New URL for NEMO forge! http://forge.nemo-ocean.eu

Since March 2022 along with NEMO 4.2 release, the code development moved to a self-hosted GitLab.
This present forge is now archived and remained online for history.

iom.F90 in NEMO/branches/2019/dev_r11943_MERGE_2019/src/OCE/IOM – NEMO

Context Navigation

source: NEMO/branches/2019/dev_r11943_MERGE_2019/src/OCE/IOM/iom.F90 @ 12252

Last change on this file since 12252 was 12252, checked in by smasson, 4 years ago
rev12240_dev_r11943_MERGE_2019: same as [12251], merge trunk 12072:12248, all sette tests ok, GYRE_PISCES, AMM12, ISOMIP, VORTEX intentical to 12236
Property svn:keywords set to `Id`
File size: 129.5 KB

Rev	Line
[544]	1	MODULE iom
[9019]	2	!!======================================================================
[544]	3	!! * MODULE iom *
	4	!! Input/Output manager : Library to read input files
[9019]	5	!!======================================================================
[3764]	6	!! History : 2.0 ! 2005-12 (J. Belier) Original code
	7	!! 2.0 ! 2006-02 (S. Masson) Adaptation to NEMO
	8	!! 3.0 ! 2007-07 (D. Storkey) Changes to iom_gettime
	9	!! 3.4 ! 2012-12 (R. Bourdalle-Badie and G. Reffray) add C1D case
[6140]	10	!! 3.6 ! 2014-15 DIMG format removed
[7646]	11	!! 3.6 ! 2015-15 (J. Harle) Added procedure to read REAL attributes
[9019]	12	!! 4.0 ! 2017-11 (M. Andrejczuk) Extend IOM interface to write any 3D fields
	13	!!----------------------------------------------------------------------
[544]	14
[9019]	15	!!----------------------------------------------------------------------
[544]	16	!! iom_open : open a file read only
	17	!! iom_close : close a file or all files opened by iom
	18	!! iom_get : read a field (interfaced to several routines)
	19	!! iom_varid : get the id of a variable in a file
	20	!! iom_rstput : write a field in a restart file (interfaced to several routines)
[9019]	21	!!----------------------------------------------------------------------
[544]	22	USE dom_oce ! ocean space and time domain
[3764]	23	USE c1d ! 1D vertical configuration
[3294]	24	USE flo_oce ! floats module declarations
[679]	25	USE lbclnk ! lateal boundary condition / mpp exchanges
[544]	26	USE iom_def ! iom variables definitions
	27	USE iom_nf90 ! NetCDF format with native NetCDF library
[2715]	28	USE in_out_manager ! I/O manager
	29	USE lib_mpp ! MPP library
[1412]	30	#if defined key_iomput
[12182]	31	USE sbc_oce , ONLY : nn_fsbc, ght_abl, ghw_abl, e3t_abl, e3w_abl, jpka, jpkam1
[9019]	32	USE icb_oce , ONLY : nclasses, class_num ! !: iceberg classes
[9570]	33	#if defined key_si3
[9019]	34	USE ice , ONLY : jpl
[4691]	35	#endif
[1725]	36	USE domngb ! ocean space and time domain
	37	USE phycst ! physical constants
	38	USE dianam ! build name of file
[3695]	39	USE xios
[1359]	40	# endif
[4148]	41	USE ioipsl, ONLY : ju2ymds ! for calendar
[4152]	42	USE crs ! Grid coarsening
[10222]	43	#if defined key_top
	44	USE trc, ONLY : profsed
	45	#endif
[9367]	46	USE lib_fortran
[11949]	47	USE diu_bulk, ONLY : ln_diurnal_only, ln_diurnal
[1359]	48
[544]	49	IMPLICIT NONE
[556]	50	PUBLIC ! must be public to be able to access iom_def through iom
[550]	51
[1457]	52	#if defined key_iomput
[1725]	53	LOGICAL, PUBLIC, PARAMETER :: lk_iomput = .TRUE. !: iom_put flag
[1457]	54	#else
	55	LOGICAL, PUBLIC, PARAMETER :: lk_iomput = .FALSE. !: iom_put flag
	56	#endif
[12205]	57	PUBLIC iom_init, iom_init_closedef, iom_swap, iom_open, iom_close, iom_setkt, iom_varid, iom_get, iom_get_var
[10522]	58	PUBLIC iom_chkatt, iom_getatt, iom_putatt, iom_getszuld, iom_rstput, iom_delay_rst, iom_put
[12205]	59	PUBLIC iom_use, iom_context_finalize, iom_update_file_name, iom_miss_val
[544]	60
[752]	61	PRIVATE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d
	62	PRIVATE iom_g0d, iom_g1d, iom_g2d, iom_g3d, iom_get_123d
[12193]	63	PRIVATE iom_p1d, iom_p2d, iom_p3d, iom_p4d
[1412]	64	#if defined key_iomput
[4148]	65	PRIVATE iom_set_domain_attr, iom_set_axis_attr, iom_set_field_attr, iom_set_file_attr, iom_get_file_attr, iom_set_grid_attr
[12205]	66	PRIVATE set_grid, set_grid_bounds, set_scalar, set_xmlatt, set_mooring, iom_sdate
[9367]	67	PRIVATE iom_set_rst_context, iom_set_rstw_active, iom_set_rstr_active
[1359]	68	# endif
[9535]	69	PUBLIC iom_set_rstw_var_active, iom_set_rstw_core, iom_set_rst_vars
[752]	70
[544]	71	INTERFACE iom_get
[550]	72	MODULE PROCEDURE iom_g0d, iom_g1d, iom_g2d, iom_g3d
[544]	73	END INTERFACE
[2528]	74	INTERFACE iom_getatt
[10425]	75	MODULE PROCEDURE iom_g0d_iatt, iom_g1d_iatt, iom_g0d_ratt, iom_g1d_ratt, iom_g0d_catt
[2528]	76	END INTERFACE
[7646]	77	INTERFACE iom_putatt
[10425]	78	MODULE PROCEDURE iom_p0d_iatt, iom_p1d_iatt, iom_p0d_ratt, iom_p1d_ratt, iom_p0d_catt
[7646]	79	END INTERFACE
[544]	80	INTERFACE iom_rstput
[550]	81	MODULE PROCEDURE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d
[544]	82	END INTERFACE
[9802]	83	INTERFACE iom_put
[12193]	84	MODULE PROCEDURE iom_p0d, iom_p1d, iom_p2d, iom_p3d, iom_p4d
[9802]	85	END INTERFACE iom_put
	86
[544]	87	!!----------------------------------------------------------------------
[9598]	88	!! NEMO/OCE 4.0 , NEMO Consortium (2018)
[1152]	89	!! $Id$
[10068]	90	!! Software governed by the CeCILL license (see ./LICENSE)
[544]	91	!!----------------------------------------------------------------------
	92	CONTAINS
	93
[12205]	94	SUBROUTINE iom_init( cdname, fname, ld_tmppatch, ld_closedef )
[1359]	95	!!----------------------------------------------------------------------
	96	!! * ROUTINE *
	97	!!
	98	!! ** Purpose :
	99	!!
	100	!!----------------------------------------------------------------------
[9903]	101	CHARACTER(len=*), INTENT(in) :: cdname
[9367]	102	CHARACTER(len=*), OPTIONAL, INTENT(in) :: fname
[9903]	103	LOGICAL , OPTIONAL, INTENT(in) :: ld_tmppatch
[12205]	104	LOGICAL , OPTIONAL, INTENT(in) :: ld_closedef
[1412]	105	#if defined key_iomput
[9019]	106	!
[7646]	107	TYPE(xios_duration) :: dtime = xios_duration(0, 0, 0, 0, 0, 0)
	108	TYPE(xios_date) :: start_date
[9367]	109	CHARACTER(len=lc) :: clname
[12193]	110	INTEGER :: irefyear, irefmonth, irefday
[7646]	111	INTEGER :: ji, jkmin
[9367]	112	LOGICAL :: llrst_context ! is context related to restart
[5415]	113	!
[7646]	114	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: zt_bnds, zw_bnds
[12182]	115	REAL(wp), DIMENSION(2,jpkam1) :: za_bnds ! ABL vertical boundaries
[9903]	116	LOGICAL :: ll_tmppatch = .TRUE. !: seb: patch before we remove periodicity
	117	INTEGER :: nldi_save, nlei_save !: and close boundaries in output files
	118	INTEGER :: nldj_save, nlej_save !:
[12205]	119	LOGICAL :: ll_closedef = .TRUE.
[1359]	120	!!----------------------------------------------------------------------
[9019]	121	!
[9802]	122	! seb: patch before we remove periodicity and close boundaries in output files
[9903]	123	IF( PRESENT(ld_tmppatch) ) THEN ; ll_tmppatch = ld_tmppatch
	124	ELSE ; ll_tmppatch = .TRUE.
	125	ENDIF
	126	IF ( ll_tmppatch ) THEN
[9802]	127	nldi_save = nldi ; nlei_save = nlei
	128	nldj_save = nldj ; nlej_save = nlej
	129	IF( nimpp == 1 ) nldi = 1
	130	IF( nimpp + jpi - 1 == jpiglo ) nlei = jpi
	131	IF( njmpp == 1 ) nldj = 1
	132	IF( njmpp + jpj - 1 == jpjglo ) nlej = jpj
	133	ENDIF
[12205]	134	IF ( PRESENT(ld_closedef) ) ll_closedef = ld_closedef
[9802]	135	!
[7646]	136	ALLOCATE( zt_bnds(2,jpk), zw_bnds(2,jpk) )
[9019]	137	!
[4152]	138	clname = cdname
	139	IF( TRIM(Agrif_CFixed()) /= '0' ) clname = TRIM(Agrif_CFixed())//"_"//TRIM(cdname)
[9570]	140	CALL xios_context_initialize(TRIM(clname), mpi_comm_oce)
[4152]	141	CALL iom_swap( cdname )
[9367]	142	llrst_context = (TRIM(cdname) == TRIM(crxios_context) .OR. TRIM(cdname) == TRIM(cwxios_context))
[1359]	143
[7646]	144	! Calendar type is now defined in xml file
[12193]	145	IF (.NOT.(xios_getvar('ref_year' ,irefyear ))) irefyear = 1900
	146	IF (.NOT.(xios_getvar('ref_month',irefmonth))) irefmonth = 01
	147	IF (.NOT.(xios_getvar('ref_day' ,irefday ))) irefday = 01
	148
[1725]	149	SELECT CASE ( nleapy ) ! Choose calendar for IOIPSL
[12193]	150	CASE ( 1) ; CALL xios_define_calendar( TYPE = "Gregorian", time_origin = xios_date(irefyear,irefmonth,irefday,00,00,00), &
[7646]	151	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
[12193]	152	CASE ( 0) ; CALL xios_define_calendar( TYPE = "NoLeap" , time_origin = xios_date(irefyear,irefmonth,irefday,00,00,00), &
[7646]	153	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
[12193]	154	CASE (30) ; CALL xios_define_calendar( TYPE = "D360" , time_origin = xios_date(irefyear,irefmonth,irefday,00,00,00), &
[7646]	155	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
[1725]	156	END SELECT
[1359]	157
	158	! horizontal grid definition
[9367]	159	IF(.NOT.llrst_context) CALL set_scalar
[9019]	160	!
[5407]	161	IF( TRIM(cdname) == TRIM(cxios_context) ) THEN
[9984]	162	CALL set_grid( "T", glamt, gphit, .FALSE., .FALSE. )
	163	CALL set_grid( "U", glamu, gphiu, .FALSE., .FALSE. )
	164	CALL set_grid( "V", glamv, gphiv, .FALSE., .FALSE. )
	165	CALL set_grid( "W", glamt, gphit, .FALSE., .FALSE. )
[5385]	166	CALL set_grid_znl( gphit )
[5415]	167	!
	168	IF( ln_cfmeta ) THEN ! Add additional grid metadata
[5836]	169	CALL iom_set_domain_attr("grid_T", area = e1e2t(nldi:nlei, nldj:nlej))
	170	CALL iom_set_domain_attr("grid_U", area = e1e2u(nldi:nlei, nldj:nlej))
	171	CALL iom_set_domain_attr("grid_V", area = e1e2v(nldi:nlei, nldj:nlej))
	172	CALL iom_set_domain_attr("grid_W", area = e1e2t(nldi:nlei, nldj:nlej))
[5415]	173	CALL set_grid_bounds( "T", glamf, gphif, glamt, gphit )
	174	CALL set_grid_bounds( "U", glamv, gphiv, glamu, gphiu )
	175	CALL set_grid_bounds( "V", glamu, gphiu, glamv, gphiv )
	176	CALL set_grid_bounds( "W", glamf, gphif, glamt, gphit )
	177	ENDIF
[4152]	178	ENDIF
[9019]	179	!
[5407]	180	IF( TRIM(cdname) == TRIM(cxios_context)//"_crs" ) THEN
[4152]	181	CALL dom_grid_crs ! Save the parent grid information & Switch to coarse grid domain
	182	!
[9984]	183	CALL set_grid( "T", glamt_crs, gphit_crs, .FALSE., .FALSE. )
	184	CALL set_grid( "U", glamu_crs, gphiu_crs, .FALSE., .FALSE. )
	185	CALL set_grid( "V", glamv_crs, gphiv_crs, .FALSE., .FALSE. )
	186	CALL set_grid( "W", glamt_crs, gphit_crs, .FALSE., .FALSE. )
[5385]	187	CALL set_grid_znl( gphit_crs )
[4152]	188	!
	189	CALL dom_grid_glo ! Return to parent grid domain
[5415]	190	!
[9367]	191	IF( ln_cfmeta .AND. .NOT. llrst_context) THEN ! Add additional grid metadata
[5415]	192	CALL iom_set_domain_attr("grid_T", area = e1e2t_crs(nldi:nlei, nldj:nlej))
	193	CALL iom_set_domain_attr("grid_U", area = e1u_crs(nldi:nlei, nldj:nlej) * e2u_crs(nldi:nlei, nldj:nlej))
	194	CALL iom_set_domain_attr("grid_V", area = e1v_crs(nldi:nlei, nldj:nlej) * e2v_crs(nldi:nlei, nldj:nlej))
	195	CALL iom_set_domain_attr("grid_W", area = e1e2t_crs(nldi:nlei, nldj:nlej))
	196	CALL set_grid_bounds( "T", glamf_crs, gphif_crs, glamt_crs, gphit_crs )
	197	CALL set_grid_bounds( "U", glamv_crs, gphiv_crs, glamu_crs, gphiu_crs )
	198	CALL set_grid_bounds( "V", glamu_crs, gphiu_crs, glamv_crs, gphiv_crs )
	199	CALL set_grid_bounds( "W", glamf_crs, gphif_crs, glamt_crs, gphit_crs )
	200	ENDIF
[4152]	201	ENDIF
[9019]	202	!
