#!/bin/ksh

#**************************************************************
# Author: Sebastien Denvil, Martial Mancip
# Contact: Martial.Mancip__at__ipsl.jussieu.fr
# $Revision::                                          $ Revision of last commit
# $Author::                                            $ Author of last commit
# $Date::                                              $ Date of last commit
# IPSL (2006)
#  This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
#
#**************************************************************

#=========================================================
# The documentation of this file can be automatically generated
# if you use the prefix #D- for comments to be extracted. 
# Extract with command: cat lib* | grep "^#D-" | cut -c "4-"
#=========================================================

#D-#==================================================
#D-LibIGCM_sys for Mercure SX8-R
#D-#==================================================
#D-
#D- This ksh library if a layer under some usefull 
#D-environment variables and shell commands.
#D-All those definitions depend on host particularities.
#D-It manages a stack mechanism and test validity of operations.
#D-All function described bellow must be prefixed by IGCM_sys.

#====================================================
# libIGCM_sys PARAMETERS
#====================================================

# gawk specific location on SX9
export PATH=/applications/gawk-3.0.4/bin:${PATH}

#====================================================
# set DEBUG_sys to true to output calls of function
typeset -r DEBUG_sys=${DEBUG_sys:=true}

#====================================================
# Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get)
typeset -r DRYRUN=${DRYRUN:=0}

# YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE !
# -------------------------------------------------------------------------------------
# | DRYRUN=  |  Date computations, | sys_Get    |  Exe    | sys_Put_Out; sys_Put_Rest |
# |          |  Cp/Exe param files |            |  Chmod  |                           |
# |          |      Qsub           |            |         |                           |
# -------------------------------------------------------------------------------------
# |    0     |       yes           |    yes     |  yes    |      yes                  |
# -------------------------------------------------------------------------------------
# |    1     |       yes           |    yes     |  yes    |      no                   |
# -------------------------------------------------------------------------------------
# |    2     |       yes           |    yes     |  no     |      no                   |
# -------------------------------------------------------------------------------------
# |    3     |       yes           |    no      |  no     |      no                   |
# -------------------------------------------------------------------------------------

#=====================================================
# Global Variables :
#=====================================================
# Language : "fr" or "en"
typeset -r MYLANG="fr"

#=====================================================
# Host and user names
# $hostname ou hostname
typeset  HOST=${HOST:=$( hostname )}
# $username ou whoami
typeset  LOGIN=${LOGIN:=$( whoami )}
# $hostname of the MASTER job
typeset -r MASTER=mercure

#D-
#D-#==================================================
#D-Program used in libIGCM
#D-#==================================================

# rsync with path
typeset -r RSYNC=/home/cont003/p86denv/SX_RSYNC/bin/rsync
# RSYNC_opt args to rsync
typeset -r RSYNC_opt="-va"
# ie storage filesystem
typeset -r RHOST=mercure

#====================================================
# Host specific DIRECTORIES
#====================================================

#====================================================
#- R_EXE   (==> BIN_DIR = ${MODIPSL}/bin )
typeset -r R_EXE="${MODIPSL}/bin"

#====================================================
#- SUBMIT_DIR : submission dir
typeset SUBMIT_DIR=${SUBMIT_DIR:=${PBS_O_WORKDIR}}

#====================================================
#- ARCHIVE
typeset -r ARCHIVE=${DMFDIR}

# ============ CESIUM START ============ #

#====================================================
#- Mirror libIGCM from mercure to cesium if needed
#ROOTSYS=$( echo ${libIGCM} | gawk -F"/" '{print $2}' )
#if [ ! ${ROOTSYS} = "home" ] ; then
#    typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true}
#else
#    typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false}
#fi

#====================================================
#- libIGCM_POST
#if ( ${MirrorlibIGCM} ) ; then
#    PATHlibIGCM=$( echo ${libIGCM} | gawk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" )
#    typeset -r libIGCM_POST=${HOME}/MIRROR/${PATHlibIGCM}/libIGCM
#else
#    typeset -r libIGCM_POST=${libIGCM}
#fi

# ============ CESIUM  END  ============ #

#====================================================
#- Mirror libIGCM from mercure to cesium if needed
typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false}

#====================================================
#- libIGCM_POST
typeset -r libIGCM_POST=${libIGCM}

#====================================================
#- IN
typeset -r R_IN=${R_IN:=/dmnfs/cont003/p86ipsl/IGCM}
typeset -r R_IN_ECMWF=${R_IN:=/dmnfs/cont003/p24data}

#====================================================
#- OUT
typeset -r R_OUT=${ARCHIVE}/IGCM_OUT

#====================================================
#- OUT_POST
typeset -r R_OUT_POST=${SCRATCHDIR}/IGCM_OUT

#====================================================
#- RUN_DIR_PATH : Temporary working directory (=> TMP)
typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${LOCALTMPDIR}}

