[257] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | #************************************************************** |
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| 4 | # Author: Sebastien Denvil, Martial Mancip |
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[373] | 5 | # Contact: Sebastien.Denvil__at__ipsl.jussieu.fr |
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| 6 | # $Revision:: $ Revision of last commit |
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| 7 | # $Author:: $ Author of last commit |
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| 8 | # $Date:: $ Date of last commit |
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[257] | 9 | # IPSL (2006) |
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| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 11 | # |
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| 12 | #************************************************************** |
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| 13 | |
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| 14 | #========================================================= |
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| 15 | # The documentation of this file can be automatically generated |
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| 16 | # if you use the prefix #D- for comments to be extracted. |
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| 17 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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| 18 | #========================================================= |
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| 19 | |
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| 20 | #D-#================================================== |
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| 21 | #D-LibIGCM_sys for Mercure X64 |
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| 22 | #D-#================================================== |
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| 23 | #D- |
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| 24 | #D- This ksh library if a layer under some usefull |
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| 25 | #D-environment variables and shell commands. |
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| 26 | #D-All those definitions depend on host particularities. |
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| 27 | #D-It manages a stack mechanism and test validity of operations. |
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| 28 | #D-All function described bellow must be prefixed by IGCM_sys. |
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| 29 | |
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| 30 | #==================================================== |
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| 31 | # libIGCM_sys PARAMETERS |
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| 32 | #==================================================== |
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| 33 | |
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| 34 | #==================================================== |
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| 35 | # set DEBUG_sys to true to output calls of function |
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| 36 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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| 37 | |
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| 38 | #==================================================== |
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| 39 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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| 40 | typeset -r DRYRUN=${DRYRUN:=0} |
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| 41 | |
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| 42 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 43 | # ------------------------------------------------------------------------------------- |
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| 44 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 45 | # | | Cp/Exe param files | | Chmod | | |
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| 46 | # | | Qsub | | | | |
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| 47 | # ------------------------------------------------------------------------------------- |
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| 48 | # | 0 | yes | yes | yes | yes | |
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| 49 | # ------------------------------------------------------------------------------------- |
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| 50 | # | 1 | yes | yes | yes | no | |
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| 51 | # ------------------------------------------------------------------------------------- |
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| 52 | # | 2 | yes | yes | no | no | |
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| 53 | # ------------------------------------------------------------------------------------- |
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| 54 | # | 3 | yes | no | no | no | |
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| 55 | # ------------------------------------------------------------------------------------- |
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| 56 | |
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| 57 | #===================================================== |
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| 58 | # Global Variables : |
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| 59 | #===================================================== |
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| 60 | # Language : "fr" or "en" |
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| 61 | typeset -r MYLANG="fr" |
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| 62 | |
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| 63 | #===================================================== |
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[544] | 64 | # Host and user names |
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[257] | 65 | # $hostname ou hostname |
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| 66 | typeset HOST=${HOST:=$( hostname )} |
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| 67 | # $username ou whoami |
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| 68 | typeset LOGIN=${LOGIN:=$( whoami )} |
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| 69 | |
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| 70 | #D- |
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| 71 | #D-#================================================== |
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| 72 | #D-Program used in libIGCM |
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| 73 | #D-#================================================== |
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| 74 | |
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| 75 | # rsync with path |
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| 76 | typeset -r RSYNC=/usr/bin/rsync |
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| 77 | # RSYNC_opt args to rsync |
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| 78 | typeset -r RSYNC_opt="-va" |
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| 79 | # ie storage filesystem |
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| 80 | typeset -r RHOST=mercure |
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| 81 | |
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| 82 | #==================================================== |
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[305] | 83 | # Set environment tools (ferret, nco, cdo) |
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| 84 | #==================================================== |
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[257] | 85 | . /home/cont003/p86ipsl/.atlas_env_mercure01_ksh |
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| 86 | |
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| 87 | #==================================================== |
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| 88 | # Host specific DIRECTORIES |
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| 89 | #==================================================== |
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| 90 | |
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| 91 | #==================================================== |
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| 92 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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| 93 | typeset -r R_EXE="${MODIPSL}/bin" |
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| 94 | |
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| 95 | #==================================================== |
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| 96 | # For interactive jobs on mercure |
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| 97 | PBS_O_WORKDIR=${PBS_O_WORKDIR:=$(pwd)} |
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| 98 | |
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| 99 | #==================================================== |
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| 100 | #- SUBMIT_DIR : submission dir |
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| 101 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${PBS_O_WORKDIR}} |
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| 102 | |
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| 103 | #==================================================== |
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| 104 | #- ARCHIVE |
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| 105 | typeset -r ARCHIVE=${DMFDIR} |
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| 106 | |
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| 107 | #==================================================== |
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| 108 | #- IN |
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| 109 | typeset -r R_IN=${R_IN:=/dmnfs/cont003/p86ipsl/IGCM} |
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[438] | 110 | typeset -r R_IN_ECMWF=${R_IN_ECMWF:=/dmnfs/cont003/p24data} |
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[257] | 111 | |
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| 112 | #==================================================== |
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[544] | 113 | #- R_OUT |
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[257] | 114 | typeset -r R_OUT=${ARCHIVE}/IGCM_OUT |
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| 115 | |
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| 116 | #==================================================== |
