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namelist_pisces_ref in NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA/cfgs/SHARED – NEMO

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source: NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA/cfgs/SHARED/namelist_pisces_ref @ 12525

Last change on this file since 12525 was 12525, checked in by aumont, 4 years ago
DVM of mesozooplankton + slight changes on prognostic ligands
Property svn:mime-type set to `text/x-fortran`
File size: 32.7 KB

Rev	Line
[3875]	1	!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
[7646]	2	!! PISCES reference namelist
[3875]	3	!! 1 - air-sea exchange (nampisext)
	4	!! 2 - biological parameters (nampisbio)
	5	!! 3 - parameters for nutrient limitations (nampislim)
	6	!! 4 - parameters for phytoplankton (nampisprod,nampismort)
	7	!! 5 - parameters for zooplankton (nampismes,nampiszoo)
	8	!! 6 - parameters for remineralization (nampisrem)
	9	!! 7 - parameters for calcite chemistry (nampiscal)
	10	!! 8 - parameters for inputs deposition (nampissed)
	11	!! 11 - Damping (nampisdmp)
[7646]	12	!-----------------------------------------------------------------------
	13	&nampismod ! Model used
	14	!-----------------------------------------------------------------------
	15	ln_p2z = .false. ! LOBSTER model used
	16	ln_p4z = .true. ! PISCES model used
	17	ln_p5z = .false. ! PISCES QUOTA model used
	18	ln_ligand = .false. ! Enable organic ligands
[10226]	19	ln_sediment = .false. ! Enable sediment module
[7646]	20	/
	21	!-----------------------------------------------------------------------
[3875]	22	&nampisext ! air-sea exchange
[7646]	23	!-----------------------------------------------------------------------
[3875]	24	ln_co2int = .false. ! read atm pco2 from a file (T) or constant (F)
	25	atcco2 = 280. ! Constant value atmospheric pCO2 - ln_co2int = F
	26	clname = 'atcco2.txt' ! Name of atm pCO2 file - ln_co2int = T
	27	nn_offset = 0 ! Offset model-data start year - ln_co2int = T
	28	! ! If your model year is iyy, nn_offset=(years(1)-iyy)
	29	! ! then the first atmospheric CO2 record read is at years(1)
	30	/
[7646]	31	!-----------------------------------------------------------------------
[3875]	32	&nampisatm ! Atmospheric prrssure
[7646]	33	!-----------------------------------------------------------------------
[4329]	34	! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
	35	! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
[11536]	36	sn_patm = 'presatm' , -1. , 'patm' , .true. , .true. , 'yearly' , '' , '' , ''
	37	sn_atmco2 = 'presatmco2' , -1. , 'xco2' , .true. , .true. , 'yearly' , '' , '' , ''
[3875]	38	cn_dir = './' ! root directory for the location of the dynamical files
	39	!
[7646]	40	ln_presatm = .false. ! constant atmopsheric pressure (F) or from a file (T)
	41	ln_presatmco2 = .false. ! Read spatialized atm co2 files [ppm] if TRUE
[3875]	42	/
[7646]	43	!-----------------------------------------------------------------------
[3875]	44	&nampisbio ! biological parameters
[7646]	45	!-----------------------------------------------------------------------
[3875]	46	nrdttrc = 1 ! time step frequency for biology
	47	wsbio = 2. ! POC sinking speed
	48	xkmort = 2.E-7 ! half saturation constant for mortality
	49	ferat3 = 10.E-6 ! Fe/C in zooplankton
[7646]	50	wsbio2 = 50. ! Big particles sinking speed
	51	wsbio2max = 50. ! Big particles maximum sinking speed
[10075]	52	wsbio2scale = 5000. ! Big particles length scale of sinking
[7646]	53	! ! ln_ligand enabled
[10363]	54	ldocp = 1.E-4 ! Phyto ligand production per unit doc
	55	ldocz = 1.E-4 ! Zoo ligand production per unit doc
[10375]	56	lthet = 1.0 ! Proportional loss of ligands due to Fe uptake
[7646]	57	! ! ln_p5z enabled
[12348]	58	no3rat3 = 0.151 ! N/C ratio in zooplankton
	59	po4rat3 = 0.00943 ! P/C ratio in zooplankton
[3875]	60	/
[7646]	61	!-----------------------------------------------------------------------
[10227]	62	&namp4zlim ! parameters for nutrient limitations for PISCES std - ln_p4z
[7646]	63	!-----------------------------------------------------------------------
[3875]	64	concnno3 = 1.e-6 ! Nitrate half saturation of nanophytoplankton
[5148]	65	concdno3 = 3.E-6 ! Nitrate half saturation for diatoms
[3875]	66	concnnh4 = 1.E-7 ! NH4 half saturation for phyto
[4529]	67	concdnh4 = 3.E-7 ! NH4 half saturation for diatoms
	68	concnfer = 1.E-9 ! Iron half saturation for phyto
	69	concdfer = 3.E-9 ! Iron half saturation for diatoms
[5148]	70	concbfe = 1.E-11 ! Iron half-saturation for DOC remin.