[1359]	203	! vertical grid definition
[9367]	204	IF(.NOT.llrst_context) THEN
[12182]	205	CALL iom_set_axis_attr( "deptht", paxis = gdept_1d )
	206	CALL iom_set_axis_attr( "depthu", paxis = gdept_1d )
	207	CALL iom_set_axis_attr( "depthv", paxis = gdept_1d )
	208	CALL iom_set_axis_attr( "depthw", paxis = gdepw_1d )
[9367]	209
[12182]	210	! ABL
	211	IF( .NOT. ALLOCATED(ght_abl) ) THEN ! force definition for xml files (xios)
	212	ALLOCATE( ght_abl(jpka), ghw_abl(jpka), e3t_abl(jpka), e3w_abl(jpka) ) ! default allocation needed by iom
	213	ght_abl(:) = -1._wp ; ghw_abl(:) = -1._wp
	214	e3t_abl(:) = -1._wp ; e3w_abl(:) = -1._wp
	215	ENDIF
	216	CALL iom_set_axis_attr( "ght_abl", ght_abl(2:jpka) )
	217	CALL iom_set_axis_attr( "ghw_abl", ghw_abl(2:jpka) )
	218
[9367]	219	! Add vertical grid bounds
	220	jkmin = MIN(2,jpk) ! in case jpk=1 (i.e. sas2D)
	221	zt_bnds(2,: ) = gdept_1d(:)
	222	zt_bnds(1,jkmin:jpk) = gdept_1d(1:jpkm1)
	223	zt_bnds(1,1 ) = gdept_1d(1) - e3w_1d(1)
	224	zw_bnds(1,: ) = gdepw_1d(:)
	225	zw_bnds(2,1:jpkm1 ) = gdepw_1d(jkmin:jpk)
	226	zw_bnds(2,jpk: ) = gdepw_1d(jpk) + e3t_1d(jpk)
[12182]	227	CALL iom_set_axis_attr( "deptht", bounds=zw_bnds )
	228	CALL iom_set_axis_attr( "depthu", bounds=zw_bnds )
	229	CALL iom_set_axis_attr( "depthv", bounds=zw_bnds )
	230	CALL iom_set_axis_attr( "depthw", bounds=zt_bnds )
	231
	232	! ABL
	233	za_bnds(1,:) = ghw_abl(1:jpkam1)
	234	za_bnds(2,:) = ghw_abl(2:jpka )
	235	CALL iom_set_axis_attr( "ght_abl", bounds=za_bnds )
	236	za_bnds(1,:) = ght_abl(2:jpka )
	237	za_bnds(2,:) = ght_abl(2:jpka ) + e3w_abl(2:jpka)
	238	CALL iom_set_axis_attr( "ghw_abl", bounds=za_bnds )
	239
[9580]	240	CALL iom_set_axis_attr( "nfloat", (/ (REAL(ji,wp), ji=1,jpnfl) /) )
[9570]	241	# if defined key_si3
[9367]	242	CALL iom_set_axis_attr( "ncatice", (/ (REAL(ji,wp), ji=1,jpl) /) )
	243	! SIMIP diagnostics (4 main arctic straits)
	244	CALL iom_set_axis_attr( "nstrait", (/ (REAL(ji,wp), ji=1,4) /) )
[9019]	245	# endif
[10222]	246	#if defined key_top
[10817]	247	IF( ALLOCATED(profsed) ) CALL iom_set_axis_attr( "profsed", paxis = profsed )
[10222]	248	#endif
[9367]	249	CALL iom_set_axis_attr( "icbcla", class_num )
[10817]	250	CALL iom_set_axis_attr( "iax_20C", (/ REAL(20,wp) /) ) ! strange syntaxe and idea...
[12193]	251	CALL iom_set_axis_attr( "iax_26C", (/ REAL(26,wp) /) ) ! strange syntaxe and idea...
[10817]	252	CALL iom_set_axis_attr( "iax_28C", (/ REAL(28,wp) /) ) ! strange syntaxe and idea...
[12193]	253	CALL iom_set_axis_attr( "basin" , (/ (REAL(ji,wp), ji=1,5) /) )
[9367]	254	ENDIF
	255	!
[1725]	256	! automatic definitions of some of the xml attributs
[9367]	257	IF( TRIM(cdname) == TRIM(crxios_context) ) THEN
	258	!set names of the fields in restart file IF using XIOS to read data
[9984]	259	CALL iom_set_rst_context(.TRUE.)
[9367]	260	CALL iom_set_rst_vars(rst_rfields)
	261	!set which fields are to be read from restart file
	262	CALL iom_set_rstr_active()
	263	ELSE IF( TRIM(cdname) == TRIM(cwxios_context) ) THEN
	264	!set names of the fields in restart file IF using XIOS to write data
[9984]	265	CALL iom_set_rst_context(.FALSE.)
[9367]	266	CALL iom_set_rst_vars(rst_wfields)
	267	!set which fields are to be written to a restart file
	268	CALL iom_set_rstw_active(fname)
	269	ELSE
	270	CALL set_xmlatt
	271	ENDIF
[9019]	272	!
[12205]	273	! set time step length
[4148]	274	dtime%second = rdt
[9019]	275	CALL xios_set_timestep( dtime )
	276	!
[12205]	277	! conditional closure of context definition
	278	IF ( ll_closedef ) CALL iom_init_closedef
	279	!
[7646]	280	DEALLOCATE( zt_bnds, zw_bnds )
[9019]	281	!
[9903]	282	IF ( ll_tmppatch ) THEN
[9802]	283	nldi = nldi_save ; nlei = nlei_save
	284	nldj = nldj_save ; nlej = nlej_save
	285	ENDIF
[1359]	286	#endif
[9019]	287	!
[1359]	288	END SUBROUTINE iom_init
	289
[12205]	290	SUBROUTINE iom_init_closedef
	291	!!----------------------------------------------------------------------
	292	!! * SUBROUTINE iom_init_closedef *
	293	!!----------------------------------------------------------------------
	294	!!
	295	!! ** Purpose : Closure of context definition
	296	!!
	297	!!----------------------------------------------------------------------
	298
	299	CALL xios_close_context_definition()
	300	CALL xios_update_calendar( 0 )
	301
	302	END SUBROUTINE iom_init_closedef
	303
[9367]	304	SUBROUTINE iom_set_rstw_var_active(field)
	305	!!---------------------------------------------------------------------
	306	!! * SUBROUTINE iom_set_rstw_var_active *
	307	!!
	308	!! ** Purpose : enable variable in restart file when writing with XIOS
	309	!!---------------------------------------------------------------------
	310	CHARACTER(len = *), INTENT(IN) :: field
	311	INTEGER :: i
	312	LOGICAL :: llis_set
[9535]	313	CHARACTER(LEN=256) :: clinfo ! info character
[1359]	314
[9535]	315	#if defined key_iomput
[9367]	316	llis_set = .FALSE.
	317
	318	DO i = 1, max_rst_fields
	319	IF(TRIM(rst_wfields(i)%vname) == field) THEN
	320	rst_wfields(i)%active = .TRUE.
	321	llis_set = .TRUE.
	322	EXIT
	323	ENDIF
	324	ENDDO
	325	!Warn if variable is not in defined in rst_wfields
	326	IF(.NOT.llis_set) THEN
[10425]	327	WRITE(ctmp1,*) 'iom_set_rstw_var_active: variable ', field ,' is available for writing but not defined'
	328	CALL ctl_stop( 'iom_set_rstw_var_active:', ctmp1 )
[9367]	329	ENDIF
[9535]	330	#else
[9536]	331	clinfo = 'iom_set_rstw_var_active: key_iomput is needed to use XIOS restart read/write functionality'
	332	CALL ctl_stop('STOP', TRIM(clinfo))
[9535]	333	#endif
[9367]	334
	335	END SUBROUTINE iom_set_rstw_var_active
	336
	337	SUBROUTINE iom_set_rstr_active()
	338	!!---------------------------------------------------------------------
	339	!! * SUBROUTINE iom_set_rstr_active *
	340	!!
	341	!! ** Purpose : define file name in XIOS context for reading restart file,
	342	!! enable variables present in restart file for reading with XIOS
	343	!!---------------------------------------------------------------------
	344
	345	!sets enabled = .TRUE. for each field in restart file
	346	CHARACTER(len=256) :: rst_file
[9535]	347
	348	#if defined key_iomput
[9367]	349	TYPE(xios_field) :: field_hdl
	350	TYPE(xios_file) :: file_hdl
	351	TYPE(xios_filegroup) :: filegroup_hdl
	352	INTEGER :: i
	353	CHARACTER(lc) :: clpath
	354
	355	clpath = TRIM(cn_ocerst_indir)
	356	IF( clpath(LEN_TRIM(clpath):) /= '/' ) clpath = TRIM(clpath) // '/'
	357	IF( TRIM(Agrif_CFixed()) == '0' ) THEN
	358	rst_file = TRIM(clpath)//TRIM(cn_ocerst_in)
	359	ELSE
	360	rst_file = TRIM(clpath)//'1_'//TRIM(cn_ocerst_in)
	361	ENDIF
	362	!set name of the restart file and enable available fields
	363	if(lwp) WRITE(numout,*) 'Setting restart filename (for XIOS) to: ',rst_file
	364	CALL xios_get_handle("file_definition", filegroup_hdl )
	365	CALL xios_add_child(filegroup_hdl, file_hdl, 'rrestart')
	366	CALL xios_set_file_attr( "rrestart", name=trim(rst_file), type="one_file", &
	367	par_access="collective", enabled=.TRUE., mode="read", &
	368	output_freq=xios_timestep)
	369	!define variables for restart context
	370	DO i = 1, max_rst_fields
	371	IF( TRIM(rst_rfields(i)%vname) /= "NO_NAME") THEN
	372	IF( iom_varid( numror, TRIM(rst_rfields(i)%vname), ldstop = .FALSE. ) > 0 ) THEN
	373	CALL xios_add_child(file_hdl, field_hdl, TRIM(rst_rfields(i)%vname))
	374	SELECT CASE (TRIM(rst_rfields(i)%grid))
	375	CASE ("grid_N_3D")
	376	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	377	domain_ref="grid_N", axis_ref="nav_lev", operation = "instant")
	378	CASE ("grid_N")
	379	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	380	domain_ref="grid_N", operation = "instant")
	381	CASE ("grid_vector")
	382	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	383	axis_ref="nav_lev", operation = "instant")
	384	CASE ("grid_scalar")
	385	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	386	scalar_ref = "grid_scalar", operation = "instant")
	387	END SELECT
	388	IF(lwp) WRITE(numout,*) 'XIOS read: ', TRIM(rst_rfields(i)%vname), ' enabled in ', TRIM(rst_file)
	389	ENDIF
	390	ENDIF
	391	END DO
[9535]	392	#endif
[9367]	393	END SUBROUTINE iom_set_rstr_active
	394
	395	SUBROUTINE iom_set_rstw_core(cdmdl)
	396	!!---------------------------------------------------------------------
	397	!! * SUBROUTINE iom_set_rstw_core *
	398	!!
	399	!! ** Purpose : set variables which are always in restart file
	400	!!---------------------------------------------------------------------
	401	CHARACTER (len=*), INTENT (IN) :: cdmdl ! model OPA or SAS
[9535]	402	CHARACTER(LEN=256) :: clinfo ! info character
	403	#if defined key_iomput
[9367]	404	IF(cdmdl == "OPA") THEN
	405	!from restart.F90
	406	CALL iom_set_rstw_var_active("rdt")
	407	IF ( .NOT. ln_diurnal_only ) THEN
	408	CALL iom_set_rstw_var_active('ub' )
	409	CALL iom_set_rstw_var_active('vb' )
	410	CALL iom_set_rstw_var_active('tb' )
	411	CALL iom_set_rstw_var_active('sb' )
	412	CALL iom_set_rstw_var_active('sshb')
	413	!
	414	CALL iom_set_rstw_var_active('un' )
	415	CALL iom_set_rstw_var_active('vn' )
	416	CALL iom_set_rstw_var_active('tn' )
	417	CALL iom_set_rstw_var_active('sn' )
	418	CALL iom_set_rstw_var_active('sshn')
	419	CALL iom_set_rstw_var_active('rhop')
	420	ENDIF
	421	IF(ln_diurnal) CALL iom_set_rstw_var_active('Dsst')
	422	!from trasbc.F90
	423	CALL iom_set_rstw_var_active('sbc_hc_b')
	424	CALL iom_set_rstw_var_active('sbc_sc_b')
	425	ENDIF
[9535]	426	#else
[9536]	427	clinfo = 'iom_set_rstw_core: key_iomput is needed to use XIOS restart read/write functionality'
	428	CALL ctl_stop('STOP', TRIM(clinfo))
[9535]	429	#endif
[9367]	430	END SUBROUTINE iom_set_rstw_core
	431
	432	SUBROUTINE iom_set_rst_vars(fields)
	433	!!---------------------------------------------------------------------
[9535]	434	!! * SUBROUTINE iom_set_rst_vars *
[9367]	435	!!