#====================================================
#- BIG_DIR : BIG_DIR to store files waiting for rebuild
typeset -r BIG_DIR=${BIG_DIR:=${SCRATCHDIR}/REBUILD}

#====================================================
#- HOST_MPIRUN_COMMAND
typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="mpirun"}

#====================================================
#- Max number of arguments passed to nco operator or demigration command
UNIX_MAX_LIMIT=360

#D-#==================================================
#D-function IGCM_sys_RshArchive
#D-* Purpose: Archive rsh command
#D-* Examples:
#D-
function IGCM_sys_RshArchive {
    IGCM_debug_PushStack "IGCM_sys_RshArchive" $@
    /bin/ksh <<-EOF
${@}
EOF
    if [ $? -gt 0 ] ; then
	echo "IGCM_sys_RshArchive : erreur."
	IGCM_debug_Exit "IGCM_sys_RshArchive"
    fi
    IGCM_debug_PopStack "IGCM_sys_RshArchive"
}

#D-#==================================================
#D-function IGCM_sys_RshPost
#D-* Purpose: Post-process rsh command
#D-* Examples:
#D-
function IGCM_sys_RshPost {
    IGCM_debug_PushStack "IGCM_sys_RshPost" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_RshPost :" $@
    fi

# ============ CESIUM START ============ #
#    typeset NB_ESSAI DELAI status
#    #nombre d'essai avant abandon
#    NB_ESSAI=5
#    #temps entre chaque essai
#    DELAI=10
#    i=0
#    while [ $i -ne $NB_ESSAI ] ; do
#        ssh -t mercure ssh cesium /bin/ksh ${@} 2>/dev/null
#        status=$?
#        if [ ${status} -ne 0 ];
#        then
#            sleep $DELAI
#        else
#            break
#        fi
#        let i=$i+1
#    done 
# ============ CESIUM  END  ============ #


    /bin/ksh ${@}
    if [ $? -gt 0 ] ; then
	echo "IGCM_sys_RshPost : erreur."
	IGCM_debug_Exit "IGCM_sys_RshPost"
    fi
    IGCM_debug_PopStack "IGCM_sys_RshPost"
}

#D-#==================================================
#D-function IGCM_sys_SendMail
#D-* Purpose: Send mail when simulation is over
#D-* Examples:
#D-
function IGCM_sys_SendMail {
    IGCM_debug_PushStack "IGCM_sys_SendMail" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_SendMail :" $@
    fi

    ssh mercure /bin/ksh <<-EOF
    export LOGIN=${LOGIN}
    export config_UserChoices_JobName=${config_UserChoices_JobName}
    export config_UserChoices_MailName=${config_UserChoices_MailName}
    export DateBegin=${DateBegin}
    export DateEnd=${DateEnd}
    export R_SAVE=${R_SAVE}
    export SUBMIT_DIR=${SUBMIT_DIR}

    cat  << END_MAIL > job_end.mail
Dear ${LOGIN},

  Simulation ${config_UserChoices_JobName} is finished on supercomputer `hostname`.
  Job started : ${DateBegin}
  Job ended   : ${DateEnd}
  Output files are available in ${R_SAVE}
  Script files and Script Outputs are available in ${SUBMIT_DIR}
END_MAIL

    if [ ! -z ${config_UserChoices_MailName} ] ; then
       mailx -s "${config_UserChoices_JobName} completed" ${config_UserChoices_MailName} <  job_end.mail
    elif [ -f ~/.forward ] ; then
       mailx -s "${config_UserChoices_JobName} completed" $( cat ~/.forward ) < job_end.mail
    fi

    sleep 10
    rm -f job_end.mail
EOF

    if [ $? -gt 0 ] ; then
	echo "IGCM_sys_SendMail : erreur."
	IGCM_debug_Exit "IGCM_sys_SendMail"
    fi
    IGCM_debug_PopStack "IGCM_sys_SendMail"
}

#D-#==================================================
#D-function IGCM_sys_Mkdir
#D-* Purpose: Master locale mkdir command
#D-* Examples:
#D-
function IGCM_sys_Mkdir {
    IGCM_debug_PushStack "IGCM_sys_Mkdir" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Mkdir :" $@
    fi
    if [ ! -d ${1} ]; then
	\mkdir -p $1
	if [ $? -gt 0 ] ; then
	    echo "IGCM_sys_Mkdir : erreur."
	    IGCM_debug_Exit "IGCM_sys_Mkdir"
	fi
    fi
    # vérification :
    if [ ! -d ${1} ] ; then
	echo "IGCM_sys_Mkdir : erreur."
	IGCM_debug_Exit "IGCM_sys_Mkdir"
    fi
    IGCM_debug_PopStack "IGCM_sys_Mkdir"
}