	71	concbnh4 = 2.E-8 ! NH4 half saturation for DOC remin.
	72	concbno3 = 2.E-7 ! Nitrate half saturation for DOC remin.
[3875]	73	xsizedia = 1.E-6 ! Minimum size criteria for diatoms
	74	xsizephy = 1.E-6 ! Minimum size criteria for phyto
	75	xsizern = 3.0 ! Size ratio for nanophytoplankton
	76	xsizerd = 3.0 ! Size ratio for diatoms
[12348]	77	xksi1 = 4.E-6 ! half saturation constant for Si uptake
[5148]	78	xksi2 = 20E-6 ! half saturation constant for Si/C
[3875]	79	xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization
	80	qnfelim = 7.E-6 ! Optimal quota of phyto
	81	qdfelim = 7.E-6 ! Optimal quota of diatoms
	82	caco3r = 0.3 ! mean rain ratio
[7646]	83	oxymin = 1.E-6 ! Half-saturation constant for anoxia
[3875]	84	/
[7646]	85	!-----------------------------------------------------------------------
[10227]	86	&namp5zlim ! parameters for nutrient limitations PISCES QUOTA - ln_p5z
[7646]	87	!-----------------------------------------------------------------------
	88	concnno3 = 3e-6 ! Nitrate half saturation of nanophytoplankton
[12525]	89	concpno3 = 8e-7 ! Nitrate half saturation of picophytoplankton
[12348]	90	concdno3 = 5E-6 ! Phosphate half saturation for diatoms
	91	concnnh4 = 1E-6 ! NH4 half saturation for phyto
[12525]	92	concpnh4 = 2.3E-7 ! NH4 half saturation for picophytoplankton
[12348]	93	concdnh4 = 1.7E-6 ! NH4 half saturation for diatoms
[7646]	94	concnpo4 = 3E-6 ! PO4 half saturation for phyto
[12525]	95	concppo4 = 8E-7 ! PO4 half saturation for picophytoplankton
[12348]	96	concdpo4 = 5E-6 ! PO4 half saturation for diatoms
[12525]	97	concnfer = 3E-9 ! Iron half saturation for phyto
	98	concpfer = 8E-10 ! Iron half saturation for picophytoplankton
	99	concdfer = 5E-9 ! Iron half saturation for diatoms
[7646]	100	concbfe = 1.E-11 ! Half-saturation for Fe limitation of Bacteria
	101	concbnh4 = 1.E-7 ! NH4 half saturation for phyto
	102	concbno3 = 5.E-7 ! Phosphate half saturation for diatoms
	103	concbpo4 = 1E-7 ! Phosphate half saturation for bacteria
	104	xsizedia = 1.E-6 ! Minimum size criteria for diatoms
	105	xsizephy = 1.E-6 ! Minimum size criteria for phyto
[12348]	106	xsizepic = 5.E-7 ! Minimum size criteria for picophyto
	107	xsizern = 3.0 ! Size ratio for nanophytoplankton
	108	xsizerp = 2.0 ! Size ratio for picophytoplankton
[7646]	109	xsizerd = 4.0 ! Size ratio for diatoms
[12348]	110	xksi1 = 8.E-6 ! half saturation constant for Si uptake
[12525]	111	xksi2 = 20E-6 ! half saturation constant for Si/C
[7646]	112	xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization
[12348]	113	caco3r = 0.5 ! mean rain ratio
[7646]	114	oxymin = 1.E-6 ! Half-saturation constant for anoxia
	115	/
	116	!-----------------------------------------------------------------------
[9356]	117	&namp5zquota ! parameters for nutrient limitations PISCES quota - ln_p5z
[7646]	118	!-----------------------------------------------------------------------
	119	qfnopt = 7.E-6 ! Optimal Fe quota of nanophyto
	120	qfpopt = 7.E-6 ! Optimal Fe quota of picophyto
	121	qfdopt = 7.E-6 ! Optimal quota of diatoms
[12348]	122	qnnmin = 0.61 ! Minimal N quota for nano
	123	qnnmax = 1.25 ! Maximal N quota for nano
	124	qpnmin = 0.24 ! Minimal P quota for nano
	125	qpnmax = 1.35 ! Maximal P quota for nano
	126	qnpmin = 1.04 ! Minimal N quota for pico
	127	qnpmax = 1.525 ! Maximal N quota for pico
	128	qppmin = 0.19 ! Minimal P quota for pico
	129	qppmax = 1.15 ! Maximal P quota for pico
	130	qndmin = 0.53 ! Minimal N quota for diatoms
	131	qndmax = 1.25 ! Maximal N quota for diatoms
	132	qpdmin = 0.24 ! Minimal P quota for diatoms
	133	qpdmax = 1.525 ! Maximal P quota for diatoms
	134	qfnmax = 80E-6 ! Maximal Fe quota for nano
	135	qfpmax = 80E-6 ! Maximal Fe quota for pico
	136	qfdmax = 80E-6 ! Maximal Fe quota for diatoms
[7646]	137	/
	138	!-----------------------------------------------------------------------
[3875]	139	&nampisopt ! parameters for optics
[7646]	140	!-----------------------------------------------------------------------
