[70] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | #************************************************************** |
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| 4 | # Author: Sébastien Denvil |
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[373] | 5 | # Contact: Sebastien.Denvil__at__ipsl.jussieu.fr |
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| 6 | # $Revision:: $ Revision of last commit |
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| 7 | # $Author:: $ Author of last commit |
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| 8 | # $Date:: $ Date of last commit |
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[70] | 9 | # IPSL (2006) |
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| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 11 | # |
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| 12 | #************************************************************** |
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| 13 | |
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| 14 | #========================================================= |
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| 15 | # The documentation of this file can be automatically generated |
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| 16 | # if you use the prefix #D- for comments to be extracted. |
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| 17 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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| 18 | #========================================================= |
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| 19 | |
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| 20 | #D-#================================================== |
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| 21 | #D-LibIGCM_sys for Vargas |
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| 22 | #D-#================================================== |
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| 23 | #D- |
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| 24 | #D- This ksh library if a layer under some usefull |
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| 25 | #D-environment variables and shell commands. |
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| 26 | #D-All those definitions depend on host particularities. |
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| 27 | #D-It manages a stack mechanism and test validity of operations. |
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| 28 | #D-All function described bellow must be prefixed by IGCM_sys. |
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| 29 | |
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| 30 | #==================================================== |
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| 31 | # libIGCM_sys PARAMETERS |
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| 32 | #==================================================== |
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| 33 | |
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| 34 | #==================================================== |
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| 35 | # set DEBUG_sys to true to output calls of function |
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| 36 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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| 37 | |
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| 38 | #==================================================== |
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| 39 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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| 40 | typeset -r DRYRUN=${DRYRUN:=0} |
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| 41 | |
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| 42 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 43 | # ------------------------------------------------------------------------------------- |
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| 44 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 45 | # | | Cp/Exe param files | | Chmod | | |
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| 46 | # | | Qsub | | | | |
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| 47 | # ------------------------------------------------------------------------------------- |
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| 48 | # | 0 | yes | yes | yes | yes | |
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| 49 | # ------------------------------------------------------------------------------------- |
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| 50 | # | 1 | yes | yes | yes | no | |
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| 51 | # ------------------------------------------------------------------------------------- |
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| 52 | # | 2 | yes | yes | no | no | |
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| 53 | # ------------------------------------------------------------------------------------- |
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| 54 | # | 3 | yes | no | no | no | |
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| 55 | # ------------------------------------------------------------------------------------- |
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| 56 | |
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| 57 | #===================================================== |
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| 58 | # Global Variables : |
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| 59 | #===================================================== |
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| 60 | # Language : "fr" or "en" |
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| 61 | typeset -r MYLANG="fr" |
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| 62 | |
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| 63 | #===================================================== |
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| 64 | # Host and user names |
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[217] | 65 | # $hostname ou hostname |
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[228] | 66 | typeset HOST=${HOST:=$( hostname )} |
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[70] | 67 | # $username ou whoami |
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[228] | 68 | typeset LOGIN=${LOGIN:=$( whoami )} |
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[70] | 69 | # $hostname of the MASTER job |
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[77] | 70 | typeset -r MASTER=vargas |
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[70] | 71 | |
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| 72 | #D- |
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| 73 | #D-#================================================== |
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| 74 | #D-Program used in libIGCM |
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| 75 | #D-#================================================== |
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| 76 | |
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| 77 | # rsync with path |
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| 78 | typeset -r RSYNC=/usr/local/bin/rsync |
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| 79 | # RSYNC_opt args to rsync |
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| 80 | typeset -r RSYNC_opt="-va" |
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[192] | 81 | # ie storage filesystem |
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[70] | 82 | typeset -r RHOST=gaya.idris.fr |
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| 83 | typeset -r REMOTE_RSYNC=/u/rech/ces/rces452/RSYNC/bin/rsync |
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| 84 | |
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| 85 | #==================================================== |
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| 86 | # Host specific DIRECTORIES |
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| 87 | #==================================================== |
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| 88 | |
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| 89 | #==================================================== |