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[544] | 117 | #- R_BUF (ONLY FOR double copy an scratch) |
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| 118 | typeset -r R_BUF=${SCRATCHDIR}/IGCM_OUT |
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[257] | 119 | |
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| 120 | #==================================================== |
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[544] | 121 | #- BIG_DIR : BIG_DIR to store files waiting for rebuild |
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| 122 | typeset -r BIG_DIR=${BIG_DIR:=${SCRATCHDIR}/REBUILD} |
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| 123 | |
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| 124 | #==================================================== |
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[257] | 125 | #- OUT_POST |
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| 126 | typeset -r R_OUT_POST=${SCRATCHDIR}/IGCM_OUT |
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| 127 | |
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| 128 | #==================================================== |
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| 129 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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[478] | 130 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${CSCRATCHDIR}/TMPDIR_IGCM/${JOBID}} |
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[257] | 131 | |
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| 132 | #==================================================== |
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| 133 | #- Max number of arguments passed to nco operator or demigration command |
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| 134 | UNIX_MAX_LIMIT=360 |
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| 135 | |
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| 136 | #D-#================================================== |
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| 137 | #D-function IGCM_sys_RshMaster |
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| 138 | #D-* Purpose: Just a fake command to wrapp |
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| 139 | #D- IGCM_card call in post-treatment |
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| 140 | #D- Ulam do not see brodie filesystem |
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| 141 | #D- Cesium do not see all mercure filesystem |
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| 142 | #D- That's why we need this hack. |
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| 143 | #D-* Examples: |
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| 144 | #D- |
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| 145 | function IGCM_sys_RshMaster { |
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[544] | 146 | IGCM_debug_PushStack "IGCM_sys_RshMaster" $@ |
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| 147 | /bin/ksh <<-EOF |
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[257] | 148 | export libIGCM=${libIGCM} |
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| 149 | export DEBUG_debug=${DEBUG_debug} |
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| 150 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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| 151 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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| 152 | ${@} |
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| 153 | EOF |
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[544] | 154 | if [ $? -gt 0 ] ; then |
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| 155 | echo "IGCM_sys_RshMaster : erreur." |
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| 156 | IGCM_debug_Exit "IGCM_sys_RshMaster" |
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| 157 | fi |
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| 158 | IGCM_debug_PopStack "IGCM_sys_RshMaster" |
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[257] | 159 | } |
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| 160 | |
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| 161 | #D-#================================================== |
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| 162 | #D-function IGCM_sys_RshArchive |
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| 163 | #D-* Purpose: Archive rsh command |
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| 164 | #D-* Examples: |
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| 165 | #D- |
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| 166 | function IGCM_sys_RshArchive { |
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[544] | 167 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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| 168 | /bin/ksh <<-EOF |
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[257] | 169 | ${@} |
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| 170 | EOF |
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[544] | 171 | if [ $? -gt 0 ] ; then |
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| 172 | echo "IGCM_sys_RshArchive : erreur." |
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| 173 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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| 174 | fi |
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| 175 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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[257] | 176 | } |
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| 177 | |
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| 178 | #D-#================================================== |
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| 179 | #D-function IGCM_sys_RshPost |
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[343] | 180 | #D-* Purpose: Post-process rsh command |
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[257] | 181 | #D-* Examples: |
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| 182 | #D- |
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| 183 | function IGCM_sys_RshPost { |
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[544] | 184 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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| 185 | if ( $DEBUG_sys ) ; then |
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| 186 | echo "IGCM_sys_RshPost :" $@ |
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| 187 | fi |
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| 188 | /bin/ksh ${@} |
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| 189 | if [ $? -gt 0 ] ; then |
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| 190 | echo "IGCM_sys_RshPost : erreur." |
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| 191 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 192 | fi |
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| 193 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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[257] | 194 | } |
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| 195 | |
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| 196 | #D-#================================================== |
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[442] | 197 | #D-function IGCM_sys_SendMail |
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| 198 | #D-* Purpose: Send mail when simulation is over |
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| 199 | #D-* Examples: |
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| 200 | #D- |
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| 201 | function IGCM_sys_SendMail { |
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[544] | 202 | IGCM_debug_PushStack "IGCM_sys_SendMail" $@ |
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| 203 | if ( $DEBUG_sys ) ; then |
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| 204 | echo "IGCM_sys_SendMail :" $@ |
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| 205 | fi |
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[442] | 206 | |
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[544] | 207 | if ( ${ExitFlag} ) ; then |
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| 208 | status=failed |
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| 209 | else |
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| 210 | status=completed |
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| 211 | fi |
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| 212 | cat << END_MAIL > job_end.mail |
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[442] | 213 | Dear ${LOGIN}, |
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| 214 | |
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[452] | 215 | Simulation ${config_UserChoices_JobName} is ${status} on supercomputer `hostname`. |
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[442] | 216 | Job started : ${DateBegin} |
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| 217 | Job ended : ${DateEnd} |
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| 218 | Output files are available in ${R_SAVE} |
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[452] | 219 | Script files, Script Outputs and Debug files (if necessary) are available in ${SUBMIT_DIR} |
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[442] | 220 | END_MAIL |
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| 221 | |
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[544] | 222 | if [ X"${config_UserChoices_MailName}" != X ] ; then |
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| 223 | mailx -s "${config_UserChoices_JobName} ${status}" ${config_UserChoices_MailName} < job_end.mail |
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| 224 | elif [ -f ~/.forward ] ; then |
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| 225 | mailx -s "${config_UserChoices_JobName} ${status}" $( cat ~/.forward ) < job_end.mail |
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| 226 | else |
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| 227 | mailx -s "${config_UserChoices_JobName} ${status}" ${LOGIN} < job_end.mail |
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| 228 | fi |
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[442] | 229 | |
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[544] | 230 | if [ $? -gt 0 ] ; then |
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| 231 | echo "IGCM_sys_SendMail : erreur." |
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| 232 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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| 233 | fi |
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| 234 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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[442] | 235 | } |
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| 236 | |
