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119 | #fi |
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120 | |
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121 | #==================================================== |
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122 | #- libIGCM_POST |
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123 | #if ( ${MirrorlibIGCM} ) ; then |
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124 | # PATHlibIGCM=$( echo ${libIGCM} | gawk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" ) |
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125 | # typeset -r libIGCM_POST=${HOME}/MIRROR/${PATHlibIGCM}/libIGCM |
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126 | #else |
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127 | # typeset -r libIGCM_POST=${libIGCM} |
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128 | #fi |
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129 | |
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130 | # ============ CESIUM END ============ # |
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131 | |
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132 | #==================================================== |
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133 | #- MirrorlibIGCM for frontend |
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134 | typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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135 | |
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136 | #==================================================== |
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137 | #- libIGCM_POST for frontend |
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138 | typeset -r libIGCM_POST=${libIGCM} |
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139 | |
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140 | #==================================================== |
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141 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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142 | typeset -r R_EXE="${MODIPSL}/bin" |
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143 | |
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144 | #==================================================== |
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145 | #- SUBMIT_DIR : submission dir |
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146 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${BRIDGE_MSUB_PWD}} |
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147 | |
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148 | #==================================================== |
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149 | #- IN |
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150 | typeset -r R_IN=${R_IN:=/ccc/work/cont003/dsm/p86ipsl/IGCM} |
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151 | typeset -r R_IN_ECMWF=${R_IN_ECMWF:=/ccc/work/cont003/dsm/p24data} |
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152 | |
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153 | #==================================================== |
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154 | #- ARCHIVE (dedicated to large files) |
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155 | typeset ARCHIVE=${CCCSTOREDIR} |
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156 | |
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157 | #==================================================== |
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158 | #- STORAGE (dedicated to small/medium files) |
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159 | typeset STORAGE=${CCCWORKDIR} |
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160 | |
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161 | #==================================================== |
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162 | #- R_OUT |
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163 | typeset R_OUT=${ARCHIVE}/IGCM_OUT |
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164 | |
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165 | #==================================================== |
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166 | #- R_FIG (hosting figures : monitoring and atlas, and/or small files) |
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167 | typeset R_FIG=${STORAGE}/IGCM_OUT |
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168 | |
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169 | #==================================================== |
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170 | #- R_BUF (ONLY FOR double copy an scratch) |
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171 | typeset -r R_BUF=${SCRATCHDIR}/IGCM_OUT |
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172 | |
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173 | #==================================================== |
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174 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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175 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/RUN_DIR/${BRIDGE_MSUB_JOBID}/${$}} |
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176 | |
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177 | #==================================================== |
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178 | #- HOST_MPIRUN_COMMAND |
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179 | typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="/usr/bin/time ccc_mprun -E-K1"} |
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180 | |
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181 | #==================================================== |
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182 | #- Max number of arguments passed to nco operator or demigration command |
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183 | UNIX_MAX_LIMIT=360 |
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184 | |
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185 | #==================================================== |
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186 | #- set PackDefault true on curie |
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187 | PackDefault=true |
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188 | |
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189 | #==================================================== |
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190 | #- Number of core per node (max number of OpenMP task) |
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191 | NUM_COREPERNODE=8 |
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192 | |
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193 | #==================================================== |
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194 | #- Default number of MPI task for IPSL coupled model |
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195 | #- required for backward compatibility |
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196 | #- |
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197 | DEFAULT_NUM_PROC_OCE=5 |
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198 | DEFAULT_NUM_PROC_CPL=1 |
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199 | (( DEFAULT_NUM_PROC_ATM = BATCH_NUM_PROC_TOT - DEFAULT_NUM_PROC_OCE - DEFAULT_NUM_PROC_CPL )) |
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200 | DEFAULT_NUM_PROC_TOTAL=${BATCH_NUM_PROC_TOT} |
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201 | |
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202 | #D-#================================================== |
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203 | #D-function IGCM_sys_ChangeArchive |
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204 | #D-* Purpose: if SpaceName=TEST everything is stored on SCRATCHDIR |
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205 | #D-* Examples: |
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206 | #D- |
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207 | function IGCM_sys_ChangeArchive { |
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208 | IGCM_debug_PushStack "IGCM_sys_ChangeArchive" |
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209 | |
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210 | R_OUT=${SCRATCHDIR}/IGCM_OUT |
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211 | R_FIG=${SCRATCHDIR}/IGCM_OUT |
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212 | |
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213 | IGCM_debug_Print 1 "R_OUT has been redefined = ${R_OUT}" |
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214 | IGCM_debug_Print 1 "R_FIG has been redefined = ${R_FIG}" |
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215 | |
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216 | IGCM_debug_PopStack "IGCM_sys_ChangeArchive" |
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217 | } |
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218 | |
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219 | #D-#================================================== |
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220 | #D-function IGCM_sys_RshMaster |
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221 | #D-* Purpose: Connection to frontend machine. |
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222 | #D-* Examples: |
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223 | #D- |
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224 | function IGCM_sys_RshMaster { |
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225 | IGCM_debug_PushStack "IGCM_sys_RshMaster" $@ |
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226 | /bin/ksh <<-EOF |
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227 | export libIGCM=${libIGCM} |
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228 | export DEBUG_debug=${DEBUG_debug} |
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229 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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230 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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231 | ${@} |
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232 | EOF |
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233 | if [ $? -gt 0 ] ; then |
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234 | echo "IGCM_sys_RshMaster : erreur." |
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235 | IGCM_debug_Exit "IGCM_sys_RshMaster" |
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236 | fi |
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237 | IGCM_debug_PopStack "IGCM_sys_RshMaster" |
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238 | } |
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239 | |
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240 | #D-#================================================== |
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241 | #D-function IGCM_sys_RshArchive |
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242 | #D-* Purpose: Archive rsh command |
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243 | #D-* Examples: |
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244 | #D- |
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245 | function IGCM_sys_RshArchive { |
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246 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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247 | /bin/ksh <<-EOF |
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248 | ${@} |
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249 | EOF |
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250 | status=$? |
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251 | if [ ${status} -gt 0 ] ; then |
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252 | IGCM_debug_Print 2 "IGCM_sys_RshArchive : command failed error code ${status}" |
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253 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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254 | fi |
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255 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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256 | } |
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257 | |
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258 | #D-#================================================== |
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259 | #D-function IGCM_sys_RshPost |
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260 | #D-* Purpose: Post-process rsh command |
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261 | #D-* Examples: |
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262 | #D- |
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263 | function IGCM_sys_RshPost { |
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264 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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265 | if ( $DEBUG_sys ) ; then |
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266 | echo "IGCM_sys_RshPost :" $@ |
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267 | fi |
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268 | # keep standard input (stdin) for the loop onto temporary file |
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269 | cat >/tmp/tmp_IGCM_sys_RshPost_$$_${LOGNAME} |
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270 | |
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271 | /bin/ksh </tmp/tmp_IGCM_sys_RshPost_$$_${LOGNAME} |
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272 | if [ $? -gt 0 ] ; then |
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273 | echo "IGCM_sys_RshPost : erreur." |
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274 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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275 | fi |
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276 | # delete temporary file |
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277 | \rm /tmp/tmp_IGCM_sys_RshPost_$$_${LOGNAME} |
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278 | |
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279 | # ============ FRONTEND END ============ # |
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280 | |
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281 | # ============ CESIUM START ============ # |
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282 | # typeset NB_ESSAI DELAI status i |
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283 | # if [ "X$( grep rebuild_from tmp_IGCM_sys_RshPost_$$ )" != "X" ] ; then |
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284 | # #little hack so that rebuild submission is done on titane not an cesium |
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285 | # |
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286 | # libIGCM_POST_sed=$( echo $libIGCM_POST | sed 's/\//\\\//g' ) |
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287 | # POST_DIR_sed=$( echo ${POST_DIR} | sed 's/\//\\\//g' ) |
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288 | # sed "s/IGCM_sys_QsubPost/IGCM_sys_Qsub/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt |
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289 | # sed "s/ rebuild_fromWorkdir/ ${libIGCM_POST_sed}\/rebuild_fromWorkdir.job/g" tmp.txt > tmp_IGCM_sys_RshPost_$$ |
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290 | # sed "s/ rebuild_fromArchive/ ${libIGCM_POST_sed}\/rebuild_fromArchive.job/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt |
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291 | # sed "s/Script_Post_Output=/Script_Output=${POST_DIR_sed}\//g" tmp.txt > tmp_IGCM_sys_RshPost_$$ |
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292 | # \mv tmp.txt tmp_IGCM_sys_RshPost_$$ |
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293 | # |
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294 | # echo cat tmp_IGCM_sys_RshPost_$$ AFTER |
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295 | # cat tmp_IGCM_sys_RshPost_$$ |
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296 | # |
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297 | # /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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298 | # if [ $? -gt 0 ] ; then |
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299 | # echo "IGCM_sys_RshPost : erreur." |
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300 | # IGCM_debug_Exit "IGCM_sys_RshPost" |
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301 | # fi |
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302 | # # delete temporary file |
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303 | # \rm tmp_IGCM_sys_RshPost_$$ |
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304 | # |
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305 | # else |
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306 | # # number of tentative |
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307 | # NB_ESSAI=10 |
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308 | # # time delay between tentative |
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309 | # DELAI=10 |
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310 | # i=0 |
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311 | # while [ $i -ne $NB_ESSAI ] ; do |
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312 | # ssh -t titane996 ssh cesium /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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313 | # status=$? |
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314 | # if [ ${status} -ne 0 ]; |
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315 | # then |
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316 | # sleep $DELAI |
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317 | # else |
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318 | # break |
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319 | # fi |
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320 | # let i=$i+1 |
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321 | # done |
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322 | # # delete temporary file |
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323 | # \rm tmp_IGCM_sys_RshPost_$$ |
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324 | # |
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325 | # if [ ${status} -gt 0 ] ; then |
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326 | # echo "IGCM_sys_RshPost : erreur." |
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327 | # IGCM_debug_Exit "IGCM_sys_RshPost" |
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328 | # fi |
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329 | # fi |
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330 | |
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331 | # ============ CESIUM END ============ # |
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332 | |
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333 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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334 | } |
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335 | |
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336 | #D-#================================================== |
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337 | #D-function IGCM_sys_SendMail |
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338 | #D-* Purpose: Send mail when simulation is over |
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339 | #D-* Examples: |
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340 | #D- |
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341 | function IGCM_sys_SendMail { |
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342 | IGCM_debug_PushStack "IGCM_sys_SendMail" $@ |
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343 | if ( $DEBUG_sys ) ; then |
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344 | echo "IGCM_sys_SendMail :" $@ |
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345 | fi |
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346 | |
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347 | if ( ${ExitFlag} ) ; then |
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348 | status=failed |
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349 | else |
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350 | status=completed |
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351 | fi |
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352 | |
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353 | cat << END_MAIL > job_end.mail |
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354 | Dear ${LOGIN}, |
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355 | |
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356 | Simulation ${config_UserChoices_JobName} is ${status} on supercomputer `hostname`. |
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357 | Job started : ${DateBegin} |
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358 | Job ended : ${DateEnd} |
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359 | Output files are available in ${R_SAVE} |
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360 | Files to be rebuild are temporarily available in ${REBUILD_DIR} |
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361 | Pre-packed files are temporarily available in ${R_BUFR} |
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362 | Script files, Script Outputs and Debug files (if necessary) are available in ${SUBMIT_DIR} |
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363 | END_MAIL |
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364 | |
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365 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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366 | mail -s "${config_UserChoices_JobName} ${status}" ${config_UserChoices_MailName} < job_end.mail |
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367 | elif [ -f ~/.forward ] ; then |
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368 | mail -s "${config_UserChoices_JobName} ${status}" $( cat ~/.forward ) < job_end.mail |
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369 | fi |
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370 | |
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371 | sleep 10 |
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372 | rm -f job_end.mail |
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373 | |
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374 | if [ $? -gt 0 ] ; then |
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375 | echo "IGCM_sys_SendMail : erreur." |
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376 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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377 | fi |
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378 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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379 | } |
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380 | |
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381 | #D-#================================================== |
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382 | #D-function IGCM_sys_Mkdir |
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383 | #D-* Purpose: Master locale mkdir command |
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384 | #D-* Examples: |
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385 | #D- |
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386 | function IGCM_sys_Mkdir { |
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387 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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388 | if ( $DEBUG_sys ) ; then |
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389 | echo "IGCM_sys_Mkdir :" $@ |
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390 | fi |
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391 | if [ ! -d ${1} ]; then |
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392 | \mkdir -p $1 |
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393 | if [ $? -gt 0 ] ; then |
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394 | echo "IGCM_sys_Mkdir : erreur." |
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395 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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396 | fi |
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397 | fi |
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398 | # vérification : |
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399 | if [ ! -d ${1} ] ; then |
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400 | echo "IGCM_sys_Mkdir : erreur." |
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401 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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402 | fi |
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403 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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404 | } |
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405 | |
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406 | #D-#================================================== |
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407 | #D-function IGCM_sys_MkdirArchive |
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408 | #D-* Purpose: Mkdir on Archive |
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409 | #D-* Examples: |
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410 | #D- |
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411 | function IGCM_sys_MkdirArchive { |
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412 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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413 | if ( $DEBUG_sys ) ; then |
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414 | echo "IGCM_sys_MkdirArchive :" $@ |
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415 | fi |
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416 | #- creation de repertoire sur le serveur fichier |
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417 | if [ ! -d ${1} ]; then |
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418 | \mkdir -p $1 |
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419 | status=$? |
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420 | |
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421 | if [ ${status} -gt 0 ] ; then |
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422 | IGCM_debug_Print 2 "IGCM_sys_MkdirArchive : mkdir failed error code ${status}" |
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423 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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424 | fi |
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425 | fi |
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426 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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427 | } |
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428 | |
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429 | #D-#================================================== |
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430 | #D-function IGCM_sys_MkdirWork |
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431 | #D-* Purpose: Mkdir on Work |
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432 | #D-* Examples: |
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433 | #D- |
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434 | function IGCM_sys_MkdirWork { |
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435 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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436 | if ( $DEBUG_sys ) ; then |
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437 | echo "IGCM_sys_MkdirWork :" $@ |
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438 | fi |
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439 | #- creation de repertoire sur le serveur fichier |
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440 | if [ ! -d ${1} ]; then |
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441 | \mkdir -p $1 |
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442 | if [ $? -gt 0 ] ; then |
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443 | echo "IGCM_sys_MkdirWork : erreur." |
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444 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
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445 | fi |
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446 | fi |
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447 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
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448 | } |
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449 | |
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450 | #D-#================================================== |
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451 | #D-function IGCM_sys_Cd |
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452 | #D-* Purpose: master cd command |
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453 | #D-* Examples: |
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454 | #D- |
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455 | function IGCM_sys_Cd { |
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456 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
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457 | if ( $DEBUG_sys ) ; then |
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458 | echo "IGCM_sys_Cd :" $@ |
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459 | fi |
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460 | \cd $1 |
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461 | if [ $? -gt 0 ] ; then |
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462 | echo "IGCM_sys_Cd : erreur." |
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463 | IGCM_debug_Exit "IGCM_sys_Cd" |
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464 | fi |
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465 | IGCM_debug_PopStack "IGCM_sys_Cd" |
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466 | } |
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467 | |
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468 | #D-#================================================== |
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469 | #D-function IGCM_sys_Chmod |