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| 90 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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| 91 | typeset -r R_EXE="${MODIPSL}/bin" |
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| 92 | |
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| 93 | #==================================================== |
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| 94 | #- SUBMIT_DIR : submission dir |
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| 95 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${LOADL_STEP_INITDIR}} |
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| 96 | |
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| 97 | #==================================================== |
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| 98 | #- ARCHIVE |
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[132] | 99 | typeset -r ARCHIVE=$( echo ${HOME} | sed -e "s/homegpfs/u/" ) |
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[70] | 100 | |
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| 101 | #==================================================== |
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| 102 | #- Mirror libIGCM from vargas to ulam |
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| 103 | typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true} |
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| 104 | |
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| 105 | #==================================================== |
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| 106 | #- libIGCM_POST |
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[109] | 107 | PATHlibIGCM=$( echo ${libIGCM} | gawk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" ) |
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[132] | 108 | typeset -r HOME_POST=$( echo ${HOME} | sed -e "s/homegpfs/home/" ) |
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[192] | 109 | typeset -r libIGCM_POST=${HOME_POST}/MIRROR/${PATHlibIGCM}/libIGCM |
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[70] | 110 | |
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| 111 | #==================================================== |
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| 112 | #- IN |
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| 113 | typeset -r R_IN=${R_IN:=/u/rech/psl/rpsl035/IGCM} |
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[438] | 114 | typeset -r R_IN_ECMWF=${R_IN_ECMWF:=/u/rech/psl/rpsl376} |
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[70] | 115 | |
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| 116 | #==================================================== |
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| 117 | #- OUT |
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| 118 | typeset -r R_OUT=${ARCHIVE}/IGCM_OUT |
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| 119 | |
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| 120 | #==================================================== |
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| 121 | #- OUT_POST |
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[132] | 122 | typeset -r R_OUT_POST=$( echo ${HOME} | sed -e "s/homegpfs/workdir/" )/IGCM_OUT |
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[70] | 123 | |
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| 124 | #==================================================== |
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| 125 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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| 126 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${TMPDIR}} |
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| 127 | |
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| 128 | #==================================================== |
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[156] | 129 | #- BIG_DIR : BIG_DIR to store files waiting for rebuild |
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[423] | 130 | typeset -r BIG_DIR=${BIG_DIR:=${WORKDIR}/REBUILD} |
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[156] | 131 | |
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| 132 | #==================================================== |
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[70] | 133 | #- HOST_MPIRUN_COMMAND |
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| 134 | typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="time poe"} |
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| 135 | |
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| 136 | #==================================================== |
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| 137 | #- Max number of arguments passed to nco operator or demigration command |
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| 138 | UNIX_MAX_LIMIT=360 |
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| 139 | |
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| 140 | #D-#================================================== |
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| 141 | #D-function IGCM_sys_RshArchive |
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| 142 | #D-* Purpose: Archive rsh command |
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| 143 | #D-* Examples: |
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| 144 | #D- |
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| 145 | function IGCM_sys_RshArchive { |
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| 146 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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| 147 | rsh gaya exec /bin/ksh <<-EOF |
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| 148 | ${@} |
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| 149 | EOF |
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| 150 | if [ $? -gt 0 ] ; then |
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| 151 | echo "IGCM_sys_RshArchive : erreur." |
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| 152 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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| 153 | fi |
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| 154 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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| 155 | } |
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| 156 | |
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| 157 | #D-#================================================== |
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| 158 | #D-function IGCM_sys_RshPost |
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| 159 | #D-* Purpose: Post-process rsh command |
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| 160 | #D-* Examples: |
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| 161 | #D- |
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| 162 | function IGCM_sys_RshPost { |
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| 163 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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| 164 | if ( $DEBUG_sys ) ; then |
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| 165 | echo "IGCM_sys_RshPost :" $@ |
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| 166 | fi |
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| 167 | rsh ulam exec /bin/ksh ${@} |
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| 168 | if [ $? -gt 0 ] ; then |
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| 169 | echo "IGCM_sys_RshPost : erreur." |
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| 170 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 171 | fi |
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| 172 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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| 173 | } |
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| 174 | |
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| 175 | #D-#================================================== |
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[153] | 176 | #D-function IGCM_sys_SendMail |
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| 177 | #D-* Purpose: Send mail when simulation is over |
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| 178 | #D-* Examples: |
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| 179 | #D- |