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| 237 | #D-#================================================== |
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[257] | 238 | #D-function IGCM_sys_Mkdir |
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| 239 | #D-* Purpose: Master locale mkdir command |
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| 240 | #D-* Examples: |
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| 241 | #D- |
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| 242 | function IGCM_sys_Mkdir { |
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[544] | 243 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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| 244 | if ( $DEBUG_sys ) ; then |
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| 245 | echo "IGCM_sys_Mkdir :" $@ |
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| 246 | fi |
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| 247 | if [ ! -d ${1} ]; then |
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| 248 | \mkdir -p $1 |
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| 249 | if [ $? -gt 0 ] ; then |
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| 250 | echo "IGCM_sys_Mkdir : erreur." |
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| 251 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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[257] | 252 | fi |
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[544] | 253 | fi |
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| 254 | # vérification : |
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| 255 | if [ ! -d ${1} ] ; then |
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| 256 | echo "IGCM_sys_Mkdir : erreur." |
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| 257 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 258 | fi |
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| 259 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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[257] | 260 | } |
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| 261 | |
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| 262 | #D-#================================================== |
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| 263 | #D-function IGCM_sys_MkdirArchive |
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| 264 | #D-* Purpose: Mkdir on Archive |
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| 265 | #D-* Examples: |
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| 266 | #D- |
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| 267 | function IGCM_sys_MkdirArchive { |
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[544] | 268 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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| 269 | if ( $DEBUG_sys ) ; then |
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| 270 | echo "IGCM_sys_MkdirArchive :" $@ |
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| 271 | fi |
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| 272 | #- creation de repertoire sur le serveur fichier |
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| 273 | if [ ! -d ${1} ]; then |
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| 274 | \mkdir -p $1 |
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| 275 | if [ $? -gt 0 ] ; then |
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| 276 | echo "IGCM_sys_MkdirArchive : erreur." |
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| 277 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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[257] | 278 | fi |
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[544] | 279 | fi |
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| 280 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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[257] | 281 | } |
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| 282 | |
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| 283 | #D-#================================================== |
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| 284 | #D-function IGCM_sys_MkdirWork |
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| 285 | #D-* Purpose: Mkdir on Work |
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| 286 | #D-* Examples: |
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| 287 | #D- |
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| 288 | function IGCM_sys_MkdirWork { |
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[544] | 289 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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| 290 | if ( $DEBUG_sys ) ; then |
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| 291 | echo "IGCM_sys_MkdirWork :" $@ |
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| 292 | fi |
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| 293 | #- creation de repertoire sur le serveur fichier |
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| 294 | if [ ! -d ${1} ]; then |
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| 295 | \mkdir -p $1 |
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| 296 | if [ $? -gt 0 ] ; then |
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| 297 | echo "IGCM_sys_MkdirWork : erreur." |
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| 298 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
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[257] | 299 | fi |
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[544] | 300 | fi |
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| 301 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
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[257] | 302 | } |
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| 303 | |
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| 304 | #D-#================================================== |
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| 305 | #D-function IGCM_sys_Cd |
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| 306 | #D-* Purpose: master cd command |
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| 307 | #D-* Examples: |
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| 308 | #D- |
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| 309 | function IGCM_sys_Cd { |
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[544] | 310 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
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| 311 | if ( $DEBUG_sys ) ; then |
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| 312 | echo "IGCM_sys_Cd :" $@ |
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| 313 | fi |
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| 314 | \cd $1 |
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| 315 | if [ $? -gt 0 ] ; then |
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| 316 | echo "IGCM_sys_Cd : erreur." |
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| 317 | IGCM_debug_Exit "IGCM_sys_Cd" |
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| 318 | fi |
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| 319 | IGCM_debug_PopStack "IGCM_sys_Cd" |
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[257] | 320 | } |
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| 321 | |
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| 322 | #D-#================================================== |
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| 323 | #D-function IGCM_sys_Chmod |
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| 324 | #D-* Purpose: Chmod |
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| 325 | #D-* Examples: |
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| 326 | #D- |
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| 327 | function IGCM_sys_Chmod { |
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[544] | 328 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
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| 329 | if ( $DEBUG_sys ) ; then |
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| 330 | echo "IGCM_sys_Chmod :" $@ |
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| 331 | fi |
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| 332 | if [ $DRYRUN -le 1 ]; then |
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| 333 | \chmod $@ |
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| 334 | if [ $? -gt 0 ] ; then |
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| 335 | echo "IGCM_sys_Chmod : erreur." |
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| 336 | IGCM_debug_Exit "IGCM_sys_Chmod" |
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[257] | 337 | fi |
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[544] | 338 | else |
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| 339 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
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| 340 | fi |
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| 341 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
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[257] | 342 | } |
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| 343 | |
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| 344 | #D-#================================================== |
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| 345 | #D-function IGCM_sys_FileSize |
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| 346 | #D-* Purpose: Filesize |
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| 347 | #D-* Examples: |
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| 348 | #D- |
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| 349 | function IGCM_sys_FileSize { |
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[544] | 350 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
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[257] | 351 | |
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[544] | 352 | typeset sizeF |
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| 353 | set +A sizeF -- $( ls -la ${1} ) |
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| 354 | if [ $? -gt 0 ] ; then |
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| 355 | IGCM_debug_Exit "IGCM_sys_FileSize" |
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| 356 | fi |
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| 357 | eval ${2}=${sizeF[4]} |
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[257] | 358 | |
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[544] | 359 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
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[257] | 360 | } |
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| 361 | |
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| 362 | #D-#================================================== |
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| 363 | #D-function IGCM_sys_TestDir |