[4329]	141	! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
	142	! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
[11536]	143	sn_par = 'par.orca' , 24. , 'fr_par' , .true. , .true. , 'yearly' , '' , '' , ''
[3875]	144	cn_dir = './' ! root directory for the location of the dynamical files
	145	ln_varpar = .true. ! boolean for PAR variable
	146	parlux = 0.43 ! Fraction of shortwave as PAR
	147	/
[7646]	148	!-----------------------------------------------------------------------
[9356]	149	&namp4zprod ! parameters for phytoplankton growth for PISCES std - ln_p4z
[7646]	150	!-----------------------------------------------------------------------
	151	pislopen = 2. ! P-I slope
	152	pisloped = 2. ! P-I slope for diatoms
[4529]	153	xadap = 0. ! Adaptation factor to low light
[7646]	154	excretn = 0.05 ! excretion ratio of phytoplankton
	155	excretd = 0.05 ! excretion ratio of diatoms
[5148]	156	bresp = 0.033 ! Basal respiration rate
	157	chlcnm = 0.033 ! Maximum Chl/C in nanophytoplankton
	158	chlcdm = 0.05 ! Maximum Chl/C in diatoms
	159	chlcmin = 0.004 ! Minimum Chl/c in phytoplankton
[3875]	160	fecnm = 40E-6 ! Maximum Fe/C in nanophytoplankton
[5148]	161	fecdm = 40E-6 ! Maximum Fe/C in diatoms
[12348]	162	grosip = 0.13 ! mean Si/C ratio
[3875]	163	/
[7646]	164	!-----------------------------------------------------------------------
[9356]	165	&namp5zprod ! parameters for phytoplankton growth for PISCES quota- ln_p5z
[7646]	166	!-----------------------------------------------------------------------
[12348]	167	pislopen = 4. ! P-I slope of nanophytoplankton
	168	pislopep = 4. ! P-I slope for picophytoplankton
	169	pisloped = 4. ! P-I slope for diatoms
[7646]	170	excretn = 0.05 ! excretion ratio of phytoplankton
	171	excretp = 0.05 ! excretion ratio of picophytoplankton
	172	excretd = 0.05 ! excretion ratio of diatoms
	173	xadap = 0. ! Adaptation factor to low light
	174	bresp = 0.02 ! Basal respiration rate
[12348]	175	thetannm = 0.3 ! Maximum Chl/N in nanophytoplankton
	176	thetanpm = 0.3 ! Maximum Chl/N in picophytoplankton
	177	thetandm = 0.4 ! Maximum Chl/N in diatoms
[7646]	178	chlcmin = 0.004 ! Minimum Chl/c in phytoplankton
[12348]	179	grosip = 0.11 ! mean Si/C ratio
[7646]	180	/
	181	!-----------------------------------------------------------------------
[9356]	182	&namp4zmort ! parameters for phytoplankton sinks for PISCES std - ln_p4z
[7646]	183	!-----------------------------------------------------------------------
[12525]	184	wchln = 0.01 ! quadratic mortality of phytoplankton
[3875]	185	wchld = 0.01 ! maximum quadratic mortality of diatoms
	186	wchldm = 0.03 ! maximum quadratic mortality of diatoms
[12525]	187	mpratn = 0.01 ! phytoplankton mortality rate
	188	mpratd = 0.01 ! Diatoms mortality rate
[3875]	189	/
[7646]	190	!-----------------------------------------------------------------------
[9356]	191	&namp5zmort ! parameters for phytoplankton sinks for PISCES quota - ln_p5z
[7646]	192	!-----------------------------------------------------------------------
	193	wchln = 0.01 ! quadratic mortality of nanophytoplankton
	194	wchlp = 0.01 ! quadratic mortality of picophytoplankton
	195	wchld = 0.01 ! maximum quadratic mortality of diatoms
[12348]	196	wchldm = 0.03 ! maximum quadratic mortality of diatoms
[7646]	197	mpratn = 0.01 ! nanophytoplankton mortality rate
	198	mpratp = 0.01 ! picophytoplankton mortality rate
[12348]	199	mpratd = 0.01 ! Diatoms mortality rate
[7646]	200	/
	201	!-----------------------------------------------------------------------
[9356]	202	&namp4zmes ! parameters for mesozooplankton for PISCES std - ln_p4z
[7646]	203	!-----------------------------------------------------------------------
[3875]	204	part2 = 0.75 ! part of calcite not dissolved in mesozoo guts
	205	grazrat2 = 0.75 ! maximal mesozoo grazing rate
[4529]	206	resrat2 = 0.005 ! exsudation rate of mesozooplankton
[3875]	207	mzrat2 = 0.03 ! mesozooplankton mortality rate
[10363]	208	xpref2d = 1. ! mesozoo preference for diatoms
	209	xpref2n = 0.3 ! mesozoo preference for nanophyto.