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| 180 | function IGCM_sys_SendMail { |
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[409] | 181 | IGCM_debug_PushStack "IGCM_sys_SendMail" $@ |
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[153] | 182 | if ( $DEBUG_sys ) ; then |
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| 183 | echo "IGCM_sys_SendMail :" $@ |
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| 184 | fi |
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[437] | 185 | |
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| 186 | if ( ${ExitFlag} ) ; then |
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[453] | 187 | status=failed |
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[437] | 188 | else |
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[453] | 189 | status=completed |
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| 190 | fi |
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| 191 | cat << END_MAIL > job_end.mail |
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[437] | 192 | Dear ${LOGIN}, |
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| 193 | |
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[453] | 194 | Simulation ${config_UserChoices_JobName} is ${status} on supercomputer `hostname`. |
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[153] | 195 | Job started : ${DateBegin} |
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| 196 | Job ended : ${DateEnd} |
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[434] | 197 | Output files are available in ${R_SAVE} |
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[453] | 198 | Script files, Script Outputs and Debug files (if necessary) are available in ${SUBMIT_DIR} |
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[153] | 199 | END_MAIL |
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| 200 | |
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| 201 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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[437] | 202 | mailx -s "${config_UserChoices_JobName} ${status}" ${config_UserChoices_MailName} < job_end.mail |
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[153] | 203 | elif [ -f ~/.forward ] ; then |
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[437] | 204 | mailx -s "${config_UserChoices_JobName} ${status}" $( cat ~/.forward ) < job_end.mail |
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[266] | 205 | else |
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[437] | 206 | mailx -s "${config_UserChoices_JobName} ${status}" ${USER} < job_end.mail |
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[153] | 207 | fi |
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| 208 | |
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| 209 | if [ $? -gt 0 ] ; then |
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| 210 | echo "IGCM_sys_SendMail : erreur." |
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| 211 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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| 212 | fi |
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| 213 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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| 214 | } |
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| 215 | |
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| 216 | #D-#================================================== |
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[70] | 217 | #D-function IGCM_sys_Mkdir |
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| 218 | #D-* Purpose: Master locale mkdir command |
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| 219 | #D-* Examples: |
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| 220 | #D- |
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| 221 | function IGCM_sys_Mkdir { |
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| 222 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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| 223 | if ( $DEBUG_sys ) ; then |
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| 224 | echo "IGCM_sys_Mkdir :" $@ |
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| 225 | fi |
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| 226 | if [ ! -d ${1} ]; then |
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| 227 | \mkdir -p $1 |
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| 228 | if [ $? -gt 0 ] ; then |
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| 229 | echo "IGCM_sys_Mkdir : erreur." |
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| 230 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 231 | fi |
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| 232 | fi |
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| 233 | # vérification : |
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| 234 | if [ ! -d ${1} ] ; then |
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| 235 | echo "IGCM_sys_Mkdir : erreur." |
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| 236 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 237 | fi |
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| 238 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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| 239 | } |
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| 240 | |
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| 241 | #D-#================================================== |
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| 242 | #D-function IGCM_sys_MkdirArchive |
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| 243 | #D-* Purpose: Mkdir on Archive |
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| 244 | #D-* Examples: |
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| 245 | #D- |
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| 246 | function IGCM_sys_MkdirArchive { |
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| 247 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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| 248 | if ( $DEBUG_sys ) ; then |
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| 249 | echo "IGCM_sys_MkdirArchive :" $@ |
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| 250 | fi |
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| 251 | #- creation de repertoire sur le serveur fichier |
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| 252 | rsh gaya -n mkdir -p $1 |
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| 253 | |
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| 254 | if [ $? -gt 0 ] ; then |
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| 255 | echo "IGCM_sys_MkdirArchive : erreur." |
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| 256 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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| 257 | fi |
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| 258 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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| 259 | } |
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| 260 | |
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| 261 | #D-#================================================== |
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| 262 | #D-function IGCM_sys_MkdirWork |
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| 263 | #D-* Purpose: Mkdir on Work |
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| 264 | #D-* Examples: |
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| 265 | #D- |
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| 266 | function IGCM_sys_MkdirWork { |
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| 267 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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| 268 | if ( $DEBUG_sys ) ; then |
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| 269 | echo "IGCM_sys_MkdirWork :" $@ |
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| 270 | fi |
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| 271 | #- creation de repertoire sur le serveur fichier |
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| 272 | if [ ! -d ${1} ]; then |
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| 273 | \mkdir -p $1 |
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| 274 | if [ $? -gt 0 ] ; then |
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| 275 | echo "IGCM_sys_MkdirWork : erreur." |