#D-#==================================================
#D-function IGCM_sys_MkdirArchive
#D-* Purpose: Mkdir on Archive
#D-* Examples:
#D-
function IGCM_sys_MkdirArchive {
    IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_MkdirArchive :" $@
    fi
    #- creation de repertoire sur le serveur fichier
    if [ ! -d ${1} ]; then 
	\mkdir -p $1
	if [ $? -gt 0 ] ; then
	    echo "IGCM_sys_MkdirArchive : erreur."
	    IGCM_debug_Exit "IGCM_sys_MkdirArchive"
	fi
    fi
    IGCM_debug_PopStack "IGCM_sys_MkdirArchive"
}

#D-#==================================================
#D-function IGCM_sys_MkdirWork
#D-* Purpose: Mkdir on Work
#D-* Examples:
#D-
function IGCM_sys_MkdirWork {
    IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_MkdirWork :" $@
    fi
    #- creation de repertoire sur le serveur fichier
    if [ ! -d ${1} ]; then 
	\mkdir -p $1
	if [ $? -gt 0 ] ; then
	    echo "IGCM_sys_MkdirWork : erreur."
	    IGCM_debug_Exit "IGCM_sys_MkdirWork"
	fi
    fi
    IGCM_debug_PopStack "IGCM_sys_MkdirWork"
}

#D-#==================================================
#D-function IGCM_sys_Cd
#D-* Purpose: master cd command
#D-* Examples:
#D-
function IGCM_sys_Cd {
    IGCM_debug_PushStack "IGCM_sys_Cd" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Cd :" $@
    fi
    \cd $1
    if [ $? -gt 0 ] ; then
	echo "IGCM_sys_Cd : erreur."
	IGCM_debug_Exit "IGCM_sys_Cd"
    fi
    IGCM_debug_PopStack "IGCM_sys_Cd"
}

#D-#==================================================
#D-function IGCM_sys_Chmod
#D-* Purpose: Chmod
#D-* Examples:
#D-
function IGCM_sys_Chmod {
    IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Chmod :" $@
    fi
    if [ $DRYRUN -le 1 ]; then
	\chmod $@
	if [ $? -gt 0 ] ; then
	    echo "IGCM_sys_Chmod : erreur."
	    IGCM_debug_Exit "IGCM_sys_Chmod"
	fi
    else
	( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
    fi
    IGCM_debug_PopStack "IGCM_sys_Chmod"
}

#D-#==================================================
#D-function IGCM_sys_FileSize
#D-* Purpose: Filesize
#D-* Examples:
#D-
function IGCM_sys_FileSize {
    IGCM_debug_PushStack "IGCM_sys_FileSize" $@

    typeset sizeF
    set +A sizeF -- $( ls -la ${1} )
    if [ $? -gt 0 ] ; then
	IGCM_debug_Exit "IGCM_sys_FileSize"
    fi
    eval ${2}=${sizeF[4]}

    IGCM_debug_PopStack "IGCM_sys_FileSize"
}

#D-#==================================================
#D-function IGCM_sys_TestDir
#D-* Purpose: Test Directory that must exists
#D-* Examples:
#D-
function IGCM_sys_TestDir {
    IGCM_debug_PushStack "IGCM_sys_TestDir" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_TestDir :" $@
    fi
    typeset ExistFlag
    ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 )
    IGCM_debug_PopStack "IGCM_sys_TestDir"

    return ${ExistFlag}
}

#D-#==================================================
#D-function IGCM_sys_TestDirArchive
#D-* Purpose: Test Directory that must exists on Archive
#D-* Examples:
#D-
function IGCM_sys_TestDirArchive {
    IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_TestDirArchive :" $@
    fi
    typeset ExistFlag
    ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 )
    IGCM_debug_PopStack "IGCM_sys_TestDirArchive"

    return ${ExistFlag}
}

#D-#==================================================
#D-function IGCM_sys_TestFileArchive
#D-* Purpose: Test file that must NOT EXISTS on Archive
#D-* Examples:
#D-
function IGCM_sys_TestFileArchive {
    IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@
    typeset ExistFlag
    ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 )
    IGCM_debug_PopStack "IGCM_sys_TestFileArchive"

    return ${ExistFlag}
}

#D-#==================================================
#D-function IGCM_sys_CountFileArchive
#D-* Purpose: Count files on Archive filesystem
#D-* Examples:
#D-
function IGCM_sys_CountFileArchive {
    IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@
    ls ${@} 2>/dev/null | wc -l
    if [ $? -gt 0 ] ; then
	echo "IGCM_sys_CountFileArchive : erreur."
    fi
    IGCM_debug_PopStack "IGCM_sys_CountFileArchive"
}