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470 | #D-* Purpose: Chmod |
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471 | #D-* Examples: |
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472 | #D- |
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473 | function IGCM_sys_Chmod { |
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474 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
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475 | if ( $DEBUG_sys ) ; then |
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476 | echo "IGCM_sys_Chmod :" $@ |
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477 | fi |
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478 | \chmod $@ |
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479 | if [ $? -gt 0 ] ; then |
---|
480 | echo "IGCM_sys_Chmod : erreur." |
---|
481 | IGCM_debug_Exit "IGCM_sys_Chmod" |
---|
482 | fi |
---|
483 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
---|
484 | } |
---|
485 | |
---|
486 | #D-#================================================== |
---|
487 | #D-function IGCM_sys_FileSize |
---|
488 | #D-* Purpose: Filesize |
---|
489 | #D-* Examples: |
---|
490 | #D- |
---|
491 | function IGCM_sys_FileSize { |
---|
492 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
---|
493 | |
---|
494 | typeset sizeF |
---|
495 | set +A sizeF -- $( ls -la ${1} ) |
---|
496 | if [ $? -gt 0 ] ; then |
---|
497 | IGCM_debug_Exit "IGCM_sys_FileSize" |
---|
498 | fi |
---|
499 | eval ${2}=${sizeF[4]} |
---|
500 | |
---|
501 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
---|
502 | } |
---|
503 | |
---|
504 | #D-#================================================== |
---|
505 | #D-function IGCM_sys_TestDir |
---|
506 | #D-* Purpose: Test Directory that must exists |
---|
507 | #D-* Examples: |
---|
508 | #D- |
---|
509 | function IGCM_sys_TestDir { |
---|
510 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
---|
511 | if ( $DEBUG_sys ) ; then |
---|
512 | echo "IGCM_sys_TestDir :" $@ |
---|
513 | fi |
---|
514 | typeset ExistFlag |
---|
515 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
516 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
---|
517 | |
---|
518 | return ${ExistFlag} |
---|
519 | } |
---|
520 | |
---|
521 | #D-#================================================== |
---|
522 | #D-function IGCM_sys_TestDirArchive |
---|
523 | #D-* Purpose: Test Directory that must exists on Archive |
---|
524 | #D-* Examples: |
---|
525 | #D- |
---|
526 | function IGCM_sys_TestDirArchive { |
---|
527 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
---|
528 | if ( $DEBUG_sys ) ; then |
---|
529 | echo "IGCM_sys_TestDirArchive :" $@ |
---|
530 | fi |
---|
531 | typeset ExistFlag |
---|
532 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
533 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
---|
534 | return ${ExistFlag} |
---|
535 | } |
---|
536 | |
---|
537 | #D-#================================================== |
---|
538 | #D-function IGCM_sys_IsFileArchived |
---|
539 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
540 | #D-* Examples: |
---|
541 | #D- |
---|
542 | function IGCM_sys_IsFileArchived { |
---|
543 | IGCM_debug_PushStack "IGCM_sys_IsFileArchived" $@ |
---|
544 | if ( $DEBUG_sys ) ; then |
---|
545 | echo "IGCM_sys_IsFileArchived :" $@ |
---|
546 | fi |
---|
547 | typeset IsArchivedFlag |
---|
548 | IsArchivedFlag=$( [ X$( echo $@ | grep ^\/ccc\/store ) != X ] && echo 0 || echo 1 ) |
---|
549 | IGCM_debug_PopStack "IGCM_sys_IsFileArchived" |
---|
550 | |
---|
551 | return ${IsArchivedFlag} |
---|
552 | } |
---|
553 | |
---|
554 | #D-#================================================== |
---|
555 | #D-function IGCM_sys_TestFileArchive |
---|
556 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
557 | #D-* Examples: |
---|
558 | #D- |
---|
559 | function IGCM_sys_TestFileArchive { |
---|
560 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
---|
561 | typeset ExistFlag |
---|
562 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
563 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
---|
564 | |
---|
565 | return ${ExistFlag} |
---|
566 | } |
---|
567 | |
---|
568 | #D-#================================================== |
---|
569 | #D-function IGCM_sys_TestFileBuffer |
---|
570 | #D-* Purpose: Test file that must NOT EXISTS on Buffer |
---|
571 | #D-* Examples: |
---|
572 | #D- |
---|
573 | function IGCM_sys_TestFileBuffer { |
---|
574 | IGCM_debug_PushStack "IGCM_sys_TestFileBuffer" $@ |
---|
575 | typeset ExistFlag |
---|
576 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
577 | IGCM_debug_PopStack "IGCM_sys_TestFileBuffer" |
---|
578 | |
---|
579 | return ${ExistFlag} |
---|
580 | } |
---|
581 | |
---|
582 | #D-#================================================== |
---|
583 | #D-function IGCM_sys_CountFileArchive |
---|
584 | #D-* Purpose: Count files on Archive filesystem |
---|
585 | #D-* Examples: |
---|
586 | #D- |
---|
587 | function IGCM_sys_CountFileArchive { |
---|
588 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
---|
589 | ls ${@} 2>/dev/null | wc -l |
---|
590 | if [ $? -gt 0 ] ; then |
---|
591 | echo "IGCM_sys_CountFileArchive : erreur." |
---|
592 | fi |
---|
593 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
---|
594 | } |
---|
595 | |
---|
596 | #D-#================================================== |
---|
597 | #D-function IGCM_sys_CountFileBuffer |
---|
598 | #D-* Purpose: Count files on Scratch filesystem |
---|
599 | #D-* Examples: |
---|
600 | #D- |
---|
601 | function IGCM_sys_CountFileBuffer { |
---|
602 | IGCM_debug_PushStack "IGCM_sys_CountFileBuffer" $@ |
---|
603 | ls ${@} 2>/dev/null | wc -l |
---|
604 | if [ $? -gt 0 ] ; then |
---|
605 | echo "IGCM_sys_CountFileBuffer : erreur." |
---|
606 | fi |
---|
607 | IGCM_debug_PopStack "IGCM_sys_CountFileBuffer" |
---|
608 | } |
---|
609 | |
---|
610 | #D-#================================================== |
---|
611 | #D-function IGCM_sys_Tree |
---|
612 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
---|
613 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
---|
614 | #D- |
---|
615 | function IGCM_sys_Tree { |
---|
616 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
---|
617 | if ( $DEBUG_sys ) ; then |
---|
618 | echo "IGCM_sys_Tree :" $@ |
---|
619 | fi |
---|
620 | |
---|
621 | \ls -lR ${@} |
---|
622 | |
---|
623 | IGCM_debug_PopStack "IGCM_sys_Tree" |
---|
624 | } |
---|
625 | |
---|
626 | #D-#================================================== |
---|
627 | #D-function IGCM_sys_Tar |
---|
628 | #D-* Purpose: master tar command |
---|
629 | #D-* Examples: |
---|
630 | #D- |
---|
631 | function IGCM_sys_Tar { |
---|
632 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
---|
633 | if ( $DEBUG_sys ) ; then |
---|
634 | echo "IGCM_sys_Tar :" $@ |
---|
635 | fi |
---|
636 | \tar cf $@ |
---|
637 | if [ $? -gt 0 ] ; then |
---|
638 | echo "IGCM_sys_Tar : erreur." |
---|
639 | IGCM_debug_Exit "IGCM_sys_Tar" |
---|
640 | fi |
---|
641 | IGCM_debug_PopStack "IGCM_sys_Tar" |
---|
642 | } |
---|
643 | |
---|
644 | #D-#================================================== |
---|
645 | #D-function IGCM_sys_UnTar |
---|
646 | #D-* Purpose: master un-tar command |
---|
647 | #D-* Examples: |
---|
648 | #D- |
---|
649 | function IGCM_sys_UnTar { |
---|
650 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
---|
651 | if ( $DEBUG_sys ) ; then |
---|
652 | echo "IGCM_sys_UnTar :" $@ |
---|
653 | fi |
---|
654 | \tar xvf $1 |
---|
655 | if [ $? -gt 0 ] ; then |
---|
656 | echo "IGCM_sys_UnTar : erreur." |
---|
657 | IGCM_debug_Exit "IGCM_sys_UnTar" |
---|
658 | fi |
---|
659 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
---|
660 | } |
---|
661 | |
---|
662 | #D-#================================================== |
---|
663 | #D-function IGCM_sys_Qsub |
---|
664 | #D-* Purpose: Qsub new job |
---|
665 | #D-* Examples: |
---|
666 | #D- |
---|
667 | function IGCM_sys_Qsub { |
---|
668 | IGCM_debug_PushStack "IGCM_sys_Qsub" $@ |
---|
669 | if ( $DEBUG_sys ) ; then |
---|
670 | echo "IGCM_sys_Qsub :" $@ |
---|
671 | fi |
---|
672 | typeset options status |
---|
673 | if [ ${config_UserChoices_JobName}.${CumulPeriod} = "." ] ; then |
---|
674 | options=" -o ${Script_Output} -e ${Script_Output}" |
---|
675 | else |
---|
676 | options=" -o ${Script_Output} -e ${Script_Output} -r ${config_UserChoices_JobName}.${CumulPeriod}" |
---|
677 | fi |
---|
678 | |
---|
679 | /usr/bin/ccc_msub ${options} < $1 |
---|
680 | status=$? |
---|
681 | if [ ${status} -gt 0 ] ; then |
---|
682 | IGCM_debug_Print 2 "IGCM_sys_Qsub ${options} $1 : error code ${status}" |
---|
683 | IGCM_debug_Exit "IGCM_sys_Qsub" |
---|
684 | fi |
---|
685 | IGCM_debug_PopStack "IGCM_sys_Qsub" |
---|
686 | } |
---|
687 | |
---|
688 | #D-#================================================== |
---|
689 | #D-function IGCM_sys_QsubPost |
---|
690 | #D-* Purpose: Qsub new job on scalaire |
---|
691 | #D-* Examples: |
---|
692 | #D- |
---|
693 | function IGCM_sys_QsubPost { |
---|
694 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
695 | if ( $DEBUG_sys ) ; then |
---|
696 | echo "IGCM_sys_QsubPost :" $@ |
---|
697 | fi |
---|
698 | typeset status |
---|
699 | MY_PROJECT=$(echo ${BRIDGE_MSUB_PROJECT} | cut -d@ -f1 ) |
---|
700 | /usr/bin/ccc_msub -Q normal -A ${MY_PROJECT} -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.out ${libIGCM_POST}/$1.job |
---|
701 | status=$? |
---|
702 | if [ ${status} -gt 0 ] ; then |
---|
703 | IGCM_debug_Print 2 "IGCM_sys_QsubPost $1 : error code ${status}" |
---|
704 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
705 | fi |
---|
706 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
707 | } |
---|
708 | |
---|
709 | #D-************************* |
---|
710 | #D- File transfer functions |
---|
711 | #D-************************* |
---|
712 | #D- |
---|
713 | |
---|
714 | #D-#================================================== |
---|
715 | #D-function IGCM_sys_Rsync_out |
---|
716 | #D-* Purpose: treat return val of rsync |
---|
717 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
718 | #D- Error values and explanations can depend on your system version. |
---|
719 | function IGCM_sys_Rsync_out { |
---|
720 | status=$1 |
---|
721 | if [ ! $status ] ; then |
---|
722 | echo "rsync error !" |
---|
723 | fi |
---|
724 | |
---|
725 | if [ $MYLANG = "fr" ]; then |
---|
726 | case $status in |
---|
727 | 0) return ;; |
---|
728 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
729 | echo "Erreur de syntaxe ou d'utilisation." |
---|
730 | return;; |
---|
731 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
732 | echo "Incompatibilité de protocole." |
---|
733 | return;; |
---|
734 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
735 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
736 | echo "répertoires" |
---|
737 | return;; |
---|
738 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
739 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
740 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
741 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
742 | echo "pas par le serveur a été spécifiée." |
---|
743 | return;; |
---|
744 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
745 | echo "Erreur dans le socket d'entrée sortie" |
---|
746 | return;; |
---|
747 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
748 | echo "Erreur d'entrée sortie fichier" |
---|
749 | return;; |
---|
750 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
751 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
752 | return;; |
---|
753 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
754 | echo "Erreur avec les diagnostics du programme" |
---|
755 | return;; |
---|
756 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
757 | echo "Erreur dans le code IPC" |
---|
758 | return;; |
---|
759 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
760 | echo "SIGUSR1 ou SIGINT reçu" |
---|
761 | return;; |
---|
762 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
763 | echo "Une erreur retournée par waitpid()" |
---|
764 | return;; |
---|
765 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
766 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
767 | return;; |
---|
768 | 23) echo "" |
---|
769 | echo "Erreur fichier inexistant" |
---|
770 | return;; |
---|
771 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
772 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
773 | return;; |
---|
774 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $status |
---|
775 | return;; |
---|
776 | esac |
---|
777 | elif [ $MYLANG = "en" ] ; then |
---|
778 | case $status in |
---|
779 | 0) return;; |
---|
780 | 1) echo "rsync error : Syntax or usage error " |
---|
781 | return;; |
---|
782 | 2) echo "rsync error : Protocol incompatibility " |
---|
783 | return;; |
---|
784 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
785 | return;; |
---|
786 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
787 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
788 | echo "them; or an option was specified that is supported by the client and" |
---|
789 | echo "not by the server." |
---|
790 | return;; |
---|
791 | 5) echo "rsync error : Error starting client-server protocol" |
---|
792 | return;; |
---|
793 | 10) echo "rsync error : Error in socket I/O " |
---|
794 | return;; |
---|
795 | 11) echo "rsync error : Error in file I/O " |
---|
796 | return;; |
---|
797 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
798 | return;; |
---|
799 | 13) echo "rsync error : Errors with program diagnostics " |
---|
800 | return;; |
---|
801 | 14) echo "rsync error : Error in IPC code " |
---|
802 | return;; |
---|
803 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
804 | return;; |
---|
805 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
806 | return;; |
---|
807 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
808 | return;; |
---|
809 | 23) echo "rsync error : Partial transfer due to error" |
---|
810 | return;; |
---|
811 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
812 | return;; |
---|
813 | 30) echo "rsync error : Timeout in data send/receive " |
---|
814 | return;; |
---|
815 | *) echo "rsync error : return code of rsync unknown :" $status |
---|
816 | return;; |
---|
817 | esac |
---|
818 | else |
---|
819 | echo "unknown language $MYLANG." |
---|
820 | return |
---|
821 | fi |
---|
822 | } |
---|
823 | |
---|
824 | #D-#================================================== |
---|
825 | #D-function IGCM_sys_Miror_libIGCM |
---|
826 | #D-* Purpose: Mirror libIGCM PATH and lib to frontend |
---|
827 | #D-* Examples: |
---|
828 | #D- |
---|
829 | function IGCM_sys_Mirror_libIGCM { |
---|
830 | IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM" |
---|
831 | if ( $DEBUG_sys ) ; then |
---|
832 | echo "IGCM_sys_Mirror_libIGCM" |
---|
833 | fi |
---|
834 | |
---|
835 | typeset status |
---|
836 | |
---|
837 | mkdir -p ${HOME}/MIRROR/${PATHlibIGCM} |
---|
838 | |
---|
839 | echo ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} > out_rsync 2>&1 |
---|
840 | ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} >> out_rsync 2>&1 |
---|
841 | status=$? |
---|
842 | |
---|
843 | if [ ${status} -gt 0 ] ; then |
---|
844 | echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on frontend." |
---|
845 | cat out_rsync |
---|
846 | fi |
---|
847 | IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM" |
---|
848 | } |
---|
849 | |
---|
850 | #D-#================================================== |
---|
851 | #D-function IGCM_sys_Cp |
---|
852 | #D-* Purpose: generic cp |
---|
853 | #D-* Examples: |
---|
854 | #D- |
---|