	436	!! ** Purpose : Fill array fields with the information about all
	437	!! possible variables and corresponding grids definition
	438	!! for reading/writing restart with XIOS
	439	!!---------------------------------------------------------------------
	440	TYPE(RST_FIELD), INTENT(INOUT) :: fields(max_rst_fields)
[9535]	441	INTEGER :: i
[9367]	442
	443	i = 0
	444	i = i + 1; fields(i)%vname="rdt"; fields(i)%grid="grid_scalar"
	445	i = i + 1; fields(i)%vname="un"; fields(i)%grid="grid_N_3D"
	446	i = i + 1; fields(i)%vname="ub"; fields(i)%grid="grid_N_3D"
	447	i = i + 1; fields(i)%vname="vn"; fields(i)%grid="grid_N_3D"
	448	i = i + 1; fields(i)%vname="vb"; fields(i)%grid="grid_N_3D"
	449	i = i + 1; fields(i)%vname="tn"; fields(i)%grid="grid_N_3D"
	450	i = i + 1; fields(i)%vname="tb"; fields(i)%grid="grid_N_3D"
	451	i = i + 1; fields(i)%vname="sn"; fields(i)%grid="grid_N_3D"
	452	i = i + 1; fields(i)%vname="sb"; fields(i)%grid="grid_N_3D"
	453	i = i + 1; fields(i)%vname="sshn"; fields(i)%grid="grid_N"
	454	i = i + 1; fields(i)%vname="sshb"; fields(i)%grid="grid_N"
	455	i = i + 1; fields(i)%vname="rhop"; fields(i)%grid="grid_N_3D"
	456	i = i + 1; fields(i)%vname="kt"; fields(i)%grid="grid_scalar"
	457	i = i + 1; fields(i)%vname="ndastp"; fields(i)%grid="grid_scalar"
	458	i = i + 1; fields(i)%vname="adatrj"; fields(i)%grid="grid_scalar"
	459	i = i + 1; fields(i)%vname="utau_b"; fields(i)%grid="grid_N"
	460	i = i + 1; fields(i)%vname="vtau_b"; fields(i)%grid="grid_N"
	461	i = i + 1; fields(i)%vname="qns_b"; fields(i)%grid="grid_N"
	462	i = i + 1; fields(i)%vname="emp_b"; fields(i)%grid="grid_N"
	463	i = i + 1; fields(i)%vname="sfx_b"; fields(i)%grid="grid_N"
	464	i = i + 1; fields(i)%vname="en" ; fields(i)%grid="grid_N_3D"
	465	i = i + 1; fields(i)%vname="avt_k"; fields(i)%grid="grid_N_3D"
	466	i = i + 1; fields(i)%vname="avm_k"; fields(i)%grid="grid_N_3D"
	467	i = i + 1; fields(i)%vname="dissl"; fields(i)%grid="grid_N_3D"
	468	i = i + 1; fields(i)%vname="sbc_hc_b"; fields(i)%grid="grid_N"
	469	i = i + 1; fields(i)%vname="sbc_sc_b"; fields(i)%grid="grid_N"
	470	i = i + 1; fields(i)%vname="qsr_hc_b"; fields(i)%grid="grid_N_3D"
	471	i = i + 1; fields(i)%vname="fraqsr_1lev"; fields(i)%grid="grid_N"
	472	i = i + 1; fields(i)%vname="greenland_icesheet_mass"
	473	fields(i)%grid="grid_scalar"
	474	i = i + 1; fields(i)%vname="greenland_icesheet_timelapsed"
	475	fields(i)%grid="grid_scalar"
	476	i = i + 1; fields(i)%vname="greenland_icesheet_mass_roc"
	477	fields(i)%grid="grid_scalar"
	478	i = i + 1; fields(i)%vname="antarctica_icesheet_mass"
	479	fields(i)%grid="grid_scalar"
	480	i = i + 1; fields(i)%vname="antarctica_icesheet_timelapsed"
	481	fields(i)%grid="grid_scalar"
	482	i = i + 1; fields(i)%vname="antarctica_icesheet_mass_roc"
	483	fields(i)%grid="grid_scalar"
	484	i = i + 1; fields(i)%vname="frc_v"; fields(i)%grid="grid_scalar"
	485	i = i + 1; fields(i)%vname="frc_t"; fields(i)%grid="grid_scalar"
	486	i = i + 1; fields(i)%vname="frc_s"; fields(i)%grid="grid_scalar"
	487	i = i + 1; fields(i)%vname="frc_wn_t"; fields(i)%grid="grid_scalar"
	488	i = i + 1; fields(i)%vname="frc_wn_s"; fields(i)%grid="grid_scalar"
	489	i = i + 1; fields(i)%vname="ssh_ini"; fields(i)%grid="grid_N"
	490	i = i + 1; fields(i)%vname="e3t_ini"; fields(i)%grid="grid_N_3D"
	491	i = i + 1; fields(i)%vname="hc_loc_ini"; fields(i)%grid="grid_N_3D"
	492	i = i + 1; fields(i)%vname="sc_loc_ini"; fields(i)%grid="grid_N_3D"
	493	i = i + 1; fields(i)%vname="ssh_hc_loc_ini"; fields(i)%grid="grid_N"
	494	i = i + 1; fields(i)%vname="ssh_sc_loc_ini"; fields(i)%grid="grid_N"
	495	i = i + 1; fields(i)%vname="tilde_e3t_b"; fields(i)%grid="grid_N"
	496	i = i + 1; fields(i)%vname="tilde_e3t_n"; fields(i)%grid="grid_N"
	497	i = i + 1; fields(i)%vname="hdiv_lf"; fields(i)%grid="grid_N"
	498	i = i + 1; fields(i)%vname="ub2_b"; fields(i)%grid="grid_N"
	499	i = i + 1; fields(i)%vname="vb2_b"; fields(i)%grid="grid_N"
	500	i = i + 1; fields(i)%vname="sshbb_e"; fields(i)%grid="grid_N"
	501	i = i + 1; fields(i)%vname="ubb_e"; fields(i)%grid="grid_N"
	502	i = i + 1; fields(i)%vname="vbb_e"; fields(i)%grid="grid_N"
	503	i = i + 1; fields(i)%vname="sshb_e"; fields(i)%grid="grid_N"
	504	i = i + 1; fields(i)%vname="ub_e"; fields(i)%grid="grid_N"
	505	i = i + 1; fields(i)%vname="vb_e"; fields(i)%grid="grid_N"
	506	i = i + 1; fields(i)%vname="fwf_isf_b"; fields(i)%grid="grid_N"
	507	i = i + 1; fields(i)%vname="isf_sc_b"; fields(i)%grid="grid_N"
	508	i = i + 1; fields(i)%vname="isf_hc_b"; fields(i)%grid="grid_N"
	509	i = i + 1; fields(i)%vname="ssh_ibb"; fields(i)%grid="grid_N"
	510	i = i + 1; fields(i)%vname="rnf_b"; fields(i)%grid="grid_N"
	511	i = i + 1; fields(i)%vname="rnf_hc_b"; fields(i)%grid="grid_N"
	512	i = i + 1; fields(i)%vname="rnf_sc_b"; fields(i)%grid="grid_N"
	513	i = i + 1; fields(i)%vname="nn_fsbc"; fields(i)%grid="grid_scalar"
	514	i = i + 1; fields(i)%vname="ssu_m"; fields(i)%grid="grid_N"
	515	i = i + 1; fields(i)%vname="ssv_m"; fields(i)%grid="grid_N"
	516	i = i + 1; fields(i)%vname="sst_m"; fields(i)%grid="grid_N"
	517	i = i + 1; fields(i)%vname="sss_m"; fields(i)%grid="grid_N"
	518	i = i + 1; fields(i)%vname="ssh_m"; fields(i)%grid="grid_N"
	519	i = i + 1; fields(i)%vname="e3t_m"; fields(i)%grid="grid_N"
	520	i = i + 1; fields(i)%vname="frq_m"; fields(i)%grid="grid_N"
	521	i = i + 1; fields(i)%vname="avmb"; fields(i)%grid="grid_vector"
	522	i = i + 1; fields(i)%vname="avtb"; fields(i)%grid="grid_vector"
	523	i = i + 1; fields(i)%vname="ub2_i_b"; fields(i)%grid="grid_N"
	524	i = i + 1; fields(i)%vname="vb2_i_b"; fields(i)%grid="grid_N"
	525	i = i + 1; fields(i)%vname="ntime"; fields(i)%grid="grid_scalar"
	526	i = i + 1; fields(i)%vname="Dsst"; fields(i)%grid="grid_scalar"
	527	i = i + 1; fields(i)%vname="tmask"; fields(i)%grid="grid_N_3D"
	528	i = i + 1; fields(i)%vname="umask"; fields(i)%grid="grid_N_3D"
	529	i = i + 1; fields(i)%vname="vmask"; fields(i)%grid="grid_N_3D"
	530	i = i + 1; fields(i)%vname="smask"; fields(i)%grid="grid_N_3D"
	531	i = i + 1; fields(i)%vname="gdepw_n"; fields(i)%grid="grid_N_3D"
	532	i = i + 1; fields(i)%vname="e3t_n"; fields(i)%grid="grid_N_3D"
	533	i = i + 1; fields(i)%vname="e3u_n"; fields(i)%grid="grid_N_3D"
	534	i = i + 1; fields(i)%vname="e3v_n"; fields(i)%grid="grid_N_3D"
	535	i = i + 1; fields(i)%vname="surf_ini"; fields(i)%grid="grid_N"
	536	i = i + 1; fields(i)%vname="e3t_b"; fields(i)%grid="grid_N_3D"
	537	i = i + 1; fields(i)%vname="hmxl_n"; fields(i)%grid="grid_N_3D"
	538	i = i + 1; fields(i)%vname="un_bf"; fields(i)%grid="grid_N"
	539	i = i + 1; fields(i)%vname="vn_bf"; fields(i)%grid="grid_N"
	540	i = i + 1; fields(i)%vname="hbl"; fields(i)%grid="grid_N"
	541	i = i + 1; fields(i)%vname="hbli"; fields(i)%grid="grid_N"
	542	i = i + 1; fields(i)%vname="wn"; fields(i)%grid="grid_N_3D"
	543
	544	IF( i-1 > max_rst_fields) THEN
[10425]	545	WRITE(ctmp1,*) 'E R R O R : iom_set_rst_vars SIZE of RST_FIELD array is too small'
	546	CALL ctl_stop( 'iom_set_rst_vars:', ctmp1 )
[9367]	547	ENDIF
	548	END SUBROUTINE iom_set_rst_vars
	549
	550
	551	SUBROUTINE iom_set_rstw_active(cdrst_file)
	552	!!---------------------------------------------------------------------
[9535]	553	!! * SUBROUTINE iom_set_rstw_active *
[9367]	554	!!
	555	!! ** Purpose : define file name in XIOS context for writing restart
	556	!! enable variables present in restart file for writing
	557	!!---------------------------------------------------------------------
	558	!sets enabled = .TRUE. for each field in restart file
	559	CHARACTER(len=*) :: cdrst_file
	560	#if defined key_iomput
	561	TYPE(xios_field) :: field_hdl
	562	TYPE(xios_file) :: file_hdl
	563	TYPE(xios_filegroup) :: filegroup_hdl
	564	INTEGER :: i
	565	CHARACTER(lc) :: clpath
	566
	567	!set name of the restart file and enable available fields
	568	IF(lwp) WRITE(numout,*) 'Setting restart filename (for XIOS write) to: ',cdrst_file
	569	CALL xios_get_handle("file_definition", filegroup_hdl )
	570	CALL xios_add_child(filegroup_hdl, file_hdl, 'wrestart')
	571	IF(nxioso.eq.1) THEN
	572	CALL xios_set_file_attr( "wrestart", type="one_file", enabled=.TRUE.,&
	573	mode="write", output_freq=xios_timestep)
	574	if(lwp) write(numout,*) 'OPEN ', trim(cdrst_file), ' in one_file mode'
	575	ELSE
	576	CALL xios_set_file_attr( "wrestart", type="multiple_file", enabled=.TRUE.,&
	577	mode="write", output_freq=xios_timestep)
	578	if(lwp) write(numout,*) 'OPEN ', trim(cdrst_file), ' in multiple_file mode'
	579	ENDIF
	580	CALL xios_set_file_attr( "wrestart", name=trim(cdrst_file))
	581	!define fields for restart context
	582	DO i = 1, max_rst_fields
	583	IF( rst_wfields(i)%active ) THEN
	584	CALL xios_add_child(file_hdl, field_hdl, TRIM(rst_wfields(i)%vname))
	585	SELECT CASE (TRIM(rst_wfields(i)%grid))
	586	CASE ("grid_N_3D")
	587	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	588	domain_ref="grid_N", axis_ref="nav_lev", prec = 8, operation = "instant")
	589	CASE ("grid_N")
	590	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	591	domain_ref="grid_N", prec = 8, operation = "instant")
	592	CASE ("grid_vector")
	593	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	594	axis_ref="nav_lev", prec = 8, operation = "instant")
	595	CASE ("grid_scalar")
	596	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	597	scalar_ref = "grid_scalar", prec = 8, operation = "instant")
	598	END SELECT
	599	ENDIF
	600	END DO
	601	#endif
	602	END SUBROUTINE iom_set_rstw_active
	603
[9984]	604	SUBROUTINE iom_set_rst_context(ld_rstr)
[9367]	605	!!---------------------------------------------------------------------
[9535]	606	!! * SUBROUTINE iom_set_rst_context *
[9367]	607	!!
	608	!! ** Purpose : Define domain, axis and grid for restart (read/write)
	609	!! context
	610	!!
	611	!!---------------------------------------------------------------------
[9984]	612	LOGICAL, INTENT(IN) :: ld_rstr
	613	!ld_rstr is true for restart context. There is no need to define grid for
	614	!restart read, because it's read from file
[9367]	615	#if defined key_iomput
	616	TYPE(xios_domaingroup) :: domaingroup_hdl
	617	TYPE(xios_domain) :: domain_hdl
	618	TYPE(xios_axisgroup) :: axisgroup_hdl
	619	TYPE(xios_axis) :: axis_hdl
	620	TYPE(xios_scalar) :: scalar_hdl
	621	TYPE(xios_scalargroup) :: scalargroup_hdl
	622
	623	CALL xios_get_handle("domain_definition",domaingroup_hdl)
	624	CALL xios_add_child(domaingroup_hdl, domain_hdl, "grid_N")
[9984]	625	CALL set_grid("N", glamt, gphit, .TRUE., ld_rstr)
[9367]	626
	627	CALL xios_get_handle("axis_definition",axisgroup_hdl)
	628	CALL xios_add_child(axisgroup_hdl, axis_hdl, "nav_lev")
	629	!AGRIF fails to compile when unit= is in call to xios_set_axis_attr
	630	! CALL xios_set_axis_attr( "nav_lev", long_name="Vertical levels", unit="m", positive="down")
	631	CALL xios_set_axis_attr( "nav_lev", long_name="Vertical levels in meters", positive="down")
	632	CALL iom_set_axis_attr( "nav_lev", paxis = gdept_1d )
	633
	634	CALL xios_get_handle("scalar_definition", scalargroup_hdl)
	635	CALL xios_add_child(scalargroup_hdl, scalar_hdl, "grid_scalar")
	636	#endif
	637	END SUBROUTINE iom_set_rst_context
	638
[4152]	639	SUBROUTINE iom_swap( cdname )
[1793]	640	!!---------------------------------------------------------------------
	641	!! * SUBROUTINE iom_swap *
	642	!!
	643	!! ** Purpose : swap context between different agrif grid for xmlio_server
	644	!!---------------------------------------------------------------------
[4152]	645	CHARACTER(len=*), INTENT(in) :: cdname
[1793]	646	#if defined key_iomput
[3695]	647	TYPE(xios_context) :: nemo_hdl
[1793]	648
[4152]	649	IF( TRIM(Agrif_CFixed()) == '0' ) THEN
	650	CALL xios_get_handle(TRIM(cdname),nemo_hdl)
	651	ELSE
	652	CALL xios_get_handle(TRIM(Agrif_CFixed())//"_"//TRIM(cdname),nemo_hdl)
	653	ENDIF
	654	!
	655	CALL xios_set_current_context(nemo_hdl)
[1793]	656	#endif
[4152]	657	!
[1793]	658	END SUBROUTINE iom_swap
	659
	660
[10425]	661	SUBROUTINE iom_open( cdname, kiomid, ldwrt, kdom, ldstop, ldiof, kdlev )
[544]	662	!!---------------------------------------------------------------------
	663	!! * SUBROUTINE iom_open *
	664	!!
	665	!! ** Purpose : open an input file (return 0 if not found)
	666	!!---------------------------------------------------------------------
	667	CHARACTER(len=*), INTENT(in ) :: cdname ! File name
	668	INTEGER , INTENT( out) :: kiomid ! iom identifier of the opened file
	669	LOGICAL , INTENT(in ), OPTIONAL :: ldwrt ! open in write modeb (default = .FALSE.)
	670	INTEGER , INTENT(in ), OPTIONAL :: kdom ! Type of domain to be written (default = jpdom_local_noovlap)
[679]	671	LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if open to read a non-existing file (default = .TRUE.)
[1319]	672	LOGICAL , INTENT(in ), OPTIONAL :: ldiof ! Interp On the Fly, needed for AGRIF (default = .FALSE.)
[9019]	673	INTEGER , INTENT(in ), OPTIONAL :: kdlev ! number of vertical levels
	674	!
[4148]	675	CHARACTER(LEN=256) :: clname ! the name of the file based on cdname [[+clcpu]+clcpu]
	676	CHARACTER(LEN=256) :: cltmpn ! tempory name to store clname (in writting mode)
[6140]	677	CHARACTER(LEN=10) :: clsuffix ! ".nc"
[550]	678	CHARACTER(LEN=15) :: clcpu ! the cpu number (max jpmax_digits digits)
[4148]	679	CHARACTER(LEN=256) :: clinfo ! info character
[544]	680	LOGICAL :: llok ! check the existence
[679]	681	LOGICAL :: llwrt ! local definition of ldwrt
[1200]	682	LOGICAL :: llnoov ! local definition to read overlap
[679]	683	LOGICAL :: llstop ! local definition of ldstop
[1319]	684	LOGICAL :: lliof ! local definition of ldiof
[544]	685	INTEGER :: icnt ! counter for digits in clcpu (max = jpmax_digits)
	686	INTEGER :: iln, ils ! lengths of character
	687	INTEGER :: idom ! type of domain
	688	INTEGER :: istop !
	689	INTEGER, DIMENSION(2,5) :: idompar ! domain parameters:
	690	! local number of points for x,y dimensions
	691	! position of first local point for x,y dimensions
	692	! position of last local point for x,y dimensions
	693	! start halo size for x,y dimensions
	694	! end halo size for x,y dimensions
	695	!---------------------------------------------------------------------
	696	! Initializations and control
	697	! =============
[1341]	698	kiomid = -1
[544]	699	clinfo = ' iom_open ~~~ '
	700	istop = nstop
	701	! if iom_open is called for the first time: initialize iom_file(:)%nfid to 0
	702	! (could be done when defining iom_file in f95 but not in f90)
[1441]	703	IF( Agrif_Root() ) THEN
	704	IF( iom_open_init == 0 ) THEN
	705	iom_file(:)%nfid = 0
	706	iom_open_init = 1
	707	ENDIF
[1409]	708	ENDIF
[544]	709	! do we read or write the file?
	710	IF( PRESENT(ldwrt) ) THEN ; llwrt = ldwrt
	711	ELSE ; llwrt = .FALSE.
	712	ENDIF
[679]	713	! do we call ctl_stop if we try to open a non-existing file in read mode?
	714	IF( PRESENT(ldstop) ) THEN ; llstop = ldstop
	715	ELSE ; llstop = .TRUE.
	716	ENDIF
[1319]	717	! are we using interpolation on the fly?
	718	IF( PRESENT(ldiof) ) THEN ; lliof = ldiof
	719	ELSE ; lliof = .FALSE.
	720	ENDIF
[1200]	721	! do we read the overlap
	722	! ugly patch SM+JMM+RB to overwrite global definition in some cases
[10016]	723	llnoov = (jpni * jpnj ) == jpnij .AND. .NOT. lk_agrif
[544]	724	! create the file name by added, if needed, TRIM(Agrif_CFixed()) and TRIM(clsuffix)
	725	! =============
	726	clname = trim(cdname)
[1319]	727	IF ( .NOT. Agrif_Root() .AND. .NOT. lliof ) THEN
[12182]	728	iln = INDEX(clname,'/')
[1200]	729	cltmpn = clname(1:iln)
	730	clname = clname(iln+1:LEN_TRIM(clname))
	731	clname=TRIM(cltmpn)//TRIM(Agrif_CFixed())//'_'//TRIM(clname)
	732	ENDIF
[544]	733	! which suffix should we use?