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| 276 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
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| 277 | fi |
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| 278 | fi |
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| 279 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
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| 280 | } |
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| 281 | |
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| 282 | #D-#================================================== |
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| 283 | #D-function IGCM_sys_Cd |
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| 284 | #D-* Purpose: master cd command |
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| 285 | #D-* Examples: |
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| 286 | #D- |
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| 287 | function IGCM_sys_Cd { |
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| 288 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
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| 289 | if ( $DEBUG_sys ) ; then |
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| 290 | echo "IGCM_sys_Cd :" $@ |
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| 291 | fi |
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| 292 | \cd $1 |
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| 293 | if [ $? -gt 0 ] ; then |
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| 294 | echo "IGCM_sys_Cd : erreur." |
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| 295 | IGCM_debug_Exit "IGCM_sys_Cd" |
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| 296 | fi |
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| 297 | IGCM_debug_PopStack "IGCM_sys_Cd" |
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| 298 | } |
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| 299 | |
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| 300 | #D-#================================================== |
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| 301 | #D-function IGCM_sys_Chmod |
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| 302 | #D-* Purpose: Chmod |
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| 303 | #D-* Examples: |
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| 304 | #D- |
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| 305 | function IGCM_sys_Chmod { |
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| 306 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
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| 307 | if ( $DEBUG_sys ) ; then |
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| 308 | echo "IGCM_sys_Chmod :" $@ |
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| 309 | fi |
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| 310 | if [ $DRYRUN -le 1 ]; then |
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| 311 | \chmod $@ |
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| 312 | if [ $? -gt 0 ] ; then |
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| 313 | echo "IGCM_sys_Chmod : erreur." |
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| 314 | IGCM_debug_Exit "IGCM_sys_Chmod" |
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| 315 | fi |
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| 316 | else |
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| 317 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
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| 318 | fi |
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| 319 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
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| 320 | } |
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| 321 | |
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| 322 | #D-#================================================== |
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| 323 | #D-function IGCM_sys_FileSize |
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| 324 | #D-* Purpose: Filesize |
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| 325 | #D-* Examples: |
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| 326 | #D- |
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| 327 | function IGCM_sys_FileSize { |
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| 328 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
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| 329 | |
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| 330 | typeset sizeF |
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| 331 | set +A sizeF -- $( ls -la ${1} ) |
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| 332 | if [ $? -gt 0 ] ; then |
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| 333 | IGCM_debug_Exit "IGCM_sys_FileSize" |
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| 334 | fi |
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| 335 | eval ${2}=${sizeF[4]} |
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| 336 | |
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| 337 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
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| 338 | } |
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| 339 | |
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| 340 | #D-#================================================== |
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| 341 | #D-function IGCM_sys_TestDir |
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| 342 | #D-* Purpose: Test Directory that must exists |
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| 343 | #D-* Examples: |
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| 344 | #D- |
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| 345 | function IGCM_sys_TestDir { |
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| 346 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
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| 347 | if ( $DEBUG_sys ) ; then |
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| 348 | echo "IGCM_sys_TestDir :" $@ |
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| 349 | fi |
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| 350 | typeset ExistFlag |
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| 351 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
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| 352 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
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| 353 | |
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| 354 | return ${ExistFlag} |
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| 355 | } |
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| 356 | |
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| 357 | #D-#================================================== |
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| 358 | #D-function IGCM_sys_TestDirArchive |
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| 359 | #D-* Purpose: Test Directory that must exists on Archive |
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| 360 | #D-* Examples: |
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| 361 | #D- |
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| 362 | function IGCM_sys_TestDirArchive { |
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| 363 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
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| 364 | if ( $DEBUG_sys ) ; then |
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| 365 | echo "IGCM_sys_TestDirArchive :" $@ |
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| 366 | fi |
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| 367 | typeset ExistFlag |
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| 368 | ExistFlag=$( IGCM_sys_RshArchive "[ -d $1 ] && echo 0 || echo 1" ) |
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| 369 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
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| 370 | |
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| 371 | return ${ExistFlag} |
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| 372 | } |
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| 373 | |
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| 374 | #D-#================================================== |
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| 375 | #D-function IGCM_sys_TestFileArchive |
