#-Q- curie ###################### #-Q- curie ## CURIE TGCC/CEA ## #-Q- curie ###################### #-Q- curie #MSUB -r ATL_ORCH # Nom du job #-Q- curie #MSUB -o ATL_ORCH.out_%I #-Q- curie #MSUB -e ATL_ORCH.out_%I #-Q- curie #MSUB -n 1 # Reservation du processus #-Q- curie #MSUB -T 7200 # Limite de temps elapsed du job #-Q- curie #MSUB -q ::default_node:: #-Q- curie #MSUB -c ::default_core:: #-Q- curie #MSUB -Q normal #-Q- curie #MSUB -A ::default_project:: #-Q- curie set +x #-Q- irene ###################### #-Q- irene ## IRENE TGCC/CEA ## #-Q- irene ###################### #-Q- irene #MSUB -r ATL_ORCH # Job name #-Q- irene #MSUB -o ATL_ORCH.out_%I #-Q- irene #MSUB -e ATL_ORCH.out_%I #-Q- irene #MSUB -n 1 #-Q- irene #MSUB -T 7200 # Maximum elapsed time #-Q- irene #MSUB -q ::default_node:: #-Q- irene #MSUB -c ::default_core:: #-Q- irene #MSUB -Q normal #-Q- irene #MSUB -A ::default_post_project:: #-Q- irene #MSUB -m store,work,scratch #-Q- irene set +x #-Q- irene-amd ###################### #-Q- irene-amd ## IRENE TGCC/CEA ## #-Q- irene-amd ###################### #-Q- irene-amd #MSUB -r ATL_ORCH # Job name #-Q- irene-amd #MSUB -o ATL_ORCH.out_%I #-Q- irene-amd #MSUB -e ATL_ORCH.out_%I #-Q- irene-amd #MSUB -n 1 #-Q- irene-amd #MSUB -T 7200 # Maximum elapsed time #-Q- irene-amd #MSUB -q ::default_node:: #-Q- irene-amd #MSUB -c ::default_core:: #-Q- irene-amd #MSUB -Q normal #-Q- irene-amd #MSUB -A ::default_post_project:: #-Q- irene-amd #MSUB -m store,work,scratch #-Q- irene-amd set +x #-Q- ada #!/bin/ksh #-Q- ada ####################### #-Q- ada ## ADA IDRIS ## #-Q- ada ####################### #-Q- ada # @ job_type = mpich #-Q- ada # @ requirements = (Feature == "prepost") #-Q- ada # Temps Elapsed max. d'une requete hh:mm:ss #-Q- ada # @ wall_clock_limit = 1:00:00 #-Q- ada # Nom du travail LoadLeveler #-Q- ada # @ job_name = ATL_ORCH #-Q- ada # Fichier de sortie standard du travail #-Q- ada # @ output = $(job_name).$(jobid) #-Q- ada # Fichier de sortie d'erreur du travail #-Q- ada # @ error = $(job_name).$(jobid) #-Q- ada # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) #-Q- ada # @ notification = error #-Q- ada # @ environment = $POST_DIR ; $Script_Post_Output ; $SUBMIT_DIR ; $libIGCM ; $DEBUG_debug ; $BigBrother ; $postProcessingStopLevel ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $RESOL_SBG ; $YEARS ; $DIR_OUT ; $MASTER ; $libIGCM_SX ; wall_clock_limit=$(wall_clock_limit) #-Q- ada # @ queue #-Q- obelix ###################### #-Q- obelix ## OBELIX LSCE ## #-Q- obelix ###################### #-Q- obelix #PBS -N ATL_ORCH #-Q- obelix #PBS -m a #-Q- obelix #PBS -j oe #-Q- obelix #PBS -q medium #-Q- obelix #PBS -o ATL_ORCH.$$ #-Q- obelix #PBS -S /bin/ksh #-Q- ifort_CICLAD ###################### #-Q- ifort_CICLAD ## CICLAD IPSL ## #-Q- ifort_CICLAD ###################### #-Q- ifort_CICLAD #PBS -N ATL_ORCH #-Q- ifort_CICLAD #PBS -m a #-Q- ifort_CICLAD #PBS -j oe #-Q- ifort_CICLAD #PBS -q std #-Q- ifort_CICLAD #PBS -S /bin/ksh #-Q- default #!/bin/ksh #-Q- default ################## #-Q- default ## DEFAULT HOST ## #-Q- default ################## #************************************************************** # Author: Martial Mancip # Contact: Martial.Mancip__at__ipsl.jussieu.fr # $Revision:: $ Revision of last commit # $Author:: $ Author of last commit # $Date:: $ Date of last commit # IPSL (2006) # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC # #************************************************************** #set -eu #set -vx date #-Q- ada export OMP_NUM_THREADS=1 #D- Task type DO NOT CHANGE (computing, post-processing or checking) TaskType=post-processing ######################################################################## . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh . ${libIGCM}/libIGCM_card/libIGCM_card.ksh . ${libIGCM}/libIGCM_date/libIGCM_date.ksh #------- . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh . ${libIGCM}/libIGCM_config/libIGCM_config.ksh #------- IGCM_sys_MkdirWork ${RUN_DIR_PATH} IGCM_sys_Cd ${RUN_DIR_PATH} #------- ( ${DEBUG_debug} ) && IGCM_debug_Check ( ${DEBUG_debug} ) && IGCM_card_Check ( ${DEBUG_debug} ) && IGCM_date_Check ######################################################################## #set -vx # ------------------------------------------------------------------ # Test if all was right before proceeding further # ------------------------------------------------------------------ IGCM_debug_Verif_Exit if [ ${StandAlone} = true ] ; then CARD_DIR=${SUBMIT_DIR} else CARD_DIR=${RUN_DIR_PATH} IGCM_sys_Get_Master ${SUBMIT_DIR}/config.card ${RUN_DIR_PATH} IGCM_sys_Get_Master ${SUBMIT_DIR}/run.card ${RUN_DIR_PATH} IGCM_sys_Get_Master ${SUBMIT_DIR}/COMP ${RUN_DIR_PATH} IGCM_sys_Get_Master ${SUBMIT_DIR}/POST ${RUN_DIR_PATH} fi #================================== # First of all # # Read libIGCM compatibility version in config.card # Read UserChoices section # Read Ensemble section # Read Post section # Define all netcdf output directories #================================== IGCM_config_CommonConfiguration ${CARD_DIR}/config.card # ------------------------------------------------------------------ # Activate BigBrother so as to supervise this job # ------------------------------------------------------------------ IGCM_debug_BigBro_Initialize #================================== # Then set up several directories #================================== R_ATLAS=ATLAS/SE_${YEARS} R_OUT_SRF=${R_SAVE}/SRF DIR_OUT=${DIR_OUT:=SE} RUN_DIR=${RUN_DIR_PATH}/ATLAS_ORCHIDEE_${YEARS} IGCM_sys_MkdirArchive ${R_FIGR} IGCM_sys_MkdirWork ${RUN_DIR} IGCM_sys_Cd ${RUN_DIR} # -------------------------------------------- # Insert your commands between III...III lines # and precise produced directories to save # IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII IGCM_sys_Get ${R_OUT_SRF}/Analyse/${DIR_OUT}/${config_UserChoices_JobName}_SE_${YEARS}_1M_sechiba_history.nc ${RUN_DIR} ls ${CARD_DIR}/POST/ | egrep "atlas_p_(ORCHIDEE|SECHIBA).*\.cfg" 2>/dev/null 1>&2 [ ${?} -ne 0 ] && PATH_ATLAS=${FER_ATLAS} || PATH_ATLAS=${CARD_DIR}/POST IGCM_sys_atlas -o ${RUN_DIR}/${R_ATLAS}/SRF -l ${PATH_ATLAS}/atlas_p_ORCHIDEE_diag1_*.cfg \ ${PATH_ATLAS}/atlas_p_SECHIBA_diag1_*.cfg \ ${PATH_ATLAS}/atlas_p_ORCHIDEE_diag2_a.cfg ${RUN_DIR}/${config_UserChoices_JobName}_SE_${YEARS}_1M_sechiba_history.nc # IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII # Put ferret journal files together for file in $( ls ${R_ATLAS}/SRF/*/*jnl ) ; do echo -e "\n\n################################" ; echo -e "$file\n" ; cat $file ; done > ${R_ATLAS}/SRF/allferretscript.txt # Clear some files find . \( -name "*.stdout" -o -name "*.jnl" \) -print -exec rm -f {} \; # Save files IGCM_sys_Put_Dir ATLAS ${R_FIGR} IGCM_sys_Rm -Rf ATLAS IGCM_sys_Rm ${config_UserChoices_JobName}_SE_${YEARS}_1M_sechiba_history.nc # DODS copy if [ X${config_Post_DodsCopy} = XTRUE ] ; then IGCM_sys_TestDirArchive ${R_FIGR}/${R_ATLAS} [ $? = 0 ] && IGCM_sys_Put_Dods ${R_ATLAS} fi # Clean RUN_DIR_PATH (necessary for cesium and titane only) IGCM_sys_RmRunDir -Rf ${RUN_DIR_PATH} # ------------------------------------------------------------------ # Finalize BigBrother to inform that the jobs end # ------------------------------------------------------------------ IGCM_debug_BigBro_Finalize