	210	xpref2z = 1. ! mesozoo preference for microzoo.
	211	xpref2c = 0.3 ! mesozoo preference for poc
[3875]	212	xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton
	213	xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton
	214	xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton
	215	xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton
	216	xthresh2 = 3E-7 ! Food threshold for grazing
[5148]	217	xkgraz2 = 20.E-6 ! half saturation constant for meso grazing
[4529]	218	epsher2 = 0.35 ! Efficicency of Mesozoo growth
[10363]	219	epsher2min = 0.35 ! Minimum efficiency of mesozoo growth
[4529]	220	sigma2 = 0.6 ! Fraction of mesozoo excretion as DOM
[3875]	221	unass2 = 0.3 ! non assimilated fraction of P by mesozoo
[10416]	222	grazflux = 3.e3 ! flux-feeding rate
[12525]	223	ln_dvm_meso = .false. ! Activates DVM for mesozooplankton
	224	xfracmig = 0.3 ! Fraction of mesozooplankton performing DVM
[3875]	225	/
[7646]	226	!-----------------------------------------------------------------------
	227	&namp5zmes ! parameters for mesozooplankton
	228	!-----------------------------------------------------------------------
[12525]	229	part2 = 0.75 ! part of calcite not dissolved in mesozoo guts
	230	grazrat2 = 0.75 ! maximal mesozoo grazing rate
	231	bmetexc2 = .true. ! Metabolic use of excess carbon
	232	resrat2 = 0.005 ! exsudation rate of mesozooplankton
	233	mzrat2 = 0.03 ! mesozooplankton mortality rate
	234	xpref2d = 1. ! meso preference for diatoms
	235	xpref2n = 0.3 ! meso preference for nano
	236	xpref2z = 1. ! meso preference for zoo
	237	xpref2m = 0.1 ! meso preference for zoo
	238	xpref2c = 0.3 ! meso preference for poc
	239	xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton
	240	xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton
	241	xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton
	242	xthresh2mes = 1E-8 ! meso feeding threshold for mesozooplankton
	243	xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton
	244	xthresh2 = 3E-7 ! Food threshold for grazing
	245	xkgraz2 = 20.E-6 ! half sturation constant for meso grazing
	246	epsher2 = 0.5 ! Efficicency of Mesozoo growth
	247	epsher2min = 0.5 ! Minimum efficiency of mesozoo growth
	248	ssigma2 = 0.5 ! Fraction excreted as semi-labile DOM
	249	srespir2 = 0.2 ! Active respiration
	250	unass2c = 0.3 ! non assimilated fraction of C by mesozoo
	251	unass2n = 0.3 ! non assimilated fraction of N by mesozoo
	252	unass2p = 0.3 ! non assimilated fraction of P by mesozoo
	253	grazflux = 3.e3 ! flux-feeding rate
	254	ln_dvm_meso = .false. ! Activates DVM for mesozooplankton
	255	xfracmig = 0.3 ! Fraction of mesozooplankton performing DVM
[7646]	256	/
	257	!-----------------------------------------------------------------------
[9356]	258	&namp4zzoo ! parameters for microzooplankton for PISCES std - ln_p4z
[7646]	259	!-----------------------------------------------------------------------
	260	part = 0.5 ! part of calcite not dissolved in microzoo guts
[3875]	261	grazrat = 3.0 ! maximal zoo grazing rate
[4529]	262	resrat = 0.03 ! exsudation rate of zooplankton
[3875]	263	mzrat = 0.004 ! zooplankton mortality rate
[10363]	264	xprefc = 0.1 ! Microzoo preference for POM
	265	xprefn = 1. ! Microzoo preference for Nanophyto
	266	xprefd = 0.6 ! Microzoo preference for Diatoms
[3875]	267	xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton
	268	xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton
	269	xthreshpoc = 1.E-8 ! POC feeding threshold for microzooplankton
	270	xthresh = 3.E-7 ! Food threshold for feeding
	271	xkgraz = 20.E-6 ! half sturation constant for grazing
[4529]	272	epsher = 0.3 ! Efficiency of microzoo growth
[10363]	273	epshermin = 0.3 ! Minimum efficiency of microzoo growth
[3875]	274	sigma1 = 0.6 ! Fraction of microzoo excretion as DOM
	275	unass = 0.3 ! non assimilated fraction of phyto by zoo
	276	/
[7646]	277	!-----------------------------------------------------------------------
	278	&namp5zzoo ! parameters for microzooplankton
