[222] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | #************************************************************** |
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[373] | 4 | # Author: Sebastien Denvil, Martial Mancip, Arnaud Caubel |
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| 5 | # Contact: Arnaud.Caubel__at__lsce.ipsl.fr |
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| 6 | # $Revision:: $ Revision of last commit |
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| 7 | # $Author:: $ Author of last commit |
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| 8 | # $Date:: $ Date of last commit |
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[222] | 9 | # IPSL (2006) |
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| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 11 | # |
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| 12 | #************************************************************** |
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| 13 | |
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| 14 | #========================================================= |
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| 15 | # The documentation of this file can be automatically generated |
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[623] | 16 | # if you use the prefix #D- for comments to be extracted. |
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[222] | 17 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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| 18 | #========================================================= |
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| 19 | |
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| 20 | #D-#================================================== |
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| 21 | #D-LibIGCM_sys for Titane |
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| 22 | #D-#================================================== |
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| 23 | #D- |
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[623] | 24 | #D- This ksh library if a layer under some usefull |
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[222] | 25 | #D-environment variables and shell commands. |
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| 26 | #D-All those definitions depend on host particularities. |
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| 27 | #D-It manages a stack mechanism and test validity of operations. |
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| 28 | #D-All function described bellow must be prefixed by IGCM_sys. |
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| 29 | |
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| 30 | #==================================================== |
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| 31 | # libIGCM_sys PARAMETERS |
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| 32 | #==================================================== |
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| 33 | |
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| 34 | #==================================================== |
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| 35 | # set DEBUG_sys to true to output calls of function |
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| 36 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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| 37 | |
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| 38 | #==================================================== |
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| 39 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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| 40 | typeset -r DRYRUN=${DRYRUN:=0} |
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| 41 | |
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| 42 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 43 | # ------------------------------------------------------------------------------------- |
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[719] | 44 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 45 | # | | Cp/Exe param files | | Chmod | | |
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| 46 | # | | Qsub | | | | |
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[222] | 47 | # ------------------------------------------------------------------------------------- |
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[719] | 48 | # | 0 | yes | yes | yes | yes | |
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[222] | 49 | # ------------------------------------------------------------------------------------- |
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[719] | 50 | # | 1 | yes | yes | yes | no | |
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[222] | 51 | # ------------------------------------------------------------------------------------- |
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[719] | 52 | # | 2 | yes | yes | no | no | |
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[222] | 53 | # ------------------------------------------------------------------------------------- |
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[719] | 54 | # | 3 | yes | no | no | no | |
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[222] | 55 | # ------------------------------------------------------------------------------------- |
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| 56 | |
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| 57 | #===================================================== |
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| 58 | # Global Variables : |
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| 59 | #===================================================== |
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| 60 | # Language : "fr" or "en" |
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| 61 | typeset -r MYLANG="fr" |
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| 62 | |
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| 63 | #===================================================== |
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[245] | 64 | # Host and user names |
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| 65 | # $hostname ou hostname |
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| 66 | typeset HOST=${HOST:=$( hostname )} |
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[222] | 67 | # $username ou whoami |
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[245] | 68 | typeset LOGIN=${LOGIN:=$( whoami )} |
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[222] | 69 | # $hostname of the MASTER job |
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[544] | 70 | typeset MASTER=titane |
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[222] | 71 | |
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| 72 | #D- |
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| 73 | #D-#================================================== |
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| 74 | #D-Program used in libIGCM |
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| 75 | #D-#================================================== |
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| 76 | |
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[742] | 77 | # Submit command |
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[747] | 78 | typeset SUBMIT=${SUBMIT:=ccc_msub} |
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[222] | 79 | # rsync with path |
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| 80 | typeset -r RSYNC=/usr/bin/rsync |
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| 81 | # RSYNC_opt args to rsync |
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| 82 | typeset -r RSYNC_opt="-va" |
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| 83 | # ie storage filesystem |
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[538] | 84 | typeset -r STOREHOST=${MASTER} |
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[222] | 85 | |
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| 86 | #==================================================== |
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[451] | 87 | # Source default environment |
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| 88 | #==================================================== |
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| 89 | . /etc/profile |
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| 90 | |
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| 91 | #==================================================== |
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[305] | 92 | # Set environment tools (ferret, nco, cdo) |
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| 93 | #==================================================== |
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[451] | 94 | . /home/cont003/p86ipsl/.atlas_env_titane_ksh |
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[648] | 95 | if ( [ X${LSB_QUEUE} = Xmono ] || [ X${LSB_QUEUE} = Xmonoext ] ) ; then |
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[634] | 96 | module switch nco/3.9.4 nco/3.9.4_netcdf4 |
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| 97 | fi |
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[222] | 98 | |
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| 99 | #==================================================== |
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| 100 | # Specific for ocean additionnal diagnostic |
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[451] | 101 | export FER_GO="$FER_GO /home/cont003/p86denv/IGCM_POST_UTIL/JNL /home/cont003/p86denv/GRAF /home/cont003/p86denv/GRAF/GO" |
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| 102 | export FER_PALETTE="$FER_PALETTE /home/cont003/p86denv/GRAF/PALET" |
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[222] | 103 | |
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| 104 | #==================================================== |
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| 105 | # Host specific DIRECTORIES |
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| 106 | #==================================================== |
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| 107 | |
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[544] | 108 | # ============ CESIUM START ============ # |
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| 109 | |
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[222] | 110 | #==================================================== |
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| 111 | #- Mirror libIGCM from titane to cesium if needed |
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[544] | 112 | #ROOTSYS=$( echo ${libIGCM} | gawk -F"/" '{print $3}' ) |
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| 113 | #if [ ! ${ROOTSYS} = "home" ] ; then |
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| 114 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true} |
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| 115 | #else |
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| 116 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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| 117 | #fi |
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[222] | 118 | |
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| 119 | #==================================================== |
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| 120 | #- libIGCM_POST |
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[544] | 121 | #if ( ${MirrorlibIGCM} ) ; then |
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| 122 | # PATHlibIGCM=$( echo ${libIGCM} | gawk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" ) |
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| 123 | # typeset -r libIGCM_POST=${HOME}/MIRROR/${PATHlibIGCM}/libIGCM |
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| 124 | #else |
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| 125 | # typeset -r libIGCM_POST=${libIGCM} |
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| 126 | #fi |
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[222] | 127 | |
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[544] | 128 | # ============ CESIUM END ============ # |
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| 129 | |
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[222] | 130 | #==================================================== |
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[544] | 131 | #- MirrorlibIGCM for frontend |
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| 132 | typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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| 133 | |
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| 134 | #==================================================== |
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| 135 | #- libIGCM_POST for frontend |
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| 136 | typeset -r libIGCM_POST=${libIGCM} |
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| 137 | |
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| 138 | #==================================================== |
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[587] | 139 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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| 140 | typeset -r R_EXE="${MODIPSL}/bin" |
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| 141 | |
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| 142 | #==================================================== |
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| 143 | #- SUBMIT_DIR : submission dir |
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| 144 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${LS_SUBCWD}} |
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| 145 | |
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| 146 | #==================================================== |
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[222] | 147 | #- IN |
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[545] | 148 | typeset -r R_IN=${R_IN:=/ccc/work/cont003/dsm/p86ipsl/IGCM} |
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[717] | 149 | typeset -r R_IN_ECMWF=${R_IN_ECMWF:=/ccc/work/cont003/dsm/p24data} |
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[222] | 150 | |
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| 151 | #==================================================== |
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[725] | 152 | #- ARCHIVE (dedicated to large files) |
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| 153 | typeset ARCHIVE=${CCCSTOREDIR} |
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| 154 | |
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| 155 | #==================================================== |
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| 156 | #- STORAGE (dedicated to small/medium files) |
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| 157 | typeset STORAGE=${CCCWORKDIR} |
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| 158 | |
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| 159 | #==================================================== |
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[544] | 160 | #- R_OUT |
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[725] | 161 | typeset R_OUT=${ARCHIVE}/IGCM_OUT |
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[222] | 162 | |
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| 163 | #==================================================== |
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[587] | 164 | #- R_FIG (hosting figures : monitoring and atlas, and/or small files) |
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[725] | 165 | typeset R_FIG=${STORAGE}/IGCM_OUT |
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[587] | 166 | |
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| 167 | #==================================================== |
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[544] | 168 | #- R_BUF (ONLY FOR double copy an scratch) |
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| 169 | typeset -r R_BUF=${SCRATCHDIR}/IGCM_OUT |
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[222] | 170 | |
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| 171 | #==================================================== |
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| 172 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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[648] | 173 | if ( [ ! X${LSB_QUEUE} = Xmono ] && [ ! X${LSB_QUEUE} = Xmonoext ] ) ; then |
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[544] | 174 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/RUN_DIR/${LSB_JOBID}} |
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[459] | 175 | else |
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[544] | 176 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/TMPDIR_IGCM/${LSB_JOBID}} |
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[459] | 177 | fi |
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[222] | 178 | |
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| 179 | #==================================================== |
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| 180 | #- HOST_MPIRUN_COMMAND |
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| 181 | typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="time mpirun"} |
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| 182 | |
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| 183 | #==================================================== |
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| 184 | #- Max number of arguments passed to nco operator or demigration command |
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| 185 | UNIX_MAX_LIMIT=360 |