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| 376 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
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| 377 | #D-* Examples: |
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| 378 | #D- |
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| 379 | function IGCM_sys_TestFileArchive { |
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| 380 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
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| 381 | typeset ExistFlag |
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| 382 | ExistFlag=$( IGCM_sys_RshArchive "[ -f $1 ] && echo 0 || echo 1" ) |
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| 383 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
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| 384 | |
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| 385 | return ${ExistFlag} |
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| 386 | } |
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| 387 | |
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| 388 | #D-#================================================== |
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| 389 | #D-function IGCM_sys_CountFileArchive |
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| 390 | #D-* Purpose: Count files on Archive filesystem |
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| 391 | #D-* Examples: |
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| 392 | #D- |
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| 393 | function IGCM_sys_CountFileArchive { |
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| 394 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
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| 395 | IGCM_sys_RshArchive "ls ${@} 2>/dev/null | wc -l" |
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| 396 | if [ $? -gt 0 ] ; then |
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| 397 | echo "IGCM_sys_CountFileArchive : erreur." |
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| 398 | fi |
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| 399 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
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| 400 | } |
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| 401 | |
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| 402 | #D-#================================================== |
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| 403 | #D-function IGCM_sys_Tree |
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| 404 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
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| 405 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
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| 406 | #D- |
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| 407 | function IGCM_sys_Tree { |
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| 408 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
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| 409 | if ( $DEBUG_sys ) ; then |
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| 410 | echo "IGCM_sys_Tree :" $@ |
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| 411 | fi |
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| 412 | |
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| 413 | \mfls -r $@ |
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| 414 | |
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| 415 | IGCM_debug_PopStack "IGCM_sys_Tree" |
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| 416 | } |
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| 417 | |
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| 418 | #D-#================================================== |
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| 419 | #D-function IGCM_sys_Tar |
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| 420 | #D-* Purpose: master un-tar command |
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| 421 | #D-* Examples: |
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| 422 | #D- |
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| 423 | function IGCM_sys_Tar { |
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| 424 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
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| 425 | if ( $DEBUG_sys ) ; then |
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| 426 | echo "IGCM_sys_Tar :" $@ |
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| 427 | fi |
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[192] | 428 | \tar cvf $@ |
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[70] | 429 | if [ $? -gt 0 ] ; then |
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| 430 | echo "IGCM_sys_Tar : erreur." |
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| 431 | IGCM_debug_Exit "IGCM_sys_Tar" |
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| 432 | fi |
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[192] | 433 | \tar tvf $1 |
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| 434 | |
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[70] | 435 | IGCM_debug_PopStack "IGCM_sys_Tar" |
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| 436 | } |
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| 437 | |
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| 438 | #D-#================================================== |
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| 439 | #D-function IGCM_sys_UnTar |
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| 440 | #D-* Purpose: master un-tar command |
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| 441 | #D-* Examples: |
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| 442 | #D- |
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| 443 | function IGCM_sys_UnTar { |
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| 444 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
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| 445 | if ( $DEBUG_sys ) ; then |
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| 446 | echo "IGCM_sys_UnTar :" $@ |
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| 447 | fi |
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| 448 | \tar xvf $1 |
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| 449 | if [ $? -gt 0 ] ; then |
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| 450 | echo "IGCM_sys_UnTar : erreur." |
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| 451 | IGCM_debug_Exit "IGCM_sys_UnTar" |
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| 452 | fi |
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| 453 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
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| 454 | } |
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| 455 | |
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| 456 | #D-#================================================== |
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| 457 | #D-function IGCM_sys_Qsub |
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| 458 | #D-* Purpose: Qsub new job |
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| 459 | #D-* Examples: |
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| 460 | #D- |
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| 461 | function IGCM_sys_Qsub { |
---|
| 462 | IGCM_debug_PushStack "IGCM_sys_Qsub" $@ |
---|
| 463 | if ( $DEBUG_sys ) ; then |
---|
| 464 | echo "IGCM_sys_Qsub :" $@ |
---|
| 465 | fi |
---|
[92] | 466 | { |
---|
[93] | 467 | [ ${#@} = 1 ] && { cd $LOADL_STEP_INITDIR ; /usr/local/bin/llsubmit $1 ; ERROR=$? ; cd - ; } |
---|
| 468 | [ ${#@} = 2 ] && { cd $2 ; /usr/local/bin/llsubmit $1 ; ERROR=$? ; cd - ; } |
---|
[92] | 469 | } |
---|
[93] | 470 | if [ ${ERROR} -gt 0 ] ; then |
---|
[70] | 471 | echo "IGCM_sys_Qsub : erreur $@." |
---|
| 472 | IGCM_debug_Exit "IGCM_sys_Qsub" |
---|
| 473 | fi |
---|
| 474 | IGCM_debug_PopStack "IGCM_sys_Qsub" |
---|
| 475 | } |
---|
| 476 | |
---|
| 477 | #D-#================================================== |
---|
| 478 | #D-function IGCM_sys_QsubPost |
---|
| 479 | #D-* Purpose: Qsub new job on scalaire |
---|
| 480 | #D-* Examples: |
---|
| 481 | #D- |
---|
| 482 | function IGCM_sys_QsubPost { |
---|
| 483 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
| 484 | if ( $DEBUG_sys ) ; then |
---|
| 485 | echo "IGCM_sys_QsubPost :" $@ |
