source: trunk/libIGCM

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Diff Rev Age Author
(edit) @949   11 years sdipsl

obelix case. see #125
(edit) @948   11 years sdipsl

catch JobID to be able to connect computing trees and post-processing trees. See #125
Obelix not yet done.
(edit) @947   11 years sdipsl

Bugfix affecting ada looking after file on gaya : must use IGCM_sys_TestDirArchive

(edit) @946   11 years mafoipsl

Bug fixed in #945.

(edit) @945   11 years mafoipsl

On ada, consolidation of IGCM_sys_check_quota. Exemple with : 15.69% used.

(edit) @944   11 years sdipsl

we want it quiet : atlas_env_ada_bash
it will disturb debug mode otherwise
(edit) @943   11 years mafoipsl

In libIGCM_config, IGCM_config_Finalize, use RmRunDir? to have a dummy call at IDRIS. TMPDIR has to be deleted by the system.

(edit) @941   11 years sdipsl

Adapt instrumentation for this kind of syntax:
# IGCM_sys_ncrcat -p ${dir} ${liste_file_tmp} --output ${output}
# IGCM_sys_ncrcat -x -v ${list_var} -p ${dir} ${liste_file_tmp} --output ${output}
(edit) @939   11 years sdipsl

cleanup
(edit) @938   11 years sdipsl

cleanup.
replace out_rsync by /tmp/out_command.$$
(edit) @936   11 years sdipsl

bugfix again with instrumentation. Should be fine now...
syntax error in libIGCM_sys
(edit) @934   11 years sdipsl

Bugfix again with IGCM_sys_Get|GetBuffer? instrumentation
(edit) @933   11 years sdipsl

properly remove RUN_DIR_PATH used by AA_job on curie. see #141
but add some check to be sure RUN_DIR_PATH do not point to important directory.
Indeed within AA_Job you can overwrite RUN_DIR_PATH and define something like this:
RUN_DIR_PATH=$SCRATCHDIR
You don't want to erase your $SCRATCHDIR don't you

(edit) @932   11 years sdipsl

clean-up old fashion instrumentation trace
(edit) @931   11 years sdipsl

Bugfix with IGCM_sys_Get|GetBuffer? instrumentation
Avoid collision with testing functions
(edit) @929   11 years sdipsl

machine cleanup
whitespace cleanup
(edit) @928   11 years sdipsl

clean-up
(edit) @927   11 years sdipsl

remove AA_rebuild_fromArchive. AA_rebuild_fromWorkdir can do both
(edit) @926   11 years sdipsl

Add instrumentation for IGCM_sys_ncrcat IGCM_sys_ncecat IGCM_sys_ncra IGCM_sys_ncks IGCM_sys_cdo see #140
stack files handling : one stack file per TaskType? : computing.stack, post-processsing, checking.stack
(edit) @925   11 years sdipsl

Add IGCM_sys_Put_Out and IGCM_sys_PutBuffer_Out to the instrumented functions
(edit) @924   11 years sdipsl

Enhance IGCM_debug_sizeOfTabContent prior to further work on #140
(edit) @923   11 years sdipsl

cleanup
(edit) @922   11 years sdipsl

Once per simulation send email containing estimated consumed hours for the whole simulation and a recommended PeriodNb?
(edit) @921   11 years sdipsl

Not necessary ...
(edit) @920   11 years sdipsl

factorization
(edit) @919   11 years sdipsl

Bugfix IGCM_date_DaysIn*Period. See #159
(edit) @918   11 years sdipsl

Active instrumentation #140 disturbs this kind of call
TarFileLocation?=$( IGCM_sys_PrepareTaredRestart ${TarFileFound?} )
(edit) @917   11 years sdipsl

Adapt for diffenrent cases : copy to a file, copy to a directory, and rename during copy.
(edit) @916   11 years sdipsl

add IGCM_sys_Cp to the instrumented functions list
fix a bug. In this syntax, length is a length not an indice ${variable:start:length}
(edit) @915   11 years sdipsl

call IGCM_debug_PrintInfosActions only for instrumented functions
(edit) @914   11 years sdipsl

typo highlighted by check functions
(edit) @913   11 years sdipsl

refactoring (supervisor related blocks)
introducing revisited instrumentation from CEA audit see #140
IGCM_sys_Get* IGCM_sys_rebuild* have instrumentation
IGCM_sys_Put* IGCM_sys_nc* IGCM_sys_cdo IGCM_sys_tar not yet instrumented
Not fully tested yet. Use at your own risks
(edit) @912   11 years sdipsl

remove machines that are not available anymore
cleanup
(edit) @911   11 years sdipsl
  • Ada compute node don't see gaya
(edit) @910   11 years sdipsl

In some case Script_output was not saved. See #132
(edit) @909   11 years mafoipsl

ada : don't use rsh to find gaya HOME. It breakes script and postproccessing jobs are not submitted. Use sed to switch from /linkhome/rech/... (HOME adapp) or /smphome/rech/... (HOME ada) to /u/rech/... (HOME gaya).
(edit) @908   11 years sdipsl
  • take into account SeasonalFrequencyOffset See #154
(edit) @907   11 years sdipsl

svn propset svn:keywords "Revision Date Author" AA_clean_year
(edit) @906   11 years sdipsl
  • cleanup
  • whitespace-cleanup
(edit) @905   11 years sdipsl