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| 364 | #D-* Purpose: Test Directory that must exists |
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| 365 | #D-* Examples: |
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| 366 | #D- |
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| 367 | function IGCM_sys_TestDir { |
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[544] | 368 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
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| 369 | if ( $DEBUG_sys ) ; then |
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| 370 | echo "IGCM_sys_TestDir :" $@ |
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| 371 | fi |
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| 372 | typeset ExistFlag |
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| 373 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
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| 374 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
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[257] | 375 | |
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[544] | 376 | return ${ExistFlag} |
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[257] | 377 | } |
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| 378 | |
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| 379 | #D-#================================================== |
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| 380 | #D-function IGCM_sys_TestDirArchive |
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| 381 | #D-* Purpose: Test Directory that must exists on Archive |
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| 382 | #D-* Examples: |
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| 383 | #D- |
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| 384 | function IGCM_sys_TestDirArchive { |
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[544] | 385 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
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| 386 | if ( $DEBUG_sys ) ; then |
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| 387 | echo "IGCM_sys_TestDirArchive :" $@ |
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| 388 | fi |
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| 389 | typeset ExistFlag |
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| 390 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
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| 391 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
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[257] | 392 | |
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[544] | 393 | return ${ExistFlag} |
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[257] | 394 | } |
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| 395 | |
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| 396 | #D-#================================================== |
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| 397 | #D-function IGCM_sys_TestFileArchive |
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| 398 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
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| 399 | #D-* Examples: |
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| 400 | #D- |
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| 401 | function IGCM_sys_TestFileArchive { |
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[544] | 402 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
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| 403 | if ( $DEBUG_sys ) ; then |
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| 404 | echo "IGCM_sys_TestFileArchive :" $@ |
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| 405 | fi |
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| 406 | typeset ExistFlag |
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| 407 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
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| 408 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
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[257] | 409 | |
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[544] | 410 | return ${ExistFlag} |
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[257] | 411 | } |
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| 412 | |
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| 413 | #D-#================================================== |
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[544] | 414 | #D-function IGCM_sys_TestFileBuffer |
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| 415 | #D-* Purpose: Test file that must NOT EXISTS on Buffer |
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| 416 | #D-* Examples: |
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| 417 | #D- |
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| 418 | function IGCM_sys_TestFileBuffer { |
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| 419 | IGCM_debug_PushStack "IGCM_sys_TestFileBuffer" $@ |
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| 420 | typeset ExistFlag |
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| 421 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
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| 422 | IGCM_debug_PopStack "IGCM_sys_TestFileBuffer" |
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| 423 | |
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| 424 | return ${ExistFlag} |
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| 425 | } |
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| 426 | |
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| 427 | #D-#================================================== |
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[257] | 428 | #D-function IGCM_sys_CountFileArchive |
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| 429 | #D-* Purpose: Count files on Archive filesystem |
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| 430 | #D-* Examples: |
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| 431 | #D- |
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| 432 | function IGCM_sys_CountFileArchive { |
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[544] | 433 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
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| 434 | ls ${@} 2>/dev/null | wc -l |
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| 435 | if [ $? -gt 0 ] ; then |
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| 436 | echo "IGCM_sys_CountFileArchive : erreur." |
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| 437 | fi |
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| 438 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
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[257] | 439 | } |
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| 440 | |
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| 441 | #D-#================================================== |
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[544] | 442 | #D-function IGCM_sys_CountFileBuffer |
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| 443 | #D-* Purpose: Count files on Scratch filesystem |
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| 444 | #D-* Examples: |
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| 445 | #D- |
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| 446 | function IGCM_sys_CountFileBuffer { |
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| 447 | IGCM_debug_PushStack "IGCM_sys_CountFileBuffer" $@ |
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| 448 | ls ${@} 2>/dev/null | wc -l |
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| 449 | if [ $? -gt 0 ] ; then |
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| 450 | echo "IGCM_sys_CountFileBuffer : erreur." |
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| 451 | fi |
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| 452 | IGCM_debug_PopStack "IGCM_sys_CountFileBuffer" |
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| 453 | } |
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| 454 | |
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| 455 | #D-#================================================== |
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[257] | 456 | #D-function IGCM_sys_Tree |
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| 457 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
---|
| 458 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
---|
| 459 | #D- |
---|
| 460 | function IGCM_sys_Tree { |
---|
[544] | 461 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
---|
| 462 | if ( $DEBUG_sys ) ; then |
---|
| 463 | echo "IGCM_sys_Tree :" $@ |
---|
| 464 | fi |
---|
[257] | 465 | |
---|
[544] | 466 | \tree -f $@ |
---|
[257] | 467 | |
---|
[544] | 468 | IGCM_debug_PopStack "IGCM_sys_Tree" |
---|
[257] | 469 | } |
---|
| 470 | |
---|
| 471 | #D-#================================================== |
---|
| 472 | #D-function IGCM_sys_Tar |
---|
[544] | 473 | #D-* Purpose: master tar command |
---|
[257] | 474 | #D-* Examples: |
---|
| 475 | #D- |
---|
| 476 | function IGCM_sys_Tar { |
---|
[544] | 477 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
---|
| 478 | if ( $DEBUG_sys ) ; then |
---|
| 479 | echo "IGCM_sys_Tar :" $@ |
---|
| 480 | fi |
---|
| 481 | \tar cf $@ |
---|
| 482 | if [ $? -gt 0 ] ; then |
---|
| 483 | echo "IGCM_sys_Tar : erreur." |
---|
| 484 | IGCM_debug_Exit "IGCM_sys_Tar" |
---|
| 485 | fi |
---|
| 486 | IGCM_debug_PopStack "IGCM_sys_Tar" |
---|
[257] | 487 | } |
---|
| 488 | |
---|
| 489 | #D-#================================================== |
---|
| 490 | #D-function IGCM_sys_UnTar |
---|
| 491 | #D-* Purpose: master un-tar command |
---|
| 492 | #D-* Examples: |
---|
| 493 | #D- |
---|
| 494 | function IGCM_sys_UnTar { |
---|
[544] | 495 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
---|
| 496 | if ( $DEBUG_sys ) ; then |
---|
| 497 | echo "IGCM_sys_UnTar :" $@ |
---|
| 498 | fi |
---|
| 499 | \tar xvf $1 |
---|
| 500 | if [ $? -gt 0 ] ; then |
---|
| 501 | echo "IGCM_sys_UnTar : erreur." |
---|
| 502 | IGCM_debug_Exit "IGCM_sys_UnTar" |
---|
| 503 | fi |
---|
| 504 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
---|
[257] | 505 | } |
---|
| 506 | |
---|
| 507 | #D-#================================================== |
---|
| 508 | #D-function IGCM_sys_QsubPost |
---|
| 509 | #D-* Purpose: Qsub new job on scalaire |
---|
| 510 | #D-* Examples: |
---|
| 511 | #D- |
---|
| 512 | function IGCM_sys_QsubPost { |
---|
[544] | 513 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
| 514 | if ( $DEBUG_sys ) ; then |
---|
| 515 | echo "IGCM_sys_QsubPost :" $@ |
---|
| 516 | fi |
---|
| 517 | /usr/bin/nqsII/qsub -o ${POST_DIR}/${Script_Post_Output}.out ${libIGCM}/$1.job -v ${listVarEnv} |
---|
| 518 | if [ $? -gt 0 ] ; then |
---|
| 519 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
| 520 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
| 521 | fi |
---|