855 | function IGCM_sys_Cp { |
---|
856 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
857 | if ( $DEBUG_sys ) ; then |
---|
858 | echo "IGCM_sys_Cp :" $@ |
---|
859 | fi |
---|
860 | |
---|
861 | typeset status |
---|
862 | |
---|
863 | echo cp $@ > out_rsync 2>&1 |
---|
864 | \cp $@ >> out_rsync 2>&1 |
---|
865 | status=$? |
---|
866 | |
---|
867 | if [ ${status} -gt 0 ] ; then |
---|
868 | echo "IGCM_sys_Cp : error code ${status}" |
---|
869 | cat out_rsync |
---|
870 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
871 | else |
---|
872 | \rm out_rsync |
---|
873 | fi |
---|
874 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
875 | } |
---|
876 | |
---|
877 | #D-#================================================== |
---|
878 | #D-function IGCM_sys_Rm |
---|
879 | #D-* Purpose: generic rm |
---|
880 | #D-* Examples: |
---|
881 | #D- |
---|
882 | function IGCM_sys_Rm { |
---|
883 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
884 | if ( $DEBUG_sys ) ; then |
---|
885 | echo "IGCM_sys_Rm :" $@ |
---|
886 | fi |
---|
887 | |
---|
888 | typeset status |
---|
889 | |
---|
890 | echo rm $@ > out_rsync 2>&1 |
---|
891 | \rm $@ >> out_rsync 2>&1 |
---|
892 | status=$? |
---|
893 | |
---|
894 | if [ ${status} -gt 0 ] ; then |
---|
895 | echo "IGCM_sys_Rm : error code ${status}" |
---|
896 | cat out_rsync |
---|
897 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
898 | else |
---|
899 | \rm out_rsync |
---|
900 | fi |
---|
901 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
902 | } |
---|
903 | |
---|
904 | #D-#================================================== |
---|
905 | #D-function IGCM_sys_RmRunDir |
---|
906 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
907 | #D- scheduler will do the job) |
---|
908 | #D-* Examples: |
---|
909 | #D- |
---|
910 | function IGCM_sys_RmRunDir { |
---|
911 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
912 | if ( $DEBUG_sys ) ; then |
---|
913 | echo "IGCM_sys_RmRunDir :" $@ |
---|
914 | fi |
---|
915 | |
---|
916 | typeset status |
---|
917 | |
---|
918 | echo rm $@ > out_rsync 2>&1 |
---|
919 | \rm $@ >> out_rsync 2>&1 |
---|
920 | status=$? |
---|
921 | |
---|
922 | if [ ${status} -gt 0 ] ; then |
---|
923 | echo "IGCM_sys_RmRunDir : rm error code is ${status}." |
---|
924 | cat out_rsync |
---|
925 | IGCM_debug_Exit "IGCM_sys_RmRunDir" |
---|
926 | else |
---|
927 | \rm out_rsync |
---|
928 | fi |
---|
929 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
930 | } |
---|
931 | |
---|
932 | #D-#================================================== |
---|
933 | #D-function IGCM_sys_Mv |
---|
934 | #D-* Purpose: generic move |
---|
935 | #D-* Examples: |
---|
936 | #D- |
---|
937 | function IGCM_sys_Mv { |
---|
938 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
939 | if ( $DEBUG_sys ) ; then |
---|
940 | echo "IGCM_sys_Mv :" $@ |
---|
941 | fi |
---|
942 | |
---|
943 | if [ $DRYRUN = 0 ]; then |
---|
944 | |
---|
945 | typeset status |
---|
946 | |
---|
947 | echo mv $@ > out_rsync 2>&1 |
---|
948 | \mv $@ >> out_rsync 2>&1 |
---|
949 | status=$? |
---|
950 | |
---|
951 | if [ ${status} -gt 0 ] ; then |
---|
952 | echo "IGCM_sys_Mv : error code ${status}" |
---|
953 | cat out_rsync |
---|
954 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
955 | else |
---|
956 | \rm out_rsync |
---|
957 | fi |
---|
958 | fi |
---|
959 | |
---|
960 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
961 | } |
---|
962 | |
---|
963 | #D-#================================================== |
---|
964 | #D-function IGCM_sys_Put_Dir |
---|
965 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
966 | #D-* Examples: |
---|
967 | #D- |
---|
968 | function IGCM_sys_Put_Dir { |
---|
969 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
970 | if ( $DEBUG_sys ) ; then |
---|
971 | echo "IGCM_sys_Put_Dir :" $@ |
---|
972 | fi |
---|
973 | if [ $DRYRUN = 0 ]; then |
---|
974 | if [ ! -d ${1} ] ; then |
---|
975 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
976 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
977 | return |
---|
978 | fi |
---|
979 | |
---|
980 | typeset status |
---|
981 | |
---|
982 | # Only if we use rsync |
---|
983 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
984 | # |
---|
985 | #USUAL WAY |
---|
986 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
987 | status=$? |
---|
988 | |
---|
989 | if [ ${status} -gt 0 ] ; then |
---|
990 | IGCM_debug_Print 2 "IGCM_sys_Put_Dir : cp failed error code ${status}" |
---|
991 | cat out_rsync |
---|
992 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
993 | else |
---|
994 | \rm out_rsync |
---|
995 | fi |
---|
996 | fi |
---|
997 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
998 | } |
---|
999 | |
---|
1000 | #D-#================================================== |
---|
1001 | #D-function IGCM_sys_Get_Dir |
---|
1002 | #D-* Purpose: Copy a complete directory from ${ARCHIVE} |
---|
1003 | #D-* Examples: |
---|
1004 | #D- |
---|
1005 | function IGCM_sys_Get_Dir { |
---|
1006 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
1007 | if ( $DEBUG_sys ) ; then |
---|
1008 | echo "IGCM_sys_Get_Dir :" $@ |
---|
1009 | fi |
---|
1010 | if [ $DRYRUN = 0 ]; then |
---|
1011 | # if [ ! -d ${1} ] ; then |
---|
1012 | # echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
1013 | # IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
1014 | # return |
---|
1015 | # fi |
---|
1016 | |
---|
1017 | typeset NB_ESSAI DELAI status i |
---|
1018 | # number of tentative |
---|
1019 | NB_ESSAI=3 |
---|
1020 | # time delay between tentative |
---|
1021 | DELAI=2 |
---|
1022 | |
---|
1023 | # Only if we use rsync |
---|
1024 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
1025 | # |
---|
1026 | # USUAL WAY |
---|
1027 | # add 'ccc_hsm get' (to demigrate all offline files) to reduce time of this command : |
---|
1028 | ccc_hsm get -r $1 |
---|
1029 | |
---|
1030 | i=0 |
---|
1031 | while [ $i -lt $NB_ESSAI ] ; do |
---|
1032 | \cp -ur $1 $2 >> out_rsync 2>&1 |
---|
1033 | status=$? |
---|
1034 | if [ ${status} -gt 0 ] ; then |
---|
1035 | IGCM_debug_Print 2 "IGCM_sys_Get_Dir : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
1036 | IGCM_debug_Print 2 "IGCM_sys_Get_Dir : sleep ${DELAI} seconds and try again." |
---|
1037 | sleep $DELAI |
---|
1038 | else |
---|
1039 | break |
---|
1040 | fi |
---|
1041 | (( i = i + 1 )) |
---|
1042 | done |
---|
1043 | |
---|
1044 | if [ ${status} -gt 0 ] ; then |
---|
1045 | echo "IGCM_sys_Get_Dir : error." |
---|
1046 | cat out_rsync |
---|
1047 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
1048 | else |
---|
1049 | \rm out_rsync |
---|
1050 | fi |
---|
1051 | fi |
---|
1052 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
1053 | } |
---|
1054 | |
---|
1055 | #D-#================================================== |
---|
1056 | #D-function IGCM_sys_Get_Master |
---|
1057 | #D-* Purpose: Copy a complete directory from MASTER filesystem |
---|
1058 | #D-* Examples: |
---|
1059 | #D- |
---|
1060 | function IGCM_sys_Get_Master { |
---|
1061 | IGCM_debug_PushStack "IGCM_sys_Get_Master" $@ |
---|
1062 | if ( $DEBUG_sys ) ; then |
---|
1063 | echo "IGCM_sys_Get_Master :" $@ |
---|
1064 | fi |
---|
1065 | if [ $DRYRUN = 0 ]; then |
---|
1066 | if ( [ ! -d ${1} ] && [ ! -f ${1} ] ) ; then |
---|
1067 | echo "WARNING : IGCM_sys_Get_Master ${1} DOES NOT EXIST ." |
---|
1068 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
1069 | return |
---|
1070 | fi |
---|
1071 | |
---|
1072 | typeset NB_ESSAI DELAI status i |
---|
1073 | # number of tentative |
---|
1074 | NB_ESSAI=3 |
---|
1075 | # time delay between tentative |
---|
1076 | DELAI=2 |
---|
1077 | |
---|
1078 | i=0 |
---|
1079 | while [ $i -lt $NB_ESSAI ] ; do |
---|
1080 | \cp -urL $1 $2 > out_rsync 2>&1 |
---|
1081 | status=$? |
---|
1082 | if [ ${status} -gt 0 ]; then |
---|
1083 | IGCM_debug_Print 2 "IGCM_sys_Get_Master : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
1084 | IGCM_debug_Print 2 "IGCM_sys_Get_Master : sleep ${DELAI} seconds and try again." |
---|
1085 | sleep $DELAI |
---|
1086 | else |
---|
1087 | break |
---|
1088 | fi |
---|
1089 | (( i = i + 1 )) |
---|
1090 | done |
---|
1091 | |
---|
1092 | if [ ${status} -gt 0 ] ; then |
---|
1093 | echo "IGCM_sys_Get_Master : error." |
---|
1094 | cat out_rsync |
---|
1095 | IGCM_debug_Exit "IGCM_sys_Get_Master" |
---|
1096 | else |
---|
1097 | \rm out_rsync |
---|
1098 | fi |
---|
1099 | fi |
---|
1100 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
1101 | } |
---|
1102 | |
---|
1103 | #==================================================== |
---|
1104 | #- Call IGCM_sys_Mirror_libIGCM now ! |
---|
1105 | if ( $MirrorlibIGCM ) ; then |
---|
1106 | IGCM_sys_Mirror_libIGCM |
---|
1107 | fi |
---|
1108 | |
---|
1109 | #D-#================================================== |
---|
1110 | #D-function IGCM_sys_Put_Rest |
---|
1111 | #D-* Purpose: Put computied restarts on ${ARCHIVE}. |
---|
1112 | #D- File and target directory must exist. |
---|
1113 | #D-* Examples: |
---|
1114 | #D- |
---|
1115 | function IGCM_sys_Put_Rest { |
---|
1116 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
1117 | if ( $DEBUG_sys ) ; then |
---|
1118 | echo "IGCM_sys_Put_Rest :" $@ |
---|
1119 | fi |
---|
1120 | if [ $DRYRUN = 0 ]; then |
---|
1121 | if [ ! -f ${1} ] ; then |
---|
1122 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
1123 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
1124 | fi |
---|
1125 | |
---|
1126 | typeset status |
---|
1127 | # |
---|
1128 | # USUAL WAY |
---|
1129 | \cp $1 $2 > out_rsync 2>&1 |
---|
1130 | status=$? |
---|
1131 | |
---|
1132 | # #RSYNC WITH NETWORK SSH CALL |
---|
1133 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
1134 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
1135 | |
---|
1136 | # #RSYNC WITH NFS USE |
---|
1137 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
1138 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
1139 | |
---|
1140 | # status=$? |
---|
1141 | # IGCM_sys_Rsync_out $status |
---|
1142 | |
---|
1143 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
1144 | # (( status=status+$? )) |
---|
1145 | |
---|
1146 | if [ ${status} -gt 0 ] ; then |
---|
1147 | echo "IGCM_sys_Put_Rest : cp failed error code ${status}" |
---|
1148 | [ -f ${1} ] && ls -l ${1} |
---|
1149 | [ -f ${2} ] && ls -l ${2} |
---|
1150 | [ -f ${2}/${1} ] && ls -l ${2}/${1} |
---|
1151 | cat out_rsync |
---|
1152 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
1153 | else |
---|
1154 | |
---|
1155 | if [ X${JobType} = XRUN ] ; then |
---|
1156 | [ -f ${2} ] && IGCM_sys_Chmod 444 ${2} |
---|
1157 | [ -f ${2}/${1} ] && IGCM_sys_Chmod 444 ${2}/${1} |
---|
1158 | fi |
---|
1159 | |
---|
1160 | \rm out_rsync |
---|
1161 | fi |
---|
1162 | fi |
---|
1163 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
1164 | } |
---|
1165 | |
---|
1166 | #D-#================================================== |
---|
1167 | #D-function IGCM_sys_PutBuffer_Rest |
---|
1168 | #D-* Purpose: Put computied restarts on ${SCRATCHDIR}. |
---|
1169 | #D- File and target directory must exist. |
---|
1170 | #D-* Examples: |
---|
1171 | #D- |
---|
1172 | function IGCM_sys_PutBuffer_Rest { |
---|
1173 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Rest" $@ |
---|
1174 | if ( $DEBUG_sys ) ; then |
---|
1175 | echo "IGCM_sys_PutBuffer_Rest :" $@ |
---|
1176 | fi |
---|
1177 | if [ $DRYRUN = 0 ]; then |
---|
1178 | if [ ! -f ${1} ] ; then |
---|
1179 | echo "ERROR : IGCM_sys_PutBuffer_Rest ${1} DOES NOT EXIST ." |
---|
1180 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
1181 | fi |
---|
1182 | |
---|
1183 | typeset status |
---|
1184 | # |
---|
1185 | # USUAL WAY |
---|
1186 | \cp $1 $2 > out_rsync 2>&1 |
---|
1187 | status=$? |
---|
1188 | |
---|
1189 | if [ ${status} -gt 0 ] ; then |
---|
1190 | echo "IGCM_sys_PutBuffer_Rest : error code ${status}" |
---|
1191 | [ -f ${2} ] && ls -l ${2} |
---|
1192 | [ -f ${2}/${1} ] && ls -l ${2}/${1} |
---|
1193 | cat out_rsync |
---|
1194 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
1195 | else |
---|
1196 | |
---|
1197 | if [ X${JobType} = XRUN ] ; then |
---|
1198 | [ -f ${2} ] && IGCM_sys_Chmod 444 ${2} |
---|
1199 | [ -f ${2}/${1} ] && IGCM_sys_Chmod 444 ${2}/${1} |
---|
1200 | fi |
---|
1201 | |
---|
1202 | \rm out_rsync |
---|
1203 | fi |
---|
1204 | fi |
---|
1205 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Rest" |
---|
1206 | } |
---|
1207 | |
---|
1208 | #D-#================================================== |
---|
1209 | #D-function IGCM_sys_PrepareTaredRestart |
---|
1210 | #D-* Purpose: Prepare tared restart to be access by computing job. Identity here. |
---|
1211 | #D-* Examples: |
---|
1212 | #D- |
---|
1213 | function IGCM_sys_PrepareTaredRestart { |
---|
1214 | IGCM_debug_PushStack "IGCM_sys_PrepareTaredRestart" $@ |
---|
1215 | if [ $DRYRUN = 0 ]; then |
---|
1216 | [ ! -f $( basename $1 ) ] && DEBUG_sys=false IGCM_sys_Get $1 . |
---|
1217 | fi |
---|
1218 | echo $( basename $1 ) |
---|
1219 | IGCM_debug_PopStack "IGCM_sys_PrepareTaredRestart" |
---|
1220 | } |
---|
1221 | |
---|
1222 | #D-#================================================== |
---|
1223 | #D-function IGCM_sys_Put_Out |
---|
1224 | #D-* Purpose: Copy a file on ${ARCHIVE} after having chmod it in readonly |
---|
1225 | #D-* Examples: |
---|
1226 | #D- |
---|
1227 | function IGCM_sys_Put_Out { |
---|
1228 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
1229 | if ( $DEBUG_sys ) ; then |
---|
1230 | echo "IGCM_sys_Put_Out :" $@ |
---|
1231 | fi |
---|
1232 | |
---|
1233 | typeset NB_ESSAI DELAI status i exist skip |
---|
1234 | |
---|
1235 | # number of tentative |
---|
1236 | NB_ESSAI=3 |
---|
1237 | # time delay between tentative |
---|
1238 | DELAI=2 |
---|
1239 | |
---|
1240 | if [ $DRYRUN = 0 ]; then |
---|
1241 | if [ ! -f ${1} ] ; then |
---|
1242 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
1243 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
1244 | return 1 |
---|
1245 | fi |
---|
1246 | # |
---|
1247 | IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
1248 | # |
---|
1249 | |
---|
1250 | #===================================================== |
---|
1251 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
1252 | #===================================================== |
---|
1253 | |
---|
1254 | #echo ${2} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
1255 | #if [ $? -eq 0 ] ; then |
---|
1256 | # typeset WORKPATH FILEPATH |
---|
1257 | # WORKPATH=$( dirname $2 | sed -e "s|${R_OUT}|${R_BUF}|" ) |
---|
1258 | # IGCM_sys_MkdirWork ${WORKPATH} |
---|
1259 | # FILEPATH=${WORKPATH}/$( basename $2 ) |
---|
1260 | # # |
---|
1261 | # IGCM_sys_Cp ${1} ${FILEPATH} |
---|
1262 | #fi |
---|
1263 | |
---|
1264 | exist=false |
---|
1265 | skip=false |
---|
1266 | if [ -f $2 ] ; then |
---|
1267 | IGCM_debug_Print 1 "$2 already exist" |
---|
1268 | #dmget $2 |
---|
1269 | ccc_hsm get $2 |
---|
1270 | exist=true |
---|
1271 | if [ "X$( diff $1 $2 )" = X ] ; then |
---|
1272 | IGCM_debug_Print 2 "$1 and $2 are the same file, we skip the copy" |
---|
1273 | skip=true |
---|
1274 | else |
---|
1275 | IGCM_debug_Print 2 "$1 and $2 are not the same file, we force the copy" |
---|
1276 | skip=false |
---|
1277 | fi |
---|
1278 | fi |
---|
1279 | # |
---|
1280 | if ( [ X${exist} = Xtrue ] && [ X${skip} = Xfalse ] ) ; then |
---|
1281 | IGCM_sys_Chmod u+w $2 |
---|
1282 | fi |
---|
1283 | |
---|
1284 | if [ X${skip} = Xfalse ] ; then |
---|
1285 | i=0 |
---|
1286 | while [ $i -lt $NB_ESSAI ] ; do |
---|
1287 | # USUAL WAY |
---|
1288 | \cp $1 $2 > out_rsync 2>&1 |
---|
1289 | status=$? |
---|
1290 | if [ ${status} -gt 0 ]; then |
---|