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| 186 | |
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[616] | 187 | #==================================================== |
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| 188 | #- set PackDefault true on titane |
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| 189 | PackDefault=true |
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| 190 | |
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[664] | 191 | #==================================================== |
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| 192 | #- Number of core per node (max number of OpenMP task) |
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[616] | 193 | NUM_COREPERNODE=8 |
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[623] | 194 | |
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[616] | 195 | #==================================================== |
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| 196 | #- Default number of MPI task for IPSL coupled model |
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| 197 | #- required for backward compatibility |
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| 198 | #- |
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| 199 | DEFAULT_NUM_PROC_OCE=5 |
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| 200 | DEFAULT_NUM_PROC_CPL=1 |
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[637] | 201 | (( DEFAULT_NUM_PROC_ATM = BATCH_NUM_PROC_TOT - DEFAULT_NUM_PROC_OCE - DEFAULT_NUM_PROC_CPL )) |
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| 202 | DEFAULT_NUM_PROC_TOTAL=${BATCH_NUM_PROC_TOT} |
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[616] | 203 | |
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[725] | 204 | #D-#================================================== |
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| 205 | #D-function IGCM_sys_ChangeArchive |
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| 206 | #D-* Purpose: if SpaceName=TEST everything is stored on SCRATCHDIR |
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| 207 | #D-* Examples: |
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| 208 | #D- |
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| 209 | function IGCM_sys_ChangeArchive { |
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| 210 | IGCM_debug_PushStack "IGCM_sys_ChangeArchive" |
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[637] | 211 | |
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[743] | 212 | R_OUT=${SCRATCHDIR}/IGCM_OUT |
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| 213 | R_FIG=${SCRATCHDIR}/IGCM_OUT |
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[725] | 214 | |
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| 215 | IGCM_debug_Print 1 "R_OUT has been redefined = ${R_OUT}" |
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| 216 | IGCM_debug_Print 1 "R_FIG has been redefined = ${R_FIG}" |
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| 217 | |
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| 218 | IGCM_debug_PopStack "IGCM_sys_ChangeArchive" |
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| 219 | } |
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| 220 | |
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[222] | 221 | #D-#================================================== |
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| 222 | #D-function IGCM_sys_RshMaster |
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[531] | 223 | #D-* Purpose: Connection to frontend machine. |
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[222] | 224 | #D-* Examples: |
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| 225 | #D- |
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| 226 | function IGCM_sys_RshMaster { |
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[544] | 227 | IGCM_debug_PushStack "IGCM_sys_RshMaster" $@ |
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| 228 | /bin/ksh <<-EOF |
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[222] | 229 | export libIGCM=${libIGCM} |
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| 230 | export DEBUG_debug=${DEBUG_debug} |
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| 231 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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| 232 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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| 233 | ${@} |
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| 234 | EOF |
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[544] | 235 | if [ $? -gt 0 ] ; then |
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| 236 | echo "IGCM_sys_RshMaster : erreur." |
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| 237 | IGCM_debug_Exit "IGCM_sys_RshMaster" |
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| 238 | fi |
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| 239 | IGCM_debug_PopStack "IGCM_sys_RshMaster" |
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[222] | 240 | } |
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| 241 | |
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| 242 | #D-#================================================== |
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| 243 | #D-function IGCM_sys_RshArchive |
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| 244 | #D-* Purpose: Archive rsh command |
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| 245 | #D-* Examples: |
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| 246 | #D- |
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| 247 | function IGCM_sys_RshArchive { |
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[544] | 248 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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| 249 | /bin/ksh <<-EOF |
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[222] | 250 | ${@} |
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| 251 | EOF |
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[544] | 252 | if [ $? -gt 0 ] ; then |
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| 253 | echo "IGCM_sys_RshArchive : erreur." |
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| 254 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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| 255 | fi |
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| 256 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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[222] | 257 | } |
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| 258 | |
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| 259 | #D-#================================================== |
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| 260 | #D-function IGCM_sys_RshPost |
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| 261 | #D-* Purpose: Post-process rsh command |
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| 262 | #D-* Examples: |
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| 263 | #D- |
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| 264 | function IGCM_sys_RshPost { |
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[544] | 265 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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| 266 | if ( $DEBUG_sys ) ; then |
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| 267 | echo "IGCM_sys_RshPost :" $@ |
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| 268 | fi |
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[324] | 269 | |
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[544] | 270 | #echo cat tmp_IGCM_sys_RshPost_$$ INITIAL |
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| 271 | #cat tmp_IGCM_sys_RshPost_$$ |
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| 272 | # keep standard input (stdin) for the loop onto temporary file |
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| 273 | cat >tmp_IGCM_sys_RshPost_$$ |
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[222] | 274 | |
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[544] | 275 | # ============ FRONTEND START ============ # |
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[451] | 276 | |
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[544] | 277 | /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 278 | if [ $? -gt 0 ] ; then |
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| 279 | echo "IGCM_sys_RshPost : erreur." |
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| 280 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 281 | fi |
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| 282 | # delete temporary file |
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| 283 | \rm tmp_IGCM_sys_RshPost_$$ |
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[451] | 284 | |
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[544] | 285 | # ============ FRONTEND END ============ # |
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| 286 | |
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| 287 | # ============ CESIUM START ============ # |
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| 288 | # typeset NB_ESSAI DELAI status i |
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| 289 | # if [ "X$( grep rebuild_from tmp_IGCM_sys_RshPost_$$ )" != "X" ] ; then |
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| 290 | # #little hack so that rebuild submission is done on titane not an cesium |
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[623] | 291 | # |
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[544] | 292 | # libIGCM_POST_sed=$( echo $libIGCM_POST | sed 's/\//\\\//g' ) |
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| 293 | # POST_DIR_sed=$( echo ${POST_DIR} | sed 's/\//\\\//g' ) |
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| 294 | # sed "s/IGCM_sys_QsubPost/IGCM_sys_Qsub/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt |
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| 295 | # sed "s/ rebuild_fromWorkdir/ ${libIGCM_POST_sed}\/rebuild_fromWorkdir.job/g" tmp.txt > tmp_IGCM_sys_RshPost_$$ |
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| 296 | # sed "s/ rebuild_fromArchive/ ${libIGCM_POST_sed}\/rebuild_fromArchive.job/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt |
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| 297 | # sed "s/Script_Post_Output=/Script_Output=${POST_DIR_sed}\//g" tmp.txt > tmp_IGCM_sys_RshPost_$$ |
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| 298 | # \mv tmp.txt tmp_IGCM_sys_RshPost_$$ |
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[623] | 299 | # |
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[544] | 300 | # echo cat tmp_IGCM_sys_RshPost_$$ AFTER |
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| 301 | # cat tmp_IGCM_sys_RshPost_$$ |
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| 302 | # |
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| 303 | # /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 304 | # if [ $? -gt 0 ] ; then |
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| 305 | # echo "IGCM_sys_RshPost : erreur." |
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| 306 | # IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 307 | # fi |
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| 308 | # # delete temporary file |
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| 309 | # \rm tmp_IGCM_sys_RshPost_$$ |
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| 310 | # |
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| 311 | # else |
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| 312 | # # number of tentative |
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| 313 | # NB_ESSAI=10 |
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| 314 | # # time delay between tentative |
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| 315 | # DELAI=10 |
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| 316 | # i=0 |
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| 317 | # while [ $i -ne $NB_ESSAI ] ; do |
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| 318 | # ssh -t titane996 ssh cesium /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 319 | # status=$? |
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| 320 | # if [ ${status} -ne 0 ]; |
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| 321 | # then |
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| 322 | # sleep $DELAI |
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| 323 | # else |
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| 324 | # break |
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| 325 | # fi |
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| 326 | # let i=$i+1 |
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| 327 | # done |
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| 328 | # # delete temporary file |
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| 329 | # \rm tmp_IGCM_sys_RshPost_$$ |
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| 330 | # |
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| 331 | # if [ ${status} -gt 0 ] ; then |
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| 332 | # echo "IGCM_sys_RshPost : erreur." |
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| 333 | # IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 334 | # fi |
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| 335 | # fi |
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| 336 | |
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| 337 | # ============ CESIUM END ============ # |
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| 338 | |
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| 339 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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[222] | 340 | } |
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| 341 | |
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| 342 | #D-#================================================== |
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| 343 | #D-function IGCM_sys_SendMail |
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| 344 | #D-* Purpose: Send mail when simulation is over |
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| 345 | #D-* Examples: |
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| 346 | #D- |
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| 347 | function IGCM_sys_SendMail { |
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[544] | 348 | IGCM_debug_PushStack "IGCM_sys_SendMail" $@ |
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| 349 | if ( $DEBUG_sys ) ; then |
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| 350 | echo "IGCM_sys_SendMail :" $@ |
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| 351 | fi |
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[222] | 352 | |
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[544] | 353 | if ( ${ExitFlag} ) ; then |
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| 354 | status=failed |
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| 355 | else |
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| 356 | status=completed |
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| 357 | fi |
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[452] | 358 | |
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[719] | 359 | cat << END_MAIL > job_end.mail |
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[222] | 360 | Dear ${LOGIN}, |
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| 361 | |
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[452] | 362 | Simulation ${config_UserChoices_JobName} is ${status} on supercomputer `hostname`. |
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[222] | 363 | Job started : ${DateBegin} |
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| 364 | Job ended : ${DateEnd} |
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[434] | 365 | Output files are available in ${R_SAVE} |
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[616] | 366 | Files to be rebuild are temporarily available in ${REBUILD_DIR} |
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| 367 | Pre-packed files are temporarily available in ${R_BUFR} |
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[452] | 368 | Script files, Script Outputs and Debug files (if necessary) are available in ${SUBMIT_DIR} |
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[222] | 369 | END_MAIL |
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| 370 | |
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| 371 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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[623] | 372 | mail -s "${config_UserChoices_JobName} ${status}" ${config_UserChoices_MailName} < job_end.mail |
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[222] | 373 | elif [ -f ~/.forward ] ; then |
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[623] | 374 | mail -s "${config_UserChoices_JobName} ${status}" $( cat ~/.forward ) < job_end.mail |
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[222] | 375 | fi |
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| 376 | sleep 10 |
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| 377 | rm -f job_end.mail |
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| 378 | |
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[544] | 379 | if [ $? -gt 0 ] ; then |
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| 380 | echo "IGCM_sys_SendMail : erreur." |
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| 381 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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| 382 | fi |
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| 383 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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[222] | 384 | } |
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| 385 | |
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| 386 | #D-#================================================== |