[10425]	734	clsuffix = '.nc'
[544]	735	! Add the suffix if needed
	736	iln = LEN_TRIM(clname)
	737	ils = LEN_TRIM(clsuffix)
[742]	738	IF( iln <= ils .OR. INDEX( TRIM(clname), TRIM(clsuffix), back = .TRUE. ) /= iln - ils + 1 ) &
	739	& clname = TRIM(clname)//TRIM(clsuffix)
[544]	740	cltmpn = clname ! store this name
	741	! try to find if the file to be opened already exist
	742	! =============
	743	INQUIRE( FILE = clname, EXIST = llok )
	744	IF( .NOT.llok ) THEN
	745	! we try to add the cpu number to the name
[6140]	746	WRITE(clcpu,*) narea-1
	747
[544]	748	clcpu = TRIM(ADJUSTL(clcpu))
[679]	749	iln = INDEX(clname,TRIM(clsuffix), back = .TRUE.)
[544]	750	clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix)
	751	icnt = 0
	752	INQUIRE( FILE = clname, EXIST = llok )
	753	! we try different formats for the cpu number by adding 0
	754	DO WHILE( .NOT.llok .AND. icnt < jpmax_digits )
	755	clcpu = "0"//trim(clcpu)
	756	clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix)
	757	INQUIRE( FILE = clname, EXIST = llok )
	758	icnt = icnt + 1
	759	END DO
[9367]	760	ELSE
	761	lxios_sini = .TRUE.
[544]	762	ENDIF
[679]	763	IF( llwrt ) THEN
	764	! check the domain definition
	765	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	766	! idom = jpdom_local_noovlap ! default definition
[1200]	767	IF( llnoov ) THEN ; idom = jpdom_local_noovlap ! default definition
	768	ELSE ; idom = jpdom_local_full ! default definition
[679]	769	ENDIF
	770	IF( PRESENT(kdom) ) idom = kdom
	771	! create the domain informations
	772	! =============
	773	SELECT CASE (idom)
	774	CASE (jpdom_local_full)
	775	idompar(:,1) = (/ jpi , jpj /)
	776	idompar(:,2) = (/ nimpp , njmpp /)
	777	idompar(:,3) = (/ nimpp + jpi - 1 , njmpp + jpj - 1 /)
	778	idompar(:,4) = (/ nldi - 1 , nldj - 1 /)
	779	idompar(:,5) = (/ jpi - nlei , jpj - nlej /)
	780	CASE (jpdom_local_noextra)
	781	idompar(:,1) = (/ nlci , nlcj /)
	782	idompar(:,2) = (/ nimpp , njmpp /)
	783	idompar(:,3) = (/ nimpp + nlci - 1, njmpp + nlcj - 1 /)
	784	idompar(:,4) = (/ nldi - 1 , nldj - 1 /)
	785	idompar(:,5) = (/ nlci - nlei , nlcj - nlej /)
	786	CASE (jpdom_local_noovlap)
	787	idompar(:,1) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
	788	idompar(:,2) = (/ nimpp + nldi - 1, njmpp + nldj - 1 /)
	789	idompar(:,3) = (/ nimpp + nlei - 1, njmpp + nlej - 1 /)
	790	idompar(:,4) = (/ 0 , 0 /)
	791	idompar(:,5) = (/ 0 , 0 /)
	792	CASE DEFAULT
	793	CALL ctl_stop( TRIM(clinfo), 'wrong value of kdom, only jpdom_local* cases are accepted' )
	794	END SELECT
	795	ENDIF
[6140]	796	! Open the NetCDF file
[544]	797	! =============
	798	! do we have some free file identifier?
	799	IF( MINVAL(iom_file(:)%nfid) /= 0 ) &
[679]	800	& CALL ctl_stop( TRIM(clinfo), 'No more free file identifier', 'increase jpmax_files in iom_def' )
	801	! if no file was found...
	802	IF( .NOT. llok ) THEN
	803	IF( .NOT. llwrt ) THEN ! we are in read mode
	804	IF( llstop ) THEN ; CALL ctl_stop( TRIM(clinfo), 'File '//TRIM(cltmpn)//'* not found' )
	805	ELSE ; istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file
	806	ENDIF
	807	ELSE ! we are in write mode so we
	808	clname = cltmpn ! get back the file name without the cpu number
	809	ENDIF
[2586]	810	ELSE
	811	IF( llwrt .AND. .NOT. ln_clobber ) THEN ! we stop as we want to write in a new file
	812	CALL ctl_stop( TRIM(clinfo), 'We want to write in a new file but '//TRIM(clname)//' already exists...' )
	813	istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file
[4650]	814	ELSEIF( llwrt ) THEN ! the file exists and we are in write mode with permission to
	815	clname = cltmpn ! overwrite so get back the file name without the cpu number
[2586]	816	ENDIF
[679]	817	ENDIF
[544]	818	IF( istop == nstop ) THEN ! no error within this routine
[10425]	819	CALL iom_nf90_open( clname, kiomid, llwrt, llok, idompar, kdlev = kdlev )
[544]	820	ENDIF
	821	!
	822	END SUBROUTINE iom_open
	823
	824
	825	SUBROUTINE iom_close( kiomid )
	826	!!--------------------------------------------------------------------
	827	!! * SUBROUTINE iom_close *
	828	!!
	829	!! ** Purpose : close an input file, or all files opened by iom
	830	!!--------------------------------------------------------------------
[1131]	831	INTEGER, INTENT(inout), OPTIONAL :: kiomid ! iom identifier of the file to be closed
	832	! ! return 0 when file is properly closed
	833	! ! No argument: all files opened by iom are closed
[544]	834
	835	INTEGER :: jf ! dummy loop indices
	836	INTEGER :: i_s, i_e ! temporary integer
	837	CHARACTER(LEN=100) :: clinfo ! info character
	838	!---------------------------------------------------------------------
	839	!
[12252]	840	IF( iom_open_init == 0 ) RETURN ! avoid to use iom_file(jf)%nfid that us not yet initialized
	841	!
[544]	842	clinfo = ' iom_close ~~~ '
	843	IF( PRESENT(kiomid) ) THEN
	844	i_s = kiomid
	845	i_e = kiomid
	846	ELSE
	847	i_s = 1
	848	i_e = jpmax_files
	849	ENDIF
	850
	851	IF( i_s > 0 ) THEN
	852	DO jf = i_s, i_e
	853	IF( iom_file(jf)%nfid > 0 ) THEN
[10425]	854	CALL iom_nf90_close( jf )
[1131]	855	iom_file(jf)%nfid = 0 ! free the id
	856	IF( PRESENT(kiomid) ) kiomid = 0 ! return 0 as id to specify that the file was closed
[679]	857	IF(lwp) WRITE(numout,*) TRIM(clinfo)//' close file: '//TRIM(iom_file(jf)%name)//' ok'
[544]	858	ELSEIF( PRESENT(kiomid) ) THEN
	859	WRITE(ctmp1,*) '--->', kiomid
	860	CALL ctl_stop( TRIM(clinfo)//' Invalid file identifier', ctmp1 )
	861	ENDIF
	862	END DO
	863	ENDIF
	864	!
	865	END SUBROUTINE iom_close
	866
	867
[11536]	868	FUNCTION iom_varid ( kiomid, cdvar, kdimsz, kndims, lduld, ldstop )
[544]	869	!!-----------------------------------------------------------------------
	870	!! * FUNCTION iom_varid *
	871	!!
	872	!! ** Purpose : get the id of a variable in a file (return 0 if not found)
	873	!!-----------------------------------------------------------------------
	874	INTEGER , INTENT(in ) :: kiomid ! file Identifier
	875	CHARACTER(len=*) , INTENT(in ) :: cdvar ! name of the variable
[9540]	876	INTEGER, DIMENSION(:), INTENT( out), OPTIONAL :: kdimsz ! size of each dimension
[11536]	877	INTEGER , INTENT( out), OPTIONAL :: kndims ! number of dimensions
	878	LOGICAL , INTENT( out), OPTIONAL :: lduld ! true if the last dimension is unlimited (time)
[745]	879	LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if looking for non-existing variable (default = .TRUE.)
[544]	880	!
	881	INTEGER :: iom_varid, iiv, i_nvd
	882	LOGICAL :: ll_fnd
	883	CHARACTER(LEN=100) :: clinfo ! info character
[745]	884	LOGICAL :: llstop ! local definition of ldstop
[544]	885	!!-----------------------------------------------------------------------
	886	iom_varid = 0 ! default definition
[745]	887	! do we call ctl_stop if we look for non-existing variable?
	888	IF( PRESENT(ldstop) ) THEN ; llstop = ldstop
	889	ELSE ; llstop = .TRUE.
	890	ENDIF
[544]	891	!
	892	IF( kiomid > 0 ) THEN
[679]	893	clinfo = 'iom_varid, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(cdvar)
[544]	894	IF( iom_file(kiomid)%nfid == 0 ) THEN
	895	CALL ctl_stop( trim(clinfo), 'the file is not open' )
	896	ELSE
	897	ll_fnd = .FALSE.
	898	iiv = 0
	899	!
	900	DO WHILE ( .NOT.ll_fnd .AND. iiv < iom_file(kiomid)%nvars )
	901	iiv = iiv + 1
	902	ll_fnd = ( TRIM(cdvar) == TRIM(iom_file(kiomid)%cn_var(iiv)) )
	903	END DO
	904	!
	905	IF( .NOT.ll_fnd ) THEN
	906	iiv = iiv + 1
	907	IF( iiv <= jpmax_vars ) THEN
[11536]	908	iom_varid = iom_nf90_varid( kiomid, cdvar, iiv, kdimsz, kndims, lduld )
[544]	909	ELSE
	910	CALL ctl_stop( trim(clinfo), 'Too many variables in the file '//iom_file(kiomid)%name, &
[10425]	911	& 'increase the parameter jpmax_vars')
[544]	912	ENDIF
[745]	913	IF( llstop .AND. iom_varid == -1 ) CALL ctl_stop( TRIM(clinfo)//' not found' )
[544]	914	ELSE
	915	iom_varid = iiv
	916	IF( PRESENT(kdimsz) ) THEN
	917	i_nvd = iom_file(kiomid)%ndims(iiv)
[9540]	918	IF( i_nvd <= size(kdimsz) ) THEN
	919	kdimsz(1:i_nvd) = iom_file(kiomid)%dimsz(1:i_nvd,iiv)
[544]	920	ELSE
	921	WRITE(ctmp1,*) i_nvd, size(kdimsz)
	922	CALL ctl_stop( trim(clinfo), 'error in kdimsz size'//trim(ctmp1) )
	923	ENDIF
	924	ENDIF
[4205]	925	IF( PRESENT(kndims) ) kndims = iom_file(kiomid)%ndims(iiv)
[11536]	926	IF( PRESENT( lduld) ) lduld = iom_file(kiomid)%luld( iiv)
[544]	927	ENDIF
	928	ENDIF
	929	ENDIF
	930	!
	931	END FUNCTION iom_varid
	932
	933
	934	!!----------------------------------------------------------------------
	935	!! INTERFACE iom_get
	936	!!----------------------------------------------------------------------
[9367]	937	SUBROUTINE iom_g0d( kiomid, cdvar, pvar, ktime, ldxios )
[544]	938	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	939	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	940	REAL(wp) , INTENT( out) :: pvar ! read field
[4245]	941	INTEGER , INTENT(in ), OPTIONAL :: ktime ! record number
[9367]	942	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! use xios to read restart
[544]	943	!
[4245]	944	INTEGER :: idvar ! variable id
	945	INTEGER :: idmspc ! number of spatial dimensions
	946	INTEGER , DIMENSION(1) :: itime ! record number
	947	CHARACTER(LEN=100) :: clinfo ! info character
	948	CHARACTER(LEN=100) :: clname ! file name
	949	CHARACTER(LEN=1) :: cldmspc !
[9367]	950	LOGICAL :: llxios
[544]	951	!
[9367]	952	llxios = .FALSE.
	953	IF( PRESENT(ldxios) ) llxios = ldxios
	954
	955	IF(.NOT.llxios) THEN ! read data using default library
	956	itime = 1
	957	IF( PRESENT(ktime) ) itime = ktime
	958	!
	959	clname = iom_file(kiomid)%name
	960	clinfo = ' iom_g0d, file: '//trim(clname)//', var: '//trim(cdvar)
	961	!
	962	IF( kiomid > 0 ) THEN
	963	idvar = iom_varid( kiomid, cdvar )
	964	IF( iom_file(kiomid)%nfid > 0 .AND. idvar > 0 ) THEN
	965	idmspc = iom_file ( kiomid )%ndims( idvar )
	966	IF( iom_file(kiomid)%luld(idvar) ) idmspc = idmspc - 1
	967	WRITE(cldmspc , fmt='(i1)') idmspc
	968	IF( idmspc > 0 ) CALL ctl_stop( TRIM(clinfo), 'When reading to a 0D array, we do not accept data', &
	969	& 'with 1 or more spatial dimensions: '//cldmspc//' were found.' , &
	970	& 'Use ncwa -a to suppress the unnecessary dimensions' )
[10425]	971	CALL iom_nf90_get( kiomid, idvar, pvar, itime )
[9367]	972	ENDIF
[679]	973	ENDIF
[9367]	974	ELSE
[9535]	975	#if defined key_iomput
[9367]	976	IF(lwp) WRITE(numout,*) 'XIOS RST READ (0D): ', trim(cdvar)
	977	CALL iom_swap( TRIM(crxios_context) )
	978	CALL xios_recv_field( trim(cdvar), pvar)
	979	CALL iom_swap( TRIM(cxios_context) )
[9535]	980	#else
[10425]	981	WRITE(ctmp1,*) 'Can not use XIOS in iom_g0d, file: '//trim(clname)//', var:'//trim(cdvar)
	982	CALL ctl_stop( 'iom_g0d', ctmp1 )
[9535]	983	#endif
[679]	984	ENDIF
[550]	985	END SUBROUTINE iom_g0d
[544]	986
[9367]	987	SUBROUTINE iom_g1d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, ldxios )
[544]	988	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	989	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	990	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	991	REAL(wp) , INTENT( out), DIMENSION(:) :: pvar ! read field
	992	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	993	INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kstart ! start axis position of the reading
	994	INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kcount ! number of points in each axis
[9367]	995	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	996	!
[679]	997	IF( kiomid > 0 ) THEN
	998	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r1d=pvar, &
[9367]	999	& ktime=ktime, kstart=kstart, kcount=kcount, &
	1000	& ldxios=ldxios )
[679]	1001	ENDIF
[550]	1002	END SUBROUTINE iom_g1d
[544]	1003
[9367]	1004	SUBROUTINE iom_g2d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, lrowattr, ldxios)
[544]	1005	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1006	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1007	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	1008	REAL(wp) , INTENT( out), DIMENSION(:,:) :: pvar ! read field
	1009	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	1010	INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kstart ! start axis position of the reading
	1011	INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kcount ! number of points in each axis
[5118]	1012	LOGICAL , INTENT(in ) , OPTIONAL :: lrowattr ! logical flag telling iom_get to
	1013	! look for and use a file attribute
	1014	! called open_ocean_jstart to set the start
	1015	! value for the 2nd dimension (netcdf only)
[9367]	1016	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	1017	!
[679]	1018	IF( kiomid > 0 ) THEN
	1019	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r2d=pvar, &
[5118]	1020	& ktime=ktime, kstart=kstart, kcount=kcount, &
[9367]	1021	& lrowattr=lrowattr, ldxios=ldxios)
[679]	1022	ENDIF
[550]	1023	END SUBROUTINE iom_g2d
[544]	1024
[9367]	1025	SUBROUTINE iom_g3d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, lrowattr, ldxios )
[544]	1026	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1027	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1028	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	1029	REAL(wp) , INTENT( out), DIMENSION(:,:,:) :: pvar ! read field
	1030	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	1031	INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kstart ! start axis position of the reading
	1032	INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kcount ! number of points in each axis
[5118]	1033	LOGICAL , INTENT(in ) , OPTIONAL :: lrowattr ! logical flag telling iom_get to
	1034	! look for and use a file attribute
	1035	! called open_ocean_jstart to set the start
	1036	! value for the 2nd dimension (netcdf only)
[9367]	1037	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	1038	!