1291 | IGCM_debug_Print 2 "IGCM_sys_Put_Out : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
1292 | IGCM_debug_Print 2 "IGCM_sys_Put_Out : sleep ${DELAI} seconds and try again." |
---|
1293 | [ -f ${1} ] && ls -l ${1} |
---|
1294 | [ -f ${2} ] && ls -l ${2} |
---|
1295 | [ -f ${2}/${1} ] && ls -l ${2}/${1} |
---|
1296 | sleep $DELAI |
---|
1297 | else |
---|
1298 | break |
---|
1299 | fi |
---|
1300 | (( i = i + 1 )) |
---|
1301 | done |
---|
1302 | fi |
---|
1303 | |
---|
1304 | # #RSYNC WITH NETWORK SSH CALL |
---|
1305 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
1306 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
1307 | |
---|
1308 | # #RSYNC WITH NFS USE |
---|
1309 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
1310 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
1311 | |
---|
1312 | # status=$? |
---|
1313 | # IGCM_sys_Rsync_out $status |
---|
1314 | |
---|
1315 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
1316 | # (( status=status+$? )) |
---|
1317 | |
---|
1318 | if [ ${status} -gt 0 ] ; then |
---|
1319 | echo "IGCM_sys_Put_Out : error." |
---|
1320 | [ -f ${1} ] && ls -l ${1} |
---|
1321 | [ -f ${2} ] && ls -l ${2} |
---|
1322 | [ -f ${2}/${1} ] && ls -l ${2}/${1} |
---|
1323 | cat out_rsync |
---|
1324 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
1325 | else |
---|
1326 | |
---|
1327 | if [ X${JobType} = XRUN ] ; then |
---|
1328 | if [ X${3} = X ] ; then |
---|
1329 | [ -f ${2} ] && IGCM_sys_Chmod 444 ${2} |
---|
1330 | [ -f ${2}/${1} ] && IGCM_sys_Chmod 444 ${2}/${1} |
---|
1331 | fi |
---|
1332 | fi |
---|
1333 | |
---|
1334 | \rm out_rsync |
---|
1335 | fi |
---|
1336 | fi |
---|
1337 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
1338 | return 0 |
---|
1339 | } |
---|
1340 | |
---|
1341 | #D-#================================================== |
---|
1342 | #D-function IGCM_sys_PutBuffer_Out |
---|
1343 | #D-* Purpose: Copy a file on ${SCRATCHDIR} after having chmod it in readonly |
---|
1344 | #D-* Examples: |
---|
1345 | #D- |
---|
1346 | function IGCM_sys_PutBuffer_Out { |
---|
1347 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Out" $@ |
---|
1348 | if ( $DEBUG_sys ) ; then |
---|
1349 | echo "IGCM_sys_PutBuffer_Out :" $@ |
---|
1350 | fi |
---|
1351 | |
---|
1352 | typeset NB_ESSAI DELAI status i exist skip |
---|
1353 | |
---|
1354 | # number of tentative |
---|
1355 | NB_ESSAI=3 |
---|
1356 | # time delay between tentative |
---|
1357 | DELAI=2 |
---|
1358 | |
---|
1359 | if [ $DRYRUN = 0 ]; then |
---|
1360 | if [ ! -f ${1} ] ; then |
---|
1361 | echo "WARNING : IGCM_sys_PutBuffer_Out ${1} DOES NOT EXIST ." |
---|
1362 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
1363 | return 1 |
---|
1364 | fi |
---|
1365 | # |
---|
1366 | IGCM_sys_Mkdir $( dirname $2 ) |
---|
1367 | # |
---|
1368 | |
---|
1369 | exist=false |
---|
1370 | skip=false |
---|
1371 | if [ -f $2 ] ; then |
---|
1372 | IGCM_debug_Print 1 "$2 already exist" |
---|
1373 | exist=true |
---|
1374 | if [ "X$( diff $1 $2 )" = X ] ; then |
---|
1375 | IGCM_debug_Print 2 "$1 and $2 are the same file, we skip the copy" |
---|
1376 | status=0 |
---|
1377 | skip=true |
---|
1378 | else |
---|
1379 | IGCM_debug_Print 2 "$1 and $2 are not the same file, we force the copy" |
---|
1380 | skip=false |
---|
1381 | fi |
---|
1382 | fi |
---|
1383 | # |
---|
1384 | if ( [ X${exist} = Xtrue ] && [ X${skip} = Xfalse ] ) ; then |
---|
1385 | IGCM_sys_Chmod u+w $2 |
---|
1386 | fi |
---|
1387 | |
---|
1388 | if [ X${skip} = Xfalse ] ; then |
---|
1389 | i=0 |
---|
1390 | while [ $i -lt $NB_ESSAI ] ; do |
---|
1391 | # USUAL WAY |
---|
1392 | \cp $1 $2 > out_rsync 2>&1 |
---|
1393 | status=$? |
---|
1394 | if [ ${status} -gt 0 ]; then |
---|
1395 | IGCM_debug_Print 2 "IGCM_sys_PutBuffer_Out : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
1396 | IGCM_debug_Print 2 "IGCM_sys_PutBuffer_Out : sleep ${DELAI} seconds and try again." |
---|
1397 | [ -f ${2} ] && ls -l ${2} |
---|
1398 | [ -f ${2}/${1} ] && ls -l ${2}/${1} |
---|
1399 | sleep $DELAI |
---|
1400 | else |
---|
1401 | break |
---|
1402 | fi |
---|
1403 | (( i = i + 1 )) |
---|
1404 | done |
---|
1405 | fi |
---|
1406 | |
---|
1407 | if [ ${status} -gt 0 ] ; then |
---|
1408 | echo "IGCM_sys_PutBuffer_Out : error." |
---|
1409 | [ -f ${2} ] && ls -l ${2} |
---|
1410 | [ -f ${2}/${1} ] && ls -l ${2}/${1} |
---|
1411 | cat out_rsync |
---|
1412 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Out" |
---|
1413 | else |
---|
1414 | |
---|
1415 | if [ X${JobType} = XRUN ] ; then |
---|
1416 | if [ X${3} = X ] ; then |
---|
1417 | [ -f ${2} ] && IGCM_sys_Chmod 444 ${2} |
---|
1418 | [ -f ${2}/${1} ] && IGCM_sys_Chmod 444 ${2}/${1} |
---|
1419 | fi |
---|
1420 | fi |
---|
1421 | |
---|
1422 | \rm out_rsync |
---|
1423 | fi |
---|
1424 | fi |
---|
1425 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
1426 | return 0 |
---|
1427 | } |
---|
1428 | |
---|
1429 | #D-#================================================== |
---|
1430 | #D-function IGCM_sys_Get |
---|
1431 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
1432 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
1433 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
1434 | function IGCM_sys_Get { |
---|
1435 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
1436 | |
---|
1437 | typeset DEST dm_liste target file_work |
---|
1438 | typeset NB_ESSAI DELAI status i |
---|
1439 | |
---|
1440 | if ( $DEBUG_sys ) ; then |
---|
1441 | echo "IGCM_sys_Get :" $@ |
---|
1442 | fi |
---|
1443 | |
---|
1444 | # number of tentative |
---|
1445 | NB_ESSAI=3 |
---|
1446 | # time delay between tentative |
---|
1447 | DELAI=2 |
---|
1448 | |
---|
1449 | if [ $DRYRUN -le 2 ]; then |
---|
1450 | if [ X${1} = X'/l' ] ; then |
---|
1451 | # test if the first file is present in the old computation : |
---|
1452 | eval set +A dm_liste \${${2}} |
---|
1453 | else |
---|
1454 | eval set +A dm_liste ${1} |
---|
1455 | fi |
---|
1456 | eval DEST=\${${#}} |
---|
1457 | |
---|
1458 | #===================================================== |
---|
1459 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
1460 | #===================================================== |
---|
1461 | |
---|
1462 | # Is it an R_OUT file (not R_IN) ? |
---|
1463 | #echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
1464 | #if [ $? -eq 0 ] ; then |
---|
1465 | # # Yes ? then we try to get it in SCRATCHDIR |
---|
1466 | # set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_BUF}|g" ) |
---|
1467 | # if [ -f ${file_work[0]} ] ; then |
---|
1468 | # IGCM_sys_Cp ${file_work[*]} ${DEST} |
---|
1469 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
1470 | # return |
---|
1471 | # fi |
---|
1472 | #fi |
---|
1473 | |
---|
1474 | ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1 |
---|
1475 | status=$? |
---|
1476 | if [ ${status} -gt 0 ] ; then |
---|
1477 | echo "WARNING IGCM_sys_Get : error code ${status}" |
---|
1478 | cat out_rsync |
---|
1479 | echo "WARNING IGCM_sys_Get : will stop later if the cp fails." |
---|
1480 | fi |
---|
1481 | |
---|
1482 | #if [ ${status} -gt 0 ] ; then |
---|
1483 | # if [ ! "X$( grep "Lost dmusrcmd connection" out_rsync )" = "X" ] ; then |
---|
1484 | # cat out_rsync |
---|
1485 | # echo "WARNING IGCM_sys_Get : Lost dmusrcmd connection : " |
---|
1486 | # sleep 30 |
---|
1487 | # echo "We try another time" |
---|
1488 | ## dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
1489 | # ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1 |
---|
1490 | # status=$? |
---|
1491 | # if [ ${status} -gt 0 ] ; then |
---|
1492 | # echo "ERROR IGCM_sys_Get : again demigration error :" |
---|
1493 | # cat out_rsync |
---|
1494 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
1495 | # fi |
---|
1496 | # else |
---|
1497 | # echo "ERROR IGCM_sys_Get : demigration error :" |
---|
1498 | # cat out_rsync |
---|
1499 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
1500 | # fi |
---|
1501 | #fi |
---|
1502 | |
---|
1503 | # #RSYNC WITH NETWORK SSH CALL |
---|
1504 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
1505 | # ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
1506 | |
---|
1507 | # #RSYNC WITH NFS USE |
---|
1508 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
1509 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
1510 | |
---|
1511 | # status=$? |
---|
1512 | # IGCM_sys_Rsync_out $status |
---|
1513 | |
---|
1514 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
1515 | # (( status=status+$? )) |
---|
1516 | |
---|
1517 | #USUAL WAY |
---|
1518 | if [ X${1} = X'/l' ] ; then |
---|
1519 | for target in ${dm_liste[*]} ; do |
---|
1520 | local_file=$( basename ${target} ) |
---|
1521 | # test if the target file is present before the loop |
---|
1522 | IGCM_sys_TestFileArchive ${target} |
---|
1523 | status=$? |
---|
1524 | if [ ${status} -gt 0 ] ; then |
---|
1525 | echo "IGCM_sys_Get, ERROR : regular file ${target} DOES NOT EXIST ." |
---|
1526 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
1527 | else |
---|
1528 | i=0 |
---|
1529 | while [ $i -lt $NB_ESSAI ] ; do |
---|
1530 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
1531 | status=$? |
---|
1532 | if [ ${status} -gt 0 ]; then |
---|
1533 | IGCM_debug_Print 2 "IGCM_sys_Get : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
1534 | IGCM_debug_Print 2 "IGCM_sys_Get : sleep ${DELAI} seconds and try again." |
---|
1535 | sleep $DELAI |
---|
1536 | else |
---|
1537 | break |
---|
1538 | fi |
---|
1539 | (( i = i + 1 )) |
---|
1540 | done |
---|
1541 | if [ ${status} -gt 0 ] ; then |
---|
1542 | echo "IGCM_sys_Get : error" |
---|
1543 | cat out_rsync |
---|
1544 | \rm out_rsync |
---|
1545 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
1546 | else |
---|
1547 | \rm out_rsync |
---|
1548 | fi |
---|
1549 | fi |
---|
1550 | done |
---|
1551 | else |
---|
1552 | i=0 |
---|
1553 | while [ $i -lt $NB_ESSAI ] ; do |
---|
1554 | \cp ${dm_liste} ${DEST} >> out_rsync 2>&1 |
---|
1555 | status=$? |
---|
1556 | if [ ${status} -gt 0 ]; then |
---|
1557 | IGCM_debug_Print 2 "IGCM_sys_Get : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
1558 | IGCM_debug_Print 2 "IGCM_sys_Get : sleep ${DELAI} seconds and try again." |
---|
1559 | sleep $DELAI |
---|
1560 | else |
---|
1561 | break |
---|
1562 | fi |
---|
1563 | (( i = i + 1 )) |
---|
1564 | done |
---|
1565 | if [ ${status} -gt 0 ] ; then |
---|
1566 | echo "IGCM_sys_Get : error" |
---|
1567 | cat out_rsync |
---|
1568 | \rm out_rsync |
---|
1569 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
1570 | else |
---|
1571 | \rm out_rsync |
---|
1572 | fi |
---|
1573 | fi |
---|
1574 | fi |
---|
1575 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
1576 | } |
---|
1577 | |
---|
1578 | #D-#================================================== |
---|
1579 | #D-function IGCM_sys_GetBuffer |
---|
1580 | #D-* Purpose: Get a file from ${SCRATCHDIR} |
---|
1581 | #D-* Examples: IGCM_sys_GetBuffer myfile /destpath/myfile_with_PREFIX |
---|
1582 | #D- IGCM_sys_GetBuffer /l Array_contain_myfiles /destpath/ |
---|
1583 | function IGCM_sys_GetBuffer { |
---|
1584 | IGCM_debug_PushStack "IGCM_sys_GetBuffer" $@ |
---|
1585 | |
---|
1586 | typeset DEST buf_liste target file_work |
---|
1587 | typeset NB_ESSAI DELAI status i |
---|
1588 | |
---|
1589 | if ( $DEBUG_sys ) ; then |
---|
1590 | echo "IGCM_sys_GetBuffer :" $@ |
---|
1591 | fi |
---|
1592 | |
---|
1593 | # number of tentative |
---|
1594 | NB_ESSAI=3 |
---|
1595 | # time delay between tentative |
---|
1596 | DELAI=2 |
---|
1597 | |
---|
1598 | if [ $DRYRUN -le 2 ]; then |
---|
1599 | if [ X${1} = X'/l' ] ; then |
---|
1600 | # test if the first file is present in the old computation : |
---|
1601 | eval set +A buf_liste \${${2}} |
---|
1602 | else |
---|
1603 | eval set +A buf_liste ${1} |
---|
1604 | fi |
---|
1605 | eval DEST=\${${#}} |
---|
1606 | |
---|
1607 | #USUAL WAY |
---|
1608 | if [ X${1} = X'/l' ] ; then |
---|
1609 | for target in ${buf_liste[*]} ; do |
---|
1610 | local_file=$( basename ${target} ) |
---|
1611 | i=0 |
---|
1612 | while [ $i -lt $NB_ESSAI ] ; do |
---|
1613 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
1614 | status=$? |
---|
1615 | if [ ${status} -gt 0 ]; then |
---|
1616 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
1617 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : sleep ${DELAI} seconds and try again." |
---|
1618 | sleep $DELAI |
---|
1619 | else |
---|
1620 | break |
---|
1621 | fi |
---|
1622 | (( i = i + 1 )) |
---|
1623 | done |
---|
1624 | if [ ${status} -gt 0 ] ; then |
---|
1625 | echo "IGCM_sys_Get : error" |
---|
1626 | cat out_rsync |
---|
1627 | \rm out_rsync |
---|
1628 | IGCM_debug_Exit "IGCM_sys_GetBuffer" |
---|
1629 | else |
---|
1630 | \rm out_rsync |
---|
1631 | fi |
---|
1632 | done |
---|
1633 | else |
---|
1634 | i=0 |
---|
1635 | while [ $i -lt $NB_ESSAI ] ; do |
---|
1636 | \cp ${buf_liste} ${DEST} >> out_rsync 2>&1 |
---|
1637 | status=$? |
---|
1638 | if [ ${status} -gt 0 ]; then |
---|
1639 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
1640 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : sleep ${DELAI} seconds and try again." |
---|
1641 | sleep $DELAI |
---|
1642 | else |
---|
1643 | break |
---|
1644 | fi |
---|
1645 | (( i = i + 1 )) |
---|
1646 | done |
---|
1647 | if [ ${status} -gt 0 ] ; then |
---|
1648 | echo "IGCM_sys_Get : error" |
---|
1649 | cat out_rsync |
---|
1650 | \rm out_rsync |
---|
1651 | IGCM_debug_Exit "IGCM_sys_GetBuffer" |
---|
1652 | else |
---|
1653 | \rm out_rsync |
---|
1654 | fi |
---|
1655 | fi |
---|
1656 | fi |
---|
1657 | IGCM_debug_PopStack "IGCM_sys_GetBuffer" |
---|
1658 | } |
---|
1659 | |
---|
1660 | #D-#================================================== |
---|
1661 | #D-function IGCM_sys_GetDate_FichWork |
---|
1662 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
1663 | #D-* Examples: |
---|
1664 | #D- |
---|
1665 | function IGCM_sys_GetDate_FichWork { |
---|
1666 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
1667 | if ( $DEBUG_sys ) ; then |
---|
1668 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
1669 | fi |
---|
1670 | typeset dateF |
---|
1671 | set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
1672 | eval ${2}=${dateF[5]} |
---|
1673 | |
---|
1674 | # donne la date filesys d'un fichier sur la machine work |
---|
1675 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
1676 | } |
---|
1677 | |
---|
1678 | #D-#================================================== |
---|
1679 | #D-function IGCM_sys_GetDate_FichArchive |
---|
1680 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
1681 | #D-* Examples: |
---|
1682 | #D- |
---|
1683 | function IGCM_sys_GetDate_FichArchive { |
---|
1684 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
1685 | if ( $DEBUG_sys ) ; then |
---|
1686 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
1687 | fi |
---|
1688 | typeset dateF |
---|
1689 | set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
1690 | eval ${2}=${dateF[5]} |
---|
1691 | |
---|
1692 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
1693 | } |
---|
1694 | |
---|
1695 | #D-#================================================== |
---|
1696 | #D-function IGCM_sys_GetDate_Monitoring |
---|
1697 | #D-* Purpose: get the last year for which the monitoring has been computed |
---|
1698 | #D-* Examples: |
---|
1699 | #D- |
---|
1700 | function IGCM_sys_GetDate_Monitoring { |
---|
1701 | IGCM_debug_PushStack "IGCM_sys_GetDate_Monitoring" $@ |
---|
1702 | if ( $DEBUG_sys ) ; then |
---|
1703 | echo "IGCM_sys_GetDate_Monitoring :" $@ |
---|
1704 | fi |
---|
1705 | |
---|
1706 | eval ${2}=$( cdo showyear ${1} 2> /dev/null | gawk '{ print $NF }' ) |
