Changeset 388 for trunk

Timestamp:

11/24/10 11:36:09 (14 years ago)

Author:

brocksce

Message:

• Clean up

• Trap cdo error to avoid display of

cdo mulc: Open failed on >xxxx_tmp1.nc<
Unsupported file structure
Happens when ncks -Oh -x -v extracts nothing else than coordinate variables
That's the case for ocean variables such as zosga

File:

• trunk/libIGCM/AA_create_ts (modified) (2 diffs)

trunk/libIGCM/AA_create_ts

@@ -854 +854 @@
                 IGCM_sys_ncrcat --hst -v ${liste_coord}${var} ${liste_file_tmp[*]} ${config_UserChoices_JobName}_${DATE_BUILD}_${FlagDir}_${var}.nc
                 #
-#                 # Change time axis name to be CF compliant
-#                 if [ ${time_axis} != time_counter ]; then
-#                   IGCM_sys_ncrename -O -v ${time_axis},time_counter ${config_UserChoices_JobName}_${DATE_BUILD}_${FlagDir}_${var}.nc
-#                 fi
-                #
                 if [ "${FLAG_B}" = "TRUE" ] ; then
                     # WE CONCATENATE WITH EXISTING FILES
@@ -882 +877 @@
                         file_out_YE=${config_UserChoices_JobName}_${DATE_BUILD_END}_1Y_${var}.nc
                         #
+                        # Compute yearly average considering calendar
+                        # and set date of the mid year to 01/07 at 00:00
+                        IGCM_sys_cdo -settime,00:00 -setday,1 -setmon,7 -settunits,days -divdpy -yearsum -muldpm -selvar,${var} ${file_out} ${file_out_YE}
                         # Extract all ancillary variables except $var, they will be appended after the cdo command
                         # Needed because cdo applies calculs on all variables
                         IGCM_sys_ncks -Oh -x -v ${var} ${file_out} ${file_out_YE%%.nc}_tmp1.nc
-                        # This will remove the time axis because cdo rewrites severely with only considered useful variables 
-                        IGCM_sys_cdo -mulc,1 ${file_out_YE%%.nc}_tmp1.nc ${file_out_YE%%.nc}_tmp2.nc
-                        # Compute yearly average considering calendar
-                        # and set date of the mid year to 01/07 at 00:00
-                        IGCM_sys_cdo -settime,00:00 -setday,1 -setmon,7 -settunits,days -divdpy -yearsum -muldpm -selvar,${var} ${file_out} ${file_out_YE}
-                        # Now append all ancillary variables
-                        IGCM_sys_ncks -h -A ${file_out_YE%%.nc}_tmp2.nc ${file_out_YE}
+                        # This will remove the time axis because cdo rewrites severely with only considered useful variables
+                        IGCM_sys_cdo -mulc,1 ${file_out_YE%%.nc}_tmp1.nc ${file_out_YE%%.nc}_tmp2.nc > /dev/null 2>&1
+                        if [ $? -eq 0 ] ; then
+                                # Now append all ancillary variables if previous cdo operator ok
+                                IGCM_sys_ncks -h -A ${file_out_YE%%.nc}_tmp2.nc ${file_out_YE}
+                        fi
+
                         # Put global history attribut
                         IGCM_sys_ncatted -Oh -a history,global,o,c,"build by libIGCM/create_ts" ${file_out_YE}