#D-#==================================================
#D-function IGCM_sys_Tree
#D-* Purpose: Tree directories with files on ${ARCHIVE}
#D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT}
#D-
function IGCM_sys_Tree {
    IGCM_debug_PushStack "IGCM_sys_Tree" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Tree :" $@
    fi

    \ls -lR ${@}

    IGCM_debug_PopStack "IGCM_sys_Tree"
}

#D-#==================================================
#D-function IGCM_sys_Tar
#D-* Purpose: master un-tar command
#D-* Examples:
#D-
function IGCM_sys_Tar {
    IGCM_debug_PushStack "IGCM_sys_Tar" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Tar :" $@
    fi
    \tar xvf $1
    if [ $? -gt 0 ] ; then
	echo "IGCM_sys_Tar : erreur."
	IGCM_debug_Exit "IGCM_sys_Tar"
    fi
    IGCM_debug_PopStack "IGCM_sys_Tar"
}

#D-#==================================================
#D-function IGCM_sys_UnTar
#D-* Purpose: master un-tar command
#D-* Examples:
#D-
function IGCM_sys_UnTar {
    IGCM_debug_PushStack "IGCM_sys_UnTar" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_UnTar :" $@
    fi
    \tar xvf $1
    if [ $? -gt 0 ] ; then
	echo "IGCM_sys_UnTar : erreur."
	IGCM_debug_Exit "IGCM_sys_UnTar"
    fi
    IGCM_debug_PopStack "IGCM_sys_UnTar"
}

#D-#==================================================
#D-function IGCM_sys_Qsub
#D-* Purpose: Qsub new job
#D-* Examples:
#D-
function IGCM_sys_Qsub {
    IGCM_debug_PushStack "IGCM_sys_Qsub" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Qsub :" $@
    fi
    /usr/bin/nqsII/qsub -o ${Script_Output} -N ${config_UserChoices_JobName}.${CumulPeriod} < $1
    if [ $? -gt 0 ] ; then
	echo "IGCM_sys_Qsub : erreur -o ${Script_Output} -N ${config_UserChoices_JobName}.${CumulPeriod} $@."
	IGCM_debug_Exit "IGCM_sys_Qsub"
    fi
    IGCM_debug_PopStack "IGCM_sys_Qsub"
}

#D-#==================================================
#D-function IGCM_sys_QsubPost
#D-* Purpose: Qsub new job on scalaire
#D-* Examples:
#D-
function IGCM_sys_QsubPost {
    IGCM_debug_PushStack "IGCM_sys_QsubPost" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_QsubPost :" $@
    fi
    # ============ CESIUM START ============ #
    #/usr/local/bin/ccc_msub -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.e.out -E "-v ${listVarEnv}" ${libIGCM_POST}/$1.job
    # ============ CESIUM  END  ============ #
    /usr/bin/nqsII/qsub -o ${POST_DIR}/${Script_Post_Output}.out ${libIGCM}/$1.job -v ${listVarEnv}
    if [ $? -gt 0 ] ; then
	echo "IGCM_sys_QsubPost : erreur " $@
	IGCM_debug_Exit "IGCM_sys_QsubPost"
    fi
    IGCM_debug_PopStack "IGCM_sys_QsubPost"
}

#D-*************************
#D- File transfer functions 
#D-*************************
#D-

#D-#==================================================
#D-function IGCM_sys_Rsync_out
#D-* Purpose: treat return val of rsync
#D-* Examples: IGCM_sys_Rsync_out out_RET_rsync
#D-  Error values and explanations can depend on your system version.
function IGCM_sys_Rsync_out {
    RET=$1
    if [ ! $RET ] ; then
	echo "rsync error !"
    fi