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| 387 | #D-function IGCM_sys_Mkdir |
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| 388 | #D-* Purpose: Master locale mkdir command |
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| 389 | #D-* Examples: |
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| 390 | #D- |
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| 391 | function IGCM_sys_Mkdir { |
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[544] | 392 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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| 393 | if ( $DEBUG_sys ) ; then |
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| 394 | echo "IGCM_sys_Mkdir :" $@ |
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| 395 | fi |
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| 396 | if [ ! -d ${1} ]; then |
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| 397 | \mkdir -p $1 |
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| 398 | if [ $? -gt 0 ] ; then |
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| 399 | echo "IGCM_sys_Mkdir : erreur." |
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| 400 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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[222] | 401 | fi |
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[544] | 402 | fi |
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| 403 | # vérification : |
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| 404 | if [ ! -d ${1} ] ; then |
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| 405 | echo "IGCM_sys_Mkdir : erreur." |
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| 406 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 407 | fi |
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| 408 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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[222] | 409 | } |
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| 410 | |
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| 411 | #D-#================================================== |
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| 412 | #D-function IGCM_sys_MkdirArchive |
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| 413 | #D-* Purpose: Mkdir on Archive |
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| 414 | #D-* Examples: |
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| 415 | #D- |
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| 416 | function IGCM_sys_MkdirArchive { |
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[544] | 417 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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| 418 | if ( $DEBUG_sys ) ; then |
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| 419 | echo "IGCM_sys_MkdirArchive :" $@ |
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| 420 | fi |
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| 421 | #- creation de repertoire sur le serveur fichier |
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[623] | 422 | if [ ! -d ${1} ]; then |
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[544] | 423 | \mkdir -p $1 |
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| 424 | if [ $? -gt 0 ] ; then |
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| 425 | echo "IGCM_sys_MkdirArchive : erreur." |
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| 426 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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[222] | 427 | fi |
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[544] | 428 | fi |
---|
| 429 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
---|
[222] | 430 | } |
---|
| 431 | |
---|
| 432 | #D-#================================================== |
---|
| 433 | #D-function IGCM_sys_MkdirWork |
---|
| 434 | #D-* Purpose: Mkdir on Work |
---|
| 435 | #D-* Examples: |
---|
| 436 | #D- |
---|
| 437 | function IGCM_sys_MkdirWork { |
---|
[544] | 438 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
---|
| 439 | if ( $DEBUG_sys ) ; then |
---|
| 440 | echo "IGCM_sys_MkdirWork :" $@ |
---|
| 441 | fi |
---|
| 442 | #- creation de repertoire sur le serveur fichier |
---|
[623] | 443 | if [ ! -d ${1} ]; then |
---|
[544] | 444 | \mkdir -p $1 |
---|
| 445 | if [ $? -gt 0 ] ; then |
---|
| 446 | echo "IGCM_sys_MkdirWork : erreur." |
---|
| 447 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
---|
[222] | 448 | fi |
---|
[544] | 449 | fi |
---|
| 450 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
---|
[222] | 451 | } |
---|
| 452 | |
---|
| 453 | #D-#================================================== |
---|
| 454 | #D-function IGCM_sys_Cd |
---|
| 455 | #D-* Purpose: master cd command |
---|
| 456 | #D-* Examples: |
---|
| 457 | #D- |
---|
| 458 | function IGCM_sys_Cd { |
---|
[544] | 459 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
---|
| 460 | if ( $DEBUG_sys ) ; then |
---|
| 461 | echo "IGCM_sys_Cd :" $@ |
---|
| 462 | fi |
---|
| 463 | \cd $1 |
---|
| 464 | if [ $? -gt 0 ] ; then |
---|
| 465 | echo "IGCM_sys_Cd : erreur." |
---|
| 466 | IGCM_debug_Exit "IGCM_sys_Cd" |
---|
| 467 | fi |
---|
| 468 | IGCM_debug_PopStack "IGCM_sys_Cd" |
---|
[222] | 469 | } |
---|
| 470 | |
---|
| 471 | #D-#================================================== |
---|
| 472 | #D-function IGCM_sys_Chmod |
---|
| 473 | #D-* Purpose: Chmod |
---|
| 474 | #D-* Examples: |
---|
| 475 | #D- |
---|
| 476 | function IGCM_sys_Chmod { |
---|
[544] | 477 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
---|
| 478 | if ( $DEBUG_sys ) ; then |
---|
| 479 | echo "IGCM_sys_Chmod :" $@ |
---|
| 480 | fi |
---|
| 481 | if [ $DRYRUN -le 1 ]; then |
---|
| 482 | \chmod $@ |
---|
| 483 | if [ $? -gt 0 ] ; then |
---|
| 484 | echo "IGCM_sys_Chmod : erreur." |
---|
| 485 | IGCM_debug_Exit "IGCM_sys_Chmod" |
---|
[222] | 486 | fi |
---|
[544] | 487 | fi |
---|
| 488 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
---|
[222] | 489 | } |
---|
| 490 | |
---|
| 491 | #D-#================================================== |
---|
| 492 | #D-function IGCM_sys_FileSize |
---|
| 493 | #D-* Purpose: Filesize |
---|
| 494 | #D-* Examples: |
---|
| 495 | #D- |
---|
| 496 | function IGCM_sys_FileSize { |
---|
[544] | 497 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
---|
[222] | 498 | |
---|
[544] | 499 | typeset sizeF |
---|
| 500 | set +A sizeF -- $( ls -la ${1} ) |
---|
| 501 | if [ $? -gt 0 ] ; then |
---|
| 502 | IGCM_debug_Exit "IGCM_sys_FileSize" |
---|
| 503 | fi |
---|
| 504 | eval ${2}=${sizeF[4]} |
---|
[222] | 505 | |
---|
[544] | 506 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
---|
[222] | 507 | } |
---|
| 508 | |
---|
| 509 | #D-#================================================== |
---|
| 510 | #D-function IGCM_sys_TestDir |
---|
| 511 | #D-* Purpose: Test Directory that must exists |
---|
| 512 | #D-* Examples: |
---|
| 513 | #D- |
---|
| 514 | function IGCM_sys_TestDir { |
---|
[544] | 515 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
---|
| 516 | if ( $DEBUG_sys ) ; then |
---|
| 517 | echo "IGCM_sys_TestDir :" $@ |
---|
| 518 | fi |
---|
| 519 | typeset ExistFlag |
---|
| 520 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
| 521 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
---|
[222] | 522 | |
---|
[544] | 523 | return ${ExistFlag} |
---|
[222] | 524 | } |
---|
| 525 | |
---|
| 526 | #D-#================================================== |
---|
| 527 | #D-function IGCM_sys_TestDirArchive |
---|
| 528 | #D-* Purpose: Test Directory that must exists on Archive |
---|
| 529 | #D-* Examples: |
---|
| 530 | #D- |
---|
| 531 | function IGCM_sys_TestDirArchive { |
---|
[544] | 532 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
---|
| 533 | if ( $DEBUG_sys ) ; then |
---|
| 534 | echo "IGCM_sys_TestDirArchive :" $@ |
---|
| 535 | fi |
---|
| 536 | typeset ExistFlag |
---|
| 537 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
| 538 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
---|
[222] | 539 | |
---|
[544] | 540 | return ${ExistFlag} |
---|
[222] | 541 | } |
---|
| 542 | |
---|
| 543 | #D-#================================================== |
---|
[548] | 544 | #D-function IGCM_sys_IsFileArchived |
---|
| 545 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
| 546 | #D-* Examples: |
---|
| 547 | #D- |
---|
| 548 | function IGCM_sys_IsFileArchived { |
---|
| 549 | IGCM_debug_PushStack "IGCM_sys_IsFileArchived" $@ |
---|
| 550 | if ( $DEBUG_sys ) ; then |
---|
| 551 | echo "IGCM_sys_IsFileArchived :" $@ |
---|
| 552 | fi |
---|
| 553 | typeset IsArchivedFlag |
---|
[618] | 554 | IsArchivedFlag=$( [ X$( echo $1 | grep ^\/ccc\/store ) != X ] && echo 0 || echo 1 ) |
---|
[548] | 555 | IGCM_debug_PopStack "IGCM_sys_IsFileArchived" |
---|
| 556 | |
---|
| 557 | return ${IsArchivedFlag} |
---|
| 558 | } |
---|
| 559 | |
---|
| 560 | #D-#================================================== |
---|
[222] | 561 | #D-function IGCM_sys_TestFileArchive |
---|
| 562 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
| 563 | #D-* Examples: |
---|
| 564 | #D- |
---|
| 565 | function IGCM_sys_TestFileArchive { |
---|
[544] | 566 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
---|
| 567 | typeset ExistFlag |
---|
| 568 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
| 569 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
---|
[222] | 570 | |
---|
[544] | 571 | return ${ExistFlag} |
---|
[222] | 572 | } |
---|
| 573 | |
---|
| 574 | #D-#================================================== |
---|
[544] | 575 | #D-function IGCM_sys_TestFileBuffer |
---|
| 576 | #D-* Purpose: Test file that must NOT EXISTS on Buffer |
---|
| 577 | #D-* Examples: |
---|
| 578 | #D- |
---|
| 579 | function IGCM_sys_TestFileBuffer { |
---|
| 580 | IGCM_debug_PushStack "IGCM_sys_TestFileBuffer" $@ |
---|
| 581 | typeset ExistFlag |
---|
| 582 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
| 583 | IGCM_debug_PopStack "IGCM_sys_TestFileBuffer" |
---|
| 584 | |
---|
| 585 | return ${ExistFlag} |
---|
| 586 | } |
---|
| 587 | |
---|
| 588 | #D-#================================================== |
---|
[222] | 589 | #D-function IGCM_sys_CountFileArchive |
---|
| 590 | #D-* Purpose: Count files on Archive filesystem |
---|
| 591 | #D-* Examples: |
---|
| 592 | #D- |
---|
| 593 | function IGCM_sys_CountFileArchive { |
---|
[544] | 594 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
---|
| 595 | ls ${@} 2>/dev/null | wc -l |
---|
| 596 | if [ $? -gt 0 ] ; then |
---|
| 597 | echo "IGCM_sys_CountFileArchive : erreur." |
---|
| 598 | fi |
---|
| 599 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
---|
[222] | 600 | } |
---|
| 601 | |
---|
| 602 | #D-#================================================== |
---|
[544] | 603 | #D-function IGCM_sys_CountFileBuffer |
---|
| 604 | #D-* Purpose: Count files on Scratch filesystem |
---|
| 605 | #D-* Examples: |
---|
| 606 | #D- |
---|
| 607 | function IGCM_sys_CountFileBuffer { |
---|
| 608 | IGCM_debug_PushStack "IGCM_sys_CountFileBuffer" $@ |
---|
| 609 | ls ${@} 2>/dev/null | wc -l |
---|
| 610 | if [ $? -gt 0 ] ; then |
---|
| 611 | echo "IGCM_sys_CountFileBuffer : erreur." |
---|
| 612 | fi |
---|
| 613 | IGCM_debug_PopStack "IGCM_sys_CountFileBuffer" |
---|
| 614 | } |
---|
| 615 | |
---|
| 616 | #D-#================================================== |
---|
[222] | 617 | #D-function IGCM_sys_Tree |
---|
| 618 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
---|
| 619 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
---|
| 620 | #D- |
---|
| 621 | function IGCM_sys_Tree { |
---|
[544] | 622 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
---|
| 623 | if ( $DEBUG_sys ) ; then |
---|
| 624 | echo "IGCM_sys_Tree :" $@ |
---|
| 625 | fi |
---|
[222] | 626 | |
---|
[544] | 627 | \ls -lR ${@} |
---|
[222] | 628 | |
---|
[544] | 629 | IGCM_debug_PopStack "IGCM_sys_Tree" |
---|
[222] | 630 | } |
---|
| 631 | |
---|
| 632 | #D-#================================================== |
---|
| 633 | #D-function IGCM_sys_Tar |
---|
[544] | 634 | #D-* Purpose: master tar command |
---|
[222] | 635 | #D-* Examples: |
---|
| 636 | #D- |
---|
| 637 | function IGCM_sys_Tar { |
---|
[544] | 638 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
---|
| 639 | if ( $DEBUG_sys ) ; then |
---|
| 640 | echo "IGCM_sys_Tar :" $@ |
---|
| 641 | fi |
---|
| 642 | \tar cf $@ |
---|
| 643 | if [ $? -gt 0 ] ; then |
---|
| 644 | echo "IGCM_sys_Tar : erreur." |
---|
| 645 | IGCM_debug_Exit "IGCM_sys_Tar" |
---|
| 646 | fi |
---|
| 647 | IGCM_debug_PopStack "IGCM_sys_Tar" |
---|
[222] | 648 | } |
---|
| 649 | |
---|
| 650 | #D-#================================================== |
---|
| 651 | #D-function IGCM_sys_UnTar |
---|
| 652 | #D-* Purpose: master un-tar command |
---|
| 653 | #D-* Examples: |
---|
| 654 | #D- |
---|
| 655 | function IGCM_sys_UnTar { |
---|
[544] | 656 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
---|
| 657 | if ( $DEBUG_sys ) ; then |
---|
| 658 | echo "IGCM_sys_UnTar :" $@ |
---|
| 659 | fi |
---|
| 660 | \tar xvf $1 |
---|
| 661 | if [ $? -gt 0 ] ; then |
---|
| 662 | echo "IGCM_sys_UnTar : erreur." |
---|
| 663 | IGCM_debug_Exit "IGCM_sys_UnTar" |
---|
| 664 | fi |
---|
| 665 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
---|
[222] | 666 | } |
---|
| 667 | |
---|
| 668 | #D-#================================================== |
---|
| 669 | #D-function IGCM_sys_Qsub |
---|
| 670 | #D-* Purpose: Qsub new job |
---|
| 671 | #D-* Examples: |
---|
| 672 | #D- |
---|
| 673 | function IGCM_sys_Qsub { |
---|
[544] | 674 | IGCM_debug_PushStack "IGCM_sys_Qsub" $@ |
---|
| 675 | if ( $DEBUG_sys ) ; then |
---|
| 676 | echo "IGCM_sys_Qsub :" $@ |
---|
| 677 | fi |
---|
| 678 | typeset options |
---|
| 679 | if [ ${config_UserChoices_JobName}.${CumulPeriod} = "." ] ; then |
---|
[853] | 680 | options=" -o ${SUBMIT_DIR}/${Script_Output} -e ${SUBMIT_DIR}/${Script_Output}" |
---|
[544] | 681 | else |
---|
[853] | 682 | options=" -o ${SUBMIT_DIR}/${Script_Output} -e ${SUBMIT_DIR}/${Script_Output} -r ${config_UserChoices_JobName}.${CumulPeriod}" |
---|
[544] | 683 | fi |
---|
[467] | 684 | |
---|
[544] | 685 | /usr/local/bin/ccc_msub ${options} < $1 |
---|
| 686 | if [ $? -gt 0 ] ; then |
---|
| 687 | echo "IGCM_sys_Qsub : erreur ${options} $1" |
---|
| 688 | IGCM_debug_Exit "IGCM_sys_Qsub" |
---|
| 689 | fi |
---|
| 690 | IGCM_debug_PopStack "IGCM_sys_Qsub" |
---|
[222] | 691 | } |
---|
| 692 | |
---|
| 693 | #D-#================================================== |
---|
| 694 | #D-function IGCM_sys_QsubPost |
---|
| 695 | #D-* Purpose: Qsub new job on scalaire |
---|
| 696 | #D-* Examples: |
---|
| 697 | #D- |
---|
| 698 | function IGCM_sys_QsubPost { |
---|
[544] | 699 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
| 700 | if ( $DEBUG_sys ) ; then |
---|
| 701 | echo "IGCM_sys_QsubPost :" $@ |
---|
| 702 | fi |
---|
| 703 | |
---|
| 704 | # Need to export listVarEnv for cesium |
---|
| 705 | # NO Need to export listVarEnv for titane |
---|
| 706 | # ============ FRONTEND START ============ # |
---|
| 707 | |
---|
| 708 | /usr/local/bin/ccc_msub -p ${BRIDGE_MSUB_PROJECT} -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.out ${libIGCM_POST}/$1.job |
---|
| 709 | |
---|
| 710 | # ============ FRONTEND END ============ # |
---|
| 711 | |
---|
| 712 | # ============ CESIUM START ============ # |
---|
| 713 | # typeset NB_ESSAI DELAI status i |
---|
| 714 | # # number of tentative |
---|
| 715 | # NB_ESSAI=10 |
---|
| 716 | # # time delay between tentative |
---|
| 717 | # DELAI=10 |
---|
| 718 | # (( i = 0 )) |
---|
| 719 | # while [ $i -lt $NB_ESSAI ] ; do |
---|
| 720 | # /usr/local/bin/ccc_msub -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.e.out -E "-v ${listVarEnv}" ${libIGCM_POST}/$1.job |
---|
| 721 | # status=$? |
---|
| 722 | # if [ ${status} -gt 0 ]; then |
---|
| 723 | # sleep $DELAI |
---|
| 724 | # else |
---|
| 725 | # break |
---|
| 726 | # fi |
---|
| 727 | # (( i = i + 1 )) |
---|
[623] | 728 | # done |
---|
[544] | 729 | # ============ CESIUM END ============ # |
---|
| 730 | |
---|
| 731 | if [ $? -gt 0 ] ; then |
---|
| 732 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
| 733 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
| 734 | fi |
---|
| 735 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
[222] | 736 | } |
---|
| 737 | |
---|
| 738 | #D-************************* |
---|
[623] | 739 | #D- File transfer functions |
---|
[222] | 740 | #D-************************* |
---|
| 741 | #D- |
---|
| 742 | |
---|
| 743 | #D-#================================================== |
---|
| 744 | #D-function IGCM_sys_Rsync_out |
---|
| 745 | #D-* Purpose: treat return val of rsync |
---|
| 746 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
| 747 | #D- Error values and explanations can depend on your system version. |
---|
| 748 | function IGCM_sys_Rsync_out { |
---|
[719] | 749 | status=$1 |
---|
| 750 | if [ ! $status ] ; then |
---|
[544] | 751 | echo "rsync error !" |
---|
| 752 | fi |
---|
[222] | 753 | |
---|
[544] | 754 | if [ $MYLANG = "fr" ]; then |
---|
[719] | 755 | case $status in |
---|
[544] | 756 | 0) return ;; |
---|
| 757 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
| 758 | echo "Erreur de syntaxe ou d'utilisation." |
---|
| 759 | return;; |
---|
| 760 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
| 761 | echo "Incompatibilité de protocole." |
---|
| 762 | return;; |
---|
| 763 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
| 764 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
| 765 | echo "répertoires" |
---|
| 766 | return;; |
---|
| 767 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
| 768 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
| 769 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
| 770 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
| 771 | echo "pas par le serveur a été spécifiée." |
---|
| 772 | return;; |
---|
| 773 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
| 774 | echo "Erreur dans le socket d'entrée sortie" |
---|
| 775 | return;; |
---|
| 776 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