	279	!-----------------------------------------------------------------------
	280	part = 0.5 ! part of calcite not dissolved in microzoo gutsa
[12348]	281	grazrat = 3.0 ! maximal zoo grazing rate
[7646]	282	bmetexc = .true. ! Metabolic use of excess carbon
	283	resrat = 0.03 ! exsudation rate of zooplankton
[12348]	284	mzrat = 0.004 ! zooplankton mortality rate
[7646]	285	xprefc = 0.1 ! Microzoo preference for POM
[12348]	286	xprefn = 1.0 ! Microzoo preference for Nanophyto
	287	xprefp = 1.0 ! Microzoo preference for picophyto
	288	xprefd = 0.8 ! Microzoo preference for Diatoms
	289	xprefz = 0.1 ! Microzoo preference for microzooplankton
[7646]	290	xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton
	291	xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton
[12525]	292	xthreshpic = 1.E-8 ! Picophyto feeding threshold for microzooplankton
	293	xthreshzoo = 1.E-8 ! Microzoo feeding threshold for microzooplankton
[7646]	294	xthreshpoc = 1.E-8 ! POC feeding threshold for microzooplankton
	295	xthresh = 3.E-7 ! Food threshold for feeding
[12525]	296	xkgraz = 20.E-6 ! half saturation constant for grazing
[7646]	297	epsher = 0.5 ! Efficiency of microzoo growth
[12348]	298	epshermin = 0.5 ! Minimum efficiency of microzoo growth
[7646]	299	ssigma = 0.5 ! Fraction excreted as semi-labile DOM
	300	srespir = 0.2 ! Active respiration
	301	unassc = 0.3 ! non assimilated fraction of C by zoo
[12525]	302	unassn = 0.3 ! non assimilated fraction of N by zoo
	303	unassp = 0.3 ! non assimilated fraction of P by zoo
[7646]	304	/
	305	!-----------------------------------------------------------------------
[3875]	306	&nampisfer ! parameters for iron chemistry
[7646]	307	!-----------------------------------------------------------------------
[12525]	308	ln_ligvar = .false. ! variable ligand concentration
	309	xlam1 = 0.005 ! scavenging rate of Iron by biogenic particles
	310	xlamdust = 150.0 ! Scavenging rate of Iron by dust
[10401]	311	ligand = 0.7E-9 ! Ligands concentration
	312	kfep = 0.01 ! Nanoparticle formation rate constant
[7646]	313	/
	314	!-----------------------------------------------------------------------
[3875]	315	&nampisrem ! parameters for remineralization
[7646]	316	!-----------------------------------------------------------------------
[5148]	317	xremik = 0.3 ! remineralization rate of DOC
[3875]	318	nitrif = 0.05 ! NH4 nitrification rate
	319	xsirem = 0.003 ! remineralization rate of Si
	320	xsiremlab = 0.03 ! fast remineralization rate of Si
	321	xsilab = 0.5 ! Fraction of labile biogenic silica
[7646]	322	feratb = 10.E-6 ! Fe/C quota in bacteria
[10375]	323	xkferb = 3E-10 ! Half-saturation constant for bacteria Fe/C
[7646]	324	! ! ln_p5z
	325	xremikc = 0.25 ! remineralization rate of DOC
[12348]	326	xremikn = 0.3 ! remineralization rate of DON
[7646]	327	xremikp = 0.4 ! remineralization rate of DOP
[12525]	328	! feratb = 20E-6 ! Bacterial Fe/C ratio
[7646]	329	! xkferb = 3E-10 ! Half-saturation constant for bact. Fe/C
[3875]	330	/
[7646]	331	!-----------------------------------------------------------------------
	332	&nampispoc ! parameters for organic particles
	333	!-----------------------------------------------------------------------
[12525]	334	xremip = 0.035 ! remineralisation rate of POC
[7646]	335	jcpoc = 15 ! Number of lability classes
	336	rshape = 1.0 ! Shape of the gamma function
	337	! ! ln_p5z
[12348]	338	xremipc = 0.028 ! remineralisation rate of POC
	339	xremipn = 0.03 ! remineralisation rate of PON
	340	xremipp = 0.035 ! remineralisation rate of POP
[7646]	341	/
	342	!-----------------------------------------------------------------------
[3875]	343	&nampiscal ! parameters for Calcite chemistry
[7646]	344	!-----------------------------------------------------------------------
[3875]	345	kdca = 6. ! calcite dissolution rate constant (1/time)
	346	nca = 1. ! order of dissolution reaction (dimensionless)
	347	/
[7646]	348	!-----------------------------------------------------------------------