[679]	1039	IF( kiomid > 0 ) THEN
	1040	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r3d=pvar, &
[5118]	1041	& ktime=ktime, kstart=kstart, kcount=kcount, &
[9367]	1042	& lrowattr=lrowattr, ldxios=ldxios )
[679]	1043	ENDIF
[550]	1044	END SUBROUTINE iom_g3d
[544]	1045	!!----------------------------------------------------------------------
	1046
	1047	SUBROUTINE iom_get_123d( kiomid, kdom , cdvar , &
[679]	1048	& pv_r1d, pv_r2d, pv_r3d, &
[5118]	1049	& ktime , kstart, kcount, &
[9367]	1050	& lrowattr, ldxios )
[544]	1051	!!-----------------------------------------------------------------------
	1052	!! * ROUTINE iom_get_123d *
	1053	!!
	1054	!! ** Purpose : read a 1D/2D/3D variable
	1055	!!
	1056	!! ** Method : read ONE record at each CALL
	1057	!!-----------------------------------------------------------------------
	1058	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1059	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1060	CHARACTER(len=*) , INTENT(in ) :: cdvar ! Name of the variable
	1061	REAL(wp), DIMENSION(:) , INTENT( out), OPTIONAL :: pv_r1d ! read field (1D case)
	1062	REAL(wp), DIMENSION(:,:) , INTENT( out), OPTIONAL :: pv_r2d ! read field (2D case)
	1063	REAL(wp), DIMENSION(:,:,:) , INTENT( out), OPTIONAL :: pv_r3d ! read field (3D case)
	1064	INTEGER , INTENT(in ), OPTIONAL :: ktime ! record number
	1065	INTEGER , DIMENSION(:) , INTENT(in ), OPTIONAL :: kstart ! start position of the reading in each axis
	1066	INTEGER , DIMENSION(:) , INTENT(in ), OPTIONAL :: kcount ! number of points to be read in each axis
[5118]	1067	LOGICAL , INTENT(in ), OPTIONAL :: lrowattr ! logical flag telling iom_get to
[9367]	1068	! look for and use a file attribute
	1069	! called open_ocean_jstart to set the start
	1070	! value for the 2nd dimension (netcdf only)
	1071	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! use XIOS to read restart
[544]	1072	!
[9367]	1073	LOGICAL :: llxios ! local definition for XIOS read
[1200]	1074	LOGICAL :: llnoov ! local definition to read overlap
[5118]	1075	LOGICAL :: luse_jattr ! local definition to read open_ocean_jstart file attribute
	1076	INTEGER :: jstartrow ! start point for 2nd dimension optionally set by file attribute
[544]	1077	INTEGER :: jl ! loop on number of dimension
	1078	INTEGER :: idom ! type of domain
	1079	INTEGER :: idvar ! id of the variable
	1080	INTEGER :: inbdim ! number of dimensions of the variable
	1081	INTEGER :: idmspc ! number of spatial dimensions
	1082	INTEGER :: itime ! record number
	1083	INTEGER :: istop ! temporary value of nstop
[679]	1084	INTEGER :: ix1, ix2, iy1, iy2 ! subdomain indexes
	1085	INTEGER :: ji, jj ! loop counters
[5118]	1086	INTEGER :: irankpv !
[679]	1087	INTEGER :: ind1, ind2 ! substring index
[544]	1088	INTEGER, DIMENSION(jpmax_dims) :: istart ! starting point to read for each axis
	1089	INTEGER, DIMENSION(jpmax_dims) :: icnt ! number of value to read along each axis
	1090	INTEGER, DIMENSION(jpmax_dims) :: idimsz ! size of the dimensions of the variable
[679]	1091	INTEGER, DIMENSION(jpmax_dims) :: ishape ! size of the dimensions of the variable
[544]	1092	REAL(wp) :: zscf, zofs ! sacle_factor and add_offset
	1093	INTEGER :: itmp ! temporary integer
[4148]	1094	CHARACTER(LEN=256) :: clinfo ! info character
	1095	CHARACTER(LEN=256) :: clname ! file name
[679]	1096	CHARACTER(LEN=1) :: clrankpv, cldmspc !
[6140]	1097	LOGICAL :: ll_depth_spec ! T => if kstart, kcount present then only use values for 3rd spatial dimension.
[9019]	1098	INTEGER :: inlev ! number of levels for 3D data
[9367]	1099	REAL(wp) :: gma, gmi
[544]	1100	!---------------------------------------------------------------------
	1101	!
[9019]	1102	inlev = -1
	1103	IF( PRESENT(pv_r3d) ) inlev = SIZE(pv_r3d, 3)
[9367]	1104	!
	1105	llxios = .FALSE.
	1106	if(PRESENT(ldxios)) llxios = ldxios
	1107	idvar = iom_varid( kiomid, cdvar )
[544]	1108	idom = kdom
[9367]	1109	!
	1110	IF(.NOT.llxios) THEN
	1111	clname = iom_file(kiomid)%name ! esier to read
	1112	clinfo = ' iom_get_123d, file: '//trim(clname)//', var: '//trim(cdvar)
	1113	! local definition of the domain ?
	1114	! do we read the overlap
	1115	! ugly patch SM+JMM+RB to overwrite global definition in some cases
	1116	llnoov = (jpni * jpnj ) == jpnij .AND. .NOT. lk_agrif
	1117	! check kcount and kstart optionals parameters...
	1118	IF( PRESENT(kcount) .AND. (.NOT. PRESENT(kstart)) ) CALL ctl_stop(trim(clinfo), 'kcount present needs kstart present')
	1119	IF( PRESENT(kstart) .AND. (.NOT. PRESENT(kcount)) ) CALL ctl_stop(trim(clinfo), 'kstart present needs kcount present')
	1120	IF( PRESENT(kstart) .AND. idom /= jpdom_unknown .AND. idom /= jpdom_autoglo_xy ) &
	1121	& CALL ctl_stop(trim(clinfo), 'kstart present needs kdom = jpdom_unknown or kdom = jpdom_autoglo_xy')
[544]	1122
[9367]	1123	luse_jattr = .false.
	1124	IF( PRESENT(lrowattr) ) THEN
	1125	IF( lrowattr .AND. idom /= jpdom_data ) CALL ctl_stop(trim(clinfo), 'lrowattr present and true needs kdom = jpdom_data')
	1126	IF( lrowattr .AND. idom == jpdom_data ) luse_jattr = .true.
[6140]	1127	ENDIF
[679]	1128
[9367]	1129	! Search for the variable in the data base (eventually actualize data)
	1130	istop = nstop
[544]	1131	!
[9367]	1132	IF( idvar > 0 ) THEN
	1133	! to write iom_file(kiomid)%dimsz in a shorter way !
	1134	idimsz(:) = iom_file(kiomid)%dimsz(:, idvar)
	1135	inbdim = iom_file(kiomid)%ndims(idvar) ! number of dimensions in the file
	1136	idmspc = inbdim ! number of spatial dimensions in the file
	1137	IF( iom_file(kiomid)%luld(idvar) ) idmspc = inbdim - 1
	1138	IF( idmspc > 3 ) CALL ctl_stop(trim(clinfo), 'the file has more than 3 spatial dimensions this case is not coded...')
	1139	!
	1140	! update idom definition...
	1141	! Identify the domain in case of jpdom_auto(glo/dta) definition
	1142	IF( idom == jpdom_autoglo_xy ) THEN
	1143	ll_depth_spec = .TRUE.
	1144	idom = jpdom_autoglo
	1145	ELSE
	1146	ll_depth_spec = .FALSE.
	1147	ENDIF
	1148	IF( idom == jpdom_autoglo .OR. idom == jpdom_autodta ) THEN
	1149	IF( idom == jpdom_autoglo ) THEN ; idom = jpdom_global
	1150	ELSE ; idom = jpdom_data
[544]	1151	ENDIF
[9367]	1152	ind1 = INDEX( clname, '_', back = .TRUE. ) + 1
	1153	ind2 = INDEX( clname, '.', back = .TRUE. ) - 1
	1154	IF( ind2 > ind1 ) THEN ; IF( VERIFY( clname(ind1:ind2), '0123456789' ) == 0 ) idom = jpdom_local ; ENDIF
	1155	ENDIF
	1156	! Identify the domain in case of jpdom_local definition
	1157	IF( idom == jpdom_local ) THEN
	1158	IF( idimsz(1) == jpi .AND. idimsz(2) == jpj ) THEN ; idom = jpdom_local_full
	1159	ELSEIF( idimsz(1) == nlci .AND. idimsz(2) == nlcj ) THEN ; idom = jpdom_local_noextra
	1160	ELSEIF( idimsz(1) == (nlei - nldi + 1) .AND. idimsz(2) == (nlej - nldj + 1) ) THEN ; idom = jpdom_local_noovlap
	1161	ELSE ; CALL ctl_stop( trim(clinfo), 'impossible to identify the local domain' )
	1162	ENDIF
	1163	ENDIF
	1164	!
	1165	! check the consistency between input array and data rank in the file
	1166	!
	1167	! initializations
	1168	itime = 1
	1169	IF( PRESENT(ktime) ) itime = ktime
	1170	!
	1171	irankpv = 1 * COUNT( (/PRESENT(pv_r1d)/) ) + 2 * COUNT( (/PRESENT(pv_r2d)/) ) + 3 * COUNT( (/PRESENT(pv_r3d)/) )
	1172	WRITE(clrankpv, fmt='(i1)') irankpv
	1173	WRITE(cldmspc , fmt='(i1)') idmspc
	1174	!
[12182]	1175	!!GS: we consider 2D data as 3D data with vertical dim size = 1
	1176	!IF( idmspc < irankpv ) THEN
	1177	! CALL ctl_stop( TRIM(clinfo), 'The file has only '//cldmspc//' spatial dimension', &
	1178	! & 'it is impossible to read a '//clrankpv//'D array from this file...' )
	1179	!ELSEIF( idmspc == irankpv ) THEN
	1180	IF( idmspc == irankpv ) THEN
[9367]	1181	IF( PRESENT(pv_r1d) .AND. idom /= jpdom_unknown ) &
	1182	& CALL ctl_stop( TRIM(clinfo), 'case not coded...You must use jpdom_unknown' )
	1183	ELSEIF( idmspc > irankpv ) THEN
	1184	IF( PRESENT(pv_r2d) .AND. itime == 1 .AND. idimsz(3) == 1 .AND. idmspc == 3 ) THEN
	1185	CALL ctl_warn( trim(clinfo), '2D array but 3 spatial dimensions for the data...' , &
	1186	& 'As the size of the z dimension is 1 and as we try to read the first record, ', &
	1187	& 'we accept this case, even if there is a possible mix-up between z and time dimension' )
	1188	idmspc = idmspc - 1
	1189	ELSE
	1190	CALL ctl_stop( TRIM(clinfo), 'To keep iom lisibility, when reading a '//clrankpv//'D array,' , &
	1191	& 'we do not accept data with '//cldmspc//' spatial dimensions', &
	1192	& 'Use ncwa -a to suppress the unnecessary dimensions' )
	1193	ENDIF
	1194	ENDIF
	1195	!
	1196	! definition of istart and icnt
	1197	!
	1198	icnt (:) = 1
	1199	istart(:) = 1
	1200	istart(idmspc+1) = itime
	1201
	1202	IF( PRESENT(kstart) .AND. .NOT. ll_depth_spec ) THEN
	1203	istart(1:idmspc) = kstart(1:idmspc)
	1204	icnt (1:idmspc) = kcount(1:idmspc)
	1205	ELSE
	1206	IF(idom == jpdom_unknown ) THEN
	1207	icnt(1:idmspc) = idimsz(1:idmspc)
	1208	ELSE
	1209	IF( .NOT. PRESENT(pv_r1d) ) THEN ! not a 1D array
	1210	IF( idom == jpdom_data ) THEN
	1211	jstartrow = 1
	1212	IF( luse_jattr ) THEN
	1213	CALL iom_getatt(kiomid, 'open_ocean_jstart', jstartrow ) ! -999 is returned if the attribute is not found
	1214	jstartrow = MAX(1,jstartrow)
	1215	ENDIF
	1216	istart(1:2) = (/ mig(1), mjg(1) + jstartrow - 1 /) ! icnt(1:2) done below
	1217	ELSEIF( idom == jpdom_global ) THEN ; istart(1:2) = (/ nimpp , njmpp /) ! icnt(1:2) done below
[5118]	1218	ENDIF
[9367]	1219	! we do not read the overlap -> we start to read at nldi, nldj
[679]	1220	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1221	! IF( idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /)
[9367]	1222	IF( llnoov .AND. idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /)
[679]	1223	! we do not read the overlap and the extra-halos -> from nldi to nlei and from nldj to nlej
	1224	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1225	! icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
[9367]	1226	IF( llnoov ) THEN ; icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
	1227	ELSE ; icnt(1:2) = (/ nlci , nlcj /)
[544]	1228	ENDIF
[9367]	1229	IF( PRESENT(pv_r3d) ) THEN
	1230	IF( idom == jpdom_data ) THEN ; icnt(3) = inlev
	1231	ELSEIF( ll_depth_spec .AND. PRESENT(kstart) ) THEN ; istart(3) = kstart(3) ; icnt(3) = kcount(3)
	1232	ELSE ; icnt(3) = inlev
	1233	ENDIF
	1234	ENDIF
[544]	1235	ENDIF
	1236	ENDIF
[679]	1237	ENDIF
[544]	1238
[9367]	1239	! check that istart and icnt can be used with this file
	1240	!-
	1241	DO jl = 1, jpmax_dims
	1242	itmp = istart(jl)+icnt(jl)-1
	1243	IF( itmp > idimsz(jl) .AND. idimsz(jl) /= 0 ) THEN
	1244	WRITE( ctmp1, FMT="('(istart(', i1, ') + icnt(', i1, ') - 1) = ', i5)" ) jl, jl, itmp
	1245	WRITE( ctmp2, FMT="(' is larger than idimsz(', i1,') = ', i5)" ) jl, idimsz(jl)
	1246	CALL ctl_stop( trim(clinfo), 'start and count too big regarding to the size of the data, ', ctmp1, ctmp2 )
	1247	ENDIF
	1248	END DO
[544]	1249
[9367]	1250	! check that icnt matches the input array
	1251	!-
	1252	IF( idom == jpdom_unknown ) THEN
	1253	IF( irankpv == 1 ) ishape(1:1) = SHAPE(pv_r1d)
	1254	IF( irankpv == 2 ) ishape(1:2) = SHAPE(pv_r2d)
	1255	IF( irankpv == 3 ) ishape(1:3) = SHAPE(pv_r3d)
	1256	ctmp1 = 'd'
	1257	ELSE
	1258	IF( irankpv == 2 ) THEN
[679]	1259	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1260	! ishape(1:2) = SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1 = 'd(nldi:nlei,nldj:nlej)'
[9367]	1261	IF( llnoov ) THEN ; ishape(1:2)=SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1='d(nldi:nlei,nldj:nlej)'
	1262	ELSE ; ishape(1:2)=SHAPE(pv_r2d(1 :nlci,1 :nlcj )) ; ctmp1='d(1:nlci,1:nlcj)'
	1263	ENDIF
[544]	1264	ENDIF
[9367]	1265	IF( irankpv == 3 ) THEN
[679]	1266	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1267	! ishape(1:3) = SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1 = 'd(nldi:nlei,nldj:nlej,:)'
[9367]	1268	IF( llnoov ) THEN ; ishape(1:3)=SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1='d(nldi:nlei,nldj:nlej,:)'
	1269	ELSE ; ishape(1:3)=SHAPE(pv_r3d(1 :nlci,1 :nlcj,:)) ; ctmp1='d(1:nlci,1:nlcj,:)'
	1270	ENDIF
[544]	1271	ENDIF
[679]	1272	ENDIF
	1273
[9367]	1274	DO jl = 1, irankpv
	1275	WRITE( ctmp2, FMT="(', ', i1,'): ', i5,' /= icnt(', i1,'):', i5)" ) jl, ishape(jl), jl, icnt(jl)
	1276	IF( ishape(jl) /= icnt(jl) ) CALL ctl_stop( TRIM(clinfo), 'size(pv_r'//clrankpv//TRIM(ctmp1)//TRIM(ctmp2) )
	1277	END DO
[679]	1278
[9367]	1279	ENDIF
[544]	1280
[9367]	1281	! read the data
	1282	!-
	1283	IF( idvar > 0 .AND. istop == nstop ) THEN ! no additional errors until this point...
	1284	!