---|
1707 | |
---|
1708 | IGCM_debug_PopStack "IGCM_sys_GetDate_Monitoring" |
---|
1709 | } |
---|
1710 | |
---|
1711 | #D-#================================================== |
---|
1712 | #D-function IGCM_sys_Dods_Rm |
---|
1713 | #D-* Purpose: DO NOTHING ! Put ${ARCHIVE} files on DODS internet protocole. |
---|
1714 | #D-* Examples: |
---|
1715 | #D- |
---|
1716 | function IGCM_sys_Dods_Rm { |
---|
1717 | if ( $DEBUG_sys ) ; then |
---|
1718 | echo "IGCM_sys_Dods_Rm :" $@ |
---|
1719 | fi |
---|
1720 | typeset status |
---|
1721 | if [ $DRYRUN = 0 ]; then |
---|
1722 | |
---|
1723 | # if [ ! -d /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} ] ; then |
---|
1724 | # echo "WARNING : IGCM_sys_Dods_Rm /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} DOES NOT EXIST ." |
---|
1725 | # echo "Nothing has been done." |
---|
1726 | # return |
---|
1727 | # fi |
---|
1728 | |
---|
1729 | /ccc/cont003/home/dsm/p86ipsl/bin/dods_rm public/${LOGIN}/${R_DODS}/${1} # > out_dods_rm 2>&1 |
---|
1730 | status=$? |
---|
1731 | |
---|
1732 | # if [ ${status} -gt 0 ] ; then |
---|
1733 | # echo "IGCM_sys_Dods_Rm : error." |
---|
1734 | # cat out_dods_rm |
---|
1735 | # IGCM_debug_Exit "IGCM_sys_Dods_Rm" |
---|
1736 | # else |
---|
1737 | # rm out_dods_rm |
---|
1738 | # fi |
---|
1739 | |
---|
1740 | fi |
---|
1741 | return $status |
---|
1742 | } |
---|
1743 | |
---|
1744 | #D-#================================================== |
---|
1745 | #D-function IGCM_sys_Dods_Cp |
---|
1746 | #D-* Purpose: Copy $(ARCHIVE) files on DODS internet protocole. |
---|
1747 | #D-* Examples: |
---|
1748 | #D- |
---|
1749 | function IGCM_sys_Dods_Cp { |
---|
1750 | if ( $DEBUG_sys ) ; then |
---|
1751 | echo "IGCM_sys_Dods_Cp :" $@ |
---|
1752 | fi |
---|
1753 | typeset status |
---|
1754 | if [ $DRYRUN = 0 ]; then |
---|
1755 | |
---|
1756 | # if [ ! -d ${R_SAVE}/${1} ] ; then |
---|
1757 | # echo "WARNING : IGCM_sys_Dods_Cp ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
1758 | # echo "Nothing has been done." |
---|
1759 | # return |
---|
1760 | # fi |
---|
1761 | |
---|
1762 | /ccc/cont003/home/dsm/p86ipsl/bin/dods_cp ${1} public/${LOGIN}/${R_DODS} # > out_dods_cp 2>&1 |
---|
1763 | status=$? |
---|
1764 | |
---|
1765 | # if [ ${status} -gt 0 ] ; then |
---|
1766 | # echo "IGCM_sys_Dods_Cp : error." |
---|
1767 | # cat out_dods_cp |
---|
1768 | # IGCM_debug_Exit "IGCM_sys_Dods_Cp" |
---|
1769 | # else |
---|
1770 | # rm out_dods_cp |
---|
1771 | # fi |
---|
1772 | |
---|
1773 | fi |
---|
1774 | return $status |
---|
1775 | } |
---|
1776 | |
---|
1777 | #D-#================================================== |
---|
1778 | #D-function IGCM_sys_Put_Dods |
---|
1779 | #D-* Purpose: Put $(ARCHIVE) files on DODS internet protocole. |
---|
1780 | #D-* Examples: |
---|
1781 | #D- |
---|
1782 | function IGCM_sys_Put_Dods { |
---|
1783 | IGCM_debug_PushStack "IGCM_sys_Put_Dods" $@ |
---|
1784 | if ( $DEBUG_sys ) ; then |
---|
1785 | echo "IGCM_sys_Put_Dods :" $@ |
---|
1786 | fi |
---|
1787 | #set -vx |
---|
1788 | typeset status |
---|
1789 | if [ $DRYRUN = 0 ]; then |
---|
1790 | if ( [ ! -d ${R_SAVE}/${1} ] && [ ! -d ${R_FIGR}/${1} ] ) ; then |
---|
1791 | echo "WARNING IGCM_sys_Put_Dods : None of the following directories exist. Exactly one should." |
---|
1792 | echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} DOES NOT EXIST." |
---|
1793 | echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} DOES NOT EXIST." |
---|
1794 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
1795 | return |
---|
1796 | fi |
---|
1797 | |
---|
1798 | if ( [ -d ${R_SAVE}/${1} ] && [ -d ${R_FIGR}/${1} ] ) ; then |
---|
1799 | echo "WARNING IGCM_sys_Put_Dods : Both of the following directories exist. Exactly one should." |
---|
1800 | echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} EXISTS." |
---|
1801 | echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} EXISTS." |
---|
1802 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
1803 | return |
---|
1804 | fi |
---|
1805 | # |
---|
1806 | if [ -d ${R_SAVE}/${1} ] ; then |
---|
1807 | cd ${R_SAVE} |
---|
1808 | elif [ -d ${R_FIGR}/${1} ] ; then |
---|
1809 | cd ${R_FIGR} |
---|
1810 | fi |
---|
1811 | |
---|
1812 | IGCM_sys_Dods_Rm ${1} |
---|
1813 | IGCM_sys_Dods_Cp ${1} |
---|
1814 | status=0 |
---|
1815 | |
---|
1816 | if [ ${status} -gt 0 ] ; then |
---|
1817 | echo "IGCM_sys_Put_Dods : error." |
---|
1818 | IGCM_debug_Exit "IGCM_sys_Put_Dods" |
---|
1819 | fi |
---|
1820 | fi |
---|
1821 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
1822 | } |
---|
1823 | |
---|
1824 | ############################################################## |
---|
1825 | # REBUILD OPERATOR |
---|
1826 | |
---|
1827 | #D-#================================================== |
---|
1828 | #D-function IGCM_sys_rebuild |
---|
1829 | #D-* Purpose: rebuild parallel files |
---|
1830 | #D-* Examples: |
---|
1831 | #D- |
---|
1832 | function IGCM_sys_rebuild { |
---|
1833 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
1834 | if ( $DEBUG_sys ) ; then |
---|
1835 | echo "IGCM_sys_rebuild :" $@ |
---|
1836 | fi |
---|
1837 | |
---|
1838 | typeset NB_ESSAI DELAI status i firstArg |
---|
1839 | # number of tentative |
---|
1840 | NB_ESSAI=3 |
---|
1841 | # time delay between tentative |
---|
1842 | DELAI=2 |
---|
1843 | |
---|
1844 | i=0 |
---|
1845 | while [ $i -lt $NB_ESSAI ] ; do |
---|
1846 | ~p86ipsl/CESIUM/bin/rebuild -f -o $@ > out_rsync 2>&1 |
---|
1847 | status=$? |
---|
1848 | if [ ${status} -gt 0 ] ; then |
---|
1849 | IGCM_debug_Print 2 "IGCM_sys_rebuild : error code ${status}" |
---|
1850 | cat out_rsync |
---|
1851 | \rm out_rsync |
---|
1852 | IGCM_debug_Print 2 "IGCM_sys_rebuild : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
1853 | firstArg=${1} |
---|
1854 | \rm ${firstArg} |
---|
1855 | sleep $DELAI |
---|
1856 | else |
---|
1857 | \rm out_rsync |
---|
1858 | break |
---|
1859 | fi |
---|
1860 | (( i = i + 1 )) |
---|
1861 | done |
---|
1862 | |
---|
1863 | if [ ${status} -gt 0 ] ; then |
---|
1864 | echo "IGCM_sys_rebuild : rebuild error code is ${status}" |
---|
1865 | IGCM_debug_Exit "rebuild" |
---|
1866 | fi |
---|
1867 | |
---|
1868 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
1869 | } |
---|
1870 | |
---|
1871 | #D-#================================================== |
---|
1872 | #D-function IGCM_sys_rebuild_station |
---|
1873 | #D-* Purpose: rebuild parallel files describing station |
---|
1874 | #D-* Examples: |
---|
1875 | #D- |
---|
1876 | function IGCM_sys_rebuild_station { |
---|
1877 | IGCM_debug_PushStack "IGCM_sys_rebuild_station" -- $@ |
---|
1878 | typeset i list_opt file_in file_out prefix_invert list_invert |
---|
1879 | if ( $DEBUG_sys ) ; then |
---|
1880 | echo "IGCM_sys_rebuild_station :" $@ |
---|
1881 | fi |
---|
1882 | list_opt=$@ |
---|
1883 | |
---|
1884 | # Invert Axis : t,x -> x,t |
---|
1885 | # t,pres,x -> x,t,pres |
---|
1886 | # So that we can concatenate along x |
---|
1887 | i=0 |
---|
1888 | for file_in in ${list_opt} ; do |
---|
1889 | (( i = i + 1)) |
---|
1890 | [ ${i} = 1 ] && file_out=${file_in} && continue |
---|
1891 | prefix_invert=$( basename ${file_in} .nc ) |
---|
1892 | IGCM_sys_ncpdq -a x,time_counter -a x,time_counter,presnivs ${file_in} ${prefix_invert}_xt.nc |
---|
1893 | list_invert[${#list_invert[*]}]=${prefix_invert}_xt.nc |
---|
1894 | done |
---|
1895 | |
---|
1896 | # Concatenate |
---|
1897 | IGCM_sys_ncrcat ${list_invert[*]} histstn_xt.nc |
---|
1898 | |
---|
1899 | # Re-ivert file |
---|
1900 | IGCM_sys_ncpdq -a time_counter,x -a time_counter,presnivs,x histstn_xt.nc ${file_out} |
---|
1901 | |
---|
1902 | # Station re-ordering is too expansive to be run within libICGM |
---|
1903 | # This is due to (ncpdq - nrcat - ncpdq) I/O sequence. |
---|
1904 | # This re-ordering must be done "in memory" by the cmorization process |
---|
1905 | # Anyway this is the best sequence using (ncpdq - nrcat - ncpdq) |
---|
1906 | # BEGIN reordering |
---|
1907 | |
---|
1908 | # Only LMDZ text output contains the exact ordering of the station. |
---|
1909 | # We isolate this in the code below: |
---|
1910 | # 0 38 -157.5000000000000 70.98591549295774 |
---|
1911 | # 0 54 27.49999999999999 67.18309859154928 |
---|
1912 | # 0 56 -62.50000000000001 82.39436619718309 |
---|
1913 | # 0 79 12.49999999999999 78.59154929577466 |
---|
1914 | # 0 116 -165.0000000000000 76.05633802816901 |
---|
1915 | # 0 117 130.0000000000000 70.98591549295774 |
---|
1916 | # 0 118 110.0000000000000 87.46478873239437 |
---|
1917 | # 1 40 4.999999999999995 51.97183098591550 |
---|
1918 | # typeset iStation iProc list_opt file_in file_out prefix_invert |
---|
1919 | # typeset -Z4 j4 |
---|
1920 | # typeset -Z3 j3 |
---|
1921 | |
---|
1922 | # unset list_opt |
---|
1923 | # set +A list_opt $@ |
---|
1924 | |
---|
1925 | # Filename after rebuild |
---|
1926 | # file_out=${list_opt[0]} |
---|
1927 | # Prefix of output files |
---|
1928 | # prefix_invert=$( basename ${file_out} .nc ) |
---|
1929 | # Number of procs |
---|
1930 | # num_proc=$( grep -i mpi_size ${PREFIX}_${Exe_Output} | wc -l ) |
---|
1931 | |
---|
1932 | # iProc=0 |
---|
1933 | # while [ ${iProc} -lt ${num_proc} ] ; do |
---|
1934 | # Array containing Station as a number |
---|
1935 | # unset proc_stn |
---|
1936 | # set +A proc_stn $( grep "iophy_mpi rank ip lon lat $iProc" ${PREFIX}_${Exe_Output} | sed -e "s/iophy_mpi rank ip lon lat //g" | awk ' {print $2}' ) |
---|
1937 | # Number of stations produced by processor proc |
---|
1938 | # stationLast=${#proc_stn[*]} |
---|
1939 | # Proc number on 4 digits |
---|
1940 | # j4=${iProc} |
---|
1941 | # Init |
---|
1942 | # iStation=0 |
---|
1943 | # while [ ${iStation} -lt ${stationLast} ] ; do |
---|
1944 | # Station number on 3 digits |
---|
1945 | # j3=${proc_stn[${iStation}]} |
---|
1946 | # Extract station |
---|
1947 | # Invert Axis : t,x -> x,t |
---|
1948 | # t,pres,x -> x,t,pres |
---|
1949 | # So that we can concatenate along x |
---|
1950 | # IGCM_sys_ncpdq -a x,time_counter -a x,time_counter,presnivs -d x,$iStation,$iStation ${prefix_invert}_${j4}.nc ${prefix_invert}_stn_${j3}.nc |
---|
1951 | # (( iStation = iStation + 1 )) |
---|
1952 | # done |
---|
1953 | # (( iProc = iProc + 1 )) |
---|
1954 | # done |
---|
1955 | |
---|
1956 | # Concatenate all station along x |
---|
1957 | # IGCM_sys_ncrcat ${prefix_invert}_stn_???.nc ${prefix_invert}_xt.nc |
---|
1958 | |
---|
1959 | # Re-invert file |
---|
1960 | # IGCM_sys_ncpdq -a time_counter,x -a time_counter,presnivs,x ${prefix_invert}_xt.nc ${file_out} |
---|
1961 | |
---|
1962 | # END reordering |
---|
1963 | |
---|
1964 | IGCM_debug_PopStack "IGCM_sys_rebuild_station" |
---|
1965 | } |
---|
1966 | |
---|
1967 | ############################################################ |
---|
1968 | # Activate Running Environnment Variables |
---|
1969 | |
---|
1970 | #D-#================================================== |
---|
1971 | #D-function IGCM_sys_desactiv_variables |
---|
1972 | #D-* Purpose: set environement variables prior to execution |
---|
1973 | #D-* Examples: |
---|
1974 | #D- |
---|
1975 | function IGCM_sys_activ_variables { |
---|
1976 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
1977 | if ( $DEBUG_sys ) ; then |
---|
1978 | echo "IGCM_sys_activ_variables" |
---|
1979 | fi |
---|
1980 | |
---|
1981 | # -------------------------------------------------------------------- |
---|
1982 | #D- MPI specifications |
---|
1983 | # -------------------------------------------------------------------- |
---|
1984 | |
---|
1985 | # -------------------------------------------------------------------- |
---|
1986 | #D- Other specifications |
---|
1987 | # -------------------------------------------------------------------- |
---|
1988 | |
---|
1989 | ulimit -s unlimited |
---|
1990 | |
---|
1991 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
1992 | } |
---|
1993 | |
---|
1994 | ############################################################ |
---|
1995 | # Desactivate Running Environnment Variables |
---|
1996 | |
---|
1997 | #D-#================================================== |
---|
1998 | #D-function IGCM_sys_desactiv_variables |
---|
1999 | #D-* Purpose: unset environement variables after execution |
---|
2000 | #D-* Examples: |
---|
2001 | #D- |
---|
2002 | function IGCM_sys_desactiv_variables { |
---|
2003 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
2004 | if ( $DEBUG_sys ) ; then |
---|
2005 | echo "IGCM_sys_desactiv_variables" |
---|
2006 | fi |
---|
2007 | # -------------------------------------------------------------------- |
---|
2008 | #D- MPI specifications |
---|
2009 | # -------------------------------------------------------------------- |
---|
2010 | |
---|
2011 | # -------------------------------------------------------------------- |
---|
2012 | #D- Other specifications |
---|
2013 | # -------------------------------------------------------------------- |
---|
2014 | |
---|
2015 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
2016 | } |
---|
2017 | |
---|
2018 | ############################################################ |
---|
2019 | # Build MPI/OMP scripts run file (dummy function) |
---|
2020 | |
---|
2021 | #D-#================================================== |
---|
2022 | #D-function IGCM_sys_build_run_file |
---|
2023 | #D-* Purpose: build run file (deprecated) |
---|
2024 | #D-* Examples: |
---|
2025 | #D- |
---|
2026 | function IGCM_sys_build_run_file { |
---|
2027 | |
---|
2028 | IGCM_debug_Print 3 " dummy function : IGCM_sys_build_run_file " |
---|
2029 | |
---|
2030 | } |
---|
2031 | |
---|
2032 | ############################################################ |
---|
2033 | # Build MPI/OMP scripts |
---|
2034 | |
---|
2035 | #D-#================================================== |
---|
2036 | #D-function IGCM_sys_build_execution_scripts |
---|
2037 | #D-* Purpose: build execution scripts to be launch by ${HOST_MPIRUN_COMMAND} |
---|
2038 | #D-* Examples: |
---|
2039 | #D- |
---|
2040 | function IGCM_sys_build_execution_scripts |
---|
2041 | { |
---|
2042 | IGCM_debug_PushStack "IGCM_sys_build_execution_scripts" $@ |
---|
2043 | if ( $DEBUG_sys ) ; then |
---|
2044 | echo "IGCM_sys_build_execution_scripts " $@ |
---|
2045 | fi |
---|
2046 | |
---|
2047 | EXECUTION=${HOST_MPIRUN_COMMAND} |
---|
2048 | |
---|
2049 | if ( ${OK_PARA_MPMD} ) ; then |
---|
2050 | |
---|
2051 | if [ -f run_file ] ; then |
---|
2052 | IGCM_sys_Rm -f run_file |
---|
2053 | fi |
---|
2054 | touch run_file |
---|
2055 | |
---|
2056 | # run_file construction |
---|
2057 | |
---|
2058 | # Then first loop on the components for the coupler ie oasis |
---|
2059 | |
---|
2060 | ## the coupler ie oasis must be the first one |
---|
2061 | for comp in ${config_ListOfComponents[*]} ; do |
---|
2062 | |
---|
2063 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
2064 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
2065 | |
---|
2066 | # for CPL component only |
---|
2067 | if [ "X${comp}" = "XCPL" ] ; then |
---|
2068 | |
---|
2069 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
2070 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
2071 | echo "${comp_proc_mpi_loc} ./${ExeNameOut}" >> run_file |
---|
2072 | fi |
---|
2073 | done |
---|
2074 | |
---|
2075 | # Then second loop on the components |
---|
2076 | |
---|
2077 | for comp in ${config_ListOfComponents[*]} ; do |
---|
2078 | |
---|
2079 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
2080 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
2081 | |
---|
2082 | # Only if we really have an executable for the component and not the coupler ie oasis: |
---|