| 522 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
[257] | 523 | } |
---|
| 524 | |
---|
| 525 | #D-************************* |
---|
| 526 | #D- File transfer functions |
---|
| 527 | #D-************************* |
---|
| 528 | #D- |
---|
| 529 | |
---|
| 530 | #D-#================================================== |
---|
| 531 | #D-function IGCM_sys_Rsync_out |
---|
| 532 | #D-* Purpose: treat return val of rsync |
---|
| 533 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
| 534 | #D- Error values and explanations can depend on your system version. |
---|
| 535 | function IGCM_sys_Rsync_out { |
---|
[544] | 536 | RET=$1 |
---|
| 537 | if [ ! $RET ] ; then |
---|
| 538 | echo "rsync error !" |
---|
| 539 | fi |
---|
[257] | 540 | |
---|
[544] | 541 | if [ $MYLANG = "fr" ]; then |
---|
| 542 | case $RET in |
---|
| 543 | 0) return ;; |
---|
| 544 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
| 545 | echo "Erreur de syntaxe ou d'utilisation." |
---|
| 546 | return;; |
---|
| 547 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
| 548 | echo "Incompatibilité de protocole." |
---|
| 549 | return;; |
---|
| 550 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
| 551 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
| 552 | echo "répertoires" |
---|
| 553 | return;; |
---|
| 554 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
| 555 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
| 556 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
| 557 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
| 558 | echo "pas par le serveur a été spécifiée." |
---|
| 559 | return;; |
---|
| 560 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
| 561 | echo "Erreur dans le socket d'entrée sortie" |
---|
| 562 | return;; |
---|
| 563 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
| 564 | echo "Erreur d'entrée sortie fichier" |
---|
| 565 | return;; |
---|
| 566 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
| 567 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
| 568 | return;; |
---|
| 569 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
| 570 | echo "Erreur avec les diagnostics du programme" |
---|
| 571 | return;; |
---|
| 572 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
| 573 | echo "Erreur dans le code IPC" |
---|
| 574 | return;; |
---|
| 575 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
| 576 | echo "SIGUSR1 ou SIGINT reçu" |
---|
| 577 | return;; |
---|
| 578 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
| 579 | echo "Une erreur retournée par waitpid()" |
---|
| 580 | return;; |
---|
| 581 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
| 582 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
| 583 | return;; |
---|
| 584 | 23) echo "" |
---|
| 585 | echo "Erreur fichier inexistant" |
---|
| 586 | return;; |
---|
| 587 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
| 588 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
| 589 | return;; |
---|
| 590 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $RET |
---|
| 591 | return;; |
---|
| 592 | esac |
---|
| 593 | elif [ $MYLANG = "en" ] ; then |
---|
| 594 | case $RET in |
---|
| 595 | 0) return;; |
---|
| 596 | 1) echo "rsync error : Syntax or usage error " |
---|
| 597 | return;; |
---|
| 598 | 2) echo "rsync error : Protocol incompatibility " |
---|
| 599 | return;; |
---|
| 600 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
| 601 | return;; |
---|
| 602 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
| 603 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
| 604 | echo "them; or an option was specified that is supported by the client and" |
---|
| 605 | echo "not by the server." |
---|
| 606 | return;; |
---|
| 607 | 5) echo "rsync error : Error starting client-server protocol" |
---|
| 608 | return;; |
---|
| 609 | 10) echo "rsync error : Error in socket I/O " |
---|
| 610 | return;; |
---|
| 611 | 11) echo "rsync error : Error in file I/O " |
---|
| 612 | return;; |
---|
| 613 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
| 614 | return;; |
---|
| 615 | 13) echo "rsync error : Errors with program diagnostics " |
---|
| 616 | return;; |
---|
| 617 | 14) echo "rsync error : Error in IPC code " |
---|
| 618 | return;; |
---|
| 619 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
| 620 | return;; |
---|
| 621 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
| 622 | return;; |
---|
| 623 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
| 624 | return;; |
---|
| 625 | 23) echo "rsync error : Partial transfer due to error" |
---|
| 626 | return;; |
---|
| 627 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
| 628 | return;; |
---|
| 629 | 30) echo "rsync error : Timeout in data send/receive " |
---|
| 630 | return;; |
---|
| 631 | *) echo "rsync error : return code of rsync unknown :" $RET |
---|
| 632 | return;; |
---|
| 633 | esac |
---|
| 634 | else |
---|
| 635 | echo "unknown language $MYLANG." |
---|
| 636 | return |
---|
| 637 | fi |
---|
[257] | 638 | } |
---|
[544] | 639 | |
---|
[257] | 640 | #D-#================================================== |
---|
| 641 | #D-function IGCM_sys_Cp |
---|
| 642 | #D-* Purpose: generic cp |
---|
| 643 | #D-* Examples: |
---|
| 644 | #D- |
---|
| 645 | function IGCM_sys_Cp { |
---|
[544] | 646 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
| 647 | if ( $DEBUG_sys ) ; then |
---|
| 648 | echo "IGCM_sys_Cp :" $@ |
---|
| 649 | fi |
---|
[257] | 650 | |
---|
[544] | 651 | typeset RET |
---|
[257] | 652 | |
---|
[544] | 653 | echo cp $@ > out_rsync 2>&1 |
---|
| 654 | \cp $@ >> out_rsync 2>&1 |
---|
| 655 | RET=$? |
---|
[257] | 656 | |
---|
[544] | 657 | if [ ${RET} -gt 0 ] ; then |
---|
| 658 | echo "IGCM_sys_Cp : error." |
---|
| 659 | cat out_rsync |
---|
| 660 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
| 661 | else |
---|
| 662 | \rm out_rsync |
---|
| 663 | fi |
---|
| 664 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
[257] | 665 | } |
---|
| 666 | |
---|
| 667 | #D-#================================================== |
---|
| 668 | #D-function IGCM_sys_Rm |
---|
| 669 | #D-* Purpose: generic rm |
---|
| 670 | #D-* Examples: |
---|
| 671 | #D- |
---|
| 672 | function IGCM_sys_Rm { |
---|
[544] | 673 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
| 674 | if ( $DEBUG_sys ) ; then |
---|
| 675 | echo "IGCM_sys_Rm :" $@ |
---|
| 676 | fi |
---|
[257] | 677 | |
---|
[544] | 678 | typeset RET |
---|
[257] | 679 | |
---|
[544] | 680 | echo rm $@ > out_rsync 2>&1 |
---|
| 681 | \rm $@ >> out_rsync 2>&1 |
---|
| 682 | RET=$? |
---|
[257] | 683 | |
---|
[544] | 684 | if [ ${RET} -gt 0 ] ; then |
---|
| 685 | echo "IGCM_sys_Rm : error." |
---|
| 686 | cat out_rsync |
---|
| 687 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
| 688 | else |
---|
| 689 | \rm out_rsync |
---|
| 690 | fi |
---|
| 691 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
[257] | 692 | } |
---|
| 693 | |
---|
| 694 | #D-#================================================== |
---|
| 695 | #D-function IGCM_sys_RmRunDir |
---|
| 696 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
| 697 | #D- scheduler will do the job) |
---|
| 698 | #D-* Examples: |
---|
| 699 | #D- |
---|
| 700 | function IGCM_sys_RmRunDir { |
---|
[544] | 701 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
| 702 | if ( $DEBUG_sys ) ; then |
---|
| 703 | echo "IGCM_sys_RmRunDir :" $@ |
---|
| 704 | fi |
---|
[478] | 705 | |
---|
[544] | 706 | typeset RET |
---|
[478] | 707 | |
---|
[544] | 708 | echo rm $@ > out_rsync 2>&1 |
---|
| 709 | \rm $@ >> out_rsync 2>&1 |
---|
| 710 | RET=$? |
---|
[478] | 711 | |
---|
[544] | 712 | if [ ${RET} -gt 0 ] ; then |
---|
| 713 | echo "IGCM_sys_RmRunDir : error." |
---|
| 714 | cat out_rsync |
---|
| 715 | IGCM_debug_Exit "IGCM_sys_RmRunDir" |
---|
| 716 | else |
---|
| 717 | \rm out_rsync |
---|
| 718 | fi |
---|
| 719 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
[257] | 720 | } |
---|
| 721 | |
---|
| 722 | #D-#================================================== |
---|
| 723 | #D-function IGCM_sys_Mv |
---|
| 724 | #D-* Purpose: generic move |
---|
| 725 | #D-* Examples: |
---|
| 726 | #D- |
---|
| 727 | function IGCM_sys_Mv { |
---|
[544] | 728 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
| 729 | if ( $DEBUG_sys ) ; then |
---|
| 730 | echo "IGCM_sys_Mv :" $@ |
---|
| 731 | fi |
---|
[257] | 732 | |
---|
[544] | 733 | if [ $DRYRUN = 0 ]; then |
---|
[257] | 734 | |
---|
[544] | 735 | typeset RET |
---|
[257] | 736 | |
---|
[544] | 737 | echo mv $@ > out_rsync 2>&1 |
---|
| 738 | \mv $@ >> out_rsync 2>&1 |
---|
| 739 | RET=$? |
---|
| 740 | |
---|
| 741 | if [ ${RET} -gt 0 ] ; then |
---|
| 742 | echo "IGCM_sys_Mv : error in mv." |
---|
| 743 | cat out_rsync |
---|
| 744 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
[257] | 745 | else |
---|
[544] | 746 | \rm out_rsync |
---|
[257] | 747 | fi |
---|
[544] | 748 | else |
---|
| 749 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 750 | fi |
---|
[257] | 751 | |
---|
[544] | 752 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
[257] | 753 | } |
---|
| 754 | |
---|
| 755 | #D-#================================================== |
---|
| 756 | #D-function IGCM_sys_Put_Dir |
---|
| 757 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
| 758 | #D-* Examples: |
---|
| 759 | #D- |
---|
| 760 | function IGCM_sys_Put_Dir { |
---|
[544] | 761 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
| 762 | if ( $DEBUG_sys ) ; then |
---|
| 763 | echo "IGCM_sys_Put_Dir :" $@ |
---|
| 764 | fi |
---|
| 765 | if [ $DRYRUN = 0 ]; then |
---|
| 766 | if [ ! -d ${1} ] ; then |
---|
| 767 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
| 768 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 769 | return |
---|
[257] | 770 | fi |
---|
| 771 | |
---|
[544] | 772 | typeset RET |
---|
[257] | 773 | |
---|
[544] | 774 | # Only if we use rsync |
---|
| 775 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 776 | # |
---|
| 777 | #USUAL WAY |
---|
| 778 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 779 | RET=$? |
---|
[257] | 780 | |
---|
[544] | 781 | if [ ${RET} -gt 0 ] ; then |
---|
| 782 | echo "IGCM_sys_Put_Dir : error." |
---|
| 783 | cat out_rsync |
---|
| 784 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
[257] | 785 | else |
---|
[544] | 786 | \rm out_rsync |
---|
[257] | 787 | fi |
---|
[544] | 788 | else |
---|
| 789 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 790 | fi |
---|
| 791 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
[257] | 792 | } |
---|
| 793 | |
---|
| 794 | #D-#================================================== |
---|
| 795 | #D-function IGCM_sys_Get_Dir |
---|
| 796 | #D-* Purpose: Copy a complete directory from $(ARCHIVE) |
---|
| 797 | #D-* Examples: |
---|
| 798 | #D- |
---|
| 799 | function IGCM_sys_Get_Dir { |
---|
[544] | 800 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
| 801 | if ( $DEBUG_sys ) ; then |
---|
| 802 | echo "IGCM_sys_Get_Dir :" $@ |
---|
| 803 | fi |
---|
| 804 | if [ $DRYRUN = 0 ]; then |
---|