| 777 | echo "Erreur d'entrée sortie fichier" |
---|
| 778 | return;; |
---|
| 779 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
| 780 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
| 781 | return;; |
---|
| 782 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
| 783 | echo "Erreur avec les diagnostics du programme" |
---|
| 784 | return;; |
---|
| 785 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
| 786 | echo "Erreur dans le code IPC" |
---|
| 787 | return;; |
---|
| 788 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
| 789 | echo "SIGUSR1 ou SIGINT reçu" |
---|
| 790 | return;; |
---|
| 791 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
| 792 | echo "Une erreur retournée par waitpid()" |
---|
| 793 | return;; |
---|
| 794 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
| 795 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
| 796 | return;; |
---|
| 797 | 23) echo "" |
---|
| 798 | echo "Erreur fichier inexistant" |
---|
| 799 | return;; |
---|
| 800 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
| 801 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
| 802 | return;; |
---|
[719] | 803 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $status |
---|
[544] | 804 | return;; |
---|
| 805 | esac |
---|
| 806 | elif [ $MYLANG = "en" ] ; then |
---|
[719] | 807 | case $status in |
---|
[623] | 808 | 0) return;; |
---|
[544] | 809 | 1) echo "rsync error : Syntax or usage error " |
---|
| 810 | return;; |
---|
| 811 | 2) echo "rsync error : Protocol incompatibility " |
---|
| 812 | return;; |
---|
| 813 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
| 814 | return;; |
---|
| 815 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
| 816 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
| 817 | echo "them; or an option was specified that is supported by the client and" |
---|
| 818 | echo "not by the server." |
---|
| 819 | return;; |
---|
| 820 | 5) echo "rsync error : Error starting client-server protocol" |
---|
| 821 | return;; |
---|
| 822 | 10) echo "rsync error : Error in socket I/O " |
---|
| 823 | return;; |
---|
| 824 | 11) echo "rsync error : Error in file I/O " |
---|
| 825 | return;; |
---|
| 826 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
| 827 | return;; |
---|
| 828 | 13) echo "rsync error : Errors with program diagnostics " |
---|
| 829 | return;; |
---|
| 830 | 14) echo "rsync error : Error in IPC code " |
---|
| 831 | return;; |
---|
| 832 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
| 833 | return;; |
---|
| 834 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
| 835 | return;; |
---|
| 836 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
| 837 | return;; |
---|
| 838 | 23) echo "rsync error : Partial transfer due to error" |
---|
| 839 | return;; |
---|
| 840 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
| 841 | return;; |
---|
| 842 | 30) echo "rsync error : Timeout in data send/receive " |
---|
| 843 | return;; |
---|
[719] | 844 | *) echo "rsync error : return code of rsync unknown :" $status |
---|
[544] | 845 | return;; |
---|
| 846 | esac |
---|
| 847 | else |
---|
| 848 | echo "unknown language $MYLANG." |
---|
| 849 | return |
---|
| 850 | fi |
---|
[222] | 851 | } |
---|
| 852 | |
---|
| 853 | #D-#================================================== |
---|
| 854 | #D-function IGCM_sys_Miror_libIGCM |
---|
| 855 | #D-* Purpose: Mirror libIGCM PATH and lib to cesium |
---|
| 856 | #D-* Examples: |
---|
| 857 | #D- |
---|
| 858 | function IGCM_sys_Mirror_libIGCM { |
---|
[544] | 859 | IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM" |
---|
| 860 | if ( $DEBUG_sys ) ; then |
---|
| 861 | echo "IGCM_sys_Mirror_libIGCM" |
---|
| 862 | fi |
---|
[222] | 863 | |
---|
[717] | 864 | typeset status DEST |
---|
[222] | 865 | |
---|
[544] | 866 | mkdir -p ${HOME}/MIRROR/${PATHlibIGCM} |
---|
[222] | 867 | |
---|
[544] | 868 | echo ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} > out_rsync 2>&1 |
---|
| 869 | ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} >> out_rsync 2>&1 |
---|
[717] | 870 | status=$? |
---|
[222] | 871 | |
---|
[717] | 872 | if [ ${status} -gt 0 ] ; then |
---|
[544] | 873 | echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on cesium." |
---|
| 874 | cat out_rsync |
---|
| 875 | fi |
---|
| 876 | IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM" |
---|
[222] | 877 | } |
---|
| 878 | |
---|
| 879 | #D-#================================================== |
---|
| 880 | #D-function IGCM_sys_Cp |
---|
| 881 | #D-* Purpose: generic cp |
---|
| 882 | #D-* Examples: |
---|
| 883 | #D- |
---|
| 884 | function IGCM_sys_Cp { |
---|
[544] | 885 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
| 886 | if ( $DEBUG_sys ) ; then |
---|
| 887 | echo "IGCM_sys_Cp :" $@ |
---|
| 888 | fi |
---|
[222] | 889 | |
---|
[717] | 890 | typeset status |
---|
[222] | 891 | |
---|
[544] | 892 | echo cp $@ > out_rsync 2>&1 |
---|
| 893 | \cp $@ >> out_rsync 2>&1 |
---|
[717] | 894 | status=$? |
---|
[222] | 895 | |
---|
[717] | 896 | if [ ${status} -gt 0 ] ; then |
---|
| 897 | echo "IGCM_sys_Cp : error code ${status}" |
---|
[544] | 898 | cat out_rsync |
---|
| 899 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
| 900 | else |
---|
| 901 | \rm out_rsync |
---|
| 902 | fi |
---|
| 903 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
[222] | 904 | } |
---|
| 905 | |
---|
| 906 | #D-#================================================== |
---|
| 907 | #D-function IGCM_sys_Rm |
---|
| 908 | #D-* Purpose: generic rm |
---|
| 909 | #D-* Examples: |
---|
| 910 | #D- |
---|
| 911 | function IGCM_sys_Rm { |
---|
[544] | 912 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
| 913 | if ( $DEBUG_sys ) ; then |
---|
| 914 | echo "IGCM_sys_Rm :" $@ |
---|
| 915 | fi |
---|
[222] | 916 | |
---|
[717] | 917 | typeset status |
---|
[222] | 918 | |
---|
[544] | 919 | echo rm $@ > out_rsync 2>&1 |
---|
| 920 | \rm $@ >> out_rsync 2>&1 |
---|
[717] | 921 | status=$? |
---|
[222] | 922 | |
---|
[717] | 923 | if [ ${status} -gt 0 ] ; then |
---|
| 924 | echo "IGCM_sys_Rm : error code ${status}" |
---|
[544] | 925 | cat out_rsync |
---|
| 926 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
| 927 | else |
---|
| 928 | \rm out_rsync |
---|
| 929 | fi |
---|
| 930 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
[222] | 931 | } |
---|
| 932 | |
---|
| 933 | #D-#================================================== |
---|
[467] | 934 | #D-function IGCM_sys_RmRunDir |
---|
| 935 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
| 936 | #D- scheduler will do the job) |
---|
| 937 | #D-* Examples: |
---|
| 938 | #D- |
---|
| 939 | function IGCM_sys_RmRunDir { |
---|
[544] | 940 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
| 941 | if ( $DEBUG_sys ) ; then |
---|
| 942 | echo "IGCM_sys_RmRunDir :" $@ |
---|
| 943 | fi |
---|
[467] | 944 | |
---|
[717] | 945 | typeset status |
---|
[467] | 946 | |
---|
[544] | 947 | echo rm $@ > out_rsync 2>&1 |
---|
| 948 | \rm $@ >> out_rsync 2>&1 |
---|
[717] | 949 | status=$? |
---|
[467] | 950 | |
---|
[717] | 951 | if [ ${status} -gt 0 ] ; then |
---|
| 952 | echo "IGCM_sys_RmRunDir : error code ${status}" |
---|
[544] | 953 | cat out_rsync |
---|
| 954 | IGCM_debug_Exit "IGCM_sys_RmRunDir" |
---|
| 955 | else |
---|
| 956 | \rm out_rsync |
---|
| 957 | fi |
---|
| 958 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
[467] | 959 | } |
---|
| 960 | |
---|
| 961 | #D-#================================================== |
---|
[222] | 962 | #D-function IGCM_sys_Mv |
---|
| 963 | #D-* Purpose: generic move |
---|
| 964 | #D-* Examples: |
---|
| 965 | #D- |
---|
| 966 | function IGCM_sys_Mv { |
---|
[544] | 967 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
| 968 | if ( $DEBUG_sys ) ; then |
---|
| 969 | echo "IGCM_sys_Mv :" $@ |
---|
| 970 | fi |
---|
[222] | 971 | |
---|
[544] | 972 | if [ $DRYRUN = 0 ]; then |
---|
[222] | 973 | |
---|
[717] | 974 | typeset status |
---|
[623] | 975 | |
---|
[544] | 976 | echo mv $@ > out_rsync 2>&1 |
---|
| 977 | \mv $@ >> out_rsync 2>&1 |
---|
[717] | 978 | status=$? |
---|
[623] | 979 | |
---|
[717] | 980 | if [ ${status} -gt 0 ] ; then |
---|
| 981 | echo "IGCM_sys_Mv : error code ${status}" |
---|
[544] | 982 | cat out_rsync |
---|
| 983 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
[222] | 984 | else |
---|
[544] | 985 | \rm out_rsync |
---|
[222] | 986 | fi |
---|
[544] | 987 | fi |
---|
| 988 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
[222] | 989 | } |
---|
| 990 | |
---|
| 991 | #D-#================================================== |
---|
| 992 | #D-function IGCM_sys_Put_Dir |
---|
| 993 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
| 994 | #D-* Examples: |
---|
| 995 | #D- |
---|
| 996 | function IGCM_sys_Put_Dir { |
---|
[544] | 997 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
| 998 | if ( $DEBUG_sys ) ; then |
---|
| 999 | echo "IGCM_sys_Put_Dir :" $@ |
---|
| 1000 | fi |
---|
| 1001 | if [ $DRYRUN = 0 ]; then |
---|
| 1002 | if [ ! -d ${1} ] ; then |
---|
| 1003 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
| 1004 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 1005 | return |
---|
[222] | 1006 | fi |
---|
| 1007 | |
---|
[717] | 1008 | typeset status |
---|
[222] | 1009 | |
---|
[544] | 1010 | # Only if we use rsync |
---|
| 1011 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 1012 | # |
---|
| 1013 | #USUAL WAY |
---|
| 1014 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
[717] | 1015 | status=$? |
---|
[222] | 1016 | |
---|
[717] | 1017 | if [ ${status} -gt 0 ] ; then |
---|
| 1018 | echo "IGCM_sys_Put_Dir : error code ${status}" |
---|
[544] | 1019 | cat out_rsync |
---|
| 1020 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
[222] | 1021 | else |
---|
[544] | 1022 | \rm out_rsync |
---|
[222] | 1023 | fi |
---|
[544] | 1024 | fi |
---|
| 1025 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
[222] | 1026 | } |
---|
| 1027 | |
---|
| 1028 | #D-#================================================== |
---|
| 1029 | #D-function IGCM_sys_Get_Dir |
---|
[544] | 1030 | #D-* Purpose: Copy a complete directory from ${ARCHIVE} |
---|
[222] | 1031 | #D-* Examples: |
---|
| 1032 | #D- |
---|
| 1033 | function IGCM_sys_Get_Dir { |
---|
[544] | 1034 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
| 1035 | if ( $DEBUG_sys ) ; then |
---|
| 1036 | echo "IGCM_sys_Get_Dir :" $@ |
---|
| 1037 | fi |
---|
| 1038 | if [ $DRYRUN = 0 ]; then |
---|
| 1039 | # if [ ! -d ${1} ] ; then |
---|
| 1040 | # echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
| 1041 | # IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 1042 | # return |
---|
| 1043 | # fi |
---|
[222] | 1044 | |
---|
[717] | 1045 | typeset NB_ESSAI DELAI status i |
---|
| 1046 | # number of tentative |
---|
| 1047 | NB_ESSAI=3 |
---|
| 1048 | # time delay between tentative |
---|
| 1049 | DELAI=2 |
---|
[222] | 1050 | |
---|
[544] | 1051 | # Only if we use rsync |
---|
| 1052 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 1053 | # |
---|
| 1054 | # USUAL WAY |
---|
| 1055 | # add dmfind/dmget (to demigrate all offline files) : |
---|
[587] | 1056 | #dmfind $1 -state MIG -o -state OFL -o -state PAR | dmget |
---|
[713] | 1057 | ccc_hsm get -r $1 |
---|
[222] | 1058 | |
---|
[717] | 1059 | i=0 |
---|
| 1060 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1061 | \cp -ur $1 $2 >> out_rsync 2>&1 |
---|
| 1062 | status=$? |
---|
| 1063 | if [ ${status} -gt 0 ]; then |
---|
| 1064 | IGCM_debug_Print 2 "IGCM_sys_Get_Dir : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1065 | IGCM_debug_Print 2 "IGCM_sys_Get_Dir : sleep ${DELAI} seconds and try again." |
---|
| 1066 | sleep $DELAI |
---|
| 1067 | else |
---|
| 1068 | break |
---|
| 1069 | fi |
---|
| 1070 | (( i = i + 1 )) |
---|
| 1071 | done |
---|
| 1072 | |
---|
| 1073 | if [ ${status} -gt 0 ] ; then |
---|
[544] | 1074 | echo "IGCM_sys_Get_Dir : error." |
---|
| 1075 | cat out_rsync |
---|
| 1076 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
[222] | 1077 | else |
---|
[544] | 1078 | \rm out_rsync |
---|
[222] | 1079 | fi |
---|
[544] | 1080 | fi |
---|
| 1081 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
[222] | 1082 | } |
---|
| 1083 | |
---|
| 1084 | #D-#================================================== |
---|
| 1085 | #D-function IGCM_sys_Get_Master |
---|
| 1086 | #D-* Purpose: Copy a complete directory from MASTER filesystem |
---|
| 1087 | #D-* Examples: |
---|
| 1088 | #D- |
---|
| 1089 | function IGCM_sys_Get_Master { |
---|
[544] | 1090 | IGCM_debug_PushStack "IGCM_sys_Get_Master" $@ |
---|
| 1091 | if ( $DEBUG_sys ) ; then |
---|
| 1092 | echo "IGCM_sys_Get_Master :" $@ |
---|
| 1093 | fi |
---|
| 1094 | if [ $DRYRUN = 0 ]; then |
---|
[640] | 1095 | if ( [ ! -d ${1} ] && [ ! -f ${1} ] ) ; then |
---|
[544] | 1096 | echo "WARNING : IGCM_sys_Get_Master ${1} DOES NOT EXIST ." |
---|
| 1097 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
| 1098 | return |
---|
[222] | 1099 | fi |
---|
| 1100 | |
---|
[717] | 1101 | typeset NB_ESSAI DELAI status i |
---|
| 1102 | # number of tentative |
---|
| 1103 | NB_ESSAI=3 |
---|
| 1104 | # time delay between tentative |
---|
| 1105 | DELAI=2 |
---|
[222] | 1106 | |
---|
[717] | 1107 | i=0 |
---|
| 1108 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1109 | \cp -urL $1 $2 > out_rsync 2>&1 |
---|
| 1110 | status=$? |
---|
| 1111 | if [ ${status} -gt 0 ]; then |
---|
| 1112 | IGCM_debug_Print 2 "IGCM_sys_Get_Master : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1113 | IGCM_debug_Print 2 "IGCM_sys_Get_Master : sleep ${DELAI} seconds and try again." |
---|
| 1114 | sleep $DELAI |
---|
| 1115 | else |
---|
| 1116 | break |
---|
| 1117 | fi |
---|
| 1118 | (( i = i + 1 )) |
---|
| 1119 | done |
---|
[222] | 1120 | |
---|
[717] | 1121 | if [ ${status} -gt 0 ] ; then |
---|
[544] | 1122 | echo "IGCM_sys_Get_Master : error." |
---|
| 1123 | cat out_rsync |
---|
| 1124 | IGCM_debug_Exit "IGCM_sys_Get_Master" |
---|
[222] | 1125 | else |
---|
[544] | 1126 | \rm out_rsync |
---|
[222] | 1127 | fi |
---|
[544] | 1128 | fi |
---|
| 1129 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
[222] | 1130 | } |
---|
| 1131 | |
---|
[689] | 1132 | #==================================================== |
---|
| 1133 | #- Call IGCM_sys_Mirror_libIGCM now ! |
---|
| 1134 | if ( $MirrorlibIGCM ) ; then |
---|
| 1135 | IGCM_sys_Mirror_libIGCM |
---|
| 1136 | fi |
---|
| 1137 | |
---|
[222] | 1138 | #D-#================================================== |
---|
| 1139 | #D-function IGCM_sys_Put_Rest |
---|
[544] | 1140 | #D-* Purpose: Put computied restarts on ${ARCHIVE}. |
---|
[222] | 1141 | #D- File and target directory must exist. |
---|
| 1142 | #D-* Examples: |
---|
| 1143 | #D- |
---|
| 1144 | function IGCM_sys_Put_Rest { |
---|
[544] | 1145 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
| 1146 | if ( $DEBUG_sys ) ; then |
---|
| 1147 | echo "IGCM_sys_Put_Rest :" $@ |
---|
| 1148 | fi |
---|
| 1149 | if [ $DRYRUN = 0 ]; then |
---|
| 1150 | if [ ! -f ${1} ] ; then |
---|
| 1151 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
| 1152 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[222] | 1153 | fi |
---|
| 1154 | |
---|
[717] | 1155 | typeset status |
---|
[544] | 1156 | # |
---|
| 1157 | if [ X${JobType} = XRUN ] ; then |
---|
| 1158 | IGCM_sys_Chmod 444 ${1} |
---|
| 1159 | fi |
---|
[222] | 1160 | |
---|
[544] | 1161 | # |
---|
| 1162 | # USUAL WAY |
---|
| 1163 | \cp $1 $2 > out_rsync 2>&1 |
---|
[717] | 1164 | status=$? |
---|
[544] | 1165 | |
---|
[623] | 1166 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1167 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1168 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[222] | 1169 | |
---|
[623] | 1170 | # #RSYNC WITH NFS USE |
---|
| 1171 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1172 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[222] | 1173 | |
---|
[717] | 1174 | # status=$? |
---|
| 1175 | # IGCM_sys_Rsync_out $status |
---|
[222] | 1176 | |
---|
[623] | 1177 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
[717] | 1178 | # (( status=status+$? )) |
---|
[222] | 1179 | |
---|
[717] | 1180 | if [ ${status} -gt 0 ] ; then |
---|
| 1181 | echo "IGCM_sys_Put_Rest : cp failed error code ${status}" |
---|
[544] | 1182 | cat out_rsync |
---|
| 1183 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[222] | 1184 | else |
---|
[544] | 1185 | \rm out_rsync |
---|
[222] | 1186 | fi |
---|
[544] | 1187 | fi |
---|
| 1188 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
[222] | 1189 | } |
---|
| 1190 | |
---|
| 1191 | #D-#================================================== |
---|
[544] | 1192 | #D-function IGCM_sys_PutBuffer_Rest |
---|
| 1193 | #D-* Purpose: Put computied restarts on ${SCRATCHDIR}. |
---|
| 1194 | #D- File and target directory must exist. |
---|
| 1195 | #D-* Examples: |
---|
| 1196 | #D- |
---|
| 1197 | function IGCM_sys_PutBuffer_Rest { |
---|
| 1198 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Rest" $@ |
---|
| 1199 | if ( $DEBUG_sys ) ; then |
---|
| 1200 | echo "IGCM_sys_PutBuffer_Rest :" $@ |
---|
| 1201 | fi |
---|
| 1202 | if [ $DRYRUN = 0 ]; then |
---|
| 1203 | if [ ! -f ${1} ] ; then |
---|
| 1204 | echo "ERROR : IGCM_sys_PutBuffer_Rest ${1} DOES NOT EXIST ." |
---|
| 1205 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 1206 | fi |
---|
| 1207 | |
---|
[717] | 1208 | typeset status |
---|
[544] | 1209 | # |
---|
| 1210 | if [ X${JobType} = XRUN ] ; then |
---|
| 1211 | IGCM_sys_Chmod 444 ${1} |
---|
| 1212 | fi |
---|
| 1213 | |
---|
| 1214 | # |
---|
| 1215 | # USUAL WAY |
---|
| 1216 | \cp $1 $2 > out_rsync 2>&1 |
---|
[717] | 1217 | status=$? |
---|
[544] | 1218 | |
---|
[717] | 1219 | if [ ${status} -gt 0 ] ; then |
---|
| 1220 | echo "IGCM_sys_PutBuffer_Rest : error code ${status}" |
---|
[544] | 1221 | cat out_rsync |
---|
| 1222 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 1223 | else |
---|
| 1224 | \rm out_rsync |
---|
| 1225 | fi |
---|
| 1226 | fi |
---|
| 1227 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Rest" |
---|
| 1228 | } |
---|
| 1229 | |
---|
| 1230 | #D-#================================================== |
---|
[801] | 1231 | #D-function IGCM_sys_PrepareTaredRestart |