    if [ $MYLANG = "fr" ]; then
	case $RET in
	    0)  return ;;
	    1)  echo "Erreur de rsync ; RERR_SYNTAX : "
		echo "Erreur de syntaxe ou d'utilisation."
		return;;
	    2)  echo "Erreur de rsync ; RERR_PROTOCOL : "
		echo "Incompatibilité de protocole."
		return;;
	    3)  echo "Erreur de rsync ; RERR_FILESELECT 3"
		echo "Erreurs  lors  de  la  sélection des fichiers d'entrée sortie et"
		echo "répertoires"
		return;;
	    4)  echo "Erreur de rsync ; RERR_UNSUPPORTED"
		echo "Action demandée non supportée : une tentative de manipulation de"
		echo "fichiers  64-bits  sur une plate-forme qui ne les supporte pas a"
		echo "été faite ; ou une option qui est supportée par le  client  mais"
		echo "pas par le serveur a été spécifiée."
		return;;
	    10) echo "Erreur de rsync ; RERR_SOCKETIO"
		echo "Erreur dans le socket d'entrée sortie"
		return;;
	    11) echo "Erreur de rsync ; RERR_FILEIO"
		echo "Erreur d'entrée sortie fichier"
		return;;
	    12) echo "Erreur de rsync ; RERR_STREAMIO"
		echo "Erreur dans flux de donnée du protocole rsync"
		return;;
	    13) echo "Erreur de rsync ; RERR_MESSAGEIO"
		echo "Erreur avec les diagnostics du programme"
		return;;
	    14) echo "Erreur de rsync ; RERR_IPC"
		echo "Erreur dans le code IPC"
		return;;
	    20) echo "Erreur de rsync ; RERR_SIGNAL"
		echo "SIGUSR1 ou SIGINT reçu"
		return;;
	    21) echo "Erreur de rsync ; RERR_WAITCHILD"
		echo "Une erreur retournée par waitpid()"
		return;;
	    22) echo "Erreur de rsync ; RERR_MALLOC"
		echo "Erreur lors de l'allocation des tampons de mémoire de coeur"
		return;;
	    23) echo ""
                echo "Erreur fichier inexistant"
		return;;
	    30) echo "Erreur de rsync ; RERR_TIMEOUT"
		echo "Temps d'attente écoulé dans l'envoi/réception de données"
		return;;
	    *)  echo "Erreur de rsync : code de retour de rsync inconnu :" $RET
		return;;
	esac
    elif [ $MYLANG = "en" ] ; then
	case $RET in
	    0)  return;;		
	    1)  echo "rsync error : Syntax or usage error "
		return;;
	    2)  echo "rsync error : Protocol incompatibility "
		return;;
	    3)  echo "rsync error : Errors selecting input/output files, dirs"
		return;;
	    4)  echo "rsync error : Requested action not supported: an attempt"
		echo "was made to manipulate 64-bit files on a platform that cannot support"
		echo "them; or an option was specified that is supported by the client and"
		echo "not by the server."
		return;;
	    5)  echo "rsync error : Error starting client-server protocol"
		return;;
	    10) echo "rsync error : Error in socket I/O "
		return;;
	    11) echo "rsync error : Error in file I/O "
		return;;
	    12) echo "rsync error : Error in rsync protocol data stream "
		return;;
	    13) echo "rsync error : Errors with program diagnostics "
		return;;
	    14) echo "rsync error : Error in IPC code "
		return;;
	    20) echo "rsync error : Received SIGUSR1 or SIGINT "
		return;;
	    21) echo "rsync error : Some error returned by waitpid() "
		return;;
	    22) echo "rsync error : Error allocating core memory buffers "
		return;;
	    23) echo "rsync error : Partial transfer due to error"
		return;;
	    24) echo "rsync error : Partial transfer due to vanished source files"
		return;;
	    30) echo "rsync error : Timeout in data send/receive "
		return;;
	    *)  echo "rsync error : return code of rsync unknown :" $RET
		return;;
	esac
    else
	echo "unknown language $MYLANG."
	return
    fi
}
    

#D-#==================================================
#D-function IGCM_sys_Miror_libIGCM
#D-* Purpose: Mirror libIGCM PATH and lib to cesium
#D-* Examples:
#D-
function IGCM_sys_Mirror_libIGCM {
    IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM"
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Mirror_libIGCM"
    fi

    typeset RET DEST

    mkdir -p ${HOME}/MIRROR/${PATHlibIGCM}

    echo ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} > out_rsync 2>&1
    ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} >> out_rsync 2>&1
    RET=$?

    if [ ${RET} -gt 0 ] ; then
	echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on cesium."
	cat out_rsync
    fi
    IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM"
}

#====================================================
#- Call IGCM_sys_Mirror_libIGCM now !
if ( $MirrorlibIGCM ) ; then
    IGCM_sys_Mirror_libIGCM
fi

#D-#==================================================
#D-function IGCM_sys_Cp
#D-* Purpose: generic cp
#D-* Examples:
#D-
function IGCM_sys_Cp {
    IGCM_debug_PushStack "IGCM_sys_Cp" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Cp :" $@
    fi

    typeset RET

    echo cp $@ > out_rsync 2>&1
    \cp $@ >> out_rsync 2>&1
    RET=$?

    if [ ${RET} -gt 0 ] ; then
	echo "IGCM_sys_Cp : error."
	cat out_rsync
	IGCM_debug_Exit "IGCM_sys_Cp"
     else
	 \rm out_rsync
    fi
    IGCM_debug_PopStack "IGCM_sys_Cp"
}

#D-#==================================================
#D-function IGCM_sys_Rm
#D-* Purpose: generic rm
#D-* Examples:
#D-
function IGCM_sys_Rm {
    IGCM_debug_PushStack "IGCM_sys_Rm" -- $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Rm :" $@
    fi

    typeset RET

    echo rm $@ > out_rsync 2>&1
    \rm $@ >> out_rsync 2>&1
    RET=$?