[3875]	349	&nampissbc ! parameters for inputs deposition
[7646]	350	!-----------------------------------------------------------------------
[4329]	351	! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
	352	! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
[11536]	353	sn_dust = 'dust.orca' , -1. , 'dust' , .true. , .true. , 'yearly' , '' , '' , ''
	354	sn_solub = 'solubility.orca' , -12. , 'solubility1' , .false. , .true. , 'yearly' , '' , '' , ''
	355	sn_riverdic = 'river.orca' , 120. , 'riverdic' , .true. , .true. , 'yearly' , '' , '' , ''
	356	sn_riverdoc = 'river.orca' , 120. , 'riverdoc' , .true. , .true. , 'yearly' , '' , '' , ''
	357	sn_riverdin = 'river.orca' , 120. , 'riverdin' , .true. , .true. , 'yearly' , '' , '' , ''
	358	sn_riverdon = 'river.orca' , 120. , 'riverdon' , .true. , .true. , 'yearly' , '' , '' , ''
	359	sn_riverdip = 'river.orca' , 120. , 'riverdip' , .true. , .true. , 'yearly' , '' , '' , ''
	360	sn_riverdop = 'river.orca' , 120. , 'riverdop' , .true. , .true. , 'yearly' , '' , '' , ''
	361	sn_riverdsi = 'river.orca' , 120. , 'riverdsi' , .true. , .true. , 'yearly' , '' , '' , ''
	362	sn_ndepo = 'ndeposition.orca', -12. , 'ndep' , .false. , .true. , 'yearly' , '' , '' , ''
	363	sn_ironsed = 'bathy.orca' , -12. , 'bathy' , .false. , .true. , 'yearly' , '' , '' , ''
	364	sn_hydrofe = 'hydrofe.orca' , -12. , 'epsdb' , .false. , .true. , 'yearly' , '' , '' , ''
[3875]	365	!
	366	cn_dir = './' ! root directory for the location of the dynamical files
	367	ln_dust = .true. ! boolean for dust input from the atmosphere
	368	ln_solub = .true. ! boolean for variable solubility of atm. Iron
	369	ln_river = .true. ! boolean for river input of nutrients
	370	ln_ndepo = .true. ! boolean for atmospheric deposition of N
	371	ln_ironsed = .true. ! boolean for Fe input from sediments
	372	ln_ironice = .true. ! boolean for Fe input from sea ice
[10375]	373	ln_hydrofe = .true. ! boolean for from hydrothermal vents
[4529]	374	sedfeinput = 2.e-9 ! Coastal release of Iron
[10111]	375	distcoast = 5.e3 ! Distance off the coast for Iron from sediments
[4529]	376	dustsolub = 0.02 ! Solubility of the dusta
	377	mfrac = 0.035 ! Fe mineral fraction of dust
[3875]	378	wdust = 2.0 ! Dust sinking speed
	379	icefeinput = 15.e-9 ! Iron concentration in sea ice
	380	nitrfix = 1.e-7 ! Nitrogen fixation rate
	381	diazolight = 50. ! Diazotrophs sensitivity to light (W/m2)
	382	concfediaz = 1.e-10 ! Diazotrophs half-saturation Cste for Iron
[4529]	383	hratio = 1.e+7 ! Fe to 3He ratio assumed for vent iron supply
[7646]	384	! ! ln_ligand
	385	lgw_rath = 0.5 ! Weak ligand ratio from sed hydro sources
[3875]	386	/
[7646]	387	!-----------------------------------------------------------------------
[9356]	388	&nampislig ! Namelist parameters for ligands, nampislig
[7646]	389	!-----------------------------------------------------------------------
[12525]	390	rlgw = 200. ! Lifetime (years) of weak ligands
[7646]	391	rlig = 1.E-4 ! Remin ligand production per unit C
[12525]	392	prlgw = 5.E-4 ! Photolysis of weak ligand
[10363]	393	rlgs = 1. ! Lifetime (years) of strong ligands
[12525]	394	xklig = 1.E-9 ! 1/2 saturation constant of photolysis
[7646]	395	/
	396	!-----------------------------------------------------------------------
[9356]	397	&nampisice ! Prescribed sea ice tracers
[7646]	398	!-----------------------------------------------------------------------
[9356]	399	!========================================================================
	400	! constant ocean tracer concentrations are defined in trcice_pisces.F90
	401	! (Global, Arctic, Antarctic and Baltic)
	402	! trc_ice_ratio : >=0 & <=1 => prescribed ice/ocean tracer concentration ratio
	403	! : = -1 => the ice-ocean tracer concentration ratio
	404	! follows the ice-ocean salinity ratio
	405	! : = -2 => tracer concentration in sea ice is prescribed
	406	! and trc_ice_prescr is used
	407	! trc_ice_prescr : prescribed tracer concentration. used only if
	408	! trc_ice_ratio = -2. equals -99 if not used.