---|
| 1232 | #D-* Purpose: Prepare tared restart to be access by computing job. Identity here. |
---|
| 1233 | #D-* Examples: |
---|
| 1234 | #D- |
---|
| 1235 | function IGCM_sys_PrepareTaredRestart { |
---|
| 1236 | IGCM_debug_PushStack "IGCM_sys_PrepareTaredRestart" $@ |
---|
| 1237 | echo $1 |
---|
| 1238 | IGCM_debug_PopStack "IGCM_sys_PrepareTaredRestart" |
---|
| 1239 | } |
---|
| 1240 | |
---|
| 1241 | #D-#================================================== |
---|
[222] | 1242 | #D-function IGCM_sys_Put_Out |
---|
[544] | 1243 | #D-* Purpose: Copy a file on ${ARCHIVE} after having chmod it in readonly |
---|
[222] | 1244 | #D-* Examples: |
---|
| 1245 | #D- |
---|
| 1246 | function IGCM_sys_Put_Out { |
---|
[544] | 1247 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
| 1248 | if ( $DEBUG_sys ) ; then |
---|
| 1249 | echo "IGCM_sys_Put_Out :" $@ |
---|
| 1250 | fi |
---|
[676] | 1251 | |
---|
[717] | 1252 | typeset NB_ESSAI DELAI status i exist skip |
---|
[676] | 1253 | |
---|
| 1254 | # number of tentative |
---|
| 1255 | NB_ESSAI=3 |
---|
| 1256 | # time delay between tentative |
---|
| 1257 | DELAI=2 |
---|
| 1258 | |
---|
[544] | 1259 | if [ $DRYRUN = 0 ]; then |
---|
| 1260 | if [ ! -f ${1} ] ; then |
---|
| 1261 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
| 1262 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1263 | return 1 |
---|
[222] | 1264 | fi |
---|
[544] | 1265 | # |
---|
| 1266 | IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
| 1267 | # |
---|
[222] | 1268 | |
---|
[544] | 1269 | #===================================================== |
---|
| 1270 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 1271 | #===================================================== |
---|
[222] | 1272 | |
---|
[544] | 1273 | #echo ${2} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 1274 | #if [ $? -eq 0 ] ; then |
---|
| 1275 | # typeset WORKPATH FILEPATH |
---|
| 1276 | # WORKPATH=$( dirname $2 | sed -e "s|${R_OUT}|${R_BUF}|" ) |
---|
[623] | 1277 | # IGCM_sys_MkdirWork ${WORKPATH} |
---|
[544] | 1278 | # FILEPATH=${WORKPATH}/$( basename $2 ) |
---|
| 1279 | # # |
---|
| 1280 | # IGCM_sys_Cp ${1} ${FILEPATH} |
---|
| 1281 | #fi |
---|
[222] | 1282 | |
---|
[544] | 1283 | if [ X${JobType} = XRUN ] ; then |
---|
| 1284 | if [ X${3} = X ] ; then |
---|
[623] | 1285 | IGCM_sys_Chmod 444 ${1} |
---|
[544] | 1286 | fi |
---|
| 1287 | fi |
---|
| 1288 | # |
---|
[676] | 1289 | |
---|
[717] | 1290 | exist=false |
---|
| 1291 | skip=false |
---|
| 1292 | if [ -f $2 ] ; then |
---|
| 1293 | IGCM_debug_Print 1 "$2 already exist" |
---|
| 1294 | #dmget $2 |
---|
| 1295 | ccc_hsm get $2 |
---|
| 1296 | exist=true |
---|
| 1297 | if [ "X$( diff $1 $2 )" = X ] ; then |
---|
| 1298 | IGCM_debug_Print 2 "$1 and $2 are the same file, we skip the copy" |
---|
| 1299 | skip=true |
---|
[676] | 1300 | else |
---|
[717] | 1301 | IGCM_debug_Print 2 "$1 and $2 are not the same file, we force the copy" |
---|
| 1302 | skip=false |
---|
[676] | 1303 | fi |
---|
[717] | 1304 | fi |
---|
| 1305 | # |
---|
| 1306 | if ( [ X${exist} = Xtrue ] && [ X${skip} = Xfalse ] ) ; then |
---|
| 1307 | IGCM_sys_Chmod u+w $2 |
---|
| 1308 | fi |
---|
[222] | 1309 | |
---|
[717] | 1310 | if [ X${skip} = Xfalse ] ; then |
---|
[719] | 1311 | i=0 |
---|
[717] | 1312 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1313 | # USUAL WAY |
---|
| 1314 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1315 | status=$? |
---|
| 1316 | if [ ${status} -gt 0 ]; then |
---|
| 1317 | IGCM_debug_Print 2 "IGCM_sys_Put_Out : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1318 | IGCM_debug_Print 2 "IGCM_sys_Put_Out : sleep ${DELAI} seconds and try again." |
---|
[729] | 1319 | if [ -f $2 ] ; then |
---|
| 1320 | if [ "X$( diff $1 $2 )" = X ] ; then |
---|
| 1321 | IGCM_debug_Print 2 "$1 and $2 are the same file" |
---|
| 1322 | IGCM_debug_Print 2 "Cp gave an error but the file has been copied properly!" |
---|
[745] | 1323 | status=0 |
---|
| 1324 | \rm out_rsync |
---|
[729] | 1325 | break |
---|
| 1326 | else |
---|
| 1327 | IGCM_debug_Print 2 "$1 and $2 are not the same file, we continue to try" |
---|
[730] | 1328 | \rm $2 |
---|
[729] | 1329 | fi |
---|
| 1330 | fi |
---|
[717] | 1331 | sleep $DELAI |
---|
| 1332 | else |
---|
| 1333 | break |
---|
| 1334 | fi |
---|
| 1335 | (( i = i + 1 )) |
---|
| 1336 | done |
---|
| 1337 | fi |
---|
| 1338 | |
---|
[623] | 1339 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1340 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1341 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[222] | 1342 | |
---|
[623] | 1343 | # #RSYNC WITH NFS USE |
---|
| 1344 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1345 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[222] | 1346 | |
---|
[717] | 1347 | # status=$? |
---|
| 1348 | # IGCM_sys_Rsync_out $status |
---|
[222] | 1349 | |
---|
[623] | 1350 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
[717] | 1351 | # (( status=status+$? )) |
---|
[222] | 1352 | |
---|
[717] | 1353 | if [ ${status} -gt 0 ] ; then |
---|
[544] | 1354 | echo "IGCM_sys_Put_Out : error." |
---|
| 1355 | cat out_rsync |
---|
| 1356 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
[222] | 1357 | else |
---|
[544] | 1358 | \rm out_rsync |
---|
[222] | 1359 | fi |
---|
[544] | 1360 | fi |
---|
| 1361 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1362 | return 0 |
---|
[222] | 1363 | } |
---|
| 1364 | |
---|
| 1365 | #D-#================================================== |
---|
[544] | 1366 | #D-function IGCM_sys_PutBuffer_Out |
---|
| 1367 | #D-* Purpose: Copy a file on ${SCRATCHDIR} after having chmod it in readonly |
---|
| 1368 | #D-* Examples: |
---|
| 1369 | #D- |
---|
| 1370 | function IGCM_sys_PutBuffer_Out { |
---|
| 1371 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Out" $@ |
---|
| 1372 | if ( $DEBUG_sys ) ; then |
---|
| 1373 | echo "IGCM_sys_PutBuffer_Out :" $@ |
---|
| 1374 | fi |
---|
[717] | 1375 | |
---|
[725] | 1376 | typeset NB_ESSAI DELAI status i exist skip |
---|
[717] | 1377 | |
---|
| 1378 | # number of tentative |
---|
| 1379 | NB_ESSAI=3 |
---|
| 1380 | # time delay between tentative |
---|
| 1381 | DELAI=2 |
---|
| 1382 | |
---|
[544] | 1383 | if [ $DRYRUN = 0 ]; then |
---|
| 1384 | if [ ! -f ${1} ] ; then |
---|
| 1385 | echo "WARNING : IGCM_sys_PutBuffer_Out ${1} DOES NOT EXIST ." |
---|
| 1386 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1387 | return 1 |
---|
| 1388 | fi |
---|
| 1389 | # |
---|
| 1390 | IGCM_sys_Mkdir $( dirname $2 ) |
---|
| 1391 | # |
---|
| 1392 | |
---|
| 1393 | if [ X${JobType} = XRUN ] ; then |
---|
| 1394 | if [ X${3} = X ] ; then |
---|
[623] | 1395 | IGCM_sys_Chmod 444 ${1} |
---|
[544] | 1396 | fi |
---|
| 1397 | fi |
---|
[717] | 1398 | |
---|
| 1399 | exist=false |
---|
| 1400 | skip=false |
---|
| 1401 | if [ -f $2 ] ; then |
---|
| 1402 | IGCM_debug_Print 1 "$2 already exist" |
---|
| 1403 | exist=true |
---|
| 1404 | if [ "X$( diff $1 $2 )" = X ] ; then |
---|
| 1405 | IGCM_debug_Print 2 "$1 and $2 are the same file, we skip the copy" |
---|
| 1406 | skip=true |
---|
| 1407 | else |
---|
| 1408 | IGCM_debug_Print 2 "$1 and $2 are not the same file, we force the copy" |
---|
| 1409 | skip=false |
---|
| 1410 | fi |
---|
| 1411 | fi |
---|
[544] | 1412 | # |
---|
[717] | 1413 | if ( [ X${exist} = Xtrue ] && [ X${skip} = Xfalse ] ) ; then |
---|
| 1414 | IGCM_sys_Chmod u+w $2 |
---|
| 1415 | fi |
---|
[544] | 1416 | |
---|
[717] | 1417 | if [ X${skip} = Xfalse ] ; then |
---|
| 1418 | i=0 |
---|
| 1419 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1420 | # USUAL WAY |
---|
| 1421 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1422 | status=$? |
---|
| 1423 | if [ ${status} -gt 0 ]; then |
---|
| 1424 | IGCM_debug_Print 2 "IGCM_sys_PutBuffer_Out : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1425 | IGCM_debug_Print 2 "IGCM_sys_PutBuffer_Out : sleep ${DELAI} seconds and try again." |
---|
| 1426 | sleep $DELAI |
---|
| 1427 | else |
---|
| 1428 | break |
---|
| 1429 | fi |
---|
| 1430 | (( i = i + 1 )) |
---|
| 1431 | done |
---|
| 1432 | fi |
---|
| 1433 | |
---|
| 1434 | if [ ${status} -gt 0 ] ; then |
---|
[544] | 1435 | echo "IGCM_sys_PutBuffer_Out : error." |
---|
| 1436 | cat out_rsync |
---|
| 1437 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Out" |
---|
| 1438 | else |
---|
| 1439 | \rm out_rsync |
---|
| 1440 | fi |
---|
| 1441 | fi |
---|
| 1442 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1443 | return 0 |
---|
| 1444 | } |
---|
| 1445 | |
---|
| 1446 | #D-#================================================== |
---|
[222] | 1447 | #D-function IGCM_sys_Get |
---|
| 1448 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
| 1449 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
| 1450 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
| 1451 | function IGCM_sys_Get { |
---|
[544] | 1452 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
[222] | 1453 | |
---|
[719] | 1454 | typeset DEST dm_liste ifile target file_work |
---|
[676] | 1455 | typeset NB_ESSAI DELAI status i |
---|
[222] | 1456 | |
---|
[544] | 1457 | if ( $DEBUG_sys ) ; then |
---|
| 1458 | echo "IGCM_sys_Get :" $@ |
---|
| 1459 | fi |
---|
[676] | 1460 | |
---|
| 1461 | # number of tentative |
---|
| 1462 | NB_ESSAI=3 |
---|
| 1463 | # time delay between tentative |
---|
| 1464 | DELAI=2 |
---|
| 1465 | |
---|
[544] | 1466 | if [ $DRYRUN -le 2 ]; then |
---|
| 1467 | if [ X${1} = X'/l' ] ; then |
---|
| 1468 | # test if the first file is present in the old computation : |
---|
| 1469 | eval set +A dm_liste \${${2}} |
---|
| 1470 | else |
---|
| 1471 | eval set +A dm_liste ${1} |
---|
[222] | 1472 | fi |
---|
[544] | 1473 | eval DEST=\${${#}} |
---|
[222] | 1474 | |
---|
[544] | 1475 | #===================================================== |
---|
| 1476 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 1477 | #===================================================== |
---|
[222] | 1478 | |
---|
[544] | 1479 | # Is it an R_OUT file (not R_IN) ? |
---|
| 1480 | #echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 1481 | #if [ $? -eq 0 ] ; then |
---|
| 1482 | # # Yes ? then we try to get it in SCRATCHDIR |
---|
| 1483 | # set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_BUF}|g" ) |
---|
| 1484 | # if [ -f ${file_work[0]} ] ; then |
---|
| 1485 | # IGCM_sys_Cp ${file_work[*]} ${DEST} |
---|
| 1486 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 1487 | # return |
---|
| 1488 | # fi |
---|
| 1489 | #fi |
---|
[222] | 1490 | |
---|
[587] | 1491 | ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1 |
---|
[717] | 1492 | status=$? |
---|
| 1493 | if [ ${status} -gt 0 ] ; then |
---|
| 1494 | echo "WARNING IGCM_sys_Get : error code ${status}" |
---|
[544] | 1495 | cat out_rsync |
---|
| 1496 | echo "WARNING IGCM_sys_Get : will stop later if the cp fails." |
---|
| 1497 | fi |
---|
[222] | 1498 | |
---|
[717] | 1499 | #if [ ${status} -gt 0 ] ; then |
---|
[544] | 1500 | # if [ ! "X$( grep "Lost dmusrcmd connection" out_rsync )" = "X" ] ; then |
---|
| 1501 | # cat out_rsync |
---|
| 1502 | # echo "WARNING IGCM_sys_Get : Lost dmusrcmd connection : " |
---|
| 1503 | # sleep 30 |
---|
| 1504 | # echo "We try another time" |
---|
[587] | 1505 | ## dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
| 1506 | # ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1 |
---|
[717] | 1507 | # status=$? |
---|
| 1508 | # if [ ${status} -gt 0 ] ; then |
---|
[623] | 1509 | # echo "ERROR IGCM_sys_Get : again demigration error :" |
---|
| 1510 | # cat out_rsync |
---|
| 1511 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
[544] | 1512 | # fi |
---|
| 1513 | # else |
---|
| 1514 | # echo "ERROR IGCM_sys_Get : demigration error :" |
---|
| 1515 | # cat out_rsync |
---|
| 1516 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1517 | # fi |
---|
| 1518 | #fi |
---|
[520] | 1519 | |
---|
[719] | 1520 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1521 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1522 | # ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
| 1523 | |
---|
| 1524 | # #RSYNC WITH NFS USE |
---|
| 1525 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1526 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
| 1527 | |
---|
| 1528 | # status=$? |
---|
| 1529 | # IGCM_sys_Rsync_out $status |
---|
| 1530 | |
---|
| 1531 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1532 | # (( status=status+$? )) |
---|
| 1533 | |
---|
[544] | 1534 | #USUAL WAY |
---|
| 1535 | if [ X${1} = X'/l' ] ; then |
---|
| 1536 | for target in ${dm_liste[*]} ; do |
---|
[623] | 1537 | local_file=$( basename ${target} ) |
---|
[676] | 1538 | # test if the target file is present before the loop |
---|
| 1539 | IGCM_sys_TestFileArchive ${target} |
---|
[717] | 1540 | status=$? |
---|
| 1541 | if [ ${status} -gt 0 ] ; then |
---|
[705] | 1542 | echo "IGCM_sys_Get, ERROR : regular file ${target} DOES NOT EXIST ." |
---|
[676] | 1543 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1544 | else |
---|
[719] | 1545 | i=0 |
---|
[676] | 1546 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1547 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1548 | status=$? |
---|
| 1549 | if [ ${status} -gt 0 ]; then |
---|
[717] | 1550 | IGCM_debug_Print 2 "IGCM_sys_Get : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1551 | IGCM_debug_Print 2 "IGCM_sys_Get : sleep ${DELAI} seconds and try again." |
---|
| 1552 | sleep $DELAI |
---|
[676] | 1553 | else |
---|
[717] | 1554 | break |
---|
[676] | 1555 | fi |
---|
| 1556 | (( i = i + 1 )) |
---|
| 1557 | done |
---|
[719] | 1558 | if [ ${status} -gt 0 ] ; then |
---|
| 1559 | echo "IGCM_sys_Get : error" |
---|
| 1560 | cat out_rsync |
---|
| 1561 | \rm out_rsync |
---|
| 1562 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1563 | else |
---|
| 1564 | \rm out_rsync |
---|
| 1565 | fi |
---|
[676] | 1566 | fi |
---|
[544] | 1567 | done |
---|
| 1568 | else |
---|
[719] | 1569 | i=0 |
---|
| 1570 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1571 | \cp ${dm_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1572 | status=$? |
---|
| 1573 | if [ ${status} -gt 0 ]; then |
---|
| 1574 | IGCM_debug_Print 2 "IGCM_sys_Get : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1575 | IGCM_debug_Print 2 "IGCM_sys_Get : sleep ${DELAI} seconds and try again." |
---|
| 1576 | sleep $DELAI |
---|
| 1577 | else |
---|
| 1578 | break |
---|
| 1579 | fi |
---|
| 1580 | (( i = i + 1 )) |
---|
| 1581 | done |
---|
| 1582 | if [ ${status} -gt 0 ] ; then |
---|
| 1583 | echo "IGCM_sys_Get : error" |
---|
| 1584 | cat out_rsync |
---|
| 1585 | \rm out_rsync |
---|
| 1586 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1587 | else |
---|
| 1588 | \rm out_rsync |
---|
| 1589 | fi |
---|
[544] | 1590 | fi |
---|
| 1591 | fi |
---|
| 1592 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
[222] | 1593 | } |
---|
| 1594 | |
---|
| 1595 | #D-#================================================== |
---|
[544] | 1596 | #D-function IGCM_sys_GetBuffer |
---|
| 1597 | #D-* Purpose: Get a file from ${SCRATCHDIR} |
---|
| 1598 | #D-* Examples: IGCM_sys_GetBuffer myfile /destpath/myfile_with_PREFIX |
---|
| 1599 | #D- IGCM_sys_GetBuffer /l Array_contain_myfiles /destpath/ |
---|
| 1600 | function IGCM_sys_GetBuffer { |
---|
| 1601 | IGCM_debug_PushStack "IGCM_sys_GetBuffer" $@ |
---|
| 1602 | |
---|
[719] | 1603 | typeset DEST buf_liste ifile target file_work |
---|
| 1604 | typeset NB_ESSAI DELAI status i |
---|
[544] | 1605 | |
---|
| 1606 | if ( $DEBUG_sys ) ; then |
---|
| 1607 | echo "IGCM_sys_GetBuffer :" $@ |
---|
| 1608 | fi |
---|
[719] | 1609 | |
---|
| 1610 | # number of tentative |
---|
| 1611 | NB_ESSAI=3 |
---|
| 1612 | # time delay between tentative |
---|
| 1613 | DELAI=2 |
---|
| 1614 | |
---|
[544] | 1615 | if [ $DRYRUN -le 2 ]; then |
---|
| 1616 | if [ X${1} = X'/l' ] ; then |
---|
| 1617 | # test if the first file is present in the old computation : |
---|
| 1618 | eval set +A buf_liste \${${2}} |
---|
| 1619 | else |
---|
| 1620 | eval set +A buf_liste ${1} |
---|
| 1621 | fi |
---|
| 1622 | eval DEST=\${${#}} |
---|
| 1623 | |
---|
| 1624 | #USUAL WAY |
---|
| 1625 | if [ X${1} = X'/l' ] ; then |
---|
| 1626 | for target in ${buf_liste[*]} ; do |
---|
[623] | 1627 | local_file=$( basename ${target} ) |
---|
[719] | 1628 | i=0 |
---|
| 1629 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1630 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1631 | status=$? |
---|
| 1632 | if [ ${status} -gt 0 ]; then |
---|
| 1633 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1634 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : sleep ${DELAI} seconds and try again." |
---|
| 1635 | sleep $DELAI |
---|
| 1636 | else |
---|
| 1637 | break |
---|
| 1638 | fi |
---|
| 1639 | (( i = i + 1 )) |
---|
| 1640 | done |
---|
| 1641 | if [ ${status} -gt 0 ] ; then |
---|
| 1642 | echo "IGCM_sys_Get : error" |
---|
| 1643 | cat out_rsync |
---|
| 1644 | \rm out_rsync |
---|
| 1645 | IGCM_debug_Exit "IGCM_sys_GetBuffer" |
---|
| 1646 | else |
---|
| 1647 | \rm out_rsync |
---|
| 1648 | fi |
---|
[544] | 1649 | done |
---|
| 1650 | else |
---|
[719] | 1651 | i=0 |
---|
| 1652 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1653 | \cp ${buf_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1654 | status=$? |
---|
| 1655 | if [ ${status} -gt 0 ]; then |
---|
| 1656 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1657 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : sleep ${DELAI} seconds and try again." |
---|
| 1658 | sleep $DELAI |
---|
| 1659 | else |
---|
| 1660 | break |
---|
| 1661 | fi |
---|
| 1662 | (( i = i + 1 )) |
---|
| 1663 | done |
---|
| 1664 | if [ ${status} -gt 0 ] ; then |
---|
| 1665 | echo "IGCM_sys_Get : error" |
---|
| 1666 | cat out_rsync |
---|
| 1667 | \rm out_rsync |
---|
| 1668 | IGCM_debug_Exit "IGCM_sys_GetBuffer" |
---|
| 1669 | else |
---|
| 1670 | \rm out_rsync |
---|
| 1671 | fi |
---|
[544] | 1672 | fi |
---|
| 1673 | fi |
---|
| 1674 | IGCM_debug_PopStack "IGCM_sys_GetBuffer" |
---|
| 1675 | } |
---|
| 1676 | |
---|
| 1677 | #D-#================================================== |
---|
[222] | 1678 | #D-function IGCM_sys_GetDate_FichWork |
