Changeset 1165 for trunk/libIGCM

Timestamp:

01/30/15 16:18:22 (9 years ago)

Author:

sdipsl

Message:

Add a /bin/sync after the rebuild sequence (only active for curie). Should solve (all?) file corruption observed recently. See #245

File:

• trunk/libIGCM/libIGCM_comp/libIGCM_comp.ksh (modified) (3 diffs)

trunk/libIGCM/libIGCM_comp/libIGCM_comp.ksh

@@ -1359 +1359 @@
   typeset comp compname comptagname card ListFilesName FileName0 NbFiles SaveOnArchive
   typeset i i_ file_in file_in_ file_out file_out_ file_outin file_outin_ generic_file_name nb_rebuild_file
-  typeset -Z4 j4
-  #BASH declare j4
+  typeset -Z4 j4 #BASH declare j4
   typeset list_file nlist_file
   typeset compactoutputs
 
+  # Initialize array hosting list of rebuilded files to copy
+  unset rebuildedActionsList
+
+  # Text compacting options
   compactoutputs=false
   if [ X${JobType} != XRUN ] ; then
@@ -1629 +1632 @@
             if [ $DRYRUN -le 1 ]; then
               if [ X${Pack} = Xtrue ] ; then
-                echo "IGCM_sys_PutBuffer_Out ${file_in} ${file_out}     " >> ${RUN_DIR}/REBUILD_${PeriodDateBegin}/rebuild.ksh
+                rebuildedActionsList[${#rebuildedActionsList[*]}]="IGCM_sys_PutBuffer_Out ${file_in} ${file_out}"
               else
-                echo "IGCM_sys_Put_Out ${file_in} ${file_out}           " >> ${RUN_DIR}/REBUILD_${PeriodDateBegin}/rebuild.ksh
+                rebuildedActionsList[${#rebuildedActionsList[*]}]="IGCM_sys_Put_Out ${file_in} ${file_out}"
               fi
-              echo "IGCM_debug_Verif_Exit_Post                          " >> ${RUN_DIR}/REBUILD_${PeriodDateBegin}/rebuild.ksh
-              echo "IGCM_sys_Rm ${generic_file_name}_[0-9]*.nc          " >> ${RUN_DIR}/REBUILD_${PeriodDateBegin}/rebuild.ksh
+              rebuildedActionsList[${#rebuildedActionsList[*]}]="IGCM_debug_Verif_Exit_Post"
+              rebuildedActionsList[${#rebuildedActionsList[*]}]="IGCM_sys_Rm ${generic_file_name}_[0-9]*.nc"
             fi
             SaveOnArchive=false
@@ -1688 +1691 @@
     echo
   done
+  # Append the sync call and the copy sequence to the IGCM_FlushRebuild function if needed
+  if [ ${#rebuildedActionsList[*]} -ne 0 ] ; then
+    echo "IGCM_sys_sync         " >> ${RUN_DIR}/REBUILD_${PeriodDateBegin}/rebuild.ksh
+    i=0
+    until [ ${i} -ge ${#rebuildedActionsList[*]} ]; do
+      echo ${rebuildedActionsList[$i]} >> ${RUN_DIR}/REBUILD_${PeriodDateBegin}/rebuild.ksh
+      (( i=i+1 ))
+    done
+  fi
   IGCM_debug_PopStack "IGCM_comp_Finalize"
 }