	409	! cn_trc_o : = 'GL' => use global ocean values making the Baltic
	410	! distinction only
	411	! : = 'AA' => use specific Arctic/Antarctic/Baltic values
	412	!========================================================================
[5385]	413	! sn_tri_ ! trc_ice_ratio ! trc_ice_prescr ! cn_trc_o
	414	sn_tri_dic = -1., -99., 'AA'
	415	sn_tri_doc = 0., -99., 'AA'
	416	sn_tri_tal = -1., -99., 'AA'
	417	sn_tri_oxy = -1., -99., 'AA'
	418	sn_tri_cal = 0., -99., 'AA'
	419	sn_tri_po4 = -1., -99., 'AA'
	420	sn_tri_poc = 0., -99., 'AA'
	421	sn_tri_goc = 0., -99., 'AA'
	422	sn_tri_bfe = 0., -99., 'AA'
	423	sn_tri_num = 0., -99., 'AA'
	424	sn_tri_sil = -1., -99., 'AA'
	425	sn_tri_dsi = 0., -99., 'AA'
	426	sn_tri_gsi = 0., -99., 'AA'
	427	sn_tri_phy = 0., -99., 'AA'
	428	sn_tri_dia = 0., -99., 'AA'
	429	sn_tri_zoo = 0., -99., 'AA'
	430	sn_tri_mes = 0., -99., 'AA'
	431	sn_tri_fer = -2., 15E-9, 'AA'
	432	sn_tri_sfe = 0., -99., 'AA'
	433	sn_tri_dfe = 0., -99., 'AA'
	434	sn_tri_nfe = 0., -99., 'AA'
	435	sn_tri_nch = 0., -99., 'AA'
	436	sn_tri_dch = 0., -99., 'AA'
	437	sn_tri_no3 = -1., -99., 'AA'
	438	sn_tri_nh4 = 1., -99., 'AA'
	439	/
[7646]	440	!-----------------------------------------------------------------------
[9356]	441	&nampisdmp ! Damping
[7646]	442	!-----------------------------------------------------------------------
[9356]	443	ln_pisdmp = .true. ! Relaxation for some tracers to a mean value
[3875]	444	nn_pisdmp = 5475 ! Frequency of Relaxation
	445	/
[7646]	446	!-----------------------------------------------------------------------
[9356]	447	&nampismass ! Mass conservation
[7646]	448	!-----------------------------------------------------------------------
[3875]	449	ln_check_mass = .false. ! Check mass conservation
	450	/
	451	!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
	452	!! PISCES reduced (key_pisces_reduced, ex LOBSTER) : namelists
	453	!! 1 - biological parameters for phytoplankton (namlobphy)
	454	!! 2 - biological parameters for nutrients (namlobnut)
	455	!! 3 - biological parameters for zooplankton (namlobzoo)
	456	!! 4 - biological parameters for detritus (namlobdet)
	457	!! 5 - biological parameters for DOM (namlobdom)
	458	!! 6 - parameters from aphotic layers to sediment (namlobsed)
	459	!! 7 - general coefficients (namlobrat)
	460	!! 8 - optical parameters (namlobopt)
	461	!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
[7646]	462	!-----------------------------------------------------------------------
[3875]	463	&namlobphy ! biological parameters for phytoplankton
[7646]	464	!-----------------------------------------------------------------------
[3875]	465	tmumax = 1.21e-5 ! maximal phytoplankton growth rate [s-1]
	466	rgamma = 0.05 ! phytoplankton exudation fraction [%]
	467	fphylab = 0.75 ! NH4 fraction of phytoplankton exsudation
	468	tmminp = 5.8e-7 ! minimal phytoplancton mortality rate [0.05/86400 s-1=20 days]
	469	aki = 33. ! light photosynthesis half saturation constant[W/m2]
	470	/
[7646]	471	!-----------------------------------------------------------------------
[3875]	472	&namlobnut ! biological parameters for nutrients
[7646]	473	!-----------------------------------------------------------------------
[3875]	474	akno3 = 0.7 ! nitrate limitation half-saturation value [mmol/m3]
	475	aknh4 = 0.001 ! ammonium limitation half-saturation value [mmol/m3]