2083 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${comp}" != "XCPL" ] ) ; then |
---|
2084 | |
---|
2085 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
2086 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
2087 | echo "${comp_proc_mpi_loc} ./${ExeNameOut}" >> run_file |
---|
2088 | fi |
---|
2089 | done |
---|
2090 | |
---|
2091 | EXECUTION="${HOST_MPIRUN_COMMAND} -f ./run_file" |
---|
2092 | |
---|
2093 | IGCM_sys_Chmod u+x run_file |
---|
2094 | if ( $DEBUG_sys ) ; then |
---|
2095 | echo "run_file contains : " |
---|
2096 | cat run_file |
---|
2097 | fi |
---|
2098 | |
---|
2099 | else # Only one executable. launch it. |
---|
2100 | |
---|
2101 | for comp in ${config_ListOfComponents[*]} ; do |
---|
2102 | |
---|
2103 | # Only if we really have an executable for the component : |
---|
2104 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
2105 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${ExeNameOut}" != "Xinca.dat" ] ) ; then |
---|
2106 | |
---|
2107 | echo "#!/bin/ksh" > script_${ExeNameOut}.ksh |
---|
2108 | echo "" >> script_${ExeNameOut}.ksh |
---|
2109 | IGCM_sys_Chmod u+x script_${ExeNameOut}.ksh |
---|
2110 | |
---|
2111 | if ( ${OK_PARA_OMP} ) ; then |
---|
2112 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
2113 | echo "" >> script_${ExeNameOut}.ksh |
---|
2114 | echo "export KMP_STACKSIZE=3g" >> script_${ExeNameOut}.ksh |
---|
2115 | echo "export KMP_LIBRARY=turnaround" >> script_${ExeNameOut}.ksh |
---|
2116 | echo "export MKL_SERIAL=YES" >> script_${ExeNameOut}.ksh |
---|
2117 | echo "OMP_NUM_THREADS=${comp_proc_omp_loc}" >> script_${ExeNameOut}.ksh |
---|
2118 | fi |
---|
2119 | |
---|
2120 | if ( ${OK_PARA_MPI} ) ; then |
---|
2121 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
2122 | # Default : ccc_mprun used if nb_proc gt 1 |
---|
2123 | # to have out/err per process on different files |
---|
2124 | # echo "./${ExeNameOut} > out_${ExeNameOut}.out.\${SLURM_PROCID} 2>out_${ExeNameOut}.err.\${SLURM_PROCID}" >> script_${ExeNameOut}.ksh |
---|
2125 | echo "./${ExeNameOut}" >> script_${ExeNameOut}.ksh |
---|
2126 | EXECUTION="${HOST_MPIRUN_COMMAND} -n ${comp_proc_mpi_loc} ./script_${ExeNameOut}.ksh" |
---|
2127 | else |
---|
2128 | # Default : ccc_mprun is NOT used if nb_proc eq 1 |
---|
2129 | # to have out/err per process on different files |
---|
2130 | # echo "./${ExeNameOut} > out_${ExeNameOut}.out 2>out_${ExeNameOut}.err" >> script_${ExeNameOut}.ksh |
---|
2131 | echo "./${ExeNameOut}" >> script_${ExeNameOut}.ksh |
---|
2132 | EXECUTION="/usr/bin/time ./script_${ExeNameOut}.ksh" |
---|
2133 | fi |
---|
2134 | |
---|
2135 | IGCM_debug_Print 1 "sys Curie : script_${ExeNameOut}.ksh contains" |
---|
2136 | cat script_${ExeNameOut}.ksh |
---|
2137 | |
---|
2138 | fi |
---|
2139 | |
---|
2140 | done |
---|
2141 | |
---|
2142 | fi |
---|
2143 | |
---|
2144 | IGCM_debug_Print 1 "sys Curie : execution command is " |
---|
2145 | IGCM_debug_Print 1 "$EXECUTION" |
---|
2146 | |
---|
2147 | IGCM_debug_PopStack "IGCM_sys_build_execution_scripts" |
---|
2148 | } |
---|
2149 | |
---|
2150 | ############################################################ |
---|
2151 | # Check of space available on temporary filesytems. |
---|
2152 | |
---|
2153 | #D-#================================================== |
---|
2154 | #D-function IGCM_sys_check_quota |
---|
2155 | #D-* Purpose: check user quota. Stop the simulation if quota above 90% |
---|
2156 | #D-* Examples: |
---|
2157 | #D- |
---|
2158 | function IGCM_sys_check_quota { |
---|
2159 | IGCM_debug_PushStack "IGCM_sys_check_quota" |
---|
2160 | if ( $DEBUG_sys ) ; then |
---|
2161 | echo "IGCM_sys_check_quota" |
---|
2162 | fi |
---|
2163 | # Limit of quota (in %) |
---|
2164 | limit_quota=90 |
---|
2165 | |
---|
2166 | # Check of the volume |
---|
2167 | volume_quota=$(ccc_quota | grep ' scratch' | awk '{print $2}') |
---|
2168 | volume_avail=$(ccc_quota | grep ' scratch' | awk '{print $3}') |
---|
2169 | |
---|
2170 | if ( [ ! X${volume_quota} = X ] && [ ! ${volume_quota} = "-" ] ) ; then |
---|
2171 | |
---|
2172 | unit_avail=${volume_avail: -1} |
---|
2173 | unit_quota=${volume_quota: -1} |
---|
2174 | |
---|
2175 | if [ "${unit_quota}" = "*" ] ; then |
---|
2176 | IGCM_debug_Print 1 "Please, check your quota of volume on scratch" |
---|
2177 | IGCM_debug_Print 1 "More than 100% of your quota is used" |
---|
2178 | IGCM_debug_Print 1 "Use the ccc_quota command to check" |
---|
2179 | IGCM_debug_Print 1 "You must have more than 10% available to run" |
---|
2180 | IGCM_debug_Exit "Not enough space to run ! STOP HERE" |
---|
2181 | IGCM_debug_Verif_Exit |
---|
2182 | fi |
---|
2183 | |
---|
2184 | temp_avail=${volume_avail%%${volume_avail: -1}*} |
---|
2185 | temp_quota=${volume_quota%%${volume_quota: -1}*} |
---|
2186 | |
---|
2187 | if [ ! ${unit_avail} = ${unit_quota} ] ; then |
---|
2188 | |
---|
2189 | # Convertion |
---|
2190 | if [ ${volume_avail: -1} = "T" ] ; then |
---|
2191 | (( temp_avail = temp_avail * 1000000000000 )) |
---|
2192 | elif [ ${volume_avail: -1} = "G" ] ; then |
---|
2193 | (( temp_avail = temp_avail * 1000000000 )) |
---|
2194 | elif [ ${volume_avail: -1} = "M" ] ; then |
---|
2195 | (( temp_avail = temp_avail * 1000000 )) |
---|
2196 | elif [ ${volume_avail: -1} = "k" ] ; then |
---|
2197 | (( temp_avail = temp_avail * 1000 )) |
---|
2198 | else |
---|
2199 | (( temp_avail = volume_avail )) |
---|
2200 | fi |
---|
2201 | if [ ${volume_quota: -1} = "T" ] ; then |
---|
2202 | (( temp_quota = temp_quota * 1000000000000 )) |
---|
2203 | elif [ ${volume_quota: -1} = "G" ] ; then |
---|
2204 | (( temp_quota = temp_quota * 1000000000 )) |
---|
2205 | elif [ ${volume_quota: -1} = "M" ] ; then |
---|
2206 | (( temp_quota = temp_quota * 1000000 )) |
---|
2207 | elif [ ${volume_quota: -1} = "k" ] ; then |
---|
2208 | (( temp_quota = temp_quota * 1000 )) |
---|
2209 | else |
---|
2210 | (( temp_quota = volume_quota )) |
---|
2211 | fi |
---|
2212 | fi |
---|
2213 | |
---|
2214 | quota_volume=$(echo "scale=2 ; $temp_quota/$temp_avail*100" | bc) |
---|
2215 | # echo "volume ratio is " $quota_volume |
---|
2216 | |
---|
2217 | if [ ${quota_volume} -ge ${limit_quota} ] ; then |
---|
2218 | IGCM_debug_Print 1 "Please, check your quota of volume on scratch" |
---|
2219 | IGCM_debug_Print 1 "${quota_volume}% of your quota is used" |
---|
2220 | IGCM_debug_Print 1 "Use the ccc_quota command to check" |
---|
2221 | IGCM_debug_Print 1 "You must have more than 10% available to run" |
---|
2222 | IGCM_debug_Exit "Not enough space to run ! STOP HERE" |
---|
2223 | IGCM_debug_Verif_Exit |
---|
2224 | fi |
---|
2225 | |
---|
2226 | fi |
---|
2227 | |
---|
2228 | # Check of the number of inodes |
---|
2229 | |
---|
2230 | inode_quota=$(ccc_quota | grep ' scratch' | awk '{print $6}') |
---|
2231 | inode_avail=$(ccc_quota | grep ' scratch' | awk '{print $7}') |
---|
2232 | |
---|
2233 | if ( [ ! X${inode_quota} = X ] && [ ! ${inode_quota} = "-" ] ) ; then |
---|
2234 | |
---|
2235 | unit_avail=${inode_avail: -1} |
---|
2236 | unit_quota=${inode_quota: -1} |
---|
2237 | |
---|
2238 | if [ "${unit_quota}" = "*" ] ; then |
---|
2239 | IGCM_debug_Print 1 "Please, check your quota of inode on scratch" |
---|
2240 | IGCM_debug_Print 1 "More than 100% of your quota is used" |
---|
2241 | IGCM_debug_Print 1 "Use the ccc_quota command to check" |
---|
2242 | IGCM_debug_Print 1 "You must have more than 10% available to run" |
---|
2243 | IGCM_debug_Exit "Not enough space to run ! STOP HERE" |
---|
2244 | IGCM_debug_Verif_Exit |
---|
2245 | fi |
---|
2246 | |
---|
2247 | temp_avail=${inode_avail%%${inode_avail: -1}*} |
---|
2248 | temp_quota=${inode_quota%%${inode_quota: -1}*} |
---|
2249 | |
---|
2250 | if [ ! ${unit_avail} = ${unit_quota} ] ; then |
---|
2251 | |
---|
2252 | # Convertion |
---|
2253 | if [ ${inode_avail: -1} = "T" ] ; then |
---|
2254 | (( temp_avail = temp_avail * 1000000000000 )) |
---|
2255 | elif [ ${inode_avail: -1} = "G" ] ; then |
---|
2256 | (( temp_avail = temp_avail * 1000000000 )) |
---|
2257 | elif [ ${inode_avail: -1} = "M" ] ; then |
---|
2258 | (( temp_avail = temp_avail * 1000000 )) |
---|
2259 | elif [ ${inode_avail: -1} = "k" ] ; then |
---|
2260 | (( temp_avail = temp_avail * 1000 )) |
---|
2261 | else |
---|
2262 | (( temp_avail = inode_avail )) |
---|
2263 | fi |
---|
2264 | |
---|
2265 | if [ ${inode_quota: -1} = "T" ] ; then |
---|
2266 | (( temp_quota = temp_quota * 1000000000000 )) |
---|
2267 | elif [ ${inode_quota: -1} = "G" ] ; then |
---|
2268 | (( temp_quota = temp_quota * 1000000000 )) |
---|
2269 | elif [ ${inode_quota: -1} = "M" ] ; then |
---|
2270 | (( temp_quota = temp_quota * 1000000 )) |
---|
2271 | elif [ ${inode_quota: -1} = "k" ] ; then |
---|
2272 | (( temp_quota = temp_quota * 1000 )) |
---|
2273 | else |
---|
2274 | (( temp_quota = inode_quota )) |
---|
2275 | fi |
---|
2276 | fi |
---|
2277 | quota_inode=$(echo "scale=2 ; $temp_quota/$temp_avail*100" | bc) |
---|
2278 | # echo "inode ratio is " $quota_inode |
---|
2279 | |
---|
2280 | if [ ${quota_inode} -ge ${limit_quota} ] ; then |
---|
2281 | IGCM_debug_Print 1 "Please, check your quota of inode on scratch" |
---|
2282 | IGCM_debug_Print 1 "${quota_inode}% of your quota is used" |
---|
2283 | IGCM_debug_Print 1 "Use the ccc_quota command to check" |
---|
2284 | IGCM_debug_Print 1 "You must have more than 10% available to run" |
---|
2285 | IGCM_debug_Exit "Not enough space to run ! STOP HERE" |
---|
2286 | IGCM_debug_Verif_Exit |
---|
2287 | fi |
---|
2288 | fi |
---|
2289 | IGCM_debug_PopStack "IGCM_sys_check_quota" |
---|
2290 | } |
---|
2291 | |
---|
2292 | #D-#================================================== |
---|
2293 | #D-function IGCM_sys_CountJobInQueue |
---|
2294 | #D-* Purpose: Check if job_name is currently |
---|
2295 | #D- running or in queue |
---|
2296 | #D-* Examples: IGCM_sys_CountJobInQueue ${JobName} NbRun |
---|
2297 | #D- |
---|
2298 | function IGCM_sys_CountJobInQueue { |
---|
2299 | IGCM_debug_PushStack "IGCM_sys_CountJobInQueue" |
---|
2300 | if ( $DEBUG_sys ) ; then |
---|
2301 | echo "IGCM_sys_CountJobInQueue" |
---|
2302 | fi |
---|
2303 | |
---|
2304 | #NbRun=$( ccc_mstat -f | grep -c ${JobName} ) |
---|
2305 | |
---|
2306 | # With -f option, the full job name is given in the last column |
---|
2307 | NbRun=$( ccc_mstat -f | gawk -v JobName=$1 'BEGIN { x=0 } ( $NF ~ JobName ) { x=x+1 } END { print x }' ) |
---|
2308 | |
---|
2309 | eval ${2}=${NbRun} |
---|
2310 | |
---|
2311 | IGCM_debug_PopStack "IGCM_sys_CountJobInQueue" |
---|
2312 | } |
---|
2313 | |
---|
2314 | ############################################################## |
---|
2315 | # NCO OPERATOR |
---|
2316 | |
---|
2317 | #D-#================================================== |
---|
2318 | #D-function IGCM_sys_ncap2 |
---|
2319 | #D-* Purpose: encapsulate ncap2 call so as to manage error code and retry |
---|
2320 | #D-* Examples: |
---|
2321 | #D- |
---|
2322 | function IGCM_sys_ncap2 { |
---|
2323 | IGCM_debug_PushStack "IGCM_sys_ncap2" -- $@ |
---|
2324 | if ( $DEBUG_sys ) ; then |
---|
2325 | echo "IGCM_sys_ncap2 :" $@ |
---|
2326 | fi |
---|
2327 | |
---|
2328 | typeset NB_ESSAI DELAI status i |
---|
2329 | # number of tentative |
---|
2330 | NB_ESSAI=3 |
---|
2331 | # time delay between tentative |
---|
2332 | DELAI=2 |
---|
2333 | |
---|
2334 | i=0 |
---|
2335 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2336 | ncap2 "$@" > out_rsync 2>&1 |
---|
2337 | status=$? |
---|
2338 | if [ ${status} -gt 0 ] ; then |
---|
2339 | IGCM_debug_Print 2 "IGCM_sys_ncap2 : error code ${status}" |
---|
2340 | cat out_rsync |
---|
2341 | \rm out_rsync |
---|
2342 | IGCM_debug_Print 2 "IGCM_sys_ncap2 : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2343 | sleep $DELAI |
---|
2344 | else |
---|
2345 | \rm out_rsync |
---|
2346 | break |
---|
2347 | fi |
---|
2348 | (( i = i + 1 )) |
---|
2349 | done |
---|
2350 | |
---|
2351 | if [ ${status} -gt 0 ] ; then |
---|
2352 | echo "IGCM_sys_ncap2 : ncap2 error" |
---|
2353 | IGCM_debug_Exit "ncap2" |
---|
2354 | fi |
---|
2355 | |
---|
2356 | IGCM_debug_PopStack "IGCM_sys_ncap2" |
---|
2357 | } |
---|
2358 | |
---|
2359 | #D-#================================================== |
---|
2360 | #D-function IGCM_sys_ncatted |
---|
2361 | #D-* Purpose: encapsulate ncatted call so as to manage error code and retry |
---|
2362 | #D-* Examples: |
---|
2363 | #D- |
---|
2364 | function IGCM_sys_ncatted { |
---|
2365 | IGCM_debug_PushStack "IGCM_sys_ncatted" -- $@ |
---|
2366 | if ( $DEBUG_sys ) ; then |
---|
2367 | echo "IGCM_sys_ncatted :" $@ |
---|
2368 | fi |
---|
2369 | |
---|
2370 | typeset NB_ESSAI DELAI status i |
---|
2371 | # number of tentative |
---|
2372 | NB_ESSAI=3 |
---|
2373 | # time delay between tentative |
---|
2374 | DELAI=2 |
---|
2375 | |
---|
2376 | i=0 |
---|
2377 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2378 | ncatted "$@" > out_rsync 2>&1 |
---|
2379 | status=$? |
---|
2380 | if [ ${status} -gt 0 ] ; then |
---|
2381 | IGCM_debug_Print 2 "IGCM_sys_ncatted : error code ${status}" |
---|
2382 | cat out_rsync |
---|
2383 | \rm out_rsync |
---|
2384 | IGCM_debug_Print 2 "IGCM_sys_ncatted : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2385 | sleep $DELAI |
---|
2386 | else |
---|
2387 | \rm out_rsync |
---|
2388 | break |
---|
2389 | fi |
---|
2390 | (( i = i + 1 )) |
---|
2391 | done |
---|
2392 | |
---|
2393 | if [ ${status} -gt 0 ] ; then |
---|
2394 | echo "IGCM_sys_ncatted : ncatted error" |
---|
2395 | IGCM_debug_Exit "ncatted" |
---|
2396 | fi |
---|
2397 | |
---|
2398 | IGCM_debug_PopStack "IGCM_sys_ncatted" |
---|
2399 | } |
---|
2400 | |
---|
2401 | #D-#================================================== |
---|
2402 | #D-function IGCM_sys_ncbo |
---|
2403 | #D-* Purpose: encapsulate ncbo call so as to manage error code and retry |
---|
2404 | #D-* Examples: |
---|
2405 | #D- |
---|
2406 | function IGCM_sys_ncbo { |
---|
2407 | IGCM_debug_PushStack "IGCM_sys_ncbo" -- $@ |
---|
2408 | if ( $DEBUG_sys ) ; then |
---|
2409 | echo "IGCM_sys_ncbo :" $@ |
---|
2410 | fi |
---|
2411 | |
---|
2412 | typeset NB_ESSAI DELAI status i |
---|
2413 | # number of tentative |
---|
2414 | NB_ESSAI=3 |
---|
2415 | # time delay between tentative |
---|
2416 | DELAI=2 |
---|
2417 | |
---|
2418 | i=0 |
---|
2419 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2420 | ncbo $@ > out_rsync 2>&1 |
---|
2421 | status=$? |
---|
2422 | if [ ${status} -gt 0 ] ; then |
---|
2423 | IGCM_debug_Print 2 "IGCM_sys_ncbo : error code ${status}" |
---|
2424 | cat out_rsync |
---|
2425 | \rm out_rsync |
---|
2426 | IGCM_debug_Print 2 "IGCM_sys_ncbo : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2427 | sleep $DELAI |
---|
2428 | else |
---|
2429 | \rm out_rsync |
---|
2430 | break |
---|
2431 | fi |
---|
2432 | (( i = i + 1 )) |
---|
2433 | done |
---|
2434 | |
---|
2435 | if [ ${status} -gt 0 ] ; then |
---|
2436 | echo "IGCM_sys_ncbo : ncbo error" |
---|
2437 | IGCM_debug_Exit "ncbo" |
---|
2438 | fi |
---|
2439 | |
---|
2440 | IGCM_debug_PopStack "IGCM_sys_ncbo" |
---|
2441 | } |
---|
2442 | |
---|
2443 | #D-#================================================== |
---|
2444 | #D-function IGCM_sys_ncdif |
---|
2445 | #D-* Purpose: encapsulate ncdiff call so as to manage error code and retry |
---|
2446 | #D-* Examples: |
---|
2447 | #D- |
---|
2448 | function IGCM_sys_ncdiff { |
---|
2449 | IGCM_debug_PushStack "IGCM_sys_ncdiff" -- $@ |
---|
2450 | if ( $DEBUG_sys ) ; then |
---|
2451 | echo "IGCM_sys_ncdiff :" $@ |
---|
2452 | fi |
---|
2453 | |
---|
2454 | typeset NB_ESSAI DELAI status i |
---|
2455 | # number of tentative |
---|
2456 | NB_ESSAI=3 |
---|
2457 | # time delay between tentative |
---|
2458 | DELAI=2 |
---|