    if [ ${RET} -gt 0 ] ; then
	echo "IGCM_sys_Rm : error."
	cat out_rsync
	IGCM_debug_Exit "IGCM_sys_Rm"
    else
	\rm out_rsync
    fi
    IGCM_debug_PopStack "IGCM_sys_Rm"
}

#D-#==================================================
#D-function IGCM_sys_Mv
#D-* Purpose: generic move
#D-* Examples:
#D-
function IGCM_sys_Mv {
    IGCM_debug_PushStack "IGCM_sys_Mv" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Mv :" $@
    fi

    if [ $DRYRUN = 0 ]; then

        typeset RET
            
        echo mv $@ > out_rsync 2>&1
        \mv $@ >> out_rsync 2>&1
        RET=$?
    
        if [ ${RET} -gt 0 ] ; then
            echo "IGCM_sys_Mv : error in mv."
            cat out_rsync
            IGCM_debug_Exit "IGCM_sys_Mv"
	else
	    \rm out_rsync
        fi
    else
        ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
    fi

    IGCM_debug_PopStack "IGCM_sys_Mv"
}

#D-#==================================================
#D-function IGCM_sys_Put_Dir
#D-* Purpose: Copy a complete directory on $(ARCHIVE)
#D-* Examples:
#D-
function IGCM_sys_Put_Dir {
    IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Put_Dir :" $@
    fi
    if [ $DRYRUN = 0 ]; then
	if [ ! -d ${1} ] ; then
	    echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ."
	    IGCM_debug_PopStack "IGCM_sys_Put_Dir"
	    return
	fi

	typeset RET

	# Only if we use rsync
	#IGCM_sys_TestDirArchive $( dirname $2 )
	#
	#USUAL WAY
	\cp -r $1 $2 > out_rsync 2>&1
  	RET=$?

	if [ ${RET} -gt 0 ] ; then
	    echo "IGCM_sys_Put_Dir : error."
	    cat out_rsync
	    IGCM_debug_Exit "IGCM_sys_Put_Dir"
	else
	    \rm out_rsync
	fi
    else
	( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
    fi
    IGCM_debug_PopStack "IGCM_sys_Put_Dir"
}

#D-#==================================================
#D-function IGCM_sys_Get_Dir
#D-* Purpose: Copy a complete directory from $(ARCHIVE)
#D-* Examples:
#D-
function IGCM_sys_Get_Dir {
    IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Get_Dir :" $@
    fi
    if [ $DRYRUN = 0 ]; then
	if [ ! -d ${1} ] ; then
	    echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ."
	    IGCM_debug_PopStack "IGCM_sys_Get_Dir"
	    return
	fi

	typeset RET

	# Only if we use rsync
	#IGCM_sys_TestDirArchive $( dirname $2 )
	#
	#USUAL WAY
	\cp -r $1 $2 > out_rsync 2>&1
  	RET=$?

	if [ ${RET} -gt 0 ] ; then
	    echo "IGCM_sys_Get_Dir : error."
	    cat out_rsync
	    IGCM_debug_Exit "IGCM_sys_Get_Dir"
	else
	    \rm out_rsync
	fi
    else
	( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
    fi
    IGCM_debug_PopStack "IGCM_sys_Get_Dir"
}

#D-#==================================================
#D-function IGCM_sys_Put_Rest
#D-* Purpose: Put computied restarts on $(ARCHIVE).
#D-           File and target directory must exist.
#D-* Examples:
#D-
function IGCM_sys_Put_Rest {
    IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Put_Rest :" $@
    fi
    if [ $DRYRUN = 0 ]; then
	if [ ! -f ${1} ] ; then
	    echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ."
	    IGCM_debug_Exit "IGCM_sys_Put_Rest"
	fi

	typeset RET
	#
	if [ X${JobType} = XRUN ] ; then
	    IGCM_sys_Chmod 444 ${1}
	fi
	#
	IGCM_sys_TestDirArchive $( dirname $2 )
	#
	# USUAL WAY
	putfer $1 $2 > out_rsync 2>&1
        RET=$?

# 	#RSYNC WITH NETWORK SSH CALL
# 	echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1
# 	${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1

#  	#RSYNC WITH NFS USE
#  	echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1
#  	${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1

#  	RET=$?
#  	IGCM_sys_Rsync_out $RET

#  	${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync
#  	(( RET=RET+$? ))

	if [ ${RET} -gt 0 ] ; then
	    echo "IGCM_sys_Put_Rest : error."
	    cat out_rsync
	    IGCM_debug_Exit "IGCM_sys_Put_Rest"
	else
	    \rm out_rsync
	fi
    else
	( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
    fi
    IGCM_debug_PopStack "IGCM_sys_Put_Rest"
}