	476	taunn = 5.80e-7 ! nitrification rate [s-1]
	477	psinut = 3. ! inhibition of nitrate uptake by ammonium
	478	/
[7646]	479	!-----------------------------------------------------------------------
[3875]	480	&namlobzoo ! biological parameters for zooplankton
[7646]	481	!-----------------------------------------------------------------------
[3875]	482	rppz = 0.8 ! zooplankton nominal preference for phytoplancton food [%]
	483	taus = 9.26E-6 ! specific zooplankton maximal grazing rate [s-1]
	484	! ! 0.75/86400 s-1=8.680555E-6 1/86400 = 1.15e-5
	485	aks = 1. ! half-saturation constant for total zooplankton grazing [mmolN.m-3]
	486	rpnaz = 0.3 ! non-assimilated phytoplankton by zooplancton [%]
	487	rdnaz = 0.3 ! non-assimilated detritus by zooplankton [%]
	488	tauzn = 8.1e-7 ! zooplancton specific excretion rate [0.1/86400 s-1=10 days]
	489	fzoolab = 0.5 ! NH4 fraction of zooplankton excretion
	490	fdbod = 0.5 ! zooplankton mortality fraction that goes to detritus
	491	tmminz = 2.31e-6 ! minimal zooplankton mortality rate [(mmolN/m3)-1 d-1]
	492	/
[7646]	493	!-----------------------------------------------------------------------
[3875]	494	&namlobdet ! biological parameters for detritus
[7646]	495	!-----------------------------------------------------------------------
[3875]	496	taudn = 5.80e-7 ! detritus breakdown rate [0.1/86400 s-1=10 days]
	497	fdetlab = 0. ! NH4 fraction of detritus dissolution
	498	/
[7646]	499	!-----------------------------------------------------------------------
[3875]	500	&namlobdom ! biological parameters for DOM
[7646]	501	!-----------------------------------------------------------------------
[3875]	502	taudomn = 6.43e-8 ! DOM breakdown rate [s-1]
	503	! ! slow remineralization rate of semi-labile dom to nh4 (1 month)
	504	/
[7646]	505	!-----------------------------------------------------------------------
[3875]	506	&namlobsed ! parameters from aphotic layers to sediment
[7646]	507	!-----------------------------------------------------------------------
[3875]	508	sedlam = 3.86e-7 ! time coefficient of POC remineralization in sediments [s-1]
	509	sedlostpoc = 0. ! mass of POC lost in sediments
	510	vsed = 3.47e-5 ! detritus sedimentation speed [m/s]
	511	xhr = -0.858 ! coeff for martin''s remineralisation profile
	512	/
[7646]	513	!-----------------------------------------------------------------------
[3875]	514	&namlobrat ! general coefficients
[7646]	515	!-----------------------------------------------------------------------
[3875]	516	rcchl = 60. ! Carbone/Chlorophyl ratio [mgC.mgChla-1]
	517	redf = 6.56 ! redfield ratio (C:N) for phyto
	518	reddom = 6.56 ! redfield ratio (C:N) for DOM
	519	/
[7646]	520	!-----------------------------------------------------------------------
[3875]	521	&namlobopt ! optical parameters
[7646]	522	!-----------------------------------------------------------------------
[3875]	523	xkg0 = 0.0232 ! green absorption coefficient of water
	524	xkr0 = 0.225 ! red absorption coefficent of water
	525	xkgp = 0.074 ! green absorption coefficient of chl
	526	xkrp = 0.037 ! red absorption coefficient of chl
	527	xlg = 0.674 ! green chl exposant for absorption
	528	xlr = 0.629 ! red chl exposant for absorption
	529	rpig = 0.7 ! chla/chla+pheo ratio
	530	/

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