[257] | 805 | # if [ ! -d ${1} ] ; then |
---|
| 806 | # echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
| 807 | # IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 808 | # return |
---|
| 809 | # fi |
---|
| 810 | |
---|
[544] | 811 | typeset RET |
---|
[257] | 812 | |
---|
[544] | 813 | # Only if we use rsync |
---|
| 814 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 815 | # |
---|
| 816 | #USUAL WAY |
---|
| 817 | # add dmget (to demigrate all offline files) to reduce time of this command : |
---|
| 818 | dmget $1/* |
---|
| 819 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 820 | RET=$? |
---|
[257] | 821 | |
---|
[544] | 822 | if [ ${RET} -gt 0 ] ; then |
---|
| 823 | echo "IGCM_sys_Get_Dir : error." |
---|
| 824 | cat out_rsync |
---|
| 825 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
[257] | 826 | else |
---|
[544] | 827 | \rm out_rsync |
---|
[257] | 828 | fi |
---|
[544] | 829 | else |
---|
| 830 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 831 | fi |
---|
| 832 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
[257] | 833 | } |
---|
| 834 | |
---|
| 835 | #D-#================================================== |
---|
| 836 | #D-function IGCM_sys_Get_Master |
---|
| 837 | #D-* Purpose: Copy a complete directory from MASTER filesystem |
---|
| 838 | #D-* Examples: |
---|
| 839 | #D- |
---|
| 840 | function IGCM_sys_Get_Master { |
---|
[544] | 841 | IGCM_debug_PushStack "IGCM_sys_Get_Master" $@ |
---|
| 842 | if ( $DEBUG_sys ) ; then |
---|
| 843 | echo "IGCM_sys_Get_Master :" $@ |
---|
| 844 | fi |
---|
| 845 | if [ $DRYRUN = 0 ]; then |
---|
| 846 | if [ ! -d ${1} ] ; then |
---|
| 847 | echo "WARNING : IGCM_sys_Get_Master ${1} DOES NOT EXIST ." |
---|
| 848 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
| 849 | return |
---|
[257] | 850 | fi |
---|
| 851 | |
---|
[544] | 852 | typeset RET |
---|
[257] | 853 | |
---|
[544] | 854 | #USUAL WAY |
---|
| 855 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 856 | RET=$? |
---|
[257] | 857 | |
---|
[544] | 858 | if [ ${RET} -gt 0 ] ; then |
---|
| 859 | echo "IGCM_sys_Get_Master : error." |
---|
| 860 | cat out_rsync |
---|
| 861 | IGCM_debug_Exit "IGCM_sys_Get_Master" |
---|
[257] | 862 | else |
---|
[544] | 863 | \rm out_rsync |
---|
[257] | 864 | fi |
---|
[544] | 865 | else |
---|
| 866 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 867 | fi |
---|
| 868 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
[257] | 869 | } |
---|
| 870 | |
---|
| 871 | #D-#================================================== |
---|
[442] | 872 | #D-function IGCM_sys_Put_Rest |
---|
[544] | 873 | #D-* Purpose: Put computied restarts on ${ARCHIVE}. |
---|
[442] | 874 | #D- File and target directory must exist. |
---|
| 875 | #D-* Examples: |
---|
| 876 | #D- |
---|
| 877 | function IGCM_sys_Put_Rest { |
---|
[544] | 878 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
| 879 | if ( $DEBUG_sys ) ; then |
---|
| 880 | echo "IGCM_sys_Put_Rest :" $@ |
---|
| 881 | fi |
---|
| 882 | if [ $DRYRUN = 0 ]; then |
---|
| 883 | if [ ! -f ${1} ] ; then |
---|
| 884 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
| 885 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[442] | 886 | fi |
---|
| 887 | |
---|
[544] | 888 | typeset RET |
---|
| 889 | # |
---|
| 890 | if [ X${JobType} = XRUN ] ; then |
---|
| 891 | IGCM_sys_Chmod 444 ${1} |
---|
| 892 | fi |
---|
[442] | 893 | |
---|
[544] | 894 | # |
---|
| 895 | # USUAL WAY |
---|
| 896 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 897 | RET=$? |
---|
| 898 | |
---|
[442] | 899 | # #RSYNC WITH NETWORK SSH CALL |
---|
[544] | 900 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 901 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[442] | 902 | |
---|
| 903 | # #RSYNC WITH NFS USE |
---|
| 904 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 905 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
| 906 | |
---|
| 907 | # RET=$? |
---|
| 908 | # IGCM_sys_Rsync_out $RET |
---|
| 909 | |
---|
| 910 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 911 | # (( RET=RET+$? )) |
---|
| 912 | |
---|
[544] | 913 | if [ ${RET} -gt 0 ] ; then |
---|
| 914 | echo "IGCM_sys_Put_Rest : error." |
---|
| 915 | cat out_rsync |
---|
| 916 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[442] | 917 | else |
---|
[544] | 918 | \rm out_rsync |
---|
[442] | 919 | fi |
---|
[544] | 920 | else |
---|
| 921 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 922 | fi |
---|
| 923 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
[442] | 924 | } |
---|
| 925 | |
---|
| 926 | #D-#================================================== |
---|
[544] | 927 | #D-function IGCM_sys_PutBuffer_Rest |
---|
| 928 | #D-* Purpose: Put computied restarts on ${SCRATCHDIR}. |
---|
| 929 | #D- File and target directory must exist. |
---|
| 930 | #D-* Examples: |
---|
| 931 | #D- |
---|
| 932 | function IGCM_sys_PutBuffer_Rest { |
---|
| 933 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Rest" $@ |
---|
| 934 | if ( $DEBUG_sys ) ; then |
---|
| 935 | echo "IGCM_sys_PutBuffer_Rest :" $@ |
---|
| 936 | fi |
---|
| 937 | if [ $DRYRUN = 0 ]; then |
---|
| 938 | if [ ! -f ${1} ] ; then |
---|
| 939 | echo "ERROR : IGCM_sys_PutBuffer_Rest ${1} DOES NOT EXIST ." |
---|
| 940 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 941 | fi |
---|
| 942 | |
---|
| 943 | typeset RET |
---|
| 944 | # |
---|
| 945 | if [ X${JobType} = XRUN ] ; then |
---|
| 946 | IGCM_sys_Chmod 444 ${1} |
---|
| 947 | fi |
---|
| 948 | |
---|
| 949 | # |
---|
| 950 | # USUAL WAY |
---|
| 951 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 952 | RET=$? |
---|
| 953 | |
---|
| 954 | if [ ${RET} -gt 0 ] ; then |
---|
| 955 | echo "IGCM_sys_PutBuffer_Rest : error." |
---|
| 956 | cat out_rsync |
---|
| 957 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 958 | else |
---|
| 959 | \rm out_rsync |
---|
| 960 | fi |
---|
| 961 | else |
---|
| 962 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 963 | fi |
---|
| 964 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Rest" |
---|
| 965 | } |
---|
| 966 | |
---|
| 967 | #D-#================================================== |
---|
[257] | 968 | #D-function IGCM_sys_Put_Out |
---|
[544] | 969 | #D-* Purpose: Copy a file on ${ARCHIVE} after having chmod it in readonly |
---|
[257] | 970 | #D-* Examples: |
---|
| 971 | #D- |
---|
| 972 | function IGCM_sys_Put_Out { |
---|
[544] | 973 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
| 974 | if ( $DEBUG_sys ) ; then |
---|
| 975 | echo "IGCM_sys_Put_Out :" $@ |
---|
| 976 | fi |
---|
| 977 | if [ $DRYRUN = 0 ]; then |
---|
| 978 | if [ ! -f ${1} ] ; then |
---|
| 979 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
| 980 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 981 | return 1 |
---|
[257] | 982 | fi |
---|
[544] | 983 | # |
---|
| 984 | IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
| 985 | # |
---|
| 986 | typeset RET exist skip |
---|
[520] | 987 | |
---|
[544] | 988 | #===================================================== |
---|
| 989 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 990 | #===================================================== |
---|
[520] | 991 | |
---|
[544] | 992 | #echo ${2} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 993 | #if [ $? -eq 0 ] ; then |
---|
| 994 | # typeset WORKPATH FILEPATH |
---|
| 995 | # WORKPATH=$( dirname $2 | sed -e "s|${R_OUT}|${R_BUF}|" ) |
---|
| 996 | # IGCM_sys_MkdirWork ${WORKPATH} |
---|
| 997 | # FILEPATH=${WORKPATH}/$( basename $2 ) |
---|
| 998 | # # |
---|
| 999 | # IGCM_sys_Cp ${1} ${FILEPATH} |
---|
| 1000 | #fi |
---|
[520] | 1001 | |
---|
[544] | 1002 | if [ X${JobType} = XRUN ] ; then |
---|
| 1003 | if [ X${3} = X ] ; then |
---|
| 1004 | IGCM_sys_Chmod 444 ${1} |
---|
| 1005 | fi |
---|
| 1006 | fi |
---|
[257] | 1007 | |
---|
[544] | 1008 | exist=false |
---|
| 1009 | skip=false |
---|
| 1010 | if [ -f $2 ] ; then |
---|
| 1011 | IGCM_debug_Print 1 "$2 already exist" |
---|
| 1012 | dmget $2 |
---|
| 1013 | exist=true |
---|
| 1014 | if [ "X$( diff $1 $2 )" = X ] ; then |
---|
| 1015 | IGCM_debug_Print 2 "$1 and $2 are the same file, we skip the copy" |
---|
| 1016 | skip=true |
---|
| 1017 | else |
---|
| 1018 | IGCM_debug_Print 2 "$1 and $2 are not the same file, we force the copy" |
---|
[360] | 1019 | skip=false |
---|
[544] | 1020 | fi |
---|
| 1021 | fi |
---|
| 1022 | # |
---|
| 1023 | if ( [ X${exist} = Xtrue ] && [ X${skip} = Xfalse ] ) ; then |
---|
| 1024 | IGCM_sys_Chmod u+w $2 |
---|
| 1025 | fi |
---|
| 1026 | # USUAL WAY |
---|
| 1027 | if [ X${skip} = Xfalse ] ; then |
---|
| 1028 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1029 | RET=$? |
---|
| 1030 | if [ ${RET} -gt 0 ] ; then |
---|
| 1031 | echo "IGCM_sys_Put_Out : error." |
---|
| 1032 | cat out_rsync |
---|
| 1033 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
| 1034 | else |
---|
| 1035 | \rm out_rsync |
---|
| 1036 | fi |
---|
| 1037 | fi |
---|
[358] | 1038 | |
---|
[544] | 1039 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1040 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1041 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[257] | 1042 | |
---|
| 1043 | # #RSYNC WITH NFS USE |
---|
| 1044 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1045 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
| 1046 | |
---|
| 1047 | # RET=$? |
---|
| 1048 | # IGCM_sys_Rsync_out $RET |
---|
| 1049 | |
---|
| 1050 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1051 | # (( RET=RET+$? )) |
---|
| 1052 | |
---|
[544] | 1053 | else |
---|
| 1054 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1055 | fi |
---|
| 1056 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1057 | return 0 |
---|
| 1058 | } |
---|
| 1059 | |
---|
| 1060 | #D-#================================================== |
---|
| 1061 | #D-function IGCM_sys_PutBuffer_Out |
---|
| 1062 | #D-* Purpose: Copy a file on ${SCRATCHDIR} after having chmod it in readonly |
---|
| 1063 | #D-* Examples: |
---|
| 1064 | #D- |
---|
| 1065 | function IGCM_sys_PutBuffer_Out { |
---|
| 1066 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Out" $@ |
---|
| 1067 | if ( $DEBUG_sys ) ; then |
---|
| 1068 | echo "IGCM_sys_PutBuffer_Out :" $@ |
---|
| 1069 | fi |
---|
| 1070 | if [ $DRYRUN = 0 ]; then |
---|
| 1071 | if [ ! -f ${1} ] ; then |
---|
| 1072 | echo "WARNING : IGCM_sys_PutBuffer_Out ${1} DOES NOT EXIST ." |
---|
| 1073 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1074 | return 1 |
---|
| 1075 | fi |
---|
| 1076 | # |
---|
| 1077 | IGCM_sys_Mkdir $( dirname $2 ) |
---|
| 1078 | # |
---|
| 1079 | typeset RET |
---|
| 1080 | |
---|
| 1081 | if [ X${JobType} = XRUN ] ; then |
---|
| 1082 | if [ X${3} = X ] ; then |
---|
| 1083 | IGCM_sys_Chmod 444 ${1} |
---|
| 1084 | fi |
---|
| 1085 | fi |
---|
| 1086 | # |
---|
| 1087 | # USUAL WAY |
---|
| 1088 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1089 | RET=$? |
---|
| 1090 | |
---|
| 1091 | if [ ${RET} -gt 0 ] ; then |
---|
| 1092 | echo "IGCM_sys_PutBuffer_Out : error." |
---|