---|
| 1679 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
| 1680 | #D-* Examples: |
---|
| 1681 | #D- |
---|
| 1682 | function IGCM_sys_GetDate_FichWork { |
---|
[544] | 1683 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
| 1684 | if ( $DEBUG_sys ) ; then |
---|
| 1685 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
| 1686 | fi |
---|
| 1687 | typeset dateF |
---|
| 1688 | set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
| 1689 | eval ${2}=${dateF[5]} |
---|
[538] | 1690 | |
---|
[222] | 1691 | # donne la date filesys d'un fichier sur la machine work |
---|
[544] | 1692 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
[222] | 1693 | } |
---|
| 1694 | |
---|
| 1695 | #D-#================================================== |
---|
| 1696 | #D-function IGCM_sys_GetDate_FichArchive |
---|
[623] | 1697 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
[222] | 1698 | #D-* Examples: |
---|
| 1699 | #D- |
---|
| 1700 | function IGCM_sys_GetDate_FichArchive { |
---|
[544] | 1701 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
| 1702 | if ( $DEBUG_sys ) ; then |
---|
| 1703 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
| 1704 | fi |
---|
| 1705 | typeset dateF |
---|
| 1706 | set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
| 1707 | eval ${2}=${dateF[5]} |
---|
| 1708 | |
---|
| 1709 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
| 1710 | } |
---|
| 1711 | |
---|
| 1712 | #D-#================================================== |
---|
| 1713 | #D-function IGCM_sys_Dods_Rm |
---|
| 1714 | #D-* Purpose: DO NOTHING ! Put ${ARCHIVE} files on DODS internet protocole. |
---|
| 1715 | #D-* Examples: |
---|
| 1716 | #D- |
---|
| 1717 | function IGCM_sys_Dods_Rm { |
---|
| 1718 | if ( $DEBUG_sys ) ; then |
---|
| 1719 | echo "IGCM_sys_Dods_Rm :" $@ |
---|
| 1720 | fi |
---|
[717] | 1721 | typeset status |
---|
[544] | 1722 | if [ $DRYRUN = 0 ]; then |
---|
[591] | 1723 | |
---|
| 1724 | # if [ ! -d /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} ] ; then |
---|
| 1725 | # echo "WARNING : IGCM_sys_Dods_Rm /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} DOES NOT EXIST ." |
---|
| 1726 | # echo "Nothing has been done." |
---|
| 1727 | # return |
---|
| 1728 | # fi |
---|
| 1729 | |
---|
[649] | 1730 | /ccc/cont003/home/dsm/p86ipsl/bin/dods_rm public/${LOGIN}/${R_DODS}/${1} # > out_dods_rm 2>&1 |
---|
[717] | 1731 | status=$? |
---|
[623] | 1732 | |
---|
[717] | 1733 | # if [ ${status} -gt 0 ] ; then |
---|
[623] | 1734 | # echo "IGCM_sys_Dods_Rm : error." |
---|
| 1735 | # cat out_dods_rm |
---|
| 1736 | # IGCM_debug_Exit "IGCM_sys_Dods_Rm" |
---|
[544] | 1737 | # else |
---|
[623] | 1738 | # rm out_dods_rm |
---|
[544] | 1739 | # fi |
---|
[538] | 1740 | |
---|
[544] | 1741 | fi |
---|
[717] | 1742 | return $status |
---|
[222] | 1743 | } |
---|
| 1744 | |
---|
[544] | 1745 | #D-#================================================== |
---|
| 1746 | #D-function IGCM_sys_Dods_Cp |
---|
| 1747 | #D-* Purpose: Copy $(ARCHIVE) files on DODS internet protocole. |
---|
| 1748 | #D-* Examples: |
---|
| 1749 | #D- |
---|
| 1750 | function IGCM_sys_Dods_Cp { |
---|
| 1751 | if ( $DEBUG_sys ) ; then |
---|
| 1752 | echo "IGCM_sys_Dods_Cp :" $@ |
---|
| 1753 | fi |
---|
[717] | 1754 | typeset status |
---|
[544] | 1755 | if [ $DRYRUN = 0 ]; then |
---|
[591] | 1756 | |
---|
| 1757 | # if [ ! -d ${R_SAVE}/${1} ] ; then |
---|
| 1758 | # echo "WARNING : IGCM_sys_Dods_Cp ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
| 1759 | # echo "Nothing has been done." |
---|
| 1760 | # return |
---|
| 1761 | # fi |
---|
| 1762 | |
---|
[649] | 1763 | /ccc/cont003/home/dsm/p86ipsl/bin/dods_cp ${1} public/${LOGIN}/${R_DODS} # > out_dods_cp 2>&1 |
---|
[717] | 1764 | status=$? |
---|
[544] | 1765 | |
---|
[717] | 1766 | # if [ ${status} -gt 0 ] ; then |
---|
[623] | 1767 | # echo "IGCM_sys_Dods_Cp : error." |
---|
| 1768 | # cat out_dods_cp |
---|
| 1769 | # IGCM_debug_Exit "IGCM_sys_Dods_Cp" |
---|
| 1770 | # else |
---|
| 1771 | # rm out_dods_cp |
---|
| 1772 | # fi |
---|
[544] | 1773 | |
---|
| 1774 | fi |
---|
[717] | 1775 | return $status |
---|
[544] | 1776 | } |
---|
| 1777 | |
---|
| 1778 | #D-#================================================== |
---|
| 1779 | #D-function IGCM_sys_Put_Dods |
---|
| 1780 | #D-* Purpose: Put $(ARCHIVE) files on DODS internet protocole. |
---|
| 1781 | #D-* Examples: |
---|
| 1782 | #D- |
---|
| 1783 | function IGCM_sys_Put_Dods { |
---|
| 1784 | IGCM_debug_PushStack "IGCM_sys_Put_Dods" $@ |
---|
| 1785 | if ( $DEBUG_sys ) ; then |
---|
| 1786 | echo "IGCM_sys_Put_Dods :" $@ |
---|
| 1787 | fi |
---|
[717] | 1788 | #set -vx |
---|
| 1789 | typeset status |
---|
[544] | 1790 | if [ $DRYRUN = 0 ]; then |
---|
[587] | 1791 | if ( [ ! -d ${R_SAVE}/${1} ] && [ ! -d ${R_FIGR}/${1} ] ) ; then |
---|
| 1792 | echo "WARNING IGCM_sys_Put_Dods : None of the following directories exist. Exactly one should." |
---|
| 1793 | echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} DOES NOT EXIST." |
---|
| 1794 | echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} DOES NOT EXIST." |
---|
[544] | 1795 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1796 | return |
---|
| 1797 | fi |
---|
| 1798 | |
---|
[587] | 1799 | if ( [ -d ${R_SAVE}/${1} ] && [ -d ${R_FIGR}/${1} ] ) ; then |
---|
| 1800 | echo "WARNING IGCM_sys_Put_Dods : Both of the following directories exist. Exactly one should." |
---|
| 1801 | echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} EXISTS." |
---|
| 1802 | echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} EXISTS." |
---|
| 1803 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1804 | return |
---|
| 1805 | fi |
---|
| 1806 | # |
---|
| 1807 | if [ -d ${R_SAVE}/${1} ] ; then |
---|
| 1808 | cd ${R_SAVE} |
---|
| 1809 | elif [ -d ${R_FIGR}/${1} ] ; then |
---|
| 1810 | cd ${R_FIGR} |
---|
| 1811 | fi |
---|
| 1812 | |
---|
[544] | 1813 | IGCM_sys_Dods_Rm ${1} |
---|
| 1814 | IGCM_sys_Dods_Cp ${1} |
---|
[717] | 1815 | status=0 |
---|
[623] | 1816 | |
---|
[717] | 1817 | if [ ${status} -gt 0 ] ; then |
---|
[544] | 1818 | echo "IGCM_sys_Put_Dods : error." |
---|
| 1819 | IGCM_debug_Exit "IGCM_sys_Put_Dods" |
---|
| 1820 | fi |
---|
| 1821 | fi |
---|
| 1822 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1823 | } |
---|
| 1824 | |
---|
[222] | 1825 | ############################################################## |
---|
| 1826 | # REBUILD OPERATOR |
---|
| 1827 | |
---|
| 1828 | function IGCM_sys_rebuild { |
---|
[544] | 1829 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
| 1830 | if ( $DEBUG_sys ) ; then |
---|
| 1831 | echo "IGCM_sys_rebuild :" $@ |
---|
| 1832 | fi |
---|
[717] | 1833 | |
---|
[734] | 1834 | typeset NB_ESSAI DELAI status i firstArg |
---|
[717] | 1835 | # number of tentative |
---|
| 1836 | NB_ESSAI=3 |
---|
| 1837 | # time delay between tentative |
---|
| 1838 | DELAI=2 |
---|
| 1839 | |
---|
| 1840 | i=0 |
---|
| 1841 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1842 | /home/cont003/p86ipsl/X64/bin/rebuild -f -o $@ > out_rsync 2>&1 |
---|
| 1843 | status=$? |
---|
| 1844 | if [ ${status} -gt 0 ] ; then |
---|
| 1845 | IGCM_debug_Print 2 "IGCM_sys_rebuild : error code ${status}" |
---|
| 1846 | cat out_rsync |
---|
| 1847 | \rm out_rsync |
---|
| 1848 | IGCM_debug_Print 2 "IGCM_sys_rebuild : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[734] | 1849 | firstArg=${1} |
---|
| 1850 | \rm ${firstArg} |
---|
[733] | 1851 | sleep $DELAI |
---|
[717] | 1852 | else |
---|
| 1853 | \rm out_rsync |
---|
| 1854 | break |
---|
| 1855 | fi |
---|
| 1856 | (( i = i + 1 )) |
---|
| 1857 | done |
---|
| 1858 | |
---|
[725] | 1859 | if [ ${status} -gt 0 ] ; then |
---|
[717] | 1860 | echo "IGCM_sys_rebuild : rebuild error" |
---|
[544] | 1861 | IGCM_debug_Exit "rebuild" |
---|
| 1862 | fi |
---|
[222] | 1863 | |
---|
[544] | 1864 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
[222] | 1865 | } |
---|
| 1866 | |
---|
[697] | 1867 | function IGCM_sys_rebuild_station { |
---|
| 1868 | IGCM_debug_PushStack "IGCM_sys_rebuild_station" -- $@ |
---|
| 1869 | typeset i list_opt file_in file_out prefix_invert list_invert |
---|
| 1870 | if ( $DEBUG_sys ) ; then |
---|
| 1871 | echo "IGCM_sys_rebuild_station :" $@ |
---|
| 1872 | fi |
---|
| 1873 | list_opt=$@ |
---|
| 1874 | |
---|
[725] | 1875 | # Invert Axis : t,x -> x,t |
---|
[697] | 1876 | # t,pres,x -> x,t,pres |
---|
| 1877 | # So that we can concatenate along x |
---|
| 1878 | i=0 |
---|
| 1879 | for file_in in ${list_opt} ; do |
---|
| 1880 | (( i = i + 1)) |
---|
| 1881 | [ ${i} = 1 ] && file_out=${file_in} && continue |
---|
| 1882 | prefix_invert=$( basename ${file_in} .nc ) |
---|
| 1883 | IGCM_sys_ncpdq -a x,time_counter -a x,time_counter,presnivs ${file_in} ${prefix_invert}_xt.nc |
---|
| 1884 | list_invert[${#list_invert[*]}]=${prefix_invert}_xt.nc |
---|
| 1885 | done |
---|
| 1886 | |
---|
| 1887 | # Concatenate |
---|
| 1888 | IGCM_sys_ncrcat ${list_invert[*]} histstn_xt.nc |
---|
| 1889 | |
---|
| 1890 | # Re-ivert file |
---|
| 1891 | IGCM_sys_ncpdq -a time_counter,x -a time_counter,presnivs,x histstn_xt.nc ${file_out} |
---|
| 1892 | |
---|
| 1893 | # Station re-ordering is too expansive to be run within libICGM |
---|
| 1894 | # This is due to (ncpdq - nrcat - ncpdq) I/O sequence. |
---|
| 1895 | # This re-ordering must be done "in memory" by the cmorization process |
---|
| 1896 | # Anyway this is the best sequence using (ncpdq - nrcat - ncpdq) |
---|
| 1897 | # BEGIN reordering |
---|
| 1898 | |
---|
| 1899 | # Only LMDZ text output contains the exact ordering of the station. |
---|
| 1900 | # We isolate this in the code below: |
---|
| 1901 | # 0 38 -157.5000000000000 70.98591549295774 |
---|
| 1902 | # 0 54 27.49999999999999 67.18309859154928 |
---|
| 1903 | # 0 56 -62.50000000000001 82.39436619718309 |
---|
| 1904 | # 0 79 12.49999999999999 78.59154929577466 |
---|
| 1905 | # 0 116 -165.0000000000000 76.05633802816901 |
---|
| 1906 | # 0 117 130.0000000000000 70.98591549295774 |
---|
| 1907 | # 0 118 110.0000000000000 87.46478873239437 |
---|
| 1908 | # 1 40 4.999999999999995 51.97183098591550 |
---|
| 1909 | # typeset iStation iProc list_opt file_in file_out prefix_invert |
---|
| 1910 | # typeset -Z4 j4 |
---|
| 1911 | # typeset -Z3 j3 |
---|
| 1912 | |
---|
| 1913 | # unset list_opt |
---|
| 1914 | # set +A list_opt $@ |
---|
| 1915 | |
---|
| 1916 | # Filename after rebuild |
---|
| 1917 | # file_out=${list_opt[0]} |
---|
| 1918 | # Prefix of output files |
---|
| 1919 | # prefix_invert=$( basename ${file_out} .nc ) |
---|
| 1920 | # Number of procs |
---|
| 1921 | # num_proc=$( grep -i mpi_size ${PREFIX}_${Exe_Output} | wc -l ) |
---|
| 1922 | |
---|
| 1923 | # iProc=0 |
---|
| 1924 | # while [ ${iProc} -lt ${num_proc} ] ; do |
---|
| 1925 | # Array containing Station as a number |
---|
| 1926 | # unset proc_stn |
---|
| 1927 | # set +A proc_stn $( grep "iophy_mpi rank ip lon lat $iProc" ${PREFIX}_${Exe_Output} | sed -e "s/iophy_mpi rank ip lon lat //g" | awk ' {print $2}' ) |
---|
| 1928 | # Number of stations produced by processor proc |
---|
| 1929 | # stationLast=${#proc_stn[*]} |
---|
| 1930 | # Proc number on 4 digits |
---|
| 1931 | # j4=${iProc} |
---|
| 1932 | # Init |
---|
| 1933 | # iStation=0 |
---|
| 1934 | # while [ ${iStation} -lt ${stationLast} ] ; do |
---|
| 1935 | # Station number on 3 digits |
---|
| 1936 | # j3=${proc_stn[${iStation}]} |
---|
| 1937 | # Extract station |
---|
[725] | 1938 | # Invert Axis : t,x -> x,t |
---|
[697] | 1939 | # t,pres,x -> x,t,pres |
---|
| 1940 | # So that we can concatenate along x |
---|
| 1941 | # IGCM_sys_ncpdq -a x,time_counter -a x,time_counter,presnivs -d x,$iStation,$iStation ${prefix_invert}_${j4}.nc ${prefix_invert}_stn_${j3}.nc |
---|
| 1942 | # (( iStation = iStation + 1 )) |
---|
| 1943 | # done |
---|
| 1944 | # (( iProc = iProc + 1 )) |
---|
| 1945 | # done |
---|
| 1946 | |
---|
| 1947 | # Concatenate all station along x |
---|
| 1948 | # IGCM_sys_ncrcat ${prefix_invert}_stn_???.nc ${prefix_invert}_xt.nc |
---|
| 1949 | |
---|
| 1950 | # Re-invert file |
---|
| 1951 | # IGCM_sys_ncpdq -a time_counter,x -a time_counter,presnivs,x ${prefix_invert}_xt.nc ${file_out} |
---|
| 1952 | |
---|
| 1953 | # END reordering |
---|
| 1954 | |
---|
| 1955 | IGCM_debug_PopStack "IGCM_sys_rebuild_station" |
---|
| 1956 | } |
---|
| 1957 | |
---|
[222] | 1958 | ############################################################ |
---|
| 1959 | # Activate Running Environnment Variables |
---|
| 1960 | |
---|
| 1961 | function IGCM_sys_activ_variables { |
---|
[544] | 1962 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
| 1963 | if ( $DEBUG_sys ) ; then |
---|
| 1964 | echo "IGCM_sys_activ_variables" |
---|
| 1965 | fi |
---|
[621] | 1966 | |
---|
| 1967 | ulimit -s unlimited |
---|
| 1968 | |
---|
[686] | 1969 | export KMP_STACKSIZE=3g |
---|
| 1970 | export KMP_LIBRARY=turnaround |
---|
| 1971 | export MKL_SERIAL=YES |
---|
| 1972 | unset MPI_PLACING_MODE |
---|
[623] | 1973 | |
---|
[687] | 1974 | # add module load nb of threads for core placement |
---|
| 1975 | (( max_omp = 0 )) |
---|
| 1976 | |
---|
| 1977 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 1978 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 1979 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
| 1980 | |
---|
| 1981 | # Only if we really have an executable for the component : |
---|
| 1982 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${comp}" != "XCPL" ] && [ "X${ExeNameOut}" != "Xinca.dat" ] ) ; then |
---|
| 1983 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
| 1984 | if [ ${comp_proc_omp_loc} -gt ${max_omp} ] ; then |
---|
| 1985 | (( max_omp = comp_proc_omp_loc )) |
---|
| 1986 | fi |
---|
| 1987 | fi |
---|
| 1988 | done |
---|
| 1989 | |
---|
| 1990 | ( [ X${max_omp} = X4 ] || [ X${max_omp} = X8 ] ) && { module load openmp/${max_omp}thds ; IGCM_debug_Print 1 "module load openmp/${max_omp}thds" ; } |
---|
| 1991 | |
---|
[544] | 1992 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
[222] | 1993 | } |
---|
| 1994 | |
---|
| 1995 | ############################################################ |
---|
| 1996 | # Desactivate Running Environnment Variables |
---|
| 1997 | |
---|
| 1998 | function IGCM_sys_desactiv_variables { |
---|
[544] | 1999 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
| 2000 | if ( $DEBUG_sys ) ; then |
---|
| 2001 | echo "IGCM_sys_desactiv_variables" |
---|
| 2002 | fi |
---|
| 2003 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
[222] | 2004 | } |
---|
| 2005 | |
---|
| 2006 | ############################################################ |
---|
[621] | 2007 | # Build MPI/OMP scripts run file (dummy function) |
---|
[222] | 2008 | |
---|
| 2009 | function IGCM_sys_build_run_file { |
---|
[621] | 2010 | |
---|
| 2011 | IGCM_debug_Print 3 " dummy function : IGCM_sys_build_run_file " |
---|
| 2012 | |
---|
| 2013 | } |
---|
| 2014 | |
---|
| 2015 | ############################################################ |
---|
| 2016 | # Build MPI/OMP scripts |
---|
[623] | 2017 | function IGCM_sys_build_execution_scripts |
---|
[621] | 2018 | { |
---|
| 2019 | IGCM_debug_PushStack "IGCM_sys_build_execution_scripts" $@ |
---|
[544] | 2020 | if ( $DEBUG_sys ) ; then |
---|
[621] | 2021 | echo "IGCM_sys_build_execution_scripts " $@ |
---|
[544] | 2022 | fi |
---|
[623] | 2023 | typeset nodes listnodes init_node start_num init_exec comp ExeNameIn ExeNameOut |
---|
| 2024 | typeset node_num_current node_current comp_proc_mpi_loc comp_proc_omp_loc |
---|
[621] | 2025 | typeset num_corempi nombre_restant_node nombre_restant_comp |
---|
[687] | 2026 | typeset IGCM_OMP |
---|
[395] | 2027 | |
---|
[621] | 2028 | if [ ! -f ${SUBMIT_DIR}/Job_${config_UserChoices_JobName} ] ; then |
---|
| 2029 | IGCM_debug_Exit "IGCM_sys_titane build_execution_scripts : Job_${config_UserChoices_JobName} doesn't exist in SUBMIT_DIR : ${SUBMIT_DIR} " |
---|
| 2030 | fi |
---|
[395] | 2031 | |
---|
[621] | 2032 | if ( ${OK_PARA_MPMD} ) ; then |
---|
| 2033 | |
---|
| 2034 | if [ -f run_file ] ; then |
---|
| 2035 | IGCM_sys_Rm -f run_file |
---|
| 2036 | fi |
---|
| 2037 | touch run_file |
---|
| 2038 | |
---|
| 2039 | if ( ${OK_PARA_OMP} ) ; then |
---|
| 2040 | |
---|
| 2041 | # Hosts treatment |
---|
| 2042 | |
---|
| 2043 | ${HOST_MPIRUN_COMMAND} hostname | sort | uniq > hosts.tmp |
---|
[623] | 2044 | |
---|
[621] | 2045 | i=0 |
---|
| 2046 | rm -f hosts |
---|
| 2047 | IGCM_debug_Print 1 "sys Titane, Hosts avaible :" |
---|
| 2048 | for nodes in `cat hosts.tmp` ; do |
---|
| 2049 | host[$i]=$nodes |
---|
| 2050 | echo "${host[$i]} slots=8 max_slots=8" >> hosts |
---|
| 2051 | IGCM_debug_Print 1 ${host[$i]} |
---|
| 2052 | i=$((i+1)) |
---|
| 2053 | done |
---|
| 2054 | rm -f hosts.tmp |
---|
[623] | 2055 | |
---|
[621] | 2056 | listnodes=${host[*]} |
---|
[623] | 2057 | |
---|
| 2058 | EXECUTION="${HOST_MPIRUN_COMMAND} -hostfile hosts" |
---|
| 2059 | |
---|
[621] | 2060 | # Initialisation |
---|
| 2061 | |
---|
| 2062 | init_node=y |
---|
| 2063 | node_num_current=0 |
---|
| 2064 | start_num=0 |
---|
| 2065 | init_exec=n |
---|
| 2066 | |
---|
| 2067 | # Test : if oasis is there, we put it at the first position |
---|
[623] | 2068 | |
---|
[621] | 2069 | for comp in ${config_ListOfComponents[*]} ; do |
---|
[623] | 2070 | |
---|
[621] | 2071 | if [ "X${comp}" = "XCPL" ] ; then |
---|
[623] | 2072 | |
---|
[621] | 2073 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 2074 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
[623] | 2075 | |
---|
[621] | 2076 | echo "#!/bin/ksh" > script_${ExeNameOut}.ksh |
---|
| 2077 | echo "" >> script_${ExeNameOut}.ksh |
---|
| 2078 | echo "export KMP_STACKSIZE=3g" >> script_${ExeNameOut}.ksh |
---|
| 2079 | echo "export KMP_LIBRARY=turnaround" >> script_${ExeNameOut}.ksh |
---|
| 2080 | echo "export MKL_SERIAL=YES" >> script_${ExeNameOut}.ksh |
---|
| 2081 | echo "./${ExeNameOut} > out_${ExeNameOut}.out 2>out_${ExeNameOut}.err" >> script_${ExeNameOut}.ksh |
---|
| 2082 | IGCM_sys_Chmod u+x script_${ExeNameOut}.ksh |
---|
[623] | 2083 | |
---|
[621] | 2084 | init_node=n |
---|
[623] | 2085 | |
---|
[621] | 2086 | (( nombre_restant_node = NUM_COREPERNODE - 1 )) |
---|
| 2087 | node_num_current=0 |