[679]	1285	! find the right index of the array to be read
	1286	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1287	! IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej
	1288	! ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1289	! ENDIF
[9367]	1290	IF( llnoov ) THEN
	1291	IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej
	1292	ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1293	ENDIF
	1294	ELSE
	1295	IF( idom /= jpdom_unknown ) THEN ; ix1 = 1 ; ix2 = nlci ; iy1 = 1 ; iy2 = nlcj
	1296	ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1297	ENDIF
[679]	1298	ENDIF
	1299
[10425]	1300	CALL iom_nf90_get( kiomid, idvar, inbdim, istart, icnt, ix1, ix2, iy1, iy2, pv_r1d, pv_r2d, pv_r3d )
[679]	1301
[9367]	1302	IF( istop == nstop ) THEN ! no additional errors until this point...
	1303	IF(lwp) WRITE(numout,"(10x,' read ',a,' (rec: ',i6,') in ',a,' ok')") TRIM(cdvar), itime, TRIM(iom_file(kiomid)%name)
	1304
	1305	!--- overlap areas and extra hallows (mpp)
	1306	IF( PRESENT(pv_r2d) .AND. idom /= jpdom_unknown ) THEN
[11536]	1307	CALL lbc_lnk( 'iom', pv_r2d,'Z', -999., kfillmode = jpfillnothing )
[9367]	1308	ELSEIF( PRESENT(pv_r3d) .AND. idom /= jpdom_unknown ) THEN
	1309	! this if could be simplified with the new lbc_lnk that works with any size of the 3rd dimension
	1310	IF( icnt(3) == inlev ) THEN
[11536]	1311	CALL lbc_lnk( 'iom', pv_r3d,'Z', -999., kfillmode = jpfillnothing )
[9367]	1312	ELSE ! put some arbitrary value (a call to lbc_lnk will be done later...)
	1313	DO jj = nlcj+1, jpj ; pv_r3d(1:nlci, jj, :) = pv_r3d(1:nlci, nlej, :) ; END DO
	1314	DO ji = nlci+1, jpi ; pv_r3d(ji , : , :) = pv_r3d(nlei , : , :) ; END DO
	1315	ENDIF
[679]	1316	ENDIF
[9367]	1317	!
	1318	ELSE
	1319	! return if istop == nstop is false
	1320	RETURN
[679]	1321	ENDIF
[9367]	1322	ELSE
	1323	! return if statment idvar > 0 .AND. istop == nstop is false
	1324	RETURN
	1325	ENDIF
	1326	!
	1327	ELSE ! read using XIOS. Only if KEY_IOMPUT is defined
	1328	#if defined key_iomput
	1329	!would be good to be able to check which context is active and swap only if current is not restart
	1330	CALL iom_swap( TRIM(crxios_context) )
	1331	IF( PRESENT(pv_r3d) ) THEN
[9535]	1332	pv_r3d(:, :, :) = 0.
[9367]	1333	if(lwp) write(numout,*) 'XIOS RST READ (3D): ',trim(cdvar)
	1334	CALL xios_recv_field( trim(cdvar), pv_r3d)
	1335	IF(idom /= jpdom_unknown ) then
[11536]	1336	CALL lbc_lnk( 'iom', pv_r3d,'Z', -999., kfillmode = jpfillnothing)
[679]	1337	ENDIF
[9367]	1338	ELSEIF( PRESENT(pv_r2d) ) THEN
[9535]	1339	pv_r2d(:, :) = 0.
[9367]	1340	if(lwp) write(numout,*) 'XIOS RST READ (2D): ', trim(cdvar)
	1341	CALL xios_recv_field( trim(cdvar), pv_r2d)
	1342	IF(idom /= jpdom_unknown ) THEN
[11536]	1343	CALL lbc_lnk('iom', pv_r2d,'Z',-999., kfillmode = jpfillnothing)
[9367]	1344	ENDIF
	1345	ELSEIF( PRESENT(pv_r1d) ) THEN
[9535]	1346	pv_r1d(:) = 0.
[9367]	1347	if(lwp) write(numout,*) 'XIOS RST READ (1D): ', trim(cdvar)
	1348	CALL xios_recv_field( trim(cdvar), pv_r1d)
[544]	1349	ENDIF
[9367]	1350	CALL iom_swap( TRIM(cxios_context) )
	1351	#else
	1352	istop = istop + 1
	1353	clinfo = 'Can not use XIOS in iom_get_123d, file: '//trim(clname)//', var:'//trim(cdvar)
	1354	#endif
[544]	1355	ENDIF
[9367]	1356	!some final adjustments
	1357	! C1D case : always call lbc_lnk to replicate the central value over the whole 3X3 domain
[10425]	1358	IF( lk_c1d .AND. PRESENT(pv_r2d) ) CALL lbc_lnk( 'iom', pv_r2d,'Z',1. )
	1359	IF( lk_c1d .AND. PRESENT(pv_r3d) ) CALL lbc_lnk( 'iom', pv_r3d,'Z',1. )
[9367]	1360
	1361	!--- Apply scale_factor and offset
	1362	zscf = iom_file(kiomid)%scf(idvar) ! scale factor
	1363	zofs = iom_file(kiomid)%ofs(idvar) ! offset
	1364	IF( PRESENT(pv_r1d) ) THEN
	1365	IF( zscf /= 1. ) pv_r1d(:) = pv_r1d(:) * zscf
	1366	IF( zofs /= 0. ) pv_r1d(:) = pv_r1d(:) + zofs
	1367	ELSEIF( PRESENT(pv_r2d) ) THEN
	1368	IF( zscf /= 1.) pv_r2d(:,:) = pv_r2d(:,:) * zscf
	1369	IF( zofs /= 0.) pv_r2d(:,:) = pv_r2d(:,:) + zofs
	1370	ELSEIF( PRESENT(pv_r3d) ) THEN
	1371	IF( zscf /= 1.) pv_r3d(:,:,:) = pv_r3d(:,:,:) * zscf
	1372	IF( zofs /= 0.) pv_r3d(:,:,:) = pv_r3d(:,:,:) + zofs
	1373	ENDIF
[544]	1374	!
	1375	END SUBROUTINE iom_get_123d
	1376
[12193]	1377	SUBROUTINE iom_get_var( cdname, z2d)
	1378	CHARACTER(LEN=*), INTENT(in ) :: cdname
	1379	REAL(wp), DIMENSION(jpi,jpj) :: z2d
	1380	#if defined key_iomput
	1381	IF( xios_field_is_active( cdname, at_current_timestep_arg = .TRUE. ) ) THEN
	1382	z2d(:,:) = 0._wp
	1383	CALL xios_recv_field( cdname, z2d)
	1384	ENDIF
	1385	#else
	1386	IF( .FALSE. ) WRITE(numout,*) cdname, z2d ! useless test to avoid compilation warnings
	1387	#endif
	1388	END SUBROUTINE iom_get_var
[544]	1389
[12193]	1390
[10522]	1391	FUNCTION iom_getszuld ( kiomid )
	1392	!!-----------------------------------------------------------------------
	1393	!! * FUNCTION iom_getszuld *
[544]	1394	!!
[10522]	1395	!! ** Purpose : get the size of the unlimited dimension in a file
	1396	!! (return -1 if not found)
	1397	!!-----------------------------------------------------------------------
	1398	INTEGER, INTENT(in ) :: kiomid ! file Identifier
[544]	1399	!
[10522]	1400	INTEGER :: iom_getszuld
	1401	!!-----------------------------------------------------------------------
	1402	iom_getszuld = -1
[679]	1403	IF( kiomid > 0 ) THEN
[10523]	1404	IF( iom_file(kiomid)%iduld > 0 ) iom_getszuld = iom_file(kiomid)%lenuld
[544]	1405	ENDIF
[10522]	1406	END FUNCTION iom_getszuld
	1407
[544]	1408
	1409	!!----------------------------------------------------------------------
[10425]	1410	!! INTERFACE iom_chkatt
[2528]	1411	!!----------------------------------------------------------------------
[10425]	1412	SUBROUTINE iom_chkatt( kiomid, cdatt, llok, ksize, cdvar )
[2528]	1413	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1414	CHARACTER(len=*), INTENT(in ) :: cdatt ! Name of the attribute
[10425]	1415	LOGICAL , INTENT( out) :: llok ! Error code
	1416	INTEGER , INTENT( out), OPTIONAL :: ksize ! Size of the attribute array
[7646]	1417	CHARACTER(len=*), INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[2528]	1418	!
	1419	IF( kiomid > 0 ) THEN
[10425]	1420	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_chkatt( kiomid, cdatt, llok, ksize=ksize, cdvar=cdvar )
[2528]	1421	ENDIF
[10425]	1422	!
	1423	END SUBROUTINE iom_chkatt
	1424
	1425	!!----------------------------------------------------------------------
	1426	!! INTERFACE iom_getatt
	1427	!!----------------------------------------------------------------------
	1428	SUBROUTINE iom_g0d_iatt( kiomid, cdatt, katt0d, cdvar )
	1429	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1430	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1431	INTEGER , INTENT( out) :: katt0d ! read field
	1432	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1433	!
	1434	IF( kiomid > 0 ) THEN
	1435	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, katt0d = katt0d, cdvar=cdvar )
	1436	ENDIF
[7646]	1437	END SUBROUTINE iom_g0d_iatt
[2528]	1438
[10425]	1439	SUBROUTINE iom_g1d_iatt( kiomid, cdatt, katt1d, cdvar )
	1440	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1441	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1442	INTEGER, DIMENSION(:) , INTENT( out) :: katt1d ! read field
	1443	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1444	!
	1445	IF( kiomid > 0 ) THEN
[10425]	1446	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, katt1d = katt1d, cdvar=cdvar )
[7646]	1447	ENDIF
[10425]	1448	END SUBROUTINE iom_g1d_iatt
	1449
	1450	SUBROUTINE iom_g0d_ratt( kiomid, cdatt, patt0d, cdvar )
	1451	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1452	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1453	REAL(wp) , INTENT( out) :: patt0d ! read field
	1454	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1455	!
	1456	IF( kiomid > 0 ) THEN
	1457	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, patt0d = patt0d, cdvar=cdvar )
	1458	ENDIF
[7646]	1459	END SUBROUTINE iom_g0d_ratt
[2528]	1460
[10425]	1461	SUBROUTINE iom_g1d_ratt( kiomid, cdatt, patt1d, cdvar )
	1462	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1463	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1464	REAL(wp), DIMENSION(:), INTENT( out) :: patt1d ! read field
	1465	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1466	!
	1467	IF( kiomid > 0 ) THEN
[10425]	1468	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, patt1d = patt1d, cdvar=cdvar )
[7646]	1469	ENDIF
[10425]	1470	END SUBROUTINE iom_g1d_ratt
	1471
	1472	SUBROUTINE iom_g0d_catt( kiomid, cdatt, cdatt0d, cdvar )
	1473	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1474	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1475	CHARACTER(len=*) , INTENT( out) :: cdatt0d ! read field
	1476	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1477	!
	1478	IF( kiomid > 0 ) THEN
	1479	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, cdatt0d = cdatt0d, cdvar=cdvar )
	1480	ENDIF
[7646]	1481	END SUBROUTINE iom_g0d_catt
	1482
[10425]	1483
[2528]	1484	!!----------------------------------------------------------------------
[7646]	1485	!! INTERFACE iom_putatt
	1486	!!----------------------------------------------------------------------
[10425]	1487	SUBROUTINE iom_p0d_iatt( kiomid, cdatt, katt0d, cdvar )
	1488	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1489	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1490	INTEGER , INTENT(in ) :: katt0d ! written field
	1491	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1492	!
	1493	IF( kiomid > 0 ) THEN
[10425]	1494	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, katt0d = katt0d, cdvar=cdvar )
[7646]	1495	ENDIF
	1496	END SUBROUTINE iom_p0d_iatt
	1497
[10425]	1498	SUBROUTINE iom_p1d_iatt( kiomid, cdatt, katt1d, cdvar )
	1499	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1500	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1501	INTEGER, DIMENSION(:) , INTENT(in ) :: katt1d ! written field
	1502	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1503	!
	1504	IF( kiomid > 0 ) THEN
[10425]	1505	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, katt1d = katt1d, cdvar=cdvar )
[7646]	1506	ENDIF
[10425]	1507	END SUBROUTINE iom_p1d_iatt
	1508
	1509	SUBROUTINE iom_p0d_ratt( kiomid, cdatt, patt0d, cdvar )
	1510	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1511	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1512	REAL(wp) , INTENT(in ) :: patt0d ! written field
	1513	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1514	!
	1515	IF( kiomid > 0 ) THEN
	1516	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, patt0d = patt0d, cdvar=cdvar )
	1517	ENDIF
[7646]	1518	END SUBROUTINE iom_p0d_ratt
	1519
[10425]	1520	SUBROUTINE iom_p1d_ratt( kiomid, cdatt, patt1d, cdvar )
	1521	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1522	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1523	REAL(wp), DIMENSION(:), INTENT(in ) :: patt1d ! written field
	1524	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1525	!
	1526	IF( kiomid > 0 ) THEN
[10425]	1527	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, patt1d = patt1d, cdvar=cdvar )
[7646]	1528	ENDIF
[10425]	1529	END SUBROUTINE iom_p1d_ratt
	1530
	1531	SUBROUTINE iom_p0d_catt( kiomid, cdatt, cdatt0d, cdvar )
	1532	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1533	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1534	CHARACTER(len=*) , INTENT(in ) :: cdatt0d ! written field
	1535	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1536	!
	1537	IF( kiomid > 0 ) THEN
	1538	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, cdatt0d = cdatt0d, cdvar=cdvar )
	1539	ENDIF
[7646]	1540	END SUBROUTINE iom_p0d_catt
	1541
[10425]	1542
[7646]	1543	!!----------------------------------------------------------------------
[544]	1544	!! INTERFACE iom_rstput
	1545	!!----------------------------------------------------------------------
[9367]	1546	SUBROUTINE iom_rp0d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1547	INTEGER , INTENT(in) :: kt ! ocean time-step
	1548	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1549	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1550	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[556]	1551	REAL(wp) , INTENT(in) :: pvar ! written field
[544]	1552	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1553	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1554	LOGICAL :: llx ! local xios write flag
[544]	1555	INTEGER :: ivid ! variable id
[9367]	1556
	1557	llx = .FALSE.
	1558	IF(PRESENT(ldxios)) llx = ldxios
	1559	IF( llx ) THEN
	1560	#ifdef key_iomput
	1561	IF( kt == kwrite ) THEN
	1562	IF(lwp) write(numout,*) 'RESTART: write (XIOS 0D) ',trim(cdvar)
	1563	CALL xios_send_field(trim(cdvar), pvar)
	1564	ENDIF
	1565	#endif
	1566	ELSE
	1567	IF( kiomid > 0 ) THEN
	1568	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1569	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1570	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r0d = pvar )
[9367]	1571	ENDIF
[679]	1572	ENDIF
	1573	ENDIF
[550]	1574	END SUBROUTINE iom_rp0d
[544]	1575
[9367]	1576	SUBROUTINE iom_rp1d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1577	INTEGER , INTENT(in) :: kt ! ocean time-step
	1578	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1579	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1580	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1581	REAL(wp) , INTENT(in), DIMENSION( :) :: pvar ! written field
[544]	1582	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1583	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1584	LOGICAL :: llx ! local xios write flag
[544]	1585	INTEGER :: ivid ! variable id
[9367]	1586
	1587	llx = .FALSE.
	1588	IF(PRESENT(ldxios)) llx = ldxios
	1589	IF( llx ) THEN
	1590	#ifdef key_iomput
	1591	IF( kt == kwrite ) THEN
	1592	IF(lwp) write(numout,*) 'RESTART: write (XIOS 1D) ',trim(cdvar)
	1593	CALL xios_send_field(trim(cdvar), pvar)
	1594	ENDIF
	1595	#endif
	1596	ELSE
	1597	IF( kiomid > 0 ) THEN
	1598	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1599	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1600	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r1d = pvar )
[9367]	1601	ENDIF
[679]	1602	ENDIF
	1603	ENDIF
[550]	1604	END SUBROUTINE iom_rp1d
[544]	1605
[9367]	1606	SUBROUTINE iom_rp2d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1607	INTEGER , INTENT(in) :: kt ! ocean time-step
	1608	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1609	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1610	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1611	REAL(wp) , INTENT(in), DIMENSION(:, : ) :: pvar ! written field
[544]	1612	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1613	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1614	LOGICAL :: llx
[544]	1615	INTEGER :: ivid ! variable id
[9367]	1616
	1617	llx = .FALSE.