-cleanup
(edit) @904   11 years sdipsl
  • handle *Y packed files. See #134
  • whitespace-cleanup
(edit) @903   11 years sdipsl
  • Dods copy is controled by an option in config.card/[Post]. See #150
(edit) @902   11 years sdipsl
  • further enhance messages when we bring in restart files
  • whitespace-cleanup
(edit) @901   11 years sdipsl
  • can monitor other frequency not only what's in TS_MO. see #157
(edit) @900   11 years labetoulle

Remove suffix ${CumulPeriod?} from ${JobName?} when resubmitting (#144).
(edit) @899   11 years mafoipsl

!AA_TimeSeries_Checker : Switch to simplified test because it's working on adapp and on curie.

At IDRIS use 'adapp' to run !TimeSeries_Checker instead of ada. HOMEGAYA (ie gaya files) is accessible (through NFS) by adapp and not by ada.
More information here : ​http://www.idris.fr/adapp/intro_adapp.html
(edit) @898   11 years sdipsl

Enhance message when Section or Option do not exist. see #145
(edit) @897   11 years sdipsl

try to enhance messages when we bring in restart files
try to avoid meaningless messages as well
see #135
(edit) @896   11 years sdipsl
  • ask confirmation before erasing something. see #133
(edit) @895   11 years sdipsl
(edit) @894   11 years sdipsl
  • clearer message when error
(edit) @893   11 years sdipsl
  • to be able to chain DRYRUN execution
(edit) @892   11 years sdipsl
(edit) @891   11 years sdipsl
  • correct a typo
(edit) @890   11 years sdipsl
  • introduce IGCM_config_DateCoherency function see #79
  • start cleaning IGCM_config_PeriodStart
  • rename IGCM_config_Analyse_PeriodLength by IGCM_config_DaysInPeriodLength
(edit) @889   11 years sdipsl
  • to avoid future side effects with IGCM_date_DaysInCurrentPeriod, IGCM_date_DaysInPreviousPeriod, IGCM_date_DaysInNextPeriod

useful for #79
(edit) @888   11 years sdipsl
  • find tar file in dmf_import also for the hindcast/forecast case
(edit) @887   11 years mafoipsl

On ada, add a suffix to have a unique jobname for QsubPost.
(edit) @886   11 years labetoulle

Fix TimeSeries_Checker in leap calendar (see #148).
(edit) @885   11 years mafoipsl

For RESTART files, patterns ${RestartJobName?}_YYYYMMDD_YYYYMMDD_restart.tar and ${RestartJobName?}_restart_YYYYMMDD_YYYYMMDD.tar (used into dmf_import) are recognized.
(edit) @884   11 years mafoipsl

add treatment to recognize RESTART file with this pattern : *_20781231_20781231_*.tar. Correction of #152.
(edit) @883   11 years mafoipsl

On ada , use STOREHOST variable instead of gaya directly.
(edit) @882   11 years mafoipsl

On ada, since june 18th, tha variable HOME changed. It's like /smphome/... on computer nodes and like /linkhome/... on front-end and pre-post nodes. See : ​http://www.idris.fr/su/Shared/ldap.html.
Use rsh gaya 'echo $HOME' to set ARCHIVE in libIGCM_sys_ada.ksh
(edit) @881   11 years mafoipsl

For LSCE, add asterix* with same treatment as obelix.
(edit) @880   11 years mafoipsl

On curie, define time limit for post-processing jobs : rebuild and pack_output : 10h

  • pack_debug : 1h
  • pack_restart, monitoring and atlas : 2 h
  • TS : 20 h
  • SE : 10 h

On curie, add default project initialisation and usage for TimeSeries_Checker. Necessary for interactive usage of TimeSeries_Checker. Works since ins_job revision 2091.
(edit) @874   11 years sdipsl
  • Only comments
(edit) @873   11 years sdipsl
  • Send message related to end of job and end of simulation
(edit) @872   11 years sdipsl
  • introduce a random error mechanism
  • correct a typo
(edit) @870   11 years sdipsl
  • Enhance a comment
(edit) @869   11 years sdipsl
  • Enhance error message by providing the stack call tree when error has been detected
  • No more fullstack file. Everything is in the stack file
  • Log un encoded message to ease debuging
(edit) @868   11 years sdipsl
  • Initialize Big Brother mode from the main Job
  • save message sequence in a specific file to reuse it later
  • correct a typo
(edit) @864   11 years sdipsl
  • hindcast/forecast : can apply perturbation to any component. See #89
(edit) @863   11 years jgipsl

Changed to have rebuild in a directory with apropriate name for curie. The old directory will continue to exist containg a link to the new one.

(edit) @862   11 years jgipsl

Corrections for run at obelix/LSCE.
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