---|
| 2088 | node_current=${host[${node_num_current}]} |
---|
[623] | 2089 | |
---|
| 2090 | EXECUTION="${EXECUTION} -H ${node_current} -np 1 ./script_${ExeNameOut}.ksh" |
---|
| 2091 | |
---|
[621] | 2092 | init_exec=y |
---|
| 2093 | start_num=1 |
---|
[623] | 2094 | |
---|
[621] | 2095 | fi |
---|
[623] | 2096 | |
---|
[621] | 2097 | done |
---|
[623] | 2098 | |
---|
[621] | 2099 | # Then loop on the components (except for oasis) |
---|
| 2100 | |
---|
| 2101 | for comp in ${config_ListOfComponents[*]} ; do |
---|
[623] | 2102 | |
---|
[621] | 2103 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 2104 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
[623] | 2105 | |
---|
[621] | 2106 | # Only if we really have an executable for the component : |
---|
| 2107 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${comp}" != "XCPL" ] ) ; then |
---|
| 2108 | |
---|
| 2109 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
| 2110 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
[623] | 2111 | |
---|
[621] | 2112 | echo "#!/bin/ksh" > script_${ExeNameOut}.ksh |
---|
| 2113 | # echo "set -vx" >> script_${ExeNameOut}.ksh |
---|
| 2114 | echo "" >> script_${ExeNameOut}.ksh |
---|
| 2115 | echo "export KMP_STACKSIZE=3g" >> script_${ExeNameOut}.ksh |
---|
| 2116 | echo "export KMP_LIBRARY=turnaround" >> script_${ExeNameOut}.ksh |
---|
| 2117 | echo "export MKL_SERIAL=YES" >> script_${ExeNameOut}.ksh |
---|
[686] | 2118 | echo "export OMP_NUM_THREADS=${comp_proc_omp_loc}" >> script_${ExeNameOut}.ksh |
---|
[621] | 2119 | echo "(( MYMPIRANK = OMPI_COMM_WORLD_RANK - ${start_num})) " >> script_${ExeNameOut}.ksh |
---|
| 2120 | echo "./${ExeNameOut} > out_${ExeNameOut}.out.\${MYMPIRANK} 2>out_${ExeNameOut}.err.\${MYMPIRANK}" >> script_${ExeNameOut}.ksh |
---|
| 2121 | IGCM_sys_Chmod u+x script_${ExeNameOut}.ksh |
---|
[623] | 2122 | |
---|
[621] | 2123 | node_num=0 |
---|
| 2124 | |
---|
[623] | 2125 | # We define the number of MPI process to be assigned for the component |
---|
| 2126 | |
---|
[621] | 2127 | nombre_restant_comp=${comp_proc_mpi_loc} |
---|
[623] | 2128 | |
---|
[621] | 2129 | # Loop on the allocated nodes |
---|
| 2130 | |
---|
| 2131 | for node in ${listnodes} ; do |
---|
| 2132 | |
---|
| 2133 | # We go to the current node |
---|
| 2134 | if [ ${node_num} = ${node_num_current} ] ; then |
---|
| 2135 | |
---|
[623] | 2136 | node_current=${host[${node_num_current}]} |
---|
[621] | 2137 | |
---|
[623] | 2138 | # If first time on the node : initialisation |
---|
[621] | 2139 | |
---|
| 2140 | if [ ${init_node} = y ] ; then |
---|
| 2141 | nombre_restant_node=${NUM_COREPERNODE} |
---|
[623] | 2142 | fi |
---|
| 2143 | |
---|
[621] | 2144 | # Test on the number of OMP threads |
---|
| 2145 | |
---|
[623] | 2146 | if [ ${comp_proc_omp_loc} -gt ${nombre_restant_node} ] ; then |
---|
[621] | 2147 | (( node_num = node_num + 1 )) |
---|
| 2148 | node_num_current=${node_num} |
---|
| 2149 | init_node=y |
---|
| 2150 | continue |
---|
| 2151 | fi |
---|
| 2152 | |
---|
| 2153 | # Number of MPI process to assign |
---|
| 2154 | |
---|
| 2155 | (( num_corempi = nombre_restant_node / comp_proc_omp_loc )) |
---|
[623] | 2156 | |
---|
| 2157 | if [ ${num_corempi} -gt ${nombre_restant_comp} ] ; then |
---|
[621] | 2158 | num_corempi=${nombre_restant_comp} |
---|
| 2159 | fi |
---|
| 2160 | |
---|
| 2161 | (( nombre_restant_node = nombre_restant_node - num_corempi * comp_proc_omp_loc )) |
---|
[623] | 2162 | (( nombre_restant_comp = nombre_restant_comp - num_corempi )) |
---|
| 2163 | |
---|
| 2164 | if [ ${init_exec} = y ] ; then |
---|
[621] | 2165 | EXECUTION="${EXECUTION} : -H ${node_current} -np ${num_corempi} ./script_${ExeNameOut}.ksh" |
---|
[623] | 2166 | else |
---|
[621] | 2167 | EXECUTION="${EXECUTION} -H ${node_current} -np ${num_corempi} ./script_${ExeNameOut}.ksh" |
---|
| 2168 | init_exec=y |
---|
| 2169 | fi |
---|
| 2170 | |
---|
| 2171 | (( start_num = num_corempi + start_num )) |
---|
[623] | 2172 | |
---|
[621] | 2173 | else |
---|
[623] | 2174 | |
---|
| 2175 | (( node_num = node_num + 1 )) |
---|
| 2176 | continue |
---|
[621] | 2177 | fi |
---|
[623] | 2178 | |
---|
| 2179 | # Test on the number of core/process remaining on the node/component |
---|
| 2180 | |
---|
[621] | 2181 | if [ ${nombre_restant_node} = 0 ] ; then |
---|
| 2182 | (( node_num = node_num + 1 )) |
---|
[623] | 2183 | node_num_current=${node_num} |
---|
| 2184 | init_node=y |
---|
[621] | 2185 | |
---|
| 2186 | if [ ${nombre_restant_comp} = 0 ] ; then |
---|
| 2187 | break 1 |
---|
| 2188 | fi |
---|
| 2189 | else |
---|
| 2190 | |
---|
| 2191 | node_num_current=${node_num} |
---|
[623] | 2192 | init_node=n |
---|
| 2193 | |
---|
| 2194 | if [ ${nombre_restant_comp} = 0 ] ; then |
---|
| 2195 | break 1 |
---|
| 2196 | fi |
---|
[621] | 2197 | fi |
---|
| 2198 | done |
---|
| 2199 | fi |
---|
| 2200 | done |
---|
[623] | 2201 | |
---|
[621] | 2202 | else |
---|
| 2203 | |
---|
| 2204 | # Then first loop on the components for the coupler ie oasis |
---|
| 2205 | |
---|
| 2206 | ## the coupler ie oasis must be the first one |
---|
[623] | 2207 | for comp in ${config_ListOfComponents[*]} ; do |
---|
[621] | 2208 | |
---|
[623] | 2209 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
| 2210 | |
---|
| 2211 | # for CPL component only |
---|
| 2212 | if [ "X${comp}" = "XCPL" ] ; then |
---|
| 2213 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
| 2214 | echo "-np ${comp_proc_mpi_loc} ./${ExeNameOut} " >> run_file |
---|
| 2215 | fi |
---|
| 2216 | done |
---|
| 2217 | |
---|
[621] | 2218 | # Then second loop on the components |
---|
| 2219 | |
---|
[623] | 2220 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 2221 | |
---|
| 2222 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
| 2223 | |
---|
[621] | 2224 | # Only if we really have an executable for the component and not the coupler ie oasis: |
---|
[623] | 2225 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${comp}" != "XCPL" ] ) ; then |
---|
| 2226 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
[629] | 2227 | echo "-np ${comp_proc_mpi_loc} ./${ExeNameOut}" >> run_file |
---|
[623] | 2228 | fi |
---|
| 2229 | done |
---|
| 2230 | IGCM_sys_Chmod u+x run_file |
---|
[621] | 2231 | |
---|
[623] | 2232 | EXECUTION="${HOST_MPIRUN_COMMAND} --app ./run_file" |
---|
| 2233 | |
---|
[621] | 2234 | fi |
---|
| 2235 | |
---|
[725] | 2236 | else # Only one executable. |
---|
[690] | 2237 | # Check has to be added with : |
---|
[687] | 2238 | # Job : |
---|
| 2239 | # #MSUB -n 8 # reservation des processeurs pour le job |
---|
| 2240 | # #MSUB -N 4 # reservation des nodes pour le job |
---|
| 2241 | # BATCH_NUM_PROC_TOT=32 |
---|
| 2242 | # |
---|
| 2243 | # config.card : |
---|
| 2244 | # ATM= (gcm.e, lmdz.x, 8MPI, 4OMP) |
---|
[690] | 2245 | # |
---|
| 2246 | # tested with : |
---|
| 2247 | # Job : |
---|
| 2248 | # #MSUB -n 32 |
---|
| 2249 | # BATCH_NUM_PROC_TOT=32 |
---|
| 2250 | # |
---|
| 2251 | # config.card : |
---|
| 2252 | # ATM= (gcm.e, lmdz.x) |
---|
[621] | 2253 | |
---|
[690] | 2254 | |
---|
[621] | 2255 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 2256 | |
---|
| 2257 | # Only if we really have an executable for the component : |
---|
[623] | 2258 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
[664] | 2259 | ### if ( [ "X${ExeNameOut}" != X\"\" ] ) ; then |
---|
[662] | 2260 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${ExeNameOut}" != "Xinca.dat" ] ) ; then |
---|
[623] | 2261 | |
---|
[687] | 2262 | IGCM_OMP=1 |
---|
| 2263 | |
---|
[623] | 2264 | if ( ${OK_PARA_OMP} ) ; then |
---|
| 2265 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
[686] | 2266 | export OMP_NUM_THREADS=${comp_proc_omp_loc} |
---|
[687] | 2267 | IGCMG_OMP=${comp_proc_omp_loc} |
---|
[623] | 2268 | fi |
---|
| 2269 | if ( ${OK_PARA_MPI} ) ; then |
---|
[686] | 2270 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
[621] | 2271 | # Default : mpirun used if nb_proc gt 1 |
---|
[686] | 2272 | # pour sortie out/err par process ? more test required |
---|
[623] | 2273 | # echo "./${ExeNameOut} > out_${ExeNameOut}.out.\${OMPI_COMM_WORLD_RANK} 2>out_${ExeNameOut}.err.\${OMPI_COMM_WORLD_RANK}" >> script_${ExeNameOut}.ksh |
---|
[686] | 2274 | EXECUTION="${HOST_MPIRUN_COMMAND} -np ${comp_proc_mpi_loc} ./${ExeNameOut}" |
---|
[623] | 2275 | else |
---|
[687] | 2276 | # Check if BATCH_NUM_PROC_TOT = IGCMG_OMP |
---|
| 2277 | if ( [ ${IGCM_OMP} -ne ${BATCH_NUM_PROC_TOT} ] ) ; then |
---|
| 2278 | IGCM_debug_Print 1 "sys Titane : BATCH_NUM_PROC_TOT <> ${comp}_PROC_OMP : ${BATCH_NUM_PROC_TOT} <> ${BRIDGE_MSUB_NPROC} " |
---|
| 2279 | IGCM_debug_Print 1 "sys Titane : Check #MSUB -n xx into Job" |
---|
| 2280 | IGCM_debug_Exit "IGCM_sys_build_execution_scripts" |
---|
| 2281 | fi |
---|
[623] | 2282 | # Default : mpirun is NOT used if nb_proc eq 1 |
---|
[686] | 2283 | # pour sortie out/err par process ? more test required |
---|
[623] | 2284 | # echo "./${ExeNameOut} > out_${ExeNameOut}.out 2>out_${ExeNameOut}.err" >> script_${ExeNameOut}.ksh |
---|
[687] | 2285 | EXECUTION="/usr/bin/time ./${ExeNameOut}" |
---|
[623] | 2286 | fi |
---|
| 2287 | fi |
---|
[621] | 2288 | done |
---|
[623] | 2289 | |
---|
[544] | 2290 | fi |
---|
[621] | 2291 | |
---|
| 2292 | IGCM_debug_Print 1 "sys Titane : La commande d execution est " |
---|
[686] | 2293 | IGCM_debug_Print 1 "$EXECUTION" |
---|
[621] | 2294 | |
---|
| 2295 | IGCM_debug_PopStack "IGCM_sys_build_execution_scripts" |
---|
[222] | 2296 | } |
---|
[451] | 2297 | |
---|
[651] | 2298 | ############################################################ |
---|
| 2299 | # Check of space available on temporary filesytems |
---|
| 2300 | function IGCM_sys_check_quota { |
---|
| 2301 | IGCM_debug_PushStack "IGCM_sys_check_quota" |
---|
| 2302 | if ( $DEBUG_sys ) ; then |
---|
| 2303 | echo "IGCM_sys_check_quota " |
---|
| 2304 | fi |
---|
| 2305 | # Limit of quota (in %) |
---|
| 2306 | limit_quota=90 |
---|
| 2307 | |
---|
| 2308 | # Check of the volume |
---|
| 2309 | volume_quota=$(ccc_quota | grep ' scratch' | awk '{print $2}') |
---|
| 2310 | volume_avail=$(ccc_quota | grep ' scratch' | awk '{print $3}') |
---|
| 2311 | |
---|
| 2312 | if ( [ ! X${volume_quota} = X ] && [ ! ${volume_quota} = "-" ] ) ; then |
---|
| 2313 | |
---|
| 2314 | unit_avail=${volume_avail: -1} |
---|
| 2315 | unit_quota=${volume_quota: -1} |
---|
| 2316 | |
---|
[696] | 2317 | if [ "${unit_quota}" = "*" ] ; then |
---|
[725] | 2318 | IGCM_debug_Print 1 "Please, check your quota of volume on scratch" |
---|
| 2319 | IGCM_debug_Print 1 "More than 100% of your quota is used" |
---|
| 2320 | IGCM_debug_Print 1 "Use the ccc_quota command to check" |
---|
| 2321 | IGCM_debug_Print 1 "You must have more than 10% available to run" |
---|
| 2322 | IGCM_debug_Exit "Not enough space to run ! STOP HERE" |
---|
| 2323 | IGCM_debug_Verif_Exit |
---|
[696] | 2324 | fi |
---|
| 2325 | |
---|
[651] | 2326 | temp_avail=${volume_avail%%${volume_avail: -1}*} |
---|
| 2327 | temp_quota=${volume_quota%%${volume_quota: -1}*} |
---|
| 2328 | |
---|
| 2329 | if [ ! ${unit_avail} = ${unit_quota} ] ; then |
---|
| 2330 | |
---|
| 2331 | # Convertion |
---|
| 2332 | if [ ${volume_avail: -1} = "T" ] ; then |
---|
| 2333 | (( temp_avail = temp_avail * 1000000000000 )) |
---|
| 2334 | elif [ ${volume_avail: -1} = "G" ] ; then |
---|
| 2335 | (( temp_avail = temp_avail * 1000000000 )) |
---|
| 2336 | elif [ ${volume_avail: -1} = "M" ] ; then |
---|
| 2337 | (( temp_avail = temp_avail * 1000000 )) |
---|
| 2338 | elif [ ${volume_avail: -1} = "k" ] ; then |
---|
| 2339 | (( temp_avail = temp_avail * 1000 )) |
---|
| 2340 | else |
---|
| 2341 | (( temp_avail = volume_avail )) |
---|
| 2342 | fi |
---|
| 2343 | if [ ${volume_quota: -1} = "T" ] ; then |
---|
| 2344 | (( temp_quota = temp_quota * 1000000000000 )) |
---|
| 2345 | elif [ ${volume_quota: -1} = "G" ] ; then |
---|
| 2346 | (( temp_quota = temp_quota * 1000000000 )) |
---|
| 2347 | elif [ ${volume_quota: -1} = "M" ] ; then |
---|
| 2348 | (( temp_quota = temp_quota * 1000000 )) |
---|
| 2349 | elif [ ${volume_quota: -1} = "k" ] ; then |
---|
| 2350 | (( temp_quota = temp_quota * 1000 )) |
---|
| 2351 | else |
---|
| 2352 | (( temp_quota = volume_quota )) |
---|
| 2353 | fi |
---|
| 2354 | fi |
---|
| 2355 | |
---|
| 2356 | quota_volume=$(echo "scale=2 ; $temp_quota/$temp_avail*100" | bc) |
---|
| 2357 | # echo "volume ratio is " $quota_volume |
---|
| 2358 | |
---|
| 2359 | if [ ${quota_volume} -ge ${limit_quota} ] ; then |
---|
| 2360 | IGCM_debug_Print 1 "Please, check your quota of volume on scratch" |
---|
[654] | 2361 | IGCM_debug_Print 1 "${quota_volume}% of your quota is used" |
---|
| 2362 | IGCM_debug_Print 1 "Use the ccc_quota command to check" |
---|
[651] | 2363 | IGCM_debug_Print 1 "You must have more than 10% available to run" |
---|
| 2364 | IGCM_debug_Exit "Not enough space to run ! STOP HERE" |
---|
| 2365 | IGCM_debug_Verif_Exit |
---|
| 2366 | fi |
---|
| 2367 | |
---|
| 2368 | fi |
---|
| 2369 | |
---|
| 2370 | # Check of the number of inodes |
---|
| 2371 | |
---|
| 2372 | inode_quota=$(ccc_quota | grep ' scratch' | awk '{print $6}') |
---|
| 2373 | inode_avail=$(ccc_quota | grep ' scratch' | awk '{print $7}') |
---|
| 2374 | |
---|
| 2375 | if ( [ ! X${inode_quota} = X ] && [ ! ${inode_quota} = "-" ] ) ; then |
---|
| 2376 | |
---|
| 2377 | unit_avail=${inode_avail: -1} |
---|
| 2378 | unit_quota=${inode_quota: -1} |
---|
| 2379 | |
---|
[696] | 2380 | if [ "${unit_quota}" = "*" ] ; then |
---|
[725] | 2381 | IGCM_debug_Print 1 "Please, check your quota of inode on scratch" |
---|
| 2382 | IGCM_debug_Print 1 "More than 100% of your quota is used" |
---|
| 2383 | IGCM_debug_Print 1 "Use the ccc_quota command to check" |
---|
| 2384 | IGCM_debug_Print 1 "You must have more than 10% available to run" |
---|
| 2385 | IGCM_debug_Exit "Not enough space to run ! STOP HERE" |
---|
| 2386 | IGCM_debug_Verif_Exit |
---|
[696] | 2387 | fi |
---|
| 2388 | |
---|
[651] | 2389 | temp_avail=${inode_avail%%${inode_avail: -1}*} |
---|
| 2390 | temp_quota=${inode_quota%%${inode_quota: -1}*} |
---|
| 2391 | |
---|
| 2392 | if [ ! ${unit_avail} = ${unit_quota} ] ; then |
---|
| 2393 | |
---|
| 2394 | # Convertion |
---|
| 2395 | if [ ${inode_avail: -1} = "T" ] ; then |
---|
| 2396 | (( temp_avail = temp_avail * 1000000000000 )) |
---|
| 2397 | elif [ ${inode_avail: -1} = "G" ] ; then |
---|
| 2398 | (( temp_avail = temp_avail * 1000000000 )) |
---|
| 2399 | elif [ ${inode_avail: -1} = "M" ] ; then |
---|
| 2400 | (( temp_avail = temp_avail * 1000000 )) |
---|
| 2401 | elif [ ${inode_avail: -1} = "k" ] ; then |
---|
| 2402 | (( temp_avail = temp_avail * 1000 )) |
---|
| 2403 | else |
---|
| 2404 | (( temp_avail = inode_avail )) |
---|
| 2405 | fi |
---|
| 2406 | |
---|
| 2407 | if [ ${inode_quota: -1} = "T" ] ; then |
---|
| 2408 | (( temp_quota = temp_quota * 1000000000000 )) |
---|
| 2409 | elif [ ${inode_quota: -1} = "G" ] ; then |
---|
| 2410 | (( temp_quota = temp_quota * 1000000000 )) |
---|
| 2411 | elif [ ${inode_quota: -1} = "M" ] ; then |
---|
| 2412 | (( temp_quota = temp_quota * 1000000 )) |
---|
| 2413 | elif [ ${inode_quota: -1} = "k" ] ; then |
---|
| 2414 | (( temp_quota = temp_quota * 1000 )) |
---|
| 2415 | else |
---|
| 2416 | (( temp_quota = inode_quota )) |
---|
| 2417 | fi |
---|
| 2418 | fi |
---|
| 2419 | quota_inode=$(echo "scale=2 ; $temp_quota/$temp_avail*100" | bc) |
---|
| 2420 | # echo "inode ratio is " $quota_inode |
---|
| 2421 | |
---|
| 2422 | if [ ${quota_inode} -ge ${limit_quota} ] ; then |
---|
| 2423 | IGCM_debug_Print 1 "Please, check your quota of inode on scratch" |
---|
[654] | 2424 | IGCM_debug_Print 1 "${quota_inode}% of your quota is used" |
---|
| 2425 | IGCM_debug_Print 1 "Use the ccc_quota command to check" |
---|
[651] | 2426 | IGCM_debug_Print 1 "You must have more than 10% available to run" |
---|
| 2427 | IGCM_debug_Exit "Not enough space to run ! STOP HERE" |
---|
| 2428 | IGCM_debug_Verif_Exit |
---|
| 2429 | fi |
---|
| 2430 | |
---|
| 2431 | fi |
---|
| 2432 | IGCM_debug_PopStack "IGCM_sys_check_quota" |
---|
| 2433 | } |
---|
| 2434 | |
---|
[451] | 2435 | ############################################################## |
---|
| 2436 | # NCO OPERATOR |
---|
| 2437 | |
---|
[544] | 2438 | function IGCM_sys_ncap2 { |
---|
| 2439 | IGCM_debug_PushStack "IGCM_sys_ncap2" -- $@ |
---|
| 2440 | if ( $DEBUG_sys ) ; then |
---|
| 2441 | echo "IGCM_sys_ncap2 :" $@ |
---|
| 2442 | fi |
---|
[714] | 2443 | |
---|
| 2444 | typeset NB_ESSAI DELAI status i |
---|
| 2445 | # number of tentative |
---|
| 2446 | NB_ESSAI=3 |
---|
| 2447 | # time delay between tentative |
---|
| 2448 | DELAI=2 |
---|
| 2449 | |
---|
| 2450 | i=0 |
---|
| 2451 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2452 | ncap2 "$@" > out_rsync 2>&1 |
---|
| 2453 | status=$? |
---|
| 2454 | if [ ${status} -gt 0 ] ; then |
---|
| 2455 | IGCM_debug_Print 2 "IGCM_sys_ncap2 : error code ${status}" |
---|
| 2456 | cat out_rsync |
---|
| 2457 | \rm out_rsync |
---|
| 2458 | IGCM_debug_Print 2 "IGCM_sys_ncap2 : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2459 | sleep $DELAI |
---|
[714] | 2460 | else |
---|
| 2461 | \rm out_rsync |
---|
| 2462 | break |
---|
| 2463 | fi |
---|
| 2464 | (( i = i + 1 )) |
---|
| 2465 | done |
---|
| 2466 | |
---|
| 2467 | if [ ${status} -gt 0 ] ; then |
---|
| 2468 | echo "IGCM_sys_ncap2 : ncap2 error" |
---|
| 2469 | IGCM_debug_Exit "ncap2" |
---|
[544] | 2470 | fi |
---|
| 2471 | |
---|
| 2472 | IGCM_debug_PopStack "IGCM_sys_ncap2" |
---|
| 2473 | } |
---|
| 2474 | |
---|
[451] | 2475 | function IGCM_sys_ncatted { |
---|
[544] | 2476 | IGCM_debug_PushStack "IGCM_sys_ncatted" -- $@ |
---|
| 2477 | if ( $DEBUG_sys ) ; then |
---|
| 2478 | echo "IGCM_sys_ncatted :" $@ |
---|
| 2479 | fi |
---|
[714] | 2480 | |
---|
| 2481 | typeset NB_ESSAI DELAI status i |
---|
| 2482 | # number of tentative |
---|
| 2483 | NB_ESSAI=3 |
---|
| 2484 | # time delay between tentative |
---|
| 2485 | DELAI=2 |
---|
| 2486 | |
---|
| 2487 | i=0 |
---|
| 2488 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2489 | ncatted "$@" > out_rsync 2>&1 |
---|
| 2490 | status=$? |
---|
| 2491 | if [ ${status} -gt 0 ] ; then |
---|
| 2492 | IGCM_debug_Print 2 "IGCM_sys_ncatted : error code ${status}" |