---|
| 486 | fi |
---|
| 487 | cd ${POST_DIR} |
---|
[93] | 488 | /opt/ibmll/LoadL/full/bin/llsubmit ${libIGCM_POST}/$1.job |
---|
[70] | 489 | cd - |
---|
| 490 | if [ $? -gt 0 ] ; then |
---|
| 491 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
| 492 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
| 493 | fi |
---|
| 494 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
| 495 | } |
---|
| 496 | |
---|
| 497 | #D-************************* |
---|
| 498 | #D- File transfer functions |
---|
| 499 | #D-************************* |
---|
| 500 | #D- |
---|
| 501 | |
---|
| 502 | #D-#================================================== |
---|
| 503 | #D-function IGCM_sys_Rsync_out |
---|
| 504 | #D-* Purpose: treat return val of rsync |
---|
| 505 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
| 506 | #D- Error values and explanations can depend on your system version. |
---|
| 507 | function IGCM_sys_Rsync_out { |
---|
| 508 | RET=$1 |
---|
| 509 | if [ ! $RET ] ; then |
---|
| 510 | echo "rsync error !" |
---|
| 511 | fi |
---|
| 512 | |
---|
| 513 | if [ $MYLANG = "fr" ]; then |
---|
| 514 | case $RET in |
---|
| 515 | 0) return ;; |
---|
| 516 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
| 517 | echo "Erreur de syntaxe ou d'utilisation." |
---|
| 518 | return;; |
---|
| 519 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
| 520 | echo "Incompatibilité de protocole." |
---|
| 521 | return;; |
---|
| 522 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
| 523 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
| 524 | echo "répertoires" |
---|
| 525 | return;; |
---|
| 526 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
| 527 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
| 528 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
| 529 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
| 530 | echo "pas par le serveur a été spécifiée." |
---|
| 531 | return;; |
---|
| 532 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
| 533 | echo "Erreur dans le socket d'entrée sortie" |
---|
| 534 | return;; |
---|
| 535 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
| 536 | echo "Erreur d'entrée sortie fichier" |
---|
| 537 | return;; |
---|
| 538 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
| 539 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
| 540 | return;; |
---|
| 541 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
| 542 | echo "Erreur avec les diagnostics du programme" |
---|
| 543 | return;; |
---|
| 544 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
| 545 | echo "Erreur dans le code IPC" |
---|
| 546 | return;; |
---|
| 547 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
| 548 | echo "SIGUSR1 ou SIGINT reçu" |
---|
| 549 | return;; |
---|
| 550 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
| 551 | echo "Une erreur retournée par waitpid()" |
---|
| 552 | return;; |
---|
| 553 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
| 554 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
| 555 | return;; |
---|
| 556 | 23) echo "" |
---|
| 557 | echo "Erreur fichier inexistant" |
---|
| 558 | return;; |
---|
| 559 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
| 560 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
| 561 | return;; |
---|
| 562 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $RET |
---|
| 563 | return;; |
---|
| 564 | esac |
---|
| 565 | elif [ $MYLANG = "en" ] ; then |
---|
| 566 | case $RET in |
---|
| 567 | 0) return;; |
---|
| 568 | 1) echo "rsync error : Syntax or usage error " |
---|
| 569 | return;; |
---|
| 570 | 2) echo "rsync error : Protocol incompatibility " |
---|
| 571 | return;; |
---|
| 572 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
| 573 | return;; |
---|
| 574 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
| 575 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
| 576 | echo "them; or an option was specified that is supported by the client and" |
---|
| 577 | echo "not by the server." |
---|
| 578 | return;; |
---|
| 579 | 5) echo "rsync error : Error starting client-server protocol" |
---|
| 580 | return;; |
---|
| 581 | 10) echo "rsync error : Error in socket I/O " |
---|
| 582 | return;; |
---|
| 583 | 11) echo "rsync error : Error in file I/O " |
---|
| 584 | return;; |
---|
| 585 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
| 586 | return;; |
---|
| 587 | 13) echo "rsync error : Errors with program diagnostics " |
---|
| 588 | return;; |
---|
| 589 | 14) echo "rsync error : Error in IPC code " |
---|
| 590 | return;; |
---|
| 591 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
| 592 | return;; |
---|
| 593 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
| 594 | return;; |
---|
| 595 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
| 596 | return;; |
---|
| 597 | 23) echo "rsync error : Partial transfer due to error" |
---|
| 598 | return;; |
---|
| 599 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
| 600 | return;; |
---|
| 601 | 30) echo "rsync error : Timeout in data send/receive " |
---|
| 602 | return;; |
---|
| 603 | *) echo "rsync error : return code of rsync unknown :" $RET |
---|
| 604 | return;; |
---|
| 605 | esac |
---|
| 606 | else |
---|
| 607 | echo "unknown language $MYLANG." |
---|
| 608 | return |
---|
| 609 | fi |
---|
| 610 | } |
---|
| 611 | |
---|
| 612 | |
---|
| 613 | #D-#================================================== |
---|
| 614 | #D-function IGCM_sys_Miror_libIGCM |
---|
| 615 | #D-* Purpose: Mirror libIGCM PATH and lib to ulam |
---|
| 616 | #D-* Examples: |
---|
| 617 | #D- |
---|
| 618 | function IGCM_sys_Mirror_libIGCM { |
---|
| 619 | IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM" |
---|
| 620 | if ( $DEBUG_sys ) ; then |
---|
| 621 | echo "IGCM_sys_Mirror_libIGCM" |
---|
| 622 | fi |
---|
| 623 | |
---|
| 624 | typeset RET |
---|
| 625 | |
---|
| 626 | IGCM_sys_RshPost <<-EOF |
---|
[193] | 627 | mkdir -p ${HOME_POST}/MIRROR/${PATHlibIGCM} |
---|
[70] | 628 | EOF |
---|
| 629 | rsh ulam -n hostname > /dev/null 2>&1 |
---|
| 630 | RET=$? |
---|
| 631 | if [ $RET -eq 0 ] ; then |
---|
[192] | 632 | echo ${RSYNC} ${RSYNC_opt} -e "rsh " ${libIGCM} ulam:${HOME_POST}/MIRROR/${PATHlibIGCM} > out_rsync 2>&1 |
---|
| 633 | ${RSYNC} ${RSYNC_opt} -e "rsh " ${libIGCM} ulam:${HOME_POST}/MIRROR/${PATHlibIGCM} >> out_rsync 2>&1 |
---|
[70] | 634 | RET=$? |
---|
| 635 | |
---|
| 636 | if [ ${RET} -gt 0 ] ; then |
---|
| 637 | echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on ulam." |
---|
| 638 | cat out_rsync |
---|
| 639 | fi |
---|
| 640 | else |
---|
| 641 | echo "No POST-TREATMENT avaible because ulam is down." |
---|
| 642 | fi |
---|
| 643 | IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM" |
---|
| 644 | } |
---|
| 645 | |
---|
| 646 | #==================================================== |
---|
| 647 | #- Call IGCM_sys_Mirror_libIGCM now ! |
---|
| 648 | if ( $MirrorlibIGCM ) ; then |
---|
| 649 | IGCM_sys_Mirror_libIGCM |
---|
| 650 | fi |
---|
| 651 | |
---|
| 652 | #D-#================================================== |
---|
| 653 | #D-function IGCM_sys_Cp |
---|
| 654 | #D-* Purpose: generic cp |
---|
| 655 | #D-* Examples: |
---|
| 656 | #D- |
---|
| 657 | function IGCM_sys_Cp { |
---|
| 658 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
| 659 | if ( $DEBUG_sys ) ; then |
---|
| 660 | echo "IGCM_sys_Cp :" $@ |
---|
| 661 | fi |
---|
| 662 | |
---|
| 663 | typeset RET |
---|
| 664 | |
---|
| 665 | echo cp $@ > out_rsync 2>&1 |
---|
| 666 | \cp $@ >> out_rsync 2>&1 |
---|
| 667 | RET=$? |
---|
| 668 | |
---|
| 669 | if [ ${RET} -gt 0 ] ; then |
---|
| 670 | echo "IGCM_sys_Cp : error." |
---|
| 671 | cat out_rsync |
---|
| 672 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
| 673 | fi |
---|
| 674 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
| 675 | } |
---|
| 676 | |
---|
| 677 | #D-#================================================== |
---|
[92] | 678 | #D-function IGCM_sys_Rm |
---|
| 679 | #D-* Purpose: generic rm |
---|
| 680 | #D-* Examples: |
---|
| 681 | #D- |
---|
| 682 | function IGCM_sys_Rm { |
---|
| 683 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
| 684 | if ( $DEBUG_sys ) ; then |
---|
[192] | 685 | echo "IGCM_sys_Rm :" $@ |
---|
[92] | 686 | fi |
---|
| 687 | |
---|
| 688 | typeset RET |
---|
| 689 | |
---|
| 690 | echo rm $@ > out_rsync 2>&1 |
---|
| 691 | \rm $@ >> out_rsync 2>&1 |
---|
| 692 | RET=$? |
---|
| 693 | |
---|
| 694 | if [ ${RET} -gt 0 ] ; then |
---|
[192] | 695 | echo "IGCM_sys_Rm : error." |
---|