#D-#==================================================
#D-function IGCM_sys_Put_Out
#D-* Purpose: Copy a file on $(ARCHIVE) after have chmod it in readonly
#D-* Examples:
#D-
function IGCM_sys_Put_Out {
    IGCM_debug_PushStack "IGCM_sys_Put_Out" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Put_Out :" $@
    fi
    if [ $DRYRUN = 0 ]; then
	if [ ! -f ${1} ] ; then
	    echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ."
	    IGCM_debug_PopStack "IGCM_sys_Put_Out"
	    return 1
	fi
	#
	IGCM_sys_MkdirArchive $( dirname $2 )
        #
	typeset RET

	#=====================================================
        #         COMMENT OUT DOUBLE COPY ON SCRATCHDIR
        #=====================================================

	#echo ${2} | grep "${R_OUT}" > /dev/null 2>&1
	#if [ $? -eq 0 ] ; then
	#    typeset WORKPATH FILEPATH
	#    WORKPATH=$( dirname $2 | sed -e "s|${R_OUT}|${R_OUT_SCR}|" )
	#    IGCM_sys_MkdirWork ${WORKPATH} 
	#    FILEPATH=${WORKPATH}/$( basename $2 )
        #    #
	#    IGCM_sys_Cp ${1} ${FILEPATH}
	#fi

	if [ X${JobType} = XRUN ] ; then
	    if [ X${3} = X ] ; then
		IGCM_sys_Chmod 444 ${1}
	    fi
	fi
	#
        # USUAL WAY
	putfer $1 $2 > out_rsync 2>&1
	RET=$?

# 	#RSYNC WITH NETWORK SSH CALL
# 	echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1
# 	${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1

#  	#RSYNC WITH NFS USE
#  	echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1
#  	${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1

#  	RET=$?
#  	IGCM_sys_Rsync_out $RET

#  	${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync
#  	(( RET=RET+$? ))

	if [ ${RET} -gt 0 ] ; then
	    echo "IGCM_sys_Put_Out : error."
	    cat out_rsync
	    IGCM_debug_Exit "IGCM_sys_Put_Out"
	else
	    \rm out_rsync
	fi
    else
	( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
    fi
    IGCM_debug_PopStack "IGCM_sys_Put_Out"
    return 0
}

#D-#==================================================
#D-function IGCM_sys_Get
#D-* Purpose: Get a file from ${ARCHIVE}
#D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX
#D-            IGCM_sys_Get /l Array_contain_myfiles /destpath/
function IGCM_sys_Get {
    IGCM_debug_PushStack "IGCM_sys_Get" $@

    typeset DEST RET dm_liste ifile target file_work 

    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_Get :" $@
    fi
    if [ $DRYRUN -le 2 ]; then
	if [ X${1} = X'/l' ] ; then
            # test if the first file is present in the old computation :
	    eval set +A dm_liste \${${2}}
	else
	    eval set +A dm_liste ${1}
	fi
	eval DEST=\${${#}}

	#=====================================================
        #         COMMENT OUT DOUBLE COPY ON SCRATCHDIR
        #=====================================================

	# Is it an R_OUT file (not R_IN) ?
	#echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1
	#if [ $? -eq 0 ] ; then
	#    # Yes  ? then we try to get it in SCRATCHDIR
	#    set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_OUT_SCR}|" )
	#    if [ -f ${file_work[0]} ] ; then
	#	IGCM_sys_Cp ${file_work[*]} ${DEST}
	#	IGCM_debug_PopStack "IGCM_sys_Get"
	#	return
	#    fi
	#fi

	# test if the (first) file is present in the old computation :
	IGCM_sys_TestFileArchive ${dm_liste[0]}
	RET=$?
        if [ ${RET} -gt 0 ] ; then
	    echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ."
	    IGCM_debug_Exit "IGCM_sys_Get"
	    IGCM_debug_PopStack "IGCM_sys_Get"
	    return
	fi

	dmget ${dm_liste[*]} > out_rsync 2>&1
  	RET=$?
  	if [ ${RET} -gt 0 ] ; then
  	    echo "IGCM_sys_Get : demigration error."
  	    cat out_rsync
  	    IGCM_debug_Exit "IGCM_sys_Get"
  	fi

        #USUAL WAY
	if [ X${1} = X'/l' ] ; then
	    (( RET=0 ))
	    for target in ${dm_liste[*]} ; do
		local_file=$( basename ${target} )
		\cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1
		(( RET = RET + $? ))
	    done
	else
	    \cp ${dm_liste} ${DEST} >> out_rsync 2>&1
	    RET=$?
	fi

# 	#RSYNC WITH NETWORK SSH CALL
# 	echo ${RSYNC} ${RSYNC_opt} -e ssh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1
# 	${RSYNC} ${RSYNC_opt} -e ssh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1

#  	#RSYNC WITH NFS USE
#  	echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1
#  	${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1

# 	RET=$?
#  	IGCM_sys_Rsync_out $RET

#  	${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync
#  	(( RET=RET+$? ))

	if [ ${RET} -gt 0 ] ; then
	    echo "IGCM_sys_Get : copy error."
	    cat out_rsync
	    IGCM_debug_Exit "IGCM_sys_Get"
	else
	    \rm out_rsync
	fi
    else
	( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
    fi
    IGCM_debug_PopStack "IGCM_sys_Get"
}

############################################################## A FINIR !!