---|
| 2493 | cat out_rsync |
---|
| 2494 | \rm out_rsync |
---|
| 2495 | IGCM_debug_Print 2 "IGCM_sys_ncatted : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2496 | sleep $DELAI |
---|
[714] | 2497 | else |
---|
| 2498 | \rm out_rsync |
---|
| 2499 | break |
---|
| 2500 | fi |
---|
| 2501 | (( i = i + 1 )) |
---|
| 2502 | done |
---|
| 2503 | |
---|
| 2504 | if [ ${status} -gt 0 ] ; then |
---|
| 2505 | echo "IGCM_sys_ncatted : ncatted error" |
---|
| 2506 | IGCM_debug_Exit "ncatted" |
---|
[544] | 2507 | fi |
---|
[451] | 2508 | |
---|
[544] | 2509 | IGCM_debug_PopStack "IGCM_sys_ncatted" |
---|
[451] | 2510 | } |
---|
| 2511 | |
---|
| 2512 | function IGCM_sys_ncbo { |
---|
[544] | 2513 | IGCM_debug_PushStack "IGCM_sys_ncbo" -- $@ |
---|
| 2514 | if ( $DEBUG_sys ) ; then |
---|
| 2515 | echo "IGCM_sys_ncbo :" $@ |
---|
| 2516 | fi |
---|
[714] | 2517 | |
---|
| 2518 | typeset NB_ESSAI DELAI status i |
---|
| 2519 | # number of tentative |
---|
| 2520 | NB_ESSAI=3 |
---|
| 2521 | # time delay between tentative |
---|
| 2522 | DELAI=2 |
---|
| 2523 | |
---|
| 2524 | i=0 |
---|
| 2525 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2526 | ncbo $@ > out_rsync 2>&1 |
---|
| 2527 | status=$? |
---|
| 2528 | if [ ${status} -gt 0 ] ; then |
---|
| 2529 | IGCM_debug_Print 2 "IGCM_sys_ncbo : error code ${status}" |
---|
| 2530 | cat out_rsync |
---|
| 2531 | \rm out_rsync |
---|
| 2532 | IGCM_debug_Print 2 "IGCM_sys_ncbo : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2533 | sleep $DELAI |
---|
[714] | 2534 | else |
---|
| 2535 | \rm out_rsync |
---|
| 2536 | break |
---|
| 2537 | fi |
---|
| 2538 | (( i = i + 1 )) |
---|
| 2539 | done |
---|
| 2540 | |
---|
| 2541 | if [ ${status} -gt 0 ] ; then |
---|
| 2542 | echo "IGCM_sys_ncbo : ncbo error" |
---|
| 2543 | IGCM_debug_Exit "ncbo" |
---|
[544] | 2544 | fi |
---|
[451] | 2545 | |
---|
[544] | 2546 | IGCM_debug_PopStack "IGCM_sys_ncbo" |
---|
[451] | 2547 | } |
---|
| 2548 | |
---|
| 2549 | function IGCM_sys_ncdiff { |
---|
[544] | 2550 | IGCM_debug_PushStack "IGCM_sys_ncdiff" -- $@ |
---|
| 2551 | if ( $DEBUG_sys ) ; then |
---|
| 2552 | echo "IGCM_sys_ncdiff :" $@ |
---|
| 2553 | fi |
---|
[714] | 2554 | |
---|
| 2555 | typeset NB_ESSAI DELAI status i |
---|
| 2556 | # number of tentative |
---|
| 2557 | NB_ESSAI=3 |
---|
| 2558 | # time delay between tentative |
---|
| 2559 | DELAI=2 |
---|
| 2560 | |
---|
| 2561 | i=0 |
---|
| 2562 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2563 | ncdiff $@ > out_rsync 2>&1 |
---|
| 2564 | status=$? |
---|
| 2565 | if [ ${status} -gt 0 ] ; then |
---|
| 2566 | IGCM_debug_Print 2 "IGCM_sys_ncdiff : error code ${status}" |
---|
| 2567 | cat out_rsync |
---|
| 2568 | \rm out_rsync |
---|
| 2569 | IGCM_debug_Print 2 "IGCM_sys_ncdiff : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2570 | sleep $DELAI |
---|
[714] | 2571 | else |
---|
| 2572 | \rm out_rsync |
---|
| 2573 | break |
---|
| 2574 | fi |
---|
| 2575 | (( i = i + 1 )) |
---|
| 2576 | done |
---|
| 2577 | |
---|
| 2578 | if [ ${status} -gt 0 ] ; then |
---|
| 2579 | echo "IGCM_sys_ncdiff : ncdiff error" |
---|
| 2580 | IGCM_debug_Exit "ncdiff" |
---|
[544] | 2581 | fi |
---|
[451] | 2582 | |
---|
[544] | 2583 | IGCM_debug_PopStack "IGCM_sys_ncdiff" |
---|
[451] | 2584 | } |
---|
| 2585 | |
---|
| 2586 | function IGCM_sys_ncea { |
---|
[544] | 2587 | IGCM_debug_PushStack "IGCM_sys_ncea" -- $@ |
---|
| 2588 | if ( $DEBUG_sys ) ; then |
---|
| 2589 | echo "IGCM_sys_ncea :" $@ |
---|
| 2590 | fi |
---|
[714] | 2591 | |
---|
| 2592 | typeset NB_ESSAI DELAI status i |
---|
| 2593 | # number of tentative |
---|
| 2594 | NB_ESSAI=3 |
---|
| 2595 | # time delay between tentative |
---|
| 2596 | DELAI=2 |
---|
| 2597 | |
---|
| 2598 | i=0 |
---|
| 2599 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2600 | ncea $@ > out_rsync 2>&1 |
---|
| 2601 | status=$? |
---|
| 2602 | if [ ${status} -gt 0 ] ; then |
---|
| 2603 | IGCM_debug_Print 2 "IGCM_sys_ncea : error code ${status}" |
---|
| 2604 | cat out_rsync |
---|
| 2605 | \rm out_rsync |
---|
| 2606 | IGCM_debug_Print 2 "IGCM_sys_ncea : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2607 | sleep $DELAI |
---|
[714] | 2608 | else |
---|
| 2609 | \rm out_rsync |
---|
| 2610 | break |
---|
| 2611 | fi |
---|
| 2612 | (( i = i + 1 )) |
---|
| 2613 | done |
---|
| 2614 | |
---|
| 2615 | if [ ${status} -gt 0 ] ; then |
---|
| 2616 | echo "IGCM_sys_ncea : ncea error" |
---|
| 2617 | IGCM_debug_Exit "ncea" |
---|
[544] | 2618 | fi |
---|
[451] | 2619 | |
---|
[544] | 2620 | IGCM_debug_PopStack "IGCM_sys_ncea" |
---|
[451] | 2621 | } |
---|
| 2622 | |
---|
| 2623 | function IGCM_sys_ncecat { |
---|
[544] | 2624 | IGCM_debug_PushStack "IGCM_sys_ncecat" -- $@ |
---|
| 2625 | if ( $DEBUG_sys ) ; then |
---|
| 2626 | echo "IGCM_sys_ncecat :" $@ |
---|
| 2627 | fi |
---|
[714] | 2628 | |
---|
| 2629 | typeset NB_ESSAI DELAI status i |
---|
| 2630 | # number of tentative |
---|
| 2631 | NB_ESSAI=3 |
---|
| 2632 | # time delay between tentative |
---|
| 2633 | DELAI=2 |
---|
| 2634 | |
---|
| 2635 | i=0 |
---|
| 2636 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2637 | ncecat $@ > out_rsync 2>&1 |
---|
| 2638 | status=$? |
---|
| 2639 | if [ ${status} -gt 0 ] ; then |
---|
| 2640 | IGCM_debug_Print 2 "IGCM_sys_ncecat : error code ${status}" |
---|
| 2641 | cat out_rsync |
---|
| 2642 | \rm out_rsync |
---|
| 2643 | IGCM_debug_Print 2 "IGCM_sys_ncecat : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2644 | sleep $DELAI |
---|
[714] | 2645 | else |
---|
| 2646 | \rm out_rsync |
---|
| 2647 | break |
---|
| 2648 | fi |
---|
| 2649 | (( i = i + 1 )) |
---|
| 2650 | done |
---|
| 2651 | |
---|
| 2652 | if [ ${status} -gt 0 ] ; then |
---|
| 2653 | echo "IGCM_sys_ncecat : ncecat error" |
---|
| 2654 | IGCM_debug_Exit "ncecat" |
---|
[544] | 2655 | fi |
---|
[451] | 2656 | |
---|
[544] | 2657 | IGCM_debug_PopStack "IGCM_sys_ncecat" |
---|
[451] | 2658 | } |
---|
| 2659 | |
---|
| 2660 | function IGCM_sys_ncflint { |
---|
[544] | 2661 | IGCM_debug_PushStack "IGCM_sys_ncflint" -- $@ |
---|
| 2662 | if ( $DEBUG_sys ) ; then |
---|
| 2663 | echo "IGCM_sys_ncflint :" $@ |
---|
| 2664 | fi |
---|
[714] | 2665 | |
---|
| 2666 | typeset NB_ESSAI DELAI status i |
---|
| 2667 | # number of tentative |
---|
| 2668 | NB_ESSAI=3 |
---|
| 2669 | # time delay between tentative |
---|
| 2670 | DELAI=2 |
---|
| 2671 | |
---|
| 2672 | i=0 |
---|
| 2673 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2674 | ncflint $@ > out_rsync 2>&1 |
---|
| 2675 | status=$? |
---|
| 2676 | if [ ${status} -gt 0 ] ; then |
---|
| 2677 | IGCM_debug_Print 2 "IGCM_sys_ncflint : error code ${status}" |
---|
| 2678 | cat out_rsync |
---|
| 2679 | \rm out_rsync |
---|
| 2680 | IGCM_debug_Print 2 "IGCM_sys_ncflint : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2681 | sleep $DELAI |
---|
[714] | 2682 | else |
---|
| 2683 | \rm out_rsync |
---|
| 2684 | break |
---|
| 2685 | fi |
---|
| 2686 | (( i = i + 1 )) |
---|
| 2687 | done |
---|
| 2688 | |
---|
| 2689 | if [ ${status} -gt 0 ] ; then |
---|
| 2690 | echo "IGCM_sys_ncflint : ncflint error" |
---|
| 2691 | IGCM_debug_Exit "ncflint" |
---|
[544] | 2692 | fi |
---|
[451] | 2693 | |
---|
[544] | 2694 | IGCM_debug_PopStack "IGCM_sys_ncflint" |
---|
[451] | 2695 | } |
---|
| 2696 | |
---|
| 2697 | function IGCM_sys_ncks { |
---|
[544] | 2698 | IGCM_debug_PushStack "IGCM_sys_ncks" -- $@ |
---|
| 2699 | if ( $DEBUG_sys ) ; then |
---|
| 2700 | echo "IGCM_sys_ncks :" $@ |
---|
| 2701 | fi |
---|
[714] | 2702 | |
---|
| 2703 | typeset NB_ESSAI DELAI status i |
---|
| 2704 | # number of tentative |
---|
| 2705 | NB_ESSAI=3 |
---|
| 2706 | # time delay between tentative |
---|
| 2707 | DELAI=2 |
---|
| 2708 | |
---|
| 2709 | i=0 |
---|
| 2710 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2711 | ncks $@ > out_rsync 2>&1 |
---|
| 2712 | status=$? |
---|
| 2713 | if [ ${status} -gt 0 ] ; then |
---|
| 2714 | IGCM_debug_Print 2 "IGCM_sys_ncks : error code ${status}" |
---|
| 2715 | cat out_rsync |
---|
| 2716 | \rm out_rsync |
---|
| 2717 | IGCM_debug_Print 2 "IGCM_sys_ncks : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2718 | sleep $DELAI |
---|
[714] | 2719 | else |
---|
| 2720 | \rm out_rsync |
---|
| 2721 | break |
---|
| 2722 | fi |
---|
| 2723 | (( i = i + 1 )) |
---|
| 2724 | done |
---|
| 2725 | |
---|
| 2726 | if [ ${status} -gt 0 ] ; then |
---|
| 2727 | echo "IGCM_sys_ncks : ncks error" |
---|
| 2728 | IGCM_debug_Exit "ncks" |
---|
[544] | 2729 | fi |
---|
[451] | 2730 | |
---|
[544] | 2731 | IGCM_debug_PopStack "IGCM_sys_ncks" |
---|
[451] | 2732 | } |
---|
| 2733 | |
---|
| 2734 | function IGCM_sys_ncpdq { |
---|
[544] | 2735 | IGCM_debug_PushStack "IGCM_sys_ncpdq" -- $@ |
---|
| 2736 | if ( $DEBUG_sys ) ; then |
---|
| 2737 | echo "IGCM_sys_ncpdq :" $@ |
---|
| 2738 | fi |
---|
[714] | 2739 | |
---|
| 2740 | typeset NB_ESSAI DELAI status i |
---|
| 2741 | # number of tentative |
---|
| 2742 | NB_ESSAI=3 |
---|
| 2743 | # time delay between tentative |
---|
| 2744 | DELAI=2 |
---|
| 2745 | |
---|
| 2746 | i=0 |
---|
| 2747 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2748 | ncpdq $@ > out_rsync 2>&1 |
---|
| 2749 | status=$? |
---|
| 2750 | if [ ${status} -gt 0 ] ; then |
---|
| 2751 | IGCM_debug_Print 2 "IGCM_sys_ncpdq : error code ${status}" |
---|
| 2752 | cat out_rsync |
---|
| 2753 | \rm out_rsync |
---|
| 2754 | IGCM_debug_Print 2 "IGCM_sys_ncpdq : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2755 | sleep $DELAI |
---|
[714] | 2756 | else |
---|
| 2757 | \rm out_rsync |
---|
| 2758 | break |
---|
| 2759 | fi |
---|
| 2760 | (( i = i + 1 )) |
---|
| 2761 | done |
---|
| 2762 | |
---|
| 2763 | if [ ${status} -gt 0 ] ; then |
---|
| 2764 | echo "IGCM_sys_ncpdq : ncpdq error" |
---|
| 2765 | IGCM_debug_Exit "ncpdq" |
---|
[544] | 2766 | fi |
---|
[451] | 2767 | |
---|
[544] | 2768 | IGCM_debug_PopStack "IGCM_sys_ncpdq" |
---|
[451] | 2769 | } |
---|
| 2770 | |
---|
| 2771 | function IGCM_sys_ncra { |
---|
[544] | 2772 | IGCM_debug_PushStack "IGCM_sys_ncra" -- $@ |
---|
| 2773 | if ( $DEBUG_sys ) ; then |
---|
| 2774 | echo "IGCM_sys_ncra :" $@ |
---|
| 2775 | fi |
---|
[714] | 2776 | |
---|
| 2777 | typeset NB_ESSAI DELAI status i |
---|
| 2778 | # number of tentative |
---|
| 2779 | NB_ESSAI=3 |
---|
| 2780 | # time delay between tentative |
---|
| 2781 | DELAI=2 |
---|
| 2782 | |
---|
| 2783 | i=0 |
---|
| 2784 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2785 | ncra $@ > out_rsync 2>&1 |
---|
| 2786 | status=$? |
---|
| 2787 | if [ ${status} -gt 0 ] ; then |
---|
| 2788 | IGCM_debug_Print 2 "IGCM_sys_ncra : error code ${status}" |
---|
| 2789 | cat out_rsync |
---|
| 2790 | \rm out_rsync |
---|
| 2791 | IGCM_debug_Print 2 "IGCM_sys_ncra : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2792 | sleep $DELAI |
---|
[714] | 2793 | else |
---|
| 2794 | \rm out_rsync |
---|
| 2795 | break |
---|
| 2796 | fi |
---|
| 2797 | (( i = i + 1 )) |
---|
| 2798 | done |
---|
| 2799 | |
---|
| 2800 | if [ ${status} -gt 0 ] ; then |
---|
| 2801 | echo "IGCM_sys_ncra : ncra error" |
---|
| 2802 | IGCM_debug_Exit "ncra" |
---|
[544] | 2803 | fi |
---|
[451] | 2804 | |
---|
[544] | 2805 | IGCM_debug_PopStack "IGCM_sys_ncra" |
---|
[451] | 2806 | } |
---|
| 2807 | |
---|
| 2808 | function IGCM_sys_ncrcat { |
---|
[544] | 2809 | IGCM_debug_PushStack "IGCM_sys_ncrcat" -- $@ |
---|
| 2810 | if ( $DEBUG_sys ) ; then |
---|
| 2811 | echo "IGCM_sys_ncrcat :" $@ |
---|
| 2812 | fi |
---|
[714] | 2813 | |
---|
| 2814 | typeset NB_ESSAI DELAI status i |
---|
| 2815 | # number of tentative |
---|
| 2816 | NB_ESSAI=3 |
---|
| 2817 | # time delay between tentative |
---|
| 2818 | DELAI=2 |
---|
| 2819 | |
---|
| 2820 | i=0 |
---|
| 2821 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2822 | ncrcat $@ > out_rsync 2>&1 |
---|
| 2823 | status=$? |
---|
| 2824 | if [ ${status} -gt 0 ] ; then |
---|
| 2825 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : error code ${status}" |
---|
| 2826 | cat out_rsync |
---|
| 2827 | \rm out_rsync |
---|
| 2828 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2829 | sleep $DELAI |
---|
[714] | 2830 | else |
---|
| 2831 | \rm out_rsync |
---|
| 2832 | break |
---|
| 2833 | fi |
---|
| 2834 | (( i = i + 1 )) |
---|
| 2835 | done |
---|
| 2836 | |
---|
| 2837 | if [ ${status} -gt 0 ] ; then |
---|
| 2838 | echo "IGCM_sys_ncrcat : ncrcat error" |
---|
| 2839 | #IGCM_debug_Exit "ncrcat" |
---|
[544] | 2840 | fi |
---|
[451] | 2841 | |
---|
[544] | 2842 | IGCM_debug_PopStack "IGCM_sys_ncrcat" |
---|
[451] | 2843 | } |
---|
| 2844 | |
---|
| 2845 | function IGCM_sys_ncrename { |
---|
[544] | 2846 | IGCM_debug_PushStack "IGCM_sys_ncrename" -- $@ |
---|
| 2847 | if ( $DEBUG_sys ) ; then |
---|
| 2848 | echo "IGCM_sys_ncrename :" $@ |
---|
| 2849 | fi |
---|
[714] | 2850 | |
---|
| 2851 | typeset NB_ESSAI DELAI status i |
---|
| 2852 | # number of tentative |
---|
| 2853 | NB_ESSAI=3 |
---|
| 2854 | # time delay between tentative |
---|
| 2855 | DELAI=2 |
---|
| 2856 | |
---|
| 2857 | i=0 |
---|
| 2858 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2859 | ncrename $@ > out_rsync 2>&1 |
---|
| 2860 | status=$? |
---|
| 2861 | if [ ${status} -gt 0 ] ; then |
---|
| 2862 | IGCM_debug_Print 2 "IGCM_sys_ncrename : error code ${status}" |
---|
| 2863 | cat out_rsync |
---|
| 2864 | \rm out_rsync |
---|
| 2865 | IGCM_debug_Print 2 "IGCM_sys_ncrename : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2866 | sleep $DELAI |
---|
[714] | 2867 | else |
---|
| 2868 | \rm out_rsync |
---|
| 2869 | break |
---|
| 2870 | fi |
---|
| 2871 | (( i = i + 1 )) |
---|
| 2872 | done |
---|
| 2873 | |
---|
| 2874 | if [ ${status} -gt 0 ] ; then |
---|
| 2875 | echo "IGCM_sys_ncrename : ncrename error" |
---|
| 2876 | IGCM_debug_Exit "ncrename" |
---|
[544] | 2877 | fi |
---|
[451] | 2878 | |
---|
[544] | 2879 | IGCM_debug_PopStack "IGCM_sys_ncrename" |
---|
[451] | 2880 | } |
---|
| 2881 | |
---|
| 2882 | function IGCM_sys_ncwa { |
---|
[544] | 2883 | IGCM_debug_PushStack "IGCM_sys_ncwa" -- $@ |
---|
| 2884 | if ( $DEBUG_sys ) ; then |
---|
| 2885 | echo "IGCM_sys_ncwa :" $@ |
---|
| 2886 | fi |
---|
[714] | 2887 | |
---|
| 2888 | typeset NB_ESSAI DELAI status i |
---|
| 2889 | # number of tentative |
---|
| 2890 | NB_ESSAI=3 |
---|
| 2891 | # time delay between tentative |
---|
| 2892 | DELAI=2 |
---|
| 2893 | |
---|
| 2894 | i=0 |
---|
| 2895 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2896 | ncwa $@ > out_rsync 2>&1 |
---|
| 2897 | status=$? |
---|
| 2898 | if [ ${status} -gt 0 ] ; then |
---|
| 2899 | IGCM_debug_Print 2 "IGCM_sys_ncwa : error code ${status}" |
---|
| 2900 | cat out_rsync |
---|
| 2901 | \rm out_rsync |
---|
| 2902 | IGCM_debug_Print 2 "IGCM_sys_ncwa : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[733] | 2903 | sleep $DELAI |
---|
[714] | 2904 | else |
---|
| 2905 | \rm out_rsync |
---|
| 2906 | break |
---|
| 2907 | fi |
---|
| 2908 | (( i = i + 1 )) |
---|
| 2909 | done |
---|
| 2910 | |
---|
| 2911 | if [ ${status} -gt 0 ] ; then |
---|
| 2912 | echo "IGCM_sys_ncwa : ncwa error" |
---|
| 2913 | IGCM_debug_Exit "ncwa" |
---|
[544] | 2914 | fi |
---|
[451] | 2915 | |
---|
[544] | 2916 | IGCM_debug_PopStack "IGCM_sys_ncwa" |
---|
[451] | 2917 | } |
---|
[544] | 2918 | |
---|
| 2919 | ############################################################## |
---|
| 2920 | # CDO OPERATOR |
---|
| 2921 | |
---|
| 2922 | function IGCM_sys_cdo { |
---|
| 2923 | IGCM_debug_PushStack "IGCM_sys_cdo" -- $@ |
---|
| 2924 | if ( $DEBUG_sys ) ; then |
---|
| 2925 | echo "IGCM_sys_cdo :" $@ |
---|
| 2926 | fi |
---|
[714] | 2927 | |
---|
| 2928 | typeset status |
---|
| 2929 | |
---|
| 2930 | \cdo $@ > out_rsync 2>&1 |
---|
| 2931 | status=$? |
---|
| 2932 | if [ ${status} -gt 0 ] ; then |
---|
| 2933 | echo "IGCM_sys_cdo : error code ${status}" |
---|
| 2934 | cat out_rsync |
---|
| 2935 | \rm out_rsync |
---|
[544] | 2936 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 2937 | return 1 |
---|
| 2938 | else |
---|
| 2939 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 2940 | return 0 |
---|
| 2941 | fi |
---|
| 2942 | |
---|
| 2943 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 2944 | } |
---|
[768] | 2945 | |
---|
| 2946 | #D-#================================================== |
---|
| 2947 | #D-function IGCM_sys_CountJobInQueue |
---|
| 2948 | #D-* Purpose: Check if job_name is currently |
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| 2949 | #D- running or in queue |
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| 2950 | #D-* Examples: IGCM_sys_CountJobInQueue ${JobName} NbRun |
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| 2951 | #D- |
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| 2952 | |
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| 2953 | function IGCM_sys_CountJobInQueue { |
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| 2954 | IGCM_debug_PushStack "IGCM_sys_CountJobInQueue" |
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| 2955 | if ( $DEBUG_sys ) ; then |
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| 2956 | echo "IGCM_sys_CountJobInQueue" |
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| 2957 | fi |
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| 2958 | |
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| 2959 | #NbRun=$( ccc_mstat -f | grep -c ${JobName} ) |
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| 2960 | |
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| 2961 | # With -f option, the full job name is given in the last column |
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| 2962 | NbRun=$( ccc_mstat -f | gawk -v JobName=$1 'BEGIN { x=0 } ($NF~String) { x=x+1 } END { print x }' ) |
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| 2963 | |
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| 2964 | eval ${2}=${NbRun} |
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| 2965 | |
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| 2966 | IGCM_debug_PopStack "IGCM_sys_CountJobInQueue" |
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| 2967 | } |
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| 2968 | |
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