| 696 | cat out_rsync |
---|
| 697 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
[92] | 698 | fi |
---|
| 699 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
| 700 | } |
---|
| 701 | |
---|
| 702 | #D-#================================================== |
---|
[203] | 703 | #D-function IGCM_sys_RmRunDir |
---|
| 704 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
| 705 | #D- scheduler will do the job) |
---|
| 706 | #D-* Examples: |
---|
| 707 | #D- |
---|
| 708 | function IGCM_sys_RmRunDir { |
---|
| 709 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
| 710 | if ( $DEBUG_sys ) ; then |
---|
| 711 | echo "IGCM_sys_RmRunDir :" $@ |
---|
| 712 | echo "Dummy call, let the scheduler do that." |
---|
| 713 | fi |
---|
| 714 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
| 715 | } |
---|
| 716 | |
---|
| 717 | #D-#================================================== |
---|
[70] | 718 | #D-function IGCM_sys_Mv |
---|
| 719 | #D-* Purpose: generic move |
---|
| 720 | #D-* Examples: |
---|
| 721 | #D- |
---|
| 722 | function IGCM_sys_Mv { |
---|
| 723 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
| 724 | if ( $DEBUG_sys ) ; then |
---|
| 725 | echo "IGCM_sys_Mv :" $@ |
---|
| 726 | fi |
---|
| 727 | |
---|
[173] | 728 | if [ $DRYRUN = 0 ]; then |
---|
[70] | 729 | |
---|
[173] | 730 | typeset RET |
---|
| 731 | |
---|
| 732 | echo mv $@ > out_rsync 2>&1 |
---|
| 733 | \mv $@ >> out_rsync 2>&1 |
---|
| 734 | RET=$? |
---|
| 735 | |
---|
| 736 | if [ ${RET} -gt 0 ] ; then |
---|
| 737 | echo "IGCM_sys_Mv : error in mv." |
---|
| 738 | cat out_rsync |
---|
| 739 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
| 740 | fi |
---|
| 741 | else |
---|
| 742 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
[70] | 743 | fi |
---|
| 744 | |
---|
| 745 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
| 746 | } |
---|
| 747 | |
---|
| 748 | #D-#================================================== |
---|
| 749 | #D-function IGCM_sys_Put_Dir |
---|
| 750 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
| 751 | #D-* Examples: |
---|
| 752 | #D- |
---|
| 753 | function IGCM_sys_Put_Dir { |
---|
| 754 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
| 755 | if ( $DEBUG_sys ) ; then |
---|
| 756 | echo "IGCM_sys_Put_Dir :" $@ |
---|
| 757 | fi |
---|
| 758 | if [ $DRYRUN = 0 ]; then |
---|
| 759 | if [ ! -d ${1} ] ; then |
---|
| 760 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
| 761 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 762 | return |
---|
| 763 | fi |
---|
| 764 | |
---|
| 765 | typeset RET |
---|
| 766 | |
---|
| 767 | # Only if we use rsync |
---|
| 768 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 769 | # |
---|
| 770 | #USUAL WAY |
---|
| 771 | rcp -r $1 gaya:$2 > out_rsync 2>&1 |
---|
| 772 | RET=$? |
---|
| 773 | |
---|
| 774 | if [ ${RET} -gt 0 ] ; then |
---|
| 775 | echo "IGCM_sys_Put_Dir : error." |
---|
| 776 | cat out_rsync |
---|
| 777 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
| 778 | fi |
---|
| 779 | else |
---|
| 780 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 781 | fi |
---|
| 782 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 783 | } |
---|
| 784 | |
---|
| 785 | #D-#================================================== |
---|
| 786 | #D-function IGCM_sys_Get_Dir |
---|
| 787 | #D-* Purpose: Copy a complete directory from $(ARCHIVE) |
---|
| 788 | #D-* Examples: |
---|
| 789 | #D- |
---|
| 790 | function IGCM_sys_Get_Dir { |
---|
| 791 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
| 792 | if ( $DEBUG_sys ) ; then |
---|
| 793 | echo "IGCM_sys_Get_Dir :" $@ |
---|
| 794 | fi |
---|
| 795 | if [ $DRYRUN = 0 ]; then |
---|
| 796 | if [ ! -d ${1} ] ; then |
---|
| 797 | echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
| 798 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 799 | return |
---|
| 800 | fi |
---|
| 801 | |
---|
| 802 | typeset RET |
---|
| 803 | |
---|
| 804 | #USUAL WAY |
---|
| 805 | rcp -rp gaya:$1 $2 > out_rsync 2>&1 |
---|
| 806 | RET=$? |
---|
| 807 | |
---|
| 808 | if [ ${RET} -gt 0 ] ; then |
---|
| 809 | echo "IGCM_sys_Get_Dir : error." |
---|
| 810 | cat out_rsync |
---|
| 811 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
| 812 | fi |
---|
| 813 | else |
---|
| 814 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 815 | fi |
---|
| 816 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 817 | } |
---|
| 818 | |
---|
| 819 | #D-#================================================== |
---|
| 820 | #D-function IGCM_sys_Put_Rest |
---|
| 821 | #D-* Purpose: Put computied restarts on $(ARCHIVE). |
---|
| 822 | #D- File and target directory must exist. |
---|
| 823 | #D-* Examples: |
---|
| 824 | #D- |
---|
| 825 | function IGCM_sys_Put_Rest { |
---|
| 826 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
| 827 | if ( $DEBUG_sys ) ; then |
---|
| 828 | echo "IGCM_sys_Put_Rest :" $@ |
---|
| 829 | fi |
---|
| 830 | if [ $DRYRUN = 0 ]; then |
---|
| 831 | if [ ! -f ${1} ] ; then |
---|
| 832 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
| 833 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
| 834 | fi |
---|
| 835 | |
---|
| 836 | typeset RET |
---|
| 837 | # |
---|
[128] | 838 | if [ X${JobType} = XRUN ] ; then |
---|
| 839 | IGCM_sys_Chmod 444 ${1} |
---|
| 840 | fi |
---|
[70] | 841 | # |
---|
| 842 | # Only if we use rsync |
---|
| 843 | #IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
| 844 | # |
---|
| 845 | #USUAL WAY |
---|
| 846 | mfput $1 $2 > out_rsync 2>&1 |
---|
| 847 | RET=$? |
---|
| 848 | |
---|
| 849 | # #RSYNC WITH NETWORK RSH CALL |
---|
[192] | 850 | # echo ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1 |
---|
| 851 | # ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1 |
---|
[70] | 852 | |
---|
| 853 | # #RSYNC WITH NFS USE |
---|
[192] | 854 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 855 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[70] | 856 | |
---|
| 857 | # RET=$? |
---|
| 858 | # IGCM_sys_Rsync_out $RET |
---|
| 859 | |
---|
| 860 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 861 | # (( RET=RET+$? )) |
---|
| 862 | |
---|
| 863 | if [ ${RET} -gt 0 ] ; then |
---|
| 864 | echo "IGCM_sys_Put_Rest : error." |
---|
| 865 | cat out_rsync |
---|
| 866 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
| 867 | fi |
---|
| 868 | else |
---|
| 869 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 870 | fi |
---|
| 871 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
| 872 | } |
---|
| 873 | |
---|
| 874 | #D-#================================================== |
---|
| 875 | #D-function IGCM_sys_Put_Out |
---|
| 876 | #D-* Purpose: Copy a file on $(ARCHIVE) after have chmod it in readonly |
---|
| 877 | #D-* Examples: |
---|
| 878 | #D- |
---|
| 879 | function IGCM_sys_Put_Out { |
---|
| 880 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
| 881 | if ( $DEBUG_sys ) ; then |
---|
| 882 | echo "IGCM_sys_Put_Out :" $@ |
---|
| 883 | fi |
---|
| 884 | if [ $DRYRUN = 0 ]; then |
---|
| 885 | if [ ! -f ${1} ] ; then |
---|
| 886 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
| 887 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 888 | return 1 |
---|
| 889 | fi |
---|
| 890 | |
---|
| 891 | typeset RET |
---|
| 892 | # |
---|
[128] | 893 | if [ X${JobType} = XRUN ] ; then |
---|
[228] | 894 | if [ X${3} = X ] ; then |
---|
| 895 | IGCM_sys_Chmod 444 ${1} |
---|
| 896 | fi |
---|
[128] | 897 | fi |
---|
[70] | 898 | # |
---|
| 899 | # Only if we use rsync |
---|
| 900 | #IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
| 901 | # |
---|
| 902 | #USUAL WAY |
---|
| 903 | mfput $1 $2 > out_rsync 2>&1 |
---|
| 904 | RET=$? |
---|
| 905 | |
---|
| 906 | # #RSYNC WITH NETWORK RSH CALL |
---|
[192] | 907 | # echo ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1 |
---|
| 908 | # ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1 |
---|
[70] | 909 | |
---|
| 910 | # #RSYNC WITH NFS USE |
---|
[192] | 911 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 912 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[70] | 913 | |
---|
| 914 | # RET=$? |
---|
| 915 | # IGCM_sys_Rsync_out $RET |
---|
| 916 | |
---|
| 917 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 918 | # (( RET=RET+$? )) |
---|
| 919 | |
---|
| 920 | if [ ${RET} -gt 0 ] ; then |
---|
| 921 | echo "IGCM_sys_Put_Out : error." |
---|
| 922 | cat out_rsync |
---|
| 923 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
| 924 | fi |
---|
| 925 | else |
---|
| 926 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 927 | fi |