| 1093 | cat out_rsync |
---|
| 1094 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Out" |
---|
[257] | 1095 | else |
---|
[544] | 1096 | \rm out_rsync |
---|
[257] | 1097 | fi |
---|
[544] | 1098 | else |
---|
| 1099 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1100 | fi |
---|
| 1101 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1102 | return 0 |
---|
[257] | 1103 | } |
---|
| 1104 | |
---|
| 1105 | #D-#================================================== |
---|
| 1106 | #D-function IGCM_sys_Get |
---|
| 1107 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
| 1108 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
| 1109 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
| 1110 | function IGCM_sys_Get { |
---|
[544] | 1111 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
[257] | 1112 | |
---|
[544] | 1113 | typeset DEST RET dm_liste ifile target file_work |
---|
[257] | 1114 | |
---|
[544] | 1115 | if ( $DEBUG_sys ) ; then |
---|
| 1116 | echo "IGCM_sys_Get :" $@ |
---|
| 1117 | fi |
---|
| 1118 | if [ $DRYRUN -le 2 ]; then |
---|
| 1119 | if [ X${1} = X'/l' ] ; then |
---|
| 1120 | # test if the first file is present in the old computation : |
---|
| 1121 | eval set +A dm_liste \${${2}} |
---|
| 1122 | else |
---|
| 1123 | eval set +A dm_liste ${1} |
---|
[257] | 1124 | fi |
---|
[544] | 1125 | eval DEST=\${${#}} |
---|
[257] | 1126 | |
---|
[544] | 1127 | #===================================================== |
---|
| 1128 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 1129 | #===================================================== |
---|
[257] | 1130 | |
---|
[544] | 1131 | # Is it an R_OUT file (not R_IN) ? |
---|
| 1132 | #echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 1133 | #if [ $? -eq 0 ] ; then |
---|
| 1134 | # # Yes ? then we try to get it in SCRATCHDIR |
---|
| 1135 | # set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_BUF}|g" ) |
---|
| 1136 | # if [ -f ${file_work[0]} ] ; then |
---|
| 1137 | # IGCM_sys_Cp ${file_work[*]} ${DEST} |
---|
| 1138 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 1139 | # return |
---|
| 1140 | # fi |
---|
| 1141 | #fi |
---|
[257] | 1142 | |
---|
[544] | 1143 | # test if the (first) file is present in the old computation : |
---|
| 1144 | IGCM_sys_TestFileArchive ${dm_liste[0]} |
---|
| 1145 | RET=$? |
---|
| 1146 | if [ ${RET} -gt 0 ] ; then |
---|
| 1147 | echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ." |
---|
| 1148 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1149 | fi |
---|
[257] | 1150 | |
---|
[544] | 1151 | dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
| 1152 | RET=$? |
---|
[520] | 1153 | |
---|
[544] | 1154 | if [ ${RET} -gt 0 ] ; then |
---|
| 1155 | echo "WARNING IGCM_sys_Get : demigration error." |
---|
| 1156 | cat out_rsync |
---|
| 1157 | echo "WARNING IGCM_sys_Get : will stop later if the cp fails." |
---|
| 1158 | fi |
---|
[257] | 1159 | |
---|
[544] | 1160 | #if [ ${RET} -gt 0 ] ; then |
---|
| 1161 | # if [ ! "X$( grep "Lost dmusrcmd connection" out_rsync )" = "X" ] ; then |
---|
| 1162 | # cat out_rsync |
---|
| 1163 | # echo "WARNING IGCM_sys_Get : Lost dmusrcmd connection : " |
---|
| 1164 | # sleep 30 |
---|
| 1165 | # echo "We try another time" |
---|
| 1166 | # dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
| 1167 | # RET=$? |
---|
| 1168 | # if [ ${RET} -gt 0 ] ; then |
---|
| 1169 | # echo "ERROR IGCM_sys_Get : again demigration error :" |
---|
| 1170 | # cat out_rsync |
---|
| 1171 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1172 | # fi |
---|
| 1173 | # else |
---|
| 1174 | # echo "ERROR IGCM_sys_Get : demigration error :" |
---|
| 1175 | # cat out_rsync |
---|
| 1176 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1177 | # fi |
---|
| 1178 | #fi |
---|
[520] | 1179 | |
---|
[544] | 1180 | #USUAL WAY |
---|
| 1181 | if [ X${1} = X'/l' ] ; then |
---|
| 1182 | (( RET=0 )) |
---|
| 1183 | for target in ${dm_liste[*]} ; do |
---|
| 1184 | local_file=$( basename ${target} ) |
---|
| 1185 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1186 | (( RET = RET + $? )) |
---|
| 1187 | done |
---|
| 1188 | else |
---|
| 1189 | \cp ${dm_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1190 | RET=$? |
---|
| 1191 | fi |
---|
[257] | 1192 | |
---|
[544] | 1193 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1194 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1195 | # ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[257] | 1196 | |
---|
| 1197 | # #RSYNC WITH NFS USE |
---|
| 1198 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1199 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
| 1200 | |
---|
| 1201 | # RET=$? |
---|
| 1202 | # IGCM_sys_Rsync_out $RET |
---|
| 1203 | |
---|
| 1204 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1205 | # (( RET=RET+$? )) |
---|
| 1206 | |
---|
[544] | 1207 | if [ ${RET} -gt 0 ] ; then |
---|
| 1208 | echo "IGCM_sys_Get : copy error." |
---|
| 1209 | cat out_rsync |
---|
| 1210 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
[257] | 1211 | else |
---|
[544] | 1212 | \rm out_rsync |
---|
[257] | 1213 | fi |
---|
[544] | 1214 | else |
---|
| 1215 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1216 | fi |
---|
| 1217 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
[257] | 1218 | } |
---|
| 1219 | |
---|
| 1220 | #D-#================================================== |
---|
[544] | 1221 | #D-function IGCM_sys_GetBuffer |
---|
| 1222 | #D-* Purpose: Get a file from ${SCRATCHDIR} |
---|
| 1223 | #D-* Examples: IGCM_sys_GetBuffer myfile /destpath/myfile_with_PREFIX |
---|
| 1224 | #D- IGCM_sys_GetBuffer /l Array_contain_myfiles /destpath/ |
---|
| 1225 | function IGCM_sys_GetBuffer { |
---|
| 1226 | IGCM_debug_PushStack "IGCM_sys_GetBuffer" $@ |
---|
| 1227 | |
---|
| 1228 | typeset DEST RET buf_liste ifile target file_work |
---|
| 1229 | |
---|
| 1230 | if ( $DEBUG_sys ) ; then |
---|
| 1231 | echo "IGCM_sys_GetBuffer :" $@ |
---|
| 1232 | fi |
---|
| 1233 | if [ $DRYRUN -le 2 ]; then |
---|
| 1234 | if [ X${1} = X'/l' ] ; then |
---|
| 1235 | # test if the first file is present in the old computation : |
---|
| 1236 | eval set +A buf_liste \${${2}} |
---|
| 1237 | else |
---|
| 1238 | eval set +A buf_liste ${1} |
---|
| 1239 | fi |
---|
| 1240 | eval DEST=\${${#}} |
---|
| 1241 | |
---|
| 1242 | #USUAL WAY |
---|
| 1243 | if [ X${1} = X'/l' ] ; then |
---|
| 1244 | (( RET=0 )) |
---|
| 1245 | for target in ${buf_liste[*]} ; do |
---|
| 1246 | local_file=$( basename ${target} ) |
---|
| 1247 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1248 | (( RET = RET + $? )) |
---|
| 1249 | done |
---|
| 1250 | else |
---|
| 1251 | \cp ${buf_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1252 | RET=$? |
---|
| 1253 | fi |
---|
| 1254 | |
---|
| 1255 | if [ ${RET} -gt 0 ] ; then |
---|
| 1256 | echo "IGCM_sys_GetBuffer : copy error." |
---|
| 1257 | cat out_rsync |
---|
| 1258 | IGCM_debug_Exit "IGCM_sys_GetBuffer" |
---|
| 1259 | else |
---|
| 1260 | \rm out_rsync |
---|
| 1261 | fi |
---|
| 1262 | else |
---|
| 1263 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1264 | fi |
---|
| 1265 | IGCM_debug_PopStack "IGCM_sys_GetBuffer" |
---|
| 1266 | } |
---|
| 1267 | |
---|
| 1268 | #D-#================================================== |
---|
| 1269 | #D-function IGCM_sys_GetDate_FichWork |
---|
| 1270 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
| 1271 | #D-* Examples: |
---|
| 1272 | #D- |
---|
| 1273 | function IGCM_sys_GetDate_FichWork { |
---|
| 1274 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
| 1275 | if ( $DEBUG_sys ) ; then |
---|
| 1276 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
| 1277 | fi |
---|
| 1278 | # donne la date filesys d'un fichier sur la machine work |
---|
| 1279 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
| 1280 | } |
---|
| 1281 | |
---|
| 1282 | #D-#================================================== |
---|
| 1283 | #D-function IGCM_sys_GetDate_FichArchive |
---|
| 1284 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
| 1285 | #D-* Examples: |
---|
| 1286 | #D- |
---|
| 1287 | function IGCM_sys_GetDate_FichArchive { |
---|
| 1288 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
| 1289 | if ( $DEBUG_sys ) ; then |
---|
| 1290 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
| 1291 | fi |
---|
| 1292 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
| 1293 | } |
---|
| 1294 | |
---|
| 1295 | #D-#================================================== |
---|
[343] | 1296 | #D-function IGCM_sys_Dods_Rm |
---|
| 1297 | #D-* Purpose: DO NOTHING ! Put $(ARCHIVE) files on DODS internet protocole. |
---|
| 1298 | #D-* Examples: |
---|
| 1299 | #D- |
---|
| 1300 | function IGCM_sys_Dods_Rm { |
---|
[544] | 1301 | if ( $DEBUG_sys ) ; then |
---|
| 1302 | echo "IGCM_sys_Dods_Rm :" $@ |
---|
| 1303 | fi |
---|
| 1304 | typeset RET |
---|
| 1305 | RET=0 |
---|
| 1306 | if [ $DRYRUN = 0 ]; then |
---|
| 1307 | if [ ! -d /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} ] ; then |
---|
| 1308 | echo "WARNING : IGCM_sys_Dods_Rm /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} DOES NOT EXIST ." |
---|
| 1309 | echo "Nothing has been done." |
---|
| 1310 | return |
---|
[343] | 1311 | fi |
---|
[544] | 1312 | dods_rm public/${LOGIN}/${R_DODS}/${1} # > out_dods_rm 2>&1 |
---|
| 1313 | RET=$? |
---|
| 1314 | |
---|
[418] | 1315 | # if [ ${RET} -gt 0 ] ; then |
---|
| 1316 | # echo "IGCM_sys_Dods_Rm : error." |
---|
| 1317 | # cat out_dods_rm |
---|
| 1318 | # IGCM_debug_Exit "IGCM_sys_Dods_Rm" |
---|
| 1319 | # else |
---|
| 1320 | # rm out_dods_rm |
---|
| 1321 | # fi |
---|
| 1322 | |
---|
[544] | 1323 | else |
---|
| 1324 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1325 | fi |
---|
| 1326 | return $RET |
---|
[343] | 1327 | } |
---|
| 1328 | |
---|
| 1329 | #D-#================================================== |
---|
| 1330 | #D-function IGCM_sys_Dods_Cp |
---|
| 1331 | #D-* Purpose: Copy $(ARCHIVE) files on DODS internet protocole. |
---|
| 1332 | #D-* Examples: |
---|
| 1333 | #D- |
---|
| 1334 | function IGCM_sys_Dods_Cp { |
---|
[544] | 1335 | if ( $DEBUG_sys ) ; then |
---|
| 1336 | echo "IGCM_sys_Dods_Cp :" $@ |
---|
| 1337 | fi |
---|
| 1338 | typeset RET |
---|
| 1339 | RET=0 |
---|
| 1340 | if [ $DRYRUN = 0 ]; then |
---|
| 1341 | if [ ! -d ${R_SAVE}/${1} ] ; then |
---|
| 1342 | echo "WARNING : IGCM_sys_Dods_Cp ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
| 1343 | echo "Nothing has been done." |
---|
| 1344 | return |
---|
[343] | 1345 | fi |
---|
[544] | 1346 | # |
---|
| 1347 | dods_cp ${1} public/${LOGIN}/${R_DODS} # > out_dods_cp 2>&1 |
---|
| 1348 | RET=$? |
---|
| 1349 | |
---|
[348] | 1350 | # if [ ${RET} -gt 0 ] ; then |
---|
| 1351 | # echo "IGCM_sys_Dods_Cp : error." |
---|
| 1352 | # cat out_dods_cp |
---|
| 1353 | # IGCM_debug_Exit "IGCM_sys_Dods_Cp" |
---|
| 1354 | # else |
---|
| 1355 | # rm out_dods_cp |
---|
| 1356 | # fi |
---|
[418] | 1357 | |
---|
[544] | 1358 | else |
---|
| 1359 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1360 | fi |