	1618	IF(PRESENT(ldxios)) llx = ldxios
	1619	IF( llx ) THEN
	1620	#ifdef key_iomput
	1621	IF( kt == kwrite ) THEN
	1622	IF(lwp) write(numout,*) 'RESTART: write (XIOS 2D) ',trim(cdvar)
	1623	CALL xios_send_field(trim(cdvar), pvar)
	1624	ENDIF
	1625	#endif
	1626	ELSE
	1627	IF( kiomid > 0 ) THEN
	1628	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1629	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1630	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r2d = pvar )
[9367]	1631	ENDIF
[679]	1632	ENDIF
	1633	ENDIF
[550]	1634	END SUBROUTINE iom_rp2d
[544]	1635
[9367]	1636	SUBROUTINE iom_rp3d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1637	INTEGER , INTENT(in) :: kt ! ocean time-step
	1638	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1639	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1640	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1641	REAL(wp) , INTENT(in), DIMENSION(:,:,:) :: pvar ! written field
[544]	1642	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1643	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1644	LOGICAL :: llx ! local xios write flag
[544]	1645	INTEGER :: ivid ! variable id
[9367]	1646
	1647	llx = .FALSE.
	1648	IF(PRESENT(ldxios)) llx = ldxios
	1649	IF( llx ) THEN
	1650	#ifdef key_iomput
	1651	IF( kt == kwrite ) THEN
	1652	IF(lwp) write(numout,*) 'RESTART: write (XIOS 3D) ',trim(cdvar)
	1653	CALL xios_send_field(trim(cdvar), pvar)
	1654	ENDIF
	1655	#endif
	1656	ELSE
	1657	IF( kiomid > 0 ) THEN
	1658	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1659	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1660	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r3d = pvar )
[9367]	1661	ENDIF
[679]	1662	ENDIF
	1663	ENDIF
[550]	1664	END SUBROUTINE iom_rp3d
[1359]	1665
	1666
[10425]	1667	SUBROUTINE iom_delay_rst( cdaction, cdcpnt, kncid )
	1668	!!---------------------------------------------------------------------
	1669	!! Routine iom_delay_rst: used read/write restart related to mpp_delay
	1670	!!
	1671	!!---------------------------------------------------------------------
	1672	CHARACTER(len=*), INTENT(in ) :: cdaction !
	1673	CHARACTER(len=*), INTENT(in ) :: cdcpnt
	1674	INTEGER , INTENT(in ) :: kncid
	1675	!
	1676	INTEGER :: ji
	1677	INTEGER :: indim
	1678	LOGICAL :: llattexist
	1679	REAL(wp), ALLOCATABLE, DIMENSION(:) :: zreal1d
	1680	!!---------------------------------------------------------------------
	1681	!
	1682	! ===================================
	1683	IF( TRIM(cdaction) == 'READ' ) THEN ! read restart related to mpp_delay !
	1684	! ===================================
	1685	DO ji = 1, nbdelay
	1686	IF ( c_delaycpnt(ji) == cdcpnt ) THEN
	1687	CALL iom_chkatt( kncid, 'DELAY_'//c_delaylist(ji), llattexist, indim )
	1688	IF( llattexist ) THEN
	1689	ALLOCATE( todelay(ji)%z1d(indim) )
	1690	CALL iom_getatt( kncid, 'DELAY_'//c_delaylist(ji), todelay(ji)%z1d(:) )
	1691	ndelayid(ji) = 0 ! set to 0 to specify that the value was read in the restart
	1692	ENDIF
	1693	ENDIF
	1694	END DO
	1695	! ====================================
	1696	ELSE ! write restart related to mpp_delay !
	1697	! ====================================
	1698	DO ji = 1, nbdelay ! save only ocean delayed global communication variables
	1699	IF ( c_delaycpnt(ji) == cdcpnt ) THEN
	1700	IF( ASSOCIATED(todelay(ji)%z1d) ) THEN
	1701	CALL mpp_delay_rcv(ji) ! make sure %z1d is received
	1702	CALL iom_putatt( kncid, 'DELAY_'//c_delaylist(ji), todelay(ji)%z1d(:) )
	1703	ENDIF
	1704	ENDIF
	1705	END DO
	1706	!
	1707	ENDIF
	1708
	1709	END SUBROUTINE iom_delay_rst
	1710
	1711
	1712
[544]	1713	!!----------------------------------------------------------------------
[1457]	1714	!! INTERFACE iom_put
[1359]	1715	!!----------------------------------------------------------------------
[1738]	1716	SUBROUTINE iom_p0d( cdname, pfield0d )
	1717	CHARACTER(LEN=*), INTENT(in) :: cdname
	1718	REAL(wp) , INTENT(in) :: pfield0d
[11536]	1719	!! REAL(wp) , DIMENSION(jpi,jpj) :: zz ! masson
[1738]	1720	#if defined key_iomput
[11536]	1721	!!clem zz(:,:)=pfield0d
	1722	!!clem CALL xios_send_field(cdname, zz)
	1723	CALL xios_send_field(cdname, (/pfield0d/))
[1738]	1724	#else
	1725	IF( .FALSE. ) WRITE(numout,*) cdname, pfield0d ! useless test to avoid compilation warnings
	1726	#endif
	1727	END SUBROUTINE iom_p0d
	1728
[3294]	1729	SUBROUTINE iom_p1d( cdname, pfield1d )
	1730	CHARACTER(LEN=*) , INTENT(in) :: cdname
	1731	REAL(wp), DIMENSION(:), INTENT(in) :: pfield1d
	1732	#if defined key_iomput
[3695]	1733	CALL xios_send_field( cdname, RESHAPE( (/pfield1d/), (/1,1,SIZE(pfield1d)/) ) )
[3294]	1734	#else
	1735	IF( .FALSE. ) WRITE(numout,*) cdname, pfield1d ! useless test to avoid compilation warnings
	1736	#endif
	1737	END SUBROUTINE iom_p1d
	1738
[1359]	1739	SUBROUTINE iom_p2d( cdname, pfield2d )
	1740	CHARACTER(LEN=*) , INTENT(in) :: cdname
[2715]	1741	REAL(wp), DIMENSION(:,:), INTENT(in) :: pfield2d
[1412]	1742	#if defined key_iomput
[3695]	1743	CALL xios_send_field(cdname, pfield2d)
[1520]	1744	#else
	1745	IF( .FALSE. ) WRITE(numout,*) cdname, pfield2d ! useless test to avoid compilation warnings
[1359]	1746	#endif
	1747	END SUBROUTINE iom_p2d
[544]	1748
[1359]	1749	SUBROUTINE iom_p3d( cdname, pfield3d )
	1750	CHARACTER(LEN=*) , INTENT(in) :: cdname
[2715]	1751	REAL(wp), DIMENSION(:,:,:), INTENT(in) :: pfield3d
[1412]	1752	#if defined key_iomput
[9019]	1753	CALL xios_send_field( cdname, pfield3d )
[1520]	1754	#else
	1755	IF( .FALSE. ) WRITE(numout,*) cdname, pfield3d ! useless test to avoid compilation warnings
[1359]	1756	#endif
	1757	END SUBROUTINE iom_p3d
[544]	1758
[12193]	1759	SUBROUTINE iom_p4d( cdname, pfield4d )
	1760	CHARACTER(LEN=*) , INTENT(in) :: cdname
	1761	REAL(wp), DIMENSION(:,:,:,:), INTENT(in) :: pfield4d
[1412]	1762	#if defined key_iomput
[12193]	1763	CALL xios_send_field(cdname, pfield4d)
	1764	#else
	1765	IF( .FALSE. ) WRITE(numout,*) cdname, pfield4d ! useless test to avoid compilation warnings
	1766	#endif
	1767	END SUBROUTINE iom_p4d
	1768
	1769
	1770	#if defined key_iomput
[9019]	1771	!!----------------------------------------------------------------------
[9802]	1772	!! 'key_iomput' XIOS interface
[9019]	1773	!!----------------------------------------------------------------------
[1359]	1774
[9930]	1775	SUBROUTINE iom_set_domain_attr( cdid, ni_glo, nj_glo, ibegin, jbegin, ni, nj, &
[5363]	1776	& data_dim, data_ibegin, data_ni, data_jbegin, data_nj, lonvalue, latvalue, mask, &
[5415]	1777	& nvertex, bounds_lon, bounds_lat, area )
[9019]	1778	!!----------------------------------------------------------------------
	1779	!!----------------------------------------------------------------------
	1780	CHARACTER(LEN=*) , INTENT(in) :: cdid
	1781	INTEGER , OPTIONAL, INTENT(in) :: ni_glo, nj_glo, ibegin, jbegin, ni, nj
	1782	INTEGER , OPTIONAL, INTENT(in) :: data_dim, data_ibegin, data_ni, data_jbegin, data_nj
[9930]	1783	INTEGER , OPTIONAL, INTENT(in) :: nvertex
[9019]	1784	REAL(wp), DIMENSION(:) , OPTIONAL, INTENT(in) :: lonvalue, latvalue
	1785	REAL(wp), DIMENSION(:,:), OPTIONAL, INTENT(in) :: bounds_lon, bounds_lat, area
	1786	LOGICAL , DIMENSION(:) , OPTIONAL, INTENT(in) :: mask
	1787	!!----------------------------------------------------------------------
	1788	!
	1789	IF( xios_is_valid_domain (cdid) ) THEN
[4148]	1790	CALL xios_set_domain_attr ( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
	1791	& data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
[7646]	1792	& lonvalue_1D=lonvalue, latvalue_1D=latvalue, mask_1D=mask, nvertex=nvertex, bounds_lon_1D=bounds_lon, &
	1793	& bounds_lat_1D=bounds_lat, area=area, type='curvilinear')
[9367]	1794	ENDIF
[9019]	1795	IF( xios_is_valid_domaingroup(cdid) ) THEN
[4148]	1796	CALL xios_set_domaingroup_attr( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
	1797	& data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
[7646]	1798	& lonvalue_1D=lonvalue, latvalue_1D=latvalue, mask_1D=mask, nvertex=nvertex, bounds_lon_1D=bounds_lon, &
	1799	& bounds_lat_1D=bounds_lat, area=area, type='curvilinear' )
[3695]	1800	ENDIF
[9019]	1801	!
[4148]	1802	CALL xios_solve_inheritance()
[9019]	1803	!
[3695]	1804	END SUBROUTINE iom_set_domain_attr
	1805
	1806
[9019]	1807	SUBROUTINE iom_set_zoom_domain_attr( cdid, ibegin, jbegin, ni, nj )
	1808	!!----------------------------------------------------------------------
	1809	!!----------------------------------------------------------------------
[9930]	1810	CHARACTER(LEN=*), INTENT(in) :: cdid
	1811	INTEGER , INTENT(in) :: ibegin, jbegin, ni, nj
	1812	!
	1813	TYPE(xios_gridgroup) :: gridgroup_hdl
	1814	TYPE(xios_grid) :: grid_hdl
	1815	TYPE(xios_domain) :: domain_hdl
	1816	TYPE(xios_axis) :: axis_hdl
	1817	CHARACTER(LEN=64) :: cldomrefid ! domain_ref name
	1818	CHARACTER(len=1) :: cl1 ! last character of this name
[9019]	1819	!!----------------------------------------------------------------------
[9930]	1820	!
	1821	IF( xios_is_valid_zoom_domain(cdid) ) THEN
	1822	! define the zoom_domain attributs
	1823	CALL xios_set_zoom_domain_attr( cdid, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj )
	1824	! define a new 2D grid with this new domain
	1825	CALL xios_get_handle("grid_definition", gridgroup_hdl )
	1826	CALL xios_add_child(gridgroup_hdl, grid_hdl, TRIM(cdid)//'_2D' ) ! add a new 2D grid to grid_definition
	1827	CALL xios_add_child(grid_hdl, domain_hdl, TRIM(cdid) ) ! add its domain
	1828	! define a new 3D grid with this new domain
	1829	CALL xios_add_child(gridgroup_hdl, grid_hdl, TRIM(cdid)//'_3D' ) ! add a new 3D grid to grid_definition
	1830	CALL xios_add_child(grid_hdl, domain_hdl, TRIM(cdid) ) ! add its domain
	1831	! vertical axis
	1832	cl1 = cdid(LEN_TRIM(cdid):) ! last letter of cdid
	1833	cl1 = CHAR(ICHAR(cl1)+32) ! from upper to lower case
	1834	CALL xios_add_child(grid_hdl, axis_hdl, 'depth'//cl1) ! add its axis
	1835	ENDIF
	1836	!