---|
| 928 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 929 | return 0 |
---|
| 930 | } |
---|
| 931 | |
---|
| 932 | #D-#================================================== |
---|
| 933 | #D-function IGCM_sys_Get |
---|
| 934 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
| 935 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
| 936 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
| 937 | function IGCM_sys_Get { |
---|
| 938 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
| 939 | |
---|
| 940 | typeset DEST RET dm_liste ifile target |
---|
| 941 | |
---|
| 942 | if ( $DEBUG_sys ) ; then |
---|
| 943 | echo "IGCM_sys_Get :" $@ |
---|
| 944 | fi |
---|
| 945 | if [ $DRYRUN -le 2 ]; then |
---|
| 946 | if [ X${1} = X'/l' ] ; then |
---|
| 947 | # test if the first file is present in the old computation : |
---|
| 948 | eval set +A dm_liste \${${2}} |
---|
| 949 | else |
---|
| 950 | dm_liste=${1} |
---|
| 951 | fi |
---|
| 952 | eval DEST=\${${#}} |
---|
| 953 | |
---|
| 954 | # test if the (first) file is present in the old computation : |
---|
| 955 | IGCM_sys_TestFileArchive ${dm_liste[0]} |
---|
| 956 | RET=$? |
---|
| 957 | if [ ${RET} -gt 0 ] ; then |
---|
| 958 | echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ." |
---|
| 959 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 960 | return |
---|
| 961 | fi |
---|
| 962 | |
---|
| 963 | # SD : dm_liste is not suited for computing job |
---|
| 964 | # because we change filename during transfert |
---|
| 965 | # dm_liste is better suited for post-treatment |
---|
| 966 | #dm_liste=" " |
---|
| 967 | #(( ifile=1 )) |
---|
| 968 | #while [ $ifile -lt $# ] ; do |
---|
| 969 | # dm_liste=$( eval echo ${dm_liste} " "\${${ifile}} ) |
---|
| 970 | # (( ifile = ifile + 1 )) |
---|
| 971 | #done |
---|
| 972 | #DEST=$( eval echo \${${#}} ) |
---|
| 973 | |
---|
| 974 | #USUAL WAY |
---|
| 975 | mfget ${dm_liste[*]} ${DEST} > out_rsync 2>&1 |
---|
| 976 | #mfget $1 $2 > out_rsync 2>&1 |
---|
| 977 | RET=$? |
---|
| 978 | |
---|
| 979 | # #RSYNC WITH NETWORK RSH CALL |
---|
[192] | 980 | # echo ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 981 | # ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[70] | 982 | |
---|
| 983 | # #RSYNC WITH NFS USE |
---|
[192] | 984 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 985 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[70] | 986 | |
---|
| 987 | # RET=$? |
---|
| 988 | # IGCM_sys_Rsync_out $RET |
---|
| 989 | |
---|
| 990 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 991 | # (( RET=RET+$? )) |
---|
| 992 | |
---|
| 993 | if [ ${RET} -gt 0 ] ; then |
---|
| 994 | echo "IGCM_sys_Get : copy error." |
---|
| 995 | cat out_rsync |
---|
| 996 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 997 | fi |
---|
| 998 | else |
---|
| 999 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1000 | fi |
---|
| 1001 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 1002 | } |
---|
| 1003 | |
---|
| 1004 | ############################################################## A FINIR !! |
---|
| 1005 | |
---|
| 1006 | #D-#================================================== |
---|
| 1007 | #D-function IGCM_sys_GetDate_FichWork |
---|
| 1008 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
| 1009 | #D-* Examples: |
---|
| 1010 | #D- |
---|
| 1011 | function IGCM_sys_GetDate_FichWork { |
---|
| 1012 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
| 1013 | if ( $DEBUG_sys ) ; then |
---|
| 1014 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
| 1015 | fi |
---|
| 1016 | # donne la date filesys d'un fichier sur la machine work |
---|
| 1017 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
| 1018 | } |
---|
| 1019 | |
---|
| 1020 | #D-#================================================== |
---|
| 1021 | #D-function IGCM_sys_GetDate_FichArchive |
---|
| 1022 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
| 1023 | #D-* Examples: |
---|
| 1024 | #D- |
---|
| 1025 | function IGCM_sys_GetDate_FichArchive { |
---|
| 1026 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
| 1027 | if ( $DEBUG_sys ) ; then |
---|
| 1028 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
| 1029 | fi |
---|
| 1030 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
| 1031 | } |
---|
| 1032 | |
---|
| 1033 | ############################################################## |
---|
| 1034 | # REBUILD OPERATOR |
---|
| 1035 | |
---|
| 1036 | function IGCM_sys_rebuild { |
---|
| 1037 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
| 1038 | if ( $DEBUG_sys ) ; then |
---|
| 1039 | echo "IGCM_sys_rebuild :" $@ |
---|
| 1040 | fi |
---|
| 1041 | /homegpfs/rech/psl/rpsl035/bin/rebuild -f -o $@ |
---|
| 1042 | if [ $? -gt 0 ] ; then |
---|
| 1043 | echo "IGCM_sys_rebuild : erreur ${@}." |
---|
| 1044 | IGCM_debug_Exit "rebuild" |
---|
| 1045 | fi |
---|
| 1046 | |
---|
| 1047 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
| 1048 | } |
---|
| 1049 | |
---|
| 1050 | ############################################################ |
---|
| 1051 | # Activate Running Environnment Variables |
---|
| 1052 | |
---|
| 1053 | function IGCM_sys_activ_variables { |
---|
| 1054 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
| 1055 | if ( $DEBUG_sys ) ; then |
---|
| 1056 | echo "IGCM_sys_activ_variables " |
---|
| 1057 | fi |
---|
| 1058 | |
---|
| 1059 | # -------------------------------------------------------------------- |
---|
| 1060 | #D- MPI specifications |
---|
| 1061 | # -------------------------------------------------------------------- |
---|
| 1062 | |
---|
| 1063 | # -------------------------------------------------------------------- |
---|
| 1064 | #D- Other specifications |
---|
| 1065 | # -------------------------------------------------------------------- |
---|
| 1066 | |
---|
| 1067 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
| 1068 | |
---|
| 1069 | } |
---|
| 1070 | |
---|
| 1071 | ############################################################ |
---|
| 1072 | # Desactivate Running Environnment Variables |
---|
| 1073 | |
---|
| 1074 | function IGCM_sys_desactiv_variables { |
---|
| 1075 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
| 1076 | if ( $DEBUG_sys ) ; then |
---|
| 1077 | echo "IGCM_sys_desactiv_variables " |
---|
| 1078 | fi |
---|
| 1079 | # -------------------------------------------------------------------- |
---|
| 1080 | #D- MPI specifications |
---|
| 1081 | # -------------------------------------------------------------------- |
---|
| 1082 | |
---|
| 1083 | # -------------------------------------------------------------------- |
---|
| 1084 | #D- Other specifications |
---|
| 1085 | # -------------------------------------------------------------------- |
---|
| 1086 | |
---|
| 1087 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
| 1088 | |
---|
| 1089 | } |
---|
| 1090 | |
---|
| 1091 | ############################################################ |
---|
| 1092 | # Build run file |
---|
| 1093 | |
---|
| 1094 | function IGCM_sys_build_run_file { |
---|
| 1095 | IGCM_debug_PushStack "IGCM_sys_build_run_file" $@ |
---|
| 1096 | set -x |
---|
| 1097 | if ( $DEBUG_sys ) ; then |
---|
| 1098 | echo "IGCM_sys_build_run_file " $@ |
---|
| 1099 | fi |
---|
[395] | 1100 | |
---|
[162] | 1101 | NUM_PROC_OASIS=1 |
---|
[395] | 1102 | |
---|
| 1103 | # Set the number of processors for OCE here |
---|
| 1104 | NUM_PROC_OCE=5 |
---|
| 1105 | |
---|
| 1106 | (( NUM_PROC_ATM = BATCH_NUM_PROC_TOT - NUM_PROC_OASIS - NUM_PROC_OCE )) |
---|
[70] | 1107 | |
---|
| 1108 | if [ $1 = MPI2 ]; then |
---|
| 1109 | echo "IGCM_sys_build_run_file : error - MPI2 not available on vargas. " |
---|
| 1110 | IGCM_debug_Exit "IGCM_sys_build_run_file" |
---|
| 1111 | elif [ $1 = MPI1 ]; then |
---|
| 1112 | cat <<EOF > run_file |
---|
| 1113 | ./oasis |
---|
| 1114 | EOF |
---|
| 1115 | |
---|
[366] | 1116 | typeset i |
---|
[70] | 1117 | (( i = 0 )) |
---|
| 1118 | while [ ${i} -lt ${NUM_PROC_ATM} ] ; do |
---|
| 1119 | (( i = i + 1 )) |
---|
| 1120 | cat <<EOF >> run_file |
---|
| 1121 | ./lmdz.x |
---|
| 1122 | EOF |
---|
| 1123 | done |
---|
| 1124 | |
---|
[395] | 1125 | (( i = 0 )) |
---|
| 1126 | while [ ${i} -lt ${NUM_PROC_OCE} ] ; do |
---|
| 1127 | (( i = i + 1 )) |
---|
| 1128 | cat <<EOF >> run_file |
---|
[70] | 1129 | ./opa.xx |
---|
| 1130 | EOF |
---|
[395] | 1131 | done |
---|
| 1132 | |
---|
[70] | 1133 | wc -l run_file |
---|
| 1134 | fi |
---|
| 1135 | set +x |
---|
| 1136 | IGCM_debug_PopStack "IGCM_sys_build_run_file" |
---|
| 1137 | } |
---|