---|
| 1361 | return $RET |
---|
[343] | 1362 | } |
---|
| 1363 | |
---|
| 1364 | #D-#================================================== |
---|
[257] | 1365 | #D-function IGCM_sys_Put_Dods |
---|
| 1366 | #D-* Purpose: Put $(ARCHIVE) files on DODS internet protocole. |
---|
| 1367 | #D-* Examples: |
---|
| 1368 | #D- |
---|
| 1369 | function IGCM_sys_Put_Dods { |
---|
[544] | 1370 | IGCM_debug_PushStack "IGCM_sys_Put_Dods" $@ |
---|
| 1371 | if ( $DEBUG_sys ) ; then |
---|
| 1372 | echo "IGCM_sys_Put_Dods :" $@ |
---|
| 1373 | fi |
---|
| 1374 | if [ $DRYRUN = 0 ]; then |
---|
| 1375 | if [ ! -d ${R_SAVE}/${1} ] ; then |
---|
| 1376 | echo "WARNING : IGCM_sys_Put_Dods ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
| 1377 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1378 | return |
---|
[257] | 1379 | fi |
---|
| 1380 | |
---|
[544] | 1381 | typeset RET |
---|
[257] | 1382 | # |
---|
[544] | 1383 | cd ${R_SAVE} |
---|
| 1384 | IGCM_sys_Dods_Rm ${1} |
---|
| 1385 | IGCM_sys_Dods_Cp ${1} |
---|
| 1386 | RET=0 |
---|
| 1387 | |
---|
| 1388 | if [ ${RET} -gt 0 ] ; then |
---|
| 1389 | echo "IGCM_sys_Put_Dods : error." |
---|
| 1390 | IGCM_debug_Exit "IGCM_sys_Put_Dods" |
---|
[257] | 1391 | fi |
---|
[544] | 1392 | else |
---|
| 1393 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1394 | fi |
---|
| 1395 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
[257] | 1396 | } |
---|
| 1397 | |
---|
| 1398 | ############################################################## |
---|
| 1399 | # REBUILD OPERATOR |
---|
| 1400 | |
---|
| 1401 | function IGCM_sys_rebuild { |
---|
[544] | 1402 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
| 1403 | if ( $DEBUG_sys ) ; then |
---|
| 1404 | echo "IGCM_sys_rebuild :" $@ |
---|
| 1405 | fi |
---|
| 1406 | /home/cont003/p86ipsl/X86_64/bin/rebuild -f -o $@ |
---|
| 1407 | if [ $? -gt 0 ] ; then |
---|
| 1408 | echo "IGCM_sys_rebuild : erreur ${@}." |
---|
| 1409 | IGCM_debug_Exit "rebuild" |
---|
| 1410 | fi |
---|
[257] | 1411 | |
---|
[544] | 1412 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
[257] | 1413 | } |
---|
| 1414 | |
---|
| 1415 | ############################################################## |
---|
| 1416 | # NCO OPERATOR |
---|
| 1417 | |
---|
[377] | 1418 | function IGCM_sys_ncap2 { |
---|
[544] | 1419 | IGCM_debug_PushStack "IGCM_sys_ncap2" -- $@ |
---|
| 1420 | if ( $DEBUG_sys ) ; then |
---|
| 1421 | echo "IGCM_sys_ncap2 :" $@ |
---|
| 1422 | fi |
---|
| 1423 | ncap2 "$@" |
---|
| 1424 | if [ $? -gt 0 ] ; then |
---|
| 1425 | echo "IGCM_sys_ncap2 : erreur ${@}." |
---|
| 1426 | IGCM_debug_Exit "ncap2" |
---|
| 1427 | fi |
---|
[257] | 1428 | |
---|
[544] | 1429 | IGCM_debug_PopStack "IGCM_sys_ncap2" |
---|
[257] | 1430 | } |
---|
| 1431 | |
---|
[375] | 1432 | function IGCM_sys_ncatted { |
---|
[544] | 1433 | IGCM_debug_PushStack "IGCM_sys_ncatted" -- $@ |
---|
| 1434 | if ( $DEBUG_sys ) ; then |
---|
| 1435 | echo "IGCM_sys_ncatted :" $@ |
---|
| 1436 | fi |
---|
| 1437 | ncatted "$@" |
---|
| 1438 | if [ $? -gt 0 ] ; then |
---|
| 1439 | echo "IGCM_sys_ncatted : erreur ${@}." |
---|
| 1440 | IGCM_debug_Exit "ncatted" |
---|
| 1441 | fi |
---|
[257] | 1442 | |
---|
[544] | 1443 | IGCM_debug_PopStack "IGCM_sys_ncatted" |
---|
[375] | 1444 | } |
---|
[257] | 1445 | |
---|
| 1446 | function IGCM_sys_ncbo { |
---|
[544] | 1447 | IGCM_debug_PushStack "IGCM_sys_ncbo" -- $@ |
---|
| 1448 | if ( $DEBUG_sys ) ; then |
---|
| 1449 | echo "IGCM_sys_ncbo :" $@ |
---|
| 1450 | fi |
---|
| 1451 | ncbo $@ |
---|
| 1452 | if [ $? -gt 0 ] ; then |
---|
| 1453 | echo "IGCM_sys_ncbo : erreur ${@}." |
---|
| 1454 | IGCM_debug_Exit "ncbo" |
---|
| 1455 | fi |
---|
[257] | 1456 | |
---|
[544] | 1457 | IGCM_debug_PopStack "IGCM_sys_ncbo" |
---|
[257] | 1458 | } |
---|
| 1459 | |
---|
| 1460 | function IGCM_sys_ncdiff { |
---|
[544] | 1461 | IGCM_debug_PushStack "IGCM_sys_ncdiff" -- $@ |
---|
| 1462 | if ( $DEBUG_sys ) ; then |
---|
| 1463 | echo "IGCM_sys_ncdiff :" $@ |
---|
| 1464 | fi |
---|
| 1465 | ncdiff $@ |
---|
| 1466 | if [ $? -gt 0 ] ; then |
---|
| 1467 | echo "IGCM_sys_ncdiff : erreur ${@}." |
---|
| 1468 | IGCM_debug_Exit "ncdiff" |
---|
| 1469 | fi |
---|
[257] | 1470 | |
---|
[544] | 1471 | IGCM_debug_PopStack "IGCM_sys_ncdiff" |
---|
[257] | 1472 | } |
---|
| 1473 | |
---|
| 1474 | function IGCM_sys_ncea { |
---|
[544] | 1475 | IGCM_debug_PushStack "IGCM_sys_ncea" -- $@ |
---|
| 1476 | if ( $DEBUG_sys ) ; then |
---|
| 1477 | echo "IGCM_sys_ncea :" $@ |
---|
| 1478 | fi |
---|
| 1479 | ncea $@ |
---|
| 1480 | if [ $? -gt 0 ] ; then |
---|
| 1481 | echo "IGCM_sys_ncea : erreur ${@}." |
---|
| 1482 | IGCM_debug_Exit "ncea" |
---|
| 1483 | fi |
---|
[257] | 1484 | |
---|
[544] | 1485 | IGCM_debug_PopStack "IGCM_sys_ncea" |
---|
[257] | 1486 | } |
---|
| 1487 | |
---|
| 1488 | function IGCM_sys_ncecat { |
---|
[544] | 1489 | IGCM_debug_PushStack "IGCM_sys_ncecat" -- $@ |
---|
| 1490 | if ( $DEBUG_sys ) ; then |
---|
| 1491 | echo "IGCM_sys_ncecat :" $@ |
---|
| 1492 | fi |
---|
| 1493 | ncecat $@ |
---|
| 1494 | if [ $? -gt 0 ] ; then |
---|
| 1495 | echo "IGCM_sys_ncecat : erreur ${@}." |
---|
| 1496 | IGCM_debug_Exit "ncecat" |
---|
| 1497 | fi |
---|
[257] | 1498 | |
---|
[544] | 1499 | IGCM_debug_PopStack "IGCM_sys_ncecat" |
---|
[257] | 1500 | } |
---|
| 1501 | |
---|
| 1502 | function IGCM_sys_ncflint { |
---|
[544] | 1503 | IGCM_debug_PushStack "IGCM_sys_ncflint" -- $@ |
---|
| 1504 | if ( $DEBUG_sys ) ; then |
---|
| 1505 | echo "IGCM_sys_ncflint :" $@ |
---|
| 1506 | fi |
---|
| 1507 | ncflint $@ |
---|
| 1508 | if [ $? -gt 0 ] ; then |
---|
| 1509 | echo "IGCM_sys_ncflint : erreur ${@}." |
---|
| 1510 | IGCM_debug_Exit "ncflint" |
---|
| 1511 | fi |
---|
[257] | 1512 | |
---|
[544] | 1513 | IGCM_debug_PopStack "IGCM_sys_ncflint" |
---|
[257] | 1514 | } |
---|
| 1515 | |
---|
| 1516 | function IGCM_sys_ncks { |
---|
[544] | 1517 | IGCM_debug_PushStack "IGCM_sys_ncks" -- $@ |
---|
| 1518 | if ( $DEBUG_sys ) ; then |
---|
| 1519 | echo "IGCM_sys_ncks :" $@ |
---|
| 1520 | fi |
---|
| 1521 | ncks $@ |
---|
| 1522 | if [ $? -gt 0 ] ; then |
---|
| 1523 | echo "IGCM_sys_ncks : erreur ${@}." |
---|
| 1524 | IGCM_debug_Exit "ncks" |
---|
| 1525 | fi |
---|
[257] | 1526 | |
---|
[544] | 1527 | IGCM_debug_PopStack "IGCM_sys_ncks" |
---|
[257] | 1528 | } |
---|
| 1529 | |
---|
| 1530 | function IGCM_sys_ncpdq { |
---|
[544] | 1531 | IGCM_debug_PushStack "IGCM_sys_ncpdq" -- $@ |
---|
| 1532 | if ( $DEBUG_sys ) ; then |
---|
| 1533 | echo "IGCM_sys_ncpdq :" $@ |
---|
| 1534 | fi |
---|
| 1535 | ncpdq $@ |
---|
| 1536 | if [ $? -gt 0 ] ; then |
---|
| 1537 | echo "IGCM_sys_ncpdq : erreur ${@}." |
---|
| 1538 | IGCM_debug_Exit "ncpdq" |
---|
| 1539 | fi |
---|
[257] | 1540 | |
---|
[544] | 1541 | IGCM_debug_PopStack "IGCM_sys_ncpdq" |
---|
[257] | 1542 | } |
---|
| 1543 | |
---|
| 1544 | function IGCM_sys_ncra { |
---|
[544] | 1545 | IGCM_debug_PushStack "IGCM_sys_ncra" -- $@ |
---|
| 1546 | if ( $DEBUG_sys ) ; then |
---|
| 1547 | echo "IGCM_sys_ncra :" $@ |
---|
| 1548 | fi |
---|
| 1549 | ncra $@ |
---|
| 1550 | if [ $? -gt 0 ] ; then |
---|
| 1551 | echo "IGCM_sys_ncra : erreur ${@}." |
---|
| 1552 | IGCM_debug_Exit "ncra" |
---|
| 1553 | fi |
---|
[257] | 1554 | |
---|
[544] | 1555 | IGCM_debug_PopStack "IGCM_sys_ncra" |
---|
[257] | 1556 | } |
---|
| 1557 | |
---|
| 1558 | function IGCM_sys_ncrcat { |
---|
[544] | 1559 | IGCM_debug_PushStack "IGCM_sys_ncrcat" -- $@ |
---|
| 1560 | if ( $DEBUG_sys ) ; then |
---|
| 1561 | echo "IGCM_sys_ncrcat :" $@ |
---|
| 1562 | fi |
---|
| 1563 | ncrcat $@ |
---|
| 1564 | if [ $? -gt 0 ] ; then |
---|
| 1565 | echo "IGCM_sys_ncrcat : erreur ${@}." |
---|
[257] | 1566 | # IGCM_debug_Exit "ncrcat" |
---|
[544] | 1567 | fi |
---|
[257] | 1568 | |
---|
[544] | 1569 | IGCM_debug_PopStack "IGCM_sys_ncrcat" |
---|
[257] | 1570 | } |
---|
| 1571 | |
---|
| 1572 | function IGCM_sys_ncrename { |
---|
[544] | 1573 | IGCM_debug_PushStack "IGCM_sys_ncrename" -- $@ |
---|
| 1574 | if ( $DEBUG_sys ) ; then |
---|
| 1575 | echo "IGCM_sys_ncrename :" $@ |
---|
| 1576 | fi |
---|
| 1577 | ncrename $@ |
---|
| 1578 | if [ $? -gt 0 ] ; then |
---|
| 1579 | echo "IGCM_sys_ncrename : erreur ${@}." |
---|
| 1580 | IGCM_debug_Exit "ncrename" |
---|
| 1581 | fi |
---|
[257] | 1582 | |
---|
[544] | 1583 | IGCM_debug_PopStack "IGCM_sys_ncrename" |
---|
[257] | 1584 | } |
---|
| 1585 | |
---|
| 1586 | function IGCM_sys_ncwa { |
---|
[544] | 1587 | IGCM_debug_PushStack "IGCM_sys_ncwa" -- $@ |
---|
| 1588 | if ( $DEBUG_sys ) ; then |
---|
| 1589 | echo "IGCM_sys_ncwa :" $@ |
---|
| 1590 | fi |
---|
| 1591 | ncwa $@ |
---|
| 1592 | if [ $? -gt 0 ] ; then |
---|
| 1593 | echo "IGCM_sys_ncwa : erreur ${@}." |
---|
| 1594 | IGCM_debug_Exit "ncwa" |
---|
| 1595 | fi |
---|
[257] | 1596 | |
---|
[544] | 1597 | IGCM_debug_PopStack "IGCM_sys_ncwa" |
---|
[257] | 1598 | } |
---|
| 1599 | |
---|
[285] | 1600 | ############################################################## |
---|
| 1601 | # CDO OPERATOR |
---|
| 1602 | |
---|
| 1603 | function IGCM_sys_cdo { |
---|
[544] | 1604 | IGCM_debug_PushStack "IGCM_sys_cdo" -- $@ |
---|
| 1605 | if ( $DEBUG_sys ) ; then |
---|
| 1606 | echo "IGCM_sys_cdo :" $@ |
---|
| 1607 | fi |
---|
| 1608 | \cdo $@ |
---|
| 1609 | if [ $? -gt 0 ] ; then |
---|
| 1610 | echo "IGCM_sys_cdo : erreur ${@}." |
---|
| 1611 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 1612 | return 1 |
---|
| 1613 | else |
---|
| 1614 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 1615 | return 0 |
---|
| 1616 | fi |
---|
[285] | 1617 | |
---|
[544] | 1618 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
[285] | 1619 | } |
---|
| 1620 | |
---|
[257] | 1621 | ############################################################ |
---|
| 1622 | # Activate Running Environnment Variables |
---|
| 1623 | |
---|
| 1624 | function IGCM_sys_activ_variables { |
---|
[544] | 1625 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
| 1626 | if ( $DEBUG_sys ) ; then |
---|
| 1627 | echo "IGCM_sys_activ_variables" |
---|
| 1628 | fi |
---|
| 1629 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
[257] | 1630 | } |
---|
| 1631 | |
---|
| 1632 | ############################################################ |
---|
| 1633 | # Desactivate Running Environnment Variables |
---|
| 1634 | |
---|
| 1635 | function IGCM_sys_desactiv_variables { |
---|
[544] | 1636 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
| 1637 | if ( $DEBUG_sys ) ; then |
---|
| 1638 | echo "IGCM_sys_desactiv_variables" |
---|
| 1639 | fi |
---|
| 1640 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
[257] | 1641 | } |
---|
| 1642 | |
---|
| 1643 | ############################################################ |
---|
| 1644 | # Build run file |
---|
| 1645 | |
---|
| 1646 | function IGCM_sys_build_run_file { |
---|
[544] | 1647 | IGCM_debug_PushStack "IGCM_sys_build_run_file" |
---|
| 1648 | if ( $DEBUG_sys ) ; then |
---|
| 1649 | echo "IGCM_sys_build_run_file" |
---|
| 1650 | fi |
---|
| 1651 | IGCM_debug_PopStack "IGCM_sys_build_run_file" |
---|
[257] | 1652 | } |
---|