2459 | |
---|
2460 | i=0 |
---|
2461 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2462 | ncdiff $@ > out_rsync 2>&1 |
---|
2463 | status=$? |
---|
2464 | if [ ${status} -gt 0 ] ; then |
---|
2465 | IGCM_debug_Print 2 "IGCM_sys_ncdiff : error code ${status}" |
---|
2466 | cat out_rsync |
---|
2467 | \rm out_rsync |
---|
2468 | IGCM_debug_Print 2 "IGCM_sys_ncdiff : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2469 | sleep $DELAI |
---|
2470 | else |
---|
2471 | \rm out_rsync |
---|
2472 | break |
---|
2473 | fi |
---|
2474 | (( i = i + 1 )) |
---|
2475 | done |
---|
2476 | |
---|
2477 | if [ ${status} -gt 0 ] ; then |
---|
2478 | echo "IGCM_sys_ncdiff : ncdiff error" |
---|
2479 | IGCM_debug_Exit "ncdiff" |
---|
2480 | fi |
---|
2481 | |
---|
2482 | IGCM_debug_PopStack "IGCM_sys_ncdiff" |
---|
2483 | } |
---|
2484 | |
---|
2485 | #D-#================================================== |
---|
2486 | #D-function IGCM_sys_ncea |
---|
2487 | #D-* Purpose: encapsulate ncea call so as to manage error code and retry |
---|
2488 | #D-* Examples: |
---|
2489 | #D- |
---|
2490 | function IGCM_sys_ncea { |
---|
2491 | IGCM_debug_PushStack "IGCM_sys_ncea" -- $@ |
---|
2492 | if ( $DEBUG_sys ) ; then |
---|
2493 | echo "IGCM_sys_ncea :" $@ |
---|
2494 | fi |
---|
2495 | |
---|
2496 | typeset NB_ESSAI DELAI status i |
---|
2497 | # number of tentative |
---|
2498 | NB_ESSAI=3 |
---|
2499 | # time delay between tentative |
---|
2500 | DELAI=2 |
---|
2501 | |
---|
2502 | i=0 |
---|
2503 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2504 | ncea $@ > out_rsync 2>&1 |
---|
2505 | status=$? |
---|
2506 | if [ ${status} -gt 0 ] ; then |
---|
2507 | IGCM_debug_Print 2 "IGCM_sys_ncea : error code ${status}" |
---|
2508 | cat out_rsync |
---|
2509 | \rm out_rsync |
---|
2510 | IGCM_debug_Print 2 "IGCM_sys_ncea : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2511 | sleep $DELAI |
---|
2512 | else |
---|
2513 | \rm out_rsync |
---|
2514 | break |
---|
2515 | fi |
---|
2516 | (( i = i + 1 )) |
---|
2517 | done |
---|
2518 | |
---|
2519 | if [ ${status} -gt 0 ] ; then |
---|
2520 | echo "IGCM_sys_ncea : ncea error" |
---|
2521 | IGCM_debug_Exit "ncea" |
---|
2522 | fi |
---|
2523 | |
---|
2524 | IGCM_debug_PopStack "IGCM_sys_ncea" |
---|
2525 | } |
---|
2526 | |
---|
2527 | #D-#================================================== |
---|
2528 | #D-function IGCM_sys_ncecat |
---|
2529 | #D-* Purpose: encapsulate ncecat call so as to manage error code and retry |
---|
2530 | #D-* Examples: |
---|
2531 | #D- |
---|
2532 | function IGCM_sys_ncecat { |
---|
2533 | IGCM_debug_PushStack "IGCM_sys_ncecat" -- $@ |
---|
2534 | if ( $DEBUG_sys ) ; then |
---|
2535 | echo "IGCM_sys_ncecat :" $@ |
---|
2536 | fi |
---|
2537 | |
---|
2538 | typeset NB_ESSAI DELAI status i |
---|
2539 | # number of tentative |
---|
2540 | NB_ESSAI=3 |
---|
2541 | # time delay between tentative |
---|
2542 | DELAI=2 |
---|
2543 | |
---|
2544 | i=0 |
---|
2545 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2546 | ncecat $@ > out_rsync 2>&1 |
---|
2547 | status=$? |
---|
2548 | if [ ${status} -gt 0 ] ; then |
---|
2549 | IGCM_debug_Print 2 "IGCM_sys_ncecat : error code ${status}" |
---|
2550 | cat out_rsync |
---|
2551 | \rm out_rsync |
---|
2552 | IGCM_debug_Print 2 "IGCM_sys_ncecat : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2553 | sleep $DELAI |
---|
2554 | else |
---|
2555 | \rm out_rsync |
---|
2556 | break |
---|
2557 | fi |
---|
2558 | (( i = i + 1 )) |
---|
2559 | done |
---|
2560 | |
---|
2561 | if [ ${status} -gt 0 ] ; then |
---|
2562 | echo "IGCM_sys_ncecat : ncecat error" |
---|
2563 | IGCM_debug_Exit "ncecat" |
---|
2564 | fi |
---|
2565 | |
---|
2566 | IGCM_debug_PopStack "IGCM_sys_ncecat" |
---|
2567 | } |
---|
2568 | |
---|
2569 | #D-#================================================== |
---|
2570 | #D-function IGCM_sys_ncflint |
---|
2571 | #D-* Purpose: encapsulate ncflint call so as to manage error code and retry |
---|
2572 | #D-* Examples: |
---|
2573 | #D- |
---|
2574 | function IGCM_sys_ncflint { |
---|
2575 | IGCM_debug_PushStack "IGCM_sys_ncflint" -- $@ |
---|
2576 | if ( $DEBUG_sys ) ; then |
---|
2577 | echo "IGCM_sys_ncflint :" $@ |
---|
2578 | fi |
---|
2579 | |
---|
2580 | typeset NB_ESSAI DELAI status i |
---|
2581 | # number of tentative |
---|
2582 | NB_ESSAI=3 |
---|
2583 | # time delay between tentative |
---|
2584 | DELAI=2 |
---|
2585 | |
---|
2586 | i=0 |
---|
2587 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2588 | ncflint $@ > out_rsync 2>&1 |
---|
2589 | status=$? |
---|
2590 | if [ ${status} -gt 0 ] ; then |
---|
2591 | IGCM_debug_Print 2 "IGCM_sys_ncflint : error code ${status}" |
---|
2592 | cat out_rsync |
---|
2593 | \rm out_rsync |
---|
2594 | IGCM_debug_Print 2 "IGCM_sys_ncflint : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2595 | sleep $DELAI |
---|
2596 | else |
---|
2597 | \rm out_rsync |
---|
2598 | break |
---|
2599 | fi |
---|
2600 | (( i = i + 1 )) |
---|
2601 | done |
---|
2602 | |
---|
2603 | if [ ${status} -gt 0 ] ; then |
---|
2604 | echo "IGCM_sys_ncflint : ncflint error" |
---|
2605 | IGCM_debug_Exit "ncflint" |
---|
2606 | fi |
---|
2607 | |
---|
2608 | IGCM_debug_PopStack "IGCM_sys_ncflint" |
---|
2609 | } |
---|
2610 | |
---|
2611 | #D-#================================================== |
---|
2612 | #D-function IGCM_sys_ncks |
---|
2613 | #D-* Purpose: encapsulate ncks call so as to manage error code and retry |
---|
2614 | #D-* Examples: |
---|
2615 | #D- |
---|
2616 | function IGCM_sys_ncks { |
---|
2617 | IGCM_debug_PushStack "IGCM_sys_ncks" -- $@ |
---|
2618 | if ( $DEBUG_sys ) ; then |
---|
2619 | echo "IGCM_sys_ncks :" $@ |
---|
2620 | fi |
---|
2621 | |
---|
2622 | typeset NB_ESSAI DELAI status i |
---|
2623 | # number of tentative |
---|
2624 | NB_ESSAI=3 |
---|
2625 | # time delay between tentative |
---|
2626 | DELAI=2 |
---|
2627 | |
---|
2628 | i=0 |
---|
2629 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2630 | ncks $@ > out_rsync 2>&1 |
---|
2631 | status=$? |
---|
2632 | if [ ${status} -gt 0 ] ; then |
---|
2633 | IGCM_debug_Print 2 "IGCM_sys_ncks : error code ${status}" |
---|
2634 | cat out_rsync |
---|
2635 | \rm out_rsync |
---|
2636 | IGCM_debug_Print 2 "IGCM_sys_ncks : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2637 | sleep $DELAI |
---|
2638 | else |
---|
2639 | \rm out_rsync |
---|
2640 | break |
---|
2641 | fi |
---|
2642 | (( i = i + 1 )) |
---|
2643 | done |
---|
2644 | |
---|
2645 | if [ ${status} -gt 0 ] ; then |
---|
2646 | echo "IGCM_sys_ncks : ncks error" |
---|
2647 | IGCM_debug_Exit "ncks" |
---|
2648 | fi |
---|
2649 | |
---|
2650 | IGCM_debug_PopStack "IGCM_sys_ncks" |
---|
2651 | } |
---|
2652 | |
---|
2653 | #D-#================================================== |
---|
2654 | #D-function IGCM_sys_ncpdq |
---|
2655 | #D-* Purpose: encapsulate ncpdq call so as to manage error code and retry |
---|
2656 | #D-* Examples: |
---|
2657 | #D- |
---|
2658 | function IGCM_sys_ncpdq { |
---|
2659 | IGCM_debug_PushStack "IGCM_sys_ncpdq" -- $@ |
---|
2660 | if ( $DEBUG_sys ) ; then |
---|
2661 | echo "IGCM_sys_ncpdq :" $@ |
---|
2662 | fi |
---|
2663 | |
---|
2664 | typeset NB_ESSAI DELAI status i |
---|
2665 | # number of tentative |
---|
2666 | NB_ESSAI=3 |
---|
2667 | # time delay between tentative |
---|
2668 | DELAI=2 |
---|
2669 | |
---|
2670 | i=0 |
---|
2671 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2672 | ncpdq $@ > out_rsync 2>&1 |
---|
2673 | status=$? |
---|
2674 | if [ ${status} -gt 0 ] ; then |
---|
2675 | IGCM_debug_Print 2 "IGCM_sys_ncpdq : error code ${status}" |
---|
2676 | cat out_rsync |
---|
2677 | \rm out_rsync |
---|
2678 | IGCM_debug_Print 2 "IGCM_sys_ncpdq : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2679 | sleep $DELAI |
---|
2680 | else |
---|
2681 | \rm out_rsync |
---|
2682 | break |
---|
2683 | fi |
---|
2684 | (( i = i + 1 )) |
---|
2685 | done |
---|
2686 | |
---|
2687 | if [ ${status} -gt 0 ] ; then |
---|
2688 | echo "IGCM_sys_ncpdq : ncpdq error" |
---|
2689 | IGCM_debug_Exit "ncpdq" |
---|
2690 | fi |
---|
2691 | |
---|
2692 | IGCM_debug_PopStack "IGCM_sys_ncpdq" |
---|
2693 | } |
---|
2694 | |
---|
2695 | #D-#================================================== |
---|
2696 | #D-function IGCM_sys_ncra |
---|
2697 | #D-* Purpose: encapsulate ncra call so as to manage error code and retry |
---|
2698 | #D-* Examples: |
---|
2699 | #D- |
---|
2700 | function IGCM_sys_ncra { |
---|
2701 | IGCM_debug_PushStack "IGCM_sys_ncra" -- $@ |
---|
2702 | if ( $DEBUG_sys ) ; then |
---|
2703 | echo "IGCM_sys_ncra :" $@ |
---|
2704 | fi |
---|
2705 | |
---|
2706 | typeset NB_ESSAI DELAI status i |
---|
2707 | # number of tentative |
---|
2708 | NB_ESSAI=3 |
---|
2709 | # time delay between tentative |
---|
2710 | DELAI=2 |
---|
2711 | |
---|
2712 | i=0 |
---|
2713 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2714 | ncra $@ > out_rsync 2>&1 |
---|
2715 | status=$? |
---|
2716 | if [ ${status} -gt 0 ] ; then |
---|
2717 | IGCM_debug_Print 2 "IGCM_sys_ncra : error code ${status}" |
---|
2718 | cat out_rsync |
---|
2719 | \rm out_rsync |
---|
2720 | IGCM_debug_Print 2 "IGCM_sys_ncra : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2721 | sleep $DELAI |
---|
2722 | else |
---|
2723 | \rm out_rsync |
---|
2724 | break |
---|
2725 | fi |
---|
2726 | (( i = i + 1 )) |
---|
2727 | done |
---|
2728 | |
---|
2729 | if [ ${status} -gt 0 ] ; then |
---|
2730 | echo "IGCM_sys_ncra : ncra error" |
---|
2731 | IGCM_debug_Exit "ncra" |
---|
2732 | fi |
---|
2733 | |
---|
2734 | IGCM_debug_PopStack "IGCM_sys_ncra" |
---|
2735 | } |
---|
2736 | |
---|
2737 | #D-#================================================== |
---|
2738 | #D-function IGCM_sys_ncrcat |
---|
2739 | #D-* Purpose: encapsulate ncrcat call so as to manage error code and retry |
---|
2740 | #D-* Examples: |
---|
2741 | #D- |
---|
2742 | function IGCM_sys_ncrcat { |
---|
2743 | IGCM_debug_PushStack "IGCM_sys_ncrcat" -- $@ |
---|
2744 | if ( $DEBUG_sys ) ; then |
---|
2745 | echo "IGCM_sys_ncrcat :" $@ |
---|
2746 | fi |
---|
2747 | |
---|
2748 | typeset NB_ESSAI DELAI status i lastArg |
---|
2749 | # number of tentative |
---|
2750 | NB_ESSAI=3 |
---|
2751 | # time delay between tentative |
---|
2752 | DELAI=2 |
---|
2753 | |
---|
2754 | i=0 |
---|
2755 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2756 | ncrcat $@ > out_rsync 2>&1 |
---|
2757 | status=$? |
---|
2758 | if [ ${status} -gt 0 ] ; then |
---|
2759 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : error code ${status}" |
---|
2760 | cat out_rsync |
---|
2761 | \rm out_rsync |
---|
2762 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2763 | sleep $DELAI |
---|
2764 | elif [ ! "X$( grep "WARNING Intra-file non-monotonicity" out_rsync )" = "X" ] ; then |
---|
2765 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : WARNING Intra-file non-monotonicity" |
---|
2766 | cat out_rsync |
---|
2767 | # remove files having corrupted time axis |
---|
2768 | eval lastArg=\${$#} |
---|
2769 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : Delete ${lastArg}" |
---|
2770 | \rm ${lastArg} |
---|
2771 | \rm out_rsync |
---|
2772 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2773 | sleep $DELAI |
---|
2774 | else |
---|
2775 | \rm out_rsync |
---|
2776 | break |
---|
2777 | fi |
---|
2778 | (( i = i + 1 )) |
---|
2779 | done |
---|
2780 | |
---|
2781 | if [ ${status} -gt 0 ] ; then |
---|
2782 | echo "IGCM_sys_ncrcat : ncrcat error" |
---|
2783 | #IGCM_debug_Exit "ncrcat" |
---|
2784 | fi |
---|
2785 | |
---|
2786 | IGCM_debug_PopStack "IGCM_sys_ncrcat" |
---|
2787 | } |
---|
2788 | |
---|
2789 | #D-#================================================== |
---|
2790 | #D-function IGCM_sys_ncrename |
---|
2791 | #D-* Purpose: encapsulate ncrename call so as to manage error code and retry |
---|
2792 | #D-* Examples: |
---|
2793 | #D- |
---|
2794 | function IGCM_sys_ncrename { |
---|
2795 | IGCM_debug_PushStack "IGCM_sys_ncrename" -- $@ |
---|
2796 | if ( $DEBUG_sys ) ; then |
---|
2797 | echo "IGCM_sys_ncrename :" $@ |
---|
2798 | fi |
---|
2799 | |
---|
2800 | typeset NB_ESSAI DELAI status i |
---|
2801 | # number of tentative |
---|
2802 | NB_ESSAI=3 |
---|
2803 | # time delay between tentative |
---|
2804 | DELAI=2 |
---|
2805 | |
---|
2806 | i=0 |
---|
2807 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2808 | ncrename $@ > out_rsync 2>&1 |
---|
2809 | status=$? |
---|
2810 | if [ ${status} -gt 0 ] ; then |
---|
2811 | IGCM_debug_Print 2 "IGCM_sys_ncrename : error code ${status}" |
---|
2812 | cat out_rsync |
---|
2813 | \rm out_rsync |
---|
2814 | IGCM_debug_Print 2 "IGCM_sys_ncrename : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2815 | sleep $DELAI |
---|
2816 | else |
---|
2817 | \rm out_rsync |
---|
2818 | break |
---|
2819 | fi |
---|
2820 | (( i = i + 1 )) |
---|
2821 | done |
---|
2822 | |
---|
2823 | if [ ${status} -gt 0 ] ; then |
---|
2824 | echo "IGCM_sys_ncrename : ncrename error" |
---|
2825 | IGCM_debug_Exit "ncrename" |
---|
2826 | fi |
---|
2827 | |
---|
2828 | IGCM_debug_PopStack "IGCM_sys_ncrename" |
---|
2829 | } |
---|
2830 | |
---|
2831 | #D-#================================================== |
---|
2832 | #D-function IGCM_sys_ncwa |
---|
2833 | #D-* Purpose: encapsulate ncwa call so as to manage error code and retry |
---|
2834 | #D-* Examples: |
---|
2835 | #D- |
---|
2836 | function IGCM_sys_ncwa { |
---|
2837 | IGCM_debug_PushStack "IGCM_sys_ncwa" -- $@ |
---|
2838 | if ( $DEBUG_sys ) ; then |
---|
2839 | echo "IGCM_sys_ncwa :" $@ |
---|
2840 | fi |
---|
2841 | |
---|
2842 | typeset NB_ESSAI DELAI status i |
---|
2843 | # number of tentative |
---|
2844 | NB_ESSAI=3 |
---|
2845 | # time delay between tentative |
---|
2846 | DELAI=2 |
---|
2847 | |
---|
2848 | i=0 |
---|
2849 | while [ $i -lt $NB_ESSAI ] ; do |
---|
2850 | ncwa $@ > out_rsync 2>&1 |
---|
2851 | status=$? |
---|
2852 | if [ ${status} -gt 0 ] ; then |
---|
2853 | IGCM_debug_Print 2 "IGCM_sys_ncwa : error code ${status}" |
---|
2854 | cat out_rsync |
---|
2855 | \rm out_rsync |
---|
2856 | IGCM_debug_Print 2 "IGCM_sys_ncwa : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
2857 | sleep $DELAI |
---|
2858 | else |
---|
2859 | \rm out_rsync |
---|
2860 | break |
---|
2861 | fi |
---|
2862 | (( i = i + 1 )) |
---|
2863 | done |
---|
2864 | |
---|
2865 | if [ ${status} -gt 0 ] ; then |
---|
2866 | echo "IGCM_sys_ncwa : ncwa error" |
---|
2867 | IGCM_debug_Exit "ncwa" |
---|
2868 | fi |
---|
2869 | |
---|
2870 | IGCM_debug_PopStack "IGCM_sys_ncwa" |
---|
2871 | } |
---|
2872 | |
---|
2873 | ############################################################## |
---|
2874 | # CDO OPERATOR |
---|
2875 | |
---|
2876 | #D-#================================================== |
---|
2877 | #D-function IGCM_sys_cdo |
---|
2878 | #D-* Purpose: encapsulate cdo call so as to manage error code and retry |
---|
2879 | #D-* Examples: |
---|
2880 | #D- |
---|
2881 | function IGCM_sys_cdo { |
---|
2882 | IGCM_debug_PushStack "IGCM_sys_cdo" -- $@ |
---|
2883 | if ( $DEBUG_sys ) ; then |
---|
2884 | echo "IGCM_sys_cdo :" $@ |
---|
2885 | fi |
---|
2886 | |
---|
2887 | typeset status |
---|
2888 | |
---|
2889 | \cdo $@ > out_rsync 2>&1 |
---|
2890 | status=$? |
---|
2891 | if [ ${status} -gt 0 ] ; then |
---|
2892 | echo "IGCM_sys_cdo : error code ${status}" |
---|
2893 | cat out_rsync |
---|
2894 | \rm out_rsync |
---|
2895 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
2896 | return 1 |
---|
2897 | else |
---|
2898 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
2899 | return 0 |
---|
2900 | fi |
---|
2901 | |
---|
2902 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
2903 | } |
---|