#D-#==================================================
#D-function IGCM_sys_GetDate_FichWork
#D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK
#D-* Examples:
#D-
function IGCM_sys_GetDate_FichWork {
    IGCM_debug_PushStack "IGCM_sys_FichWork" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_GetDate_FichWork :" $@
    fi
    # donne la date filesys d'un fichier sur la machine work
    IGCM_debug_PopStack "IGCM_sys_FichWork"
}

#D-#==================================================
#D-function IGCM_sys_GetDate_FichArchive
#D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE 
#D-* Examples:
#D-
function IGCM_sys_GetDate_FichArchive {
    IGCM_debug_PushStack "IGCM_sys_FichArchive" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_GetDate_FichArchive :" $@
    fi
    IGCM_debug_PopStack "IGCM_sys_FichArchive"
}

##############################################################
# REBUILD OPERATOR

function IGCM_sys_rebuild {
    IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_rebuild :" $@
    fi
    /home/cont003/p86ipsl/SX8/bin/rebuild -f -o $@
    if [ $? -gt 0 ] ; then
       echo "IGCM_sys_rebuild : erreur ${@}."
       IGCM_debug_Exit "rebuild"
    fi

    IGCM_debug_PopStack "IGCM_sys_rebuild"
}

############################################################
# Activate Running Environnment Variables

function IGCM_sys_activ_variables {
    IGCM_debug_PushStack "IGCM_sys_activ_variables"
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_activ_variables"
    fi

# --------------------------------------------------------------------
#D- MPI specifications
# --------------------------------------------------------------------

#D-- MPISUSPEND
    export MPISUSPEND=${MPISUSPEND:=OFF}

#D-- MPIPROGINF #other choices : ALL_DETAIL2
    export MPIPROGINF=ALL
#D- activate ftrace (with -ftrace)
    export F_FTRACE=YES
#D- communication information (with -ftrace)
    export MPICOMMINF=DETAIL

# --------------------------------------------------------------------
#D- Other specifications
# --------------------------------------------------------------------

#D- max number of character/line in output job
    export F_SYSLEN=5000
#D- number of error that can be admitted on the NEC
    export F_ERRCNT=0
#D- global performance
    export F_PROGINF=DETAIL

#D- I/O performance (FORTRAN I/O only not netCDF)
    export F_FILEINF=${F_FILEINF:=NO}
#D- netCDF I/O performance
    export NC_FILEINF=${NC_FILEINF:=NO}

    IGCM_debug_PopStack "IGCM_sys_activ_variables"
}

############################################################
# Desactivate Running Environnment Variables

function IGCM_sys_desactiv_variables {
    IGCM_debug_PushStack "IGCM_sys_desactiv_variables"
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_desactiv_variables"
    fi
# --------------------------------------------------------------------
#D- MPI specifications
# --------------------------------------------------------------------

#D-- MPIPROGINF
    export MPIPROGINF=NO

# --------------------------------------------------------------------
#D- Other specifications
# --------------------------------------------------------------------

#D- global performance
    export F_PROGINF=NO  

    IGCM_debug_PopStack "IGCM_sys_desactiv_variables"
}

############################################################
# Build run file

function IGCM_sys_build_run_file {
    IGCM_debug_PushStack "IGCM_sys_build_run_file" $@
    if ( $DEBUG_sys ) ; then
	echo "IGCM_sys_build_run_file " $@
    fi
    (( NUM_PROC_ATM = BATCH_NUM_PROC_TOT - 1 ))
    (( NUM_PROC_OASIS = BATCH_NUM_PROC_TOT - NUM_PROC_ATM ))
    (( NUM_PROC_OCE = BATCH_NUM_PROC_TOT - NUM_PROC_ATM ))
    
    if [ $1 = MPI2 ]; then
	cat <<EOF > run_file
-p 1 -np 1 -e ./oasis
EOF
	(( NUM_PROCESS = BATCH_NUM_PROC_TOT + 1 ))
	config_UserChoices_JobRunOptions='"-max_np ${NUM_PROCESS} -f"'

    elif [ $1 = MPI1 ]; then
	cat <<EOF > run_file
-p $NUM_PROC_OASIS -e ./oasis
-p $NUM_PROC_ATM -e ./lmdz.x
-p $NUM_PROC_OCE -e ./opa.xx
EOF
 
    fi

    IGCM_debug_PopStack "IGCM_sys_build_run_file"
  
}