[7646]	1837	END SUBROUTINE iom_set_zoom_domain_attr
	1838
	1839
[5415]	1840	SUBROUTINE iom_set_axis_attr( cdid, paxis, bounds )
[9019]	1841	!!----------------------------------------------------------------------
	1842	!!----------------------------------------------------------------------
[4148]	1843	CHARACTER(LEN=*) , INTENT(in) :: cdid
[5415]	1844	REAL(wp), DIMENSION(:) , OPTIONAL, INTENT(in) :: paxis
	1845	REAL(wp), DIMENSION(:,:), OPTIONAL, INTENT(in) :: bounds
[9019]	1846	!!----------------------------------------------------------------------
	1847	IF( PRESENT(paxis) ) THEN
	1848	IF( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, n_glo=SIZE(paxis), value=paxis )
	1849	IF( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, n_glo=SIZE(paxis), value=paxis )
[5415]	1850	ENDIF
[9019]	1851	IF( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, bounds=bounds )
	1852	IF( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, bounds=bounds )
[4148]	1853	CALL xios_solve_inheritance()
[3737]	1854	END SUBROUTINE iom_set_axis_attr
	1855
	1856
[4148]	1857	SUBROUTINE iom_set_field_attr( cdid, freq_op, freq_offset )
[9019]	1858	!!----------------------------------------------------------------------
	1859	!!----------------------------------------------------------------------
	1860	CHARACTER(LEN=*) , INTENT(in) :: cdid
	1861	TYPE(xios_duration), OPTIONAL, INTENT(in) :: freq_op
	1862	TYPE(xios_duration), OPTIONAL, INTENT(in) :: freq_offset
	1863	!!----------------------------------------------------------------------
	1864	IF( xios_is_valid_field (cdid) ) CALL xios_set_field_attr ( cdid, freq_op=freq_op, freq_offset=freq_offset )
	1865	IF( xios_is_valid_fieldgroup(cdid) ) CALL xios_set_fieldgroup_attr( cdid, freq_op=freq_op, freq_offset=freq_offset )
[4148]	1866	CALL xios_solve_inheritance()
[3695]	1867	END SUBROUTINE iom_set_field_attr
	1868
	1869
[4148]	1870	SUBROUTINE iom_set_file_attr( cdid, name, name_suffix )
[9019]	1871	!!----------------------------------------------------------------------
	1872	!!----------------------------------------------------------------------
[4148]	1873	CHARACTER(LEN=*) , INTENT(in) :: cdid
[3695]	1874	CHARACTER(LEN=*),OPTIONAL , INTENT(in) :: name, name_suffix
[9019]	1875	!!----------------------------------------------------------------------
	1876	IF( xios_is_valid_file (cdid) ) CALL xios_set_file_attr ( cdid, name=name, name_suffix=name_suffix )
	1877	IF( xios_is_valid_filegroup(cdid) ) CALL xios_set_filegroup_attr( cdid, name=name, name_suffix=name_suffix )
[4148]	1878	CALL xios_solve_inheritance()
[3771]	1879	END SUBROUTINE iom_set_file_attr
[3695]	1880
	1881
[4148]	1882	SUBROUTINE iom_get_file_attr( cdid, name, name_suffix, output_freq )
[9019]	1883	!!----------------------------------------------------------------------
	1884	!!----------------------------------------------------------------------
[4148]	1885	CHARACTER(LEN=*) , INTENT(in ) :: cdid
[7646]	1886	CHARACTER(LEN=*),OPTIONAL , INTENT(out) :: name, name_suffix
	1887	TYPE(xios_duration), OPTIONAL , INTENT(out) :: output_freq
[4148]	1888	LOGICAL :: llexist1,llexist2,llexist3
	1889	!---------------------------------------------------------------------
	1890	IF( PRESENT( name ) ) name = '' ! default values
	1891	IF( PRESENT( name_suffix ) ) name_suffix = ''
[7646]	1892	IF( PRESENT( output_freq ) ) output_freq = xios_duration(0,0,0,0,0,0)
[9019]	1893	IF( xios_is_valid_file (cdid) ) THEN
[4148]	1894	CALL xios_solve_inheritance()
	1895	CALL xios_is_defined_file_attr ( cdid, name = llexist1, name_suffix = llexist2, output_freq = llexist3)
	1896	IF(llexist1) CALL xios_get_file_attr ( cdid, name = name )
	1897	IF(llexist2) CALL xios_get_file_attr ( cdid, name_suffix = name_suffix )
	1898	IF(llexist3) CALL xios_get_file_attr ( cdid, output_freq = output_freq )
	1899	ENDIF
[9019]	1900	IF( xios_is_valid_filegroup(cdid) ) THEN
[4148]	1901	CALL xios_solve_inheritance()
	1902	CALL xios_is_defined_filegroup_attr( cdid, name = llexist1, name_suffix = llexist2, output_freq = llexist3)
	1903	IF(llexist1) CALL xios_get_filegroup_attr( cdid, name = name )
	1904	IF(llexist2) CALL xios_get_filegroup_attr( cdid, name_suffix = name_suffix )
	1905	IF(llexist3) CALL xios_get_filegroup_attr( cdid, output_freq = output_freq )
	1906	ENDIF
	1907	END SUBROUTINE iom_get_file_attr
	1908
	1909
	1910	SUBROUTINE iom_set_grid_attr( cdid, mask )
[9019]	1911	!!----------------------------------------------------------------------
	1912	!!----------------------------------------------------------------------
[4148]	1913	CHARACTER(LEN=*) , INTENT(in) :: cdid
[3771]	1914	LOGICAL, DIMENSION(:,:,:), OPTIONAL, INTENT(in) :: mask
[9019]	1915	!!----------------------------------------------------------------------
	1916	IF( xios_is_valid_grid (cdid) ) CALL xios_set_grid_attr ( cdid, mask_3D=mask )
	1917	IF( xios_is_valid_gridgroup(cdid) ) CALL xios_set_gridgroup_attr( cdid, mask_3D=mask )
[4148]	1918	CALL xios_solve_inheritance()
[3771]	1919	END SUBROUTINE iom_set_grid_attr
[3695]	1920
[4152]	1921	SUBROUTINE iom_setkt( kt, cdname )
[9019]	1922	!!----------------------------------------------------------------------
	1923	!!----------------------------------------------------------------------
[4152]	1924	INTEGER , INTENT(in) :: kt
	1925	CHARACTER(LEN=*), INTENT(in) :: cdname
[9019]	1926	!!----------------------------------------------------------------------
[4152]	1927	CALL iom_swap( cdname ) ! swap to cdname context
	1928	CALL xios_update_calendar(kt)
[9019]	1929	IF( cdname /= TRIM(cxios_context) ) CALL iom_swap( TRIM(cxios_context) ) ! return back to nemo context
[4152]	1930	END SUBROUTINE iom_setkt
[3695]	1931
[4152]	1932	SUBROUTINE iom_context_finalize( cdname )
[9019]	1933	!!----------------------------------------------------------------------
	1934	!!----------------------------------------------------------------------
[4152]	1935	CHARACTER(LEN=*), INTENT(in) :: cdname
[9367]	1936	CHARACTER(LEN=120) :: clname
[9019]	1937	!!----------------------------------------------------------------------
[9367]	1938	clname = cdname
	1939	IF( TRIM(Agrif_CFixed()) .NE. '0' ) clname = TRIM(Agrif_CFixed())//"_"//clname
	1940	IF( xios_is_valid_context(clname) ) THEN
[4990]	1941	CALL iom_swap( cdname ) ! swap to cdname context
	1942	CALL xios_context_finalize() ! finalize the context
[5407]	1943	IF( cdname /= TRIM(cxios_context) ) CALL iom_swap( TRIM(cxios_context) ) ! return back to nemo context
[4990]	1944	ENDIF
[9367]	1945	!
[4152]	1946	END SUBROUTINE iom_context_finalize
	1947
	1948
[9984]	1949	SUBROUTINE set_grid( cdgrd, plon, plat, ldxios, ldrxios )
[1359]	1950	!!----------------------------------------------------------------------
[4148]	1951	!! * ROUTINE set_grid *
[1359]	1952	!!
[1725]	1953	!! ** Purpose : define horizontal grids
[1359]	1954	!!----------------------------------------------------------------------
[3771]	1955	CHARACTER(LEN=1) , INTENT(in) :: cdgrd
[1359]	1956	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plon
	1957	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plat
[3771]	1958	!
[9019]	1959	INTEGER :: ni, nj
[3771]	1960	REAL(wp), DIMENSION(jpi,jpj,jpk) :: zmask
[9984]	1961	LOGICAL, INTENT(IN) :: ldxios, ldrxios
[9019]	1962	!!----------------------------------------------------------------------
	1963	!
	1964	ni = nlei-nldi+1
	1965	nj = nlej-nldj+1
	1966	!
[7646]	1967	CALL iom_set_domain_attr("grid_"//cdgrd, ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-2, jbegin=njmpp+nldj-2, ni=ni, nj=nj)
[3771]	1968	CALL iom_set_domain_attr("grid_"//cdgrd, data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
[9984]	1969	!don't define lon and lat for restart reading context.
	1970	IF ( .NOT.ldrxios ) &
	1971	CALL iom_set_domain_attr("grid_"//cdgrd, lonvalue = RESHAPE(plon(nldi:nlei, nldj:nlej),(/ ni*nj /)), &
[3771]	1972	& latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
[9019]	1973	!
[9367]	1974	IF ( ln_mskland .AND. (.NOT.ldxios) ) THEN
[3771]	1975	! mask land points, keep values on coast line -> specific mask for U, V and W points
	1976	SELECT CASE ( cdgrd )
	1977	CASE('T') ; zmask(:,:,:) = tmask(:,:,:)
[10425]	1978	CASE('U') ; zmask(2:jpim1,:,:) = tmask(2:jpim1,:,:) + tmask(3:jpi,:,:) ; CALL lbc_lnk( 'iom', zmask, 'U', 1. )
	1979	CASE('V') ; zmask(:,2:jpjm1,:) = tmask(:,2:jpjm1,:) + tmask(:,3:jpj,:) ; CALL lbc_lnk( 'iom', zmask, 'V', 1. )
[3771]	1980	CASE('W') ; zmask(:,:,2:jpk ) = tmask(:,:,1:jpkm1) + tmask(:,:,2:jpk) ; zmask(:,:,1) = tmask(:,:,1)
	1981	END SELECT
	1982	!
[7646]	1983	CALL iom_set_domain_attr( "grid_"//cdgrd , mask = RESHAPE(zmask(nldi:nlei,nldj:nlej,1),(/ni*nj /)) /= 0. )
[4148]	1984	CALL iom_set_grid_attr ( "grid_"//cdgrd//"_3D", mask = RESHAPE(zmask(nldi:nlei,nldj:nlej,:),(/ni,nj,jpk/)) /= 0. )
[3771]	1985	ENDIF
[9019]	1986	!
[1359]	1987	END SUBROUTINE set_grid
	1988
[1725]	1989
[5415]	1990	SUBROUTINE set_grid_bounds( cdgrd, plon_cnr, plat_cnr, plon_pnt, plat_pnt )
[5363]	1991	!!----------------------------------------------------------------------
	1992	!! * ROUTINE set_grid_bounds *
	1993	!!
	1994	!! ** Purpose : define horizontal grid corners
	1995	!!
	1996	!!----------------------------------------------------------------------
[9019]	1997	CHARACTER(LEN=1) , INTENT(in) :: cdgrd
	1998	REAL(wp), DIMENSION(jpi,jpj) , INTENT(in) :: plon_cnr, plat_cnr ! Lat/lon coord. of a contiguous vertex of cell (i,j)
	1999	REAL(wp), DIMENSION(jpi,jpj), OPTIONAL, INTENT(in) :: plon_pnt, plat_pnt ! Lat/lon coord. of the point of cell (i,j)
[5363]	2000	!
[9019]	2001	INTEGER :: ji, jj, jn, ni, nj
[12182]	2002	INTEGER :: icnr, jcnr ! Offset such that the vertex coordinate (i+icnr,j+jcnr)
	2003	! ! represents the bottom-left corner of cell (i,j)
[9019]	2004	REAL(wp), ALLOCATABLE, DIMENSION(:,:,:,:) :: z_bnds ! Lat/lon coordinates of the vertices of cell (i,j)
	2005	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_fld ! Working array to determine where to rotate cells
	2006	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_rot ! Lat/lon working array for rotation of cells
	2007	!!----------------------------------------------------------------------
[5415]	2008	!
[9019]	2009	ALLOCATE( z_bnds(4,jpi,jpj,2), z_fld(jpi,jpj), z_rot(4,2) )
[5363]	2010	!
[5415]	2011	! Offset of coordinate representing bottom-left corner
[5363]	2012	SELECT CASE ( TRIM(cdgrd) )
[9019]	2013	CASE ('T', 'W') ; icnr = -1 ; jcnr = -1
	2014	CASE ('U') ; icnr = 0 ; jcnr = -1
	2015	CASE ('V') ; icnr = -1 ; jcnr = 0
[5363]	2016	END SELECT
[9019]	2017	!
	2018	ni = nlei-nldi+1 ! Dimensions of subdomain interior
	2019	nj = nlej-nldj+1
	2020	!
[5363]	2021	z_fld(:,:) = 1._wp
[10425]	2022	CALL lbc_lnk( 'iom', z_fld, cdgrd, -1. ) ! Working array for location of northfold
[9019]	2023	!
[5363]	2024	! Cell vertices that can be defined
	2025	DO jj = 2, jpjm1
	2026	DO ji = 2, jpim1
[5415]	2027	z_bnds(1,ji,jj,1) = plat_cnr(ji+icnr, jj+jcnr ) ! Bottom-left
	2028	z_bnds(2,ji,jj,1) = plat_cnr(ji+icnr+1,jj+jcnr ) ! Bottom-right
	2029	z_bnds(3,ji,jj,1) = plat_cnr(ji+icnr+1,jj+jcnr+1) ! Top-right
	2030	z_bnds(4,ji,jj,1) = plat_cnr(ji+icnr, jj+jcnr+1) ! Top-left
	2031	z_bnds(1,ji,jj,2) = plon_cnr(ji+icnr, jj+jcnr ) ! Bottom-left
	2032	z_bnds(2,ji,jj,2) = plon_cnr(ji+icnr+1,jj+jcnr ) ! Bottom-right
	2033	z_bnds(3,ji,jj,2) = plon_cnr(ji+icnr+1,jj+jcnr+1) ! Top-right
	2034	z_bnds(4,ji,jj,2) = plon_cnr(ji+icnr, jj+jcnr+1) ! Top-left
[5363]	2035	END DO
	2036	END DO
[9019]	2037	!
[5363]	2038	! Cell vertices on boundries
	2039	DO jn = 1, 4
[11536]	2040	CALL lbc_lnk( 'iom', z_bnds(jn,:,:,1), cdgrd, 1., pfillval=999._wp )
	2041	CALL lbc_lnk( 'iom', z_bnds(jn,:,:,2), cdgrd, 1., pfillval=999._wp )
[5363]	2042	END DO
[9019]	2043	!
[5415]	2044	! Zero-size cells at closed boundaries if cell points provided,
	2045	! otherwise they are closed cells with unrealistic bounds
	2046	IF( PRESENT(plon_pnt) .AND. PRESENT(plat_pnt) ) THEN
	2047	IF( (nbondi == -1 .OR. nbondi == 2) .AND. .NOT. (jperio == 1 .OR. jperio == 4 .OR. jperio == 6) ) THEN
	2048	DO jn = 1, 4 ! (West or jpni = 1), closed E-W
	2049	z_bnds(jn,1,:,1) = plat_pnt(1,:) ; z_bnds(jn,1,:,2) = plon_pnt(1,:)
	2050	END DO
	2051	ENDIF
	2052	IF( (nbondi == 1 .OR. nbondi == 2) .AND. .NOT. (jperio == 1 .OR. jperio == 4 .OR. jperio == 6) ) THEN
	2053	DO jn = 1, 4 ! (East or jpni = 1), closed E-W
	2054	z_bnds(jn,nlci,:,1) = plat_pnt(nlci,:) ; z_bnds(jn,nlci,:,2) = plon_pnt(nlci,:)
	2055	END DO
	2056	ENDIF
	2057	IF( nbondj == -1 .OR. (nbondj == 2 .AND. jperio /= 2) ) THEN
	2058	DO jn = 1, 4 ! South or (jpnj = 1, not symmetric)
	2059	z_bnds(jn,:,1,1) = plat_pnt(:,1) ; z_bnds(jn,:,1,2) = plon_pnt(:,1)
	2060	END DO
	2061	ENDIF
	2062	IF( (nbondj == 1 .OR. nbondj == 2) .AND. jperio < 3 ) THEN
	2063	DO jn = 1, 4 ! (North or jpnj = 1), no north fold
	2064	z_bnds(jn,:,nlcj,1) = plat_pnt(:,nlcj) ; z_bnds(jn,:,nlcj,2) = plon_pnt(:,nlcj)
	2065	END DO
	2066	ENDIF
[5363]	2067	ENDIF
[9019]	2068	!
	2069	IF( (nbondj == 1 .OR. nbondj == 2) .AND. jperio >= 3 ) THEN ! Rotate cells at the north fold
[5363]	2070	DO jj = 1, jpj
	2071	DO ji = 1, jpi
	2072	IF( z_fld(ji,jj) == -1. ) THEN
	2073	z_rot(1,:) = z_bnds(3,ji,jj,:) ; z_rot(2,:) = z_bnds(4,ji,jj,:)
	2074	z_rot(3,:) = z_bnds(1,ji,jj,:) ; z_rot(4,:) = z_bnds(2,ji,jj,:)
	2075	z_bnds(:,ji,jj,:) = z_rot(:,:)
	2076	ENDIF
	2077	END DO
	2078	END DO
[9019]	2079	ELSE IF( nbondj == 2 .AND. jperio == 2 ) THEN ! Invert cells at the symmetric equator
[5363]	2080	DO ji = 1, jpi
	2081	z_rot(1:2,:) = z_bnds(3:4,ji,1,:)
	2082	z_rot(3:4,:) = z_bnds(1:2,ji,1,:)
	2083	z_bnds(:,ji,1,:) = z_rot(:,:)
	2084	END DO
	2085	ENDIF
[9019]	2086	!
[5363]	2087	CALL iom_set_domain_attr("grid_"//cdgrd, bounds_lat = RESHAPE(z_bnds(:,nldi:nlei,nldj:nlej,1),(/ 4,ni*nj /)), &
[9019]	2088	& bounds_lon = RESHAPE(z_bnds(:,nldi:nlei,nldj:nlej,2),(/ 4,ni*nj /)), nvertex=4 )
	2089	!
[5415]	2090	DEALLOCATE( z_bnds, z_fld, z_rot )
[9019]	2091	!
[5363]	2092	END SUBROUTINE set_grid_bounds
	2093
	2094
[5385]	2095	SUBROUTINE set_grid_znl( plat )
	2096	!!----------------------------------------------------------------------
	2097	!! * ROUTINE set_grid_znl *
	2098	!!
	2099	!! ** Purpose : define grids for zonal mean
	2100	!!
	2101	!!----------------------------------------------------------------------
	2102	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plat
	2103	!
[9019]	2104	INTEGER :: ni, nj, ix, iy
[5385]	2105	REAL(wp), DIMENSION(:), ALLOCATABLE :: zlon
[9019]	2106	!!----------------------------------------------------------------------
	2107	!
	2108	ni=nlei-nldi+1 ! define zonal mean domain (jpj*jpk)
	2109	nj=nlej-nldj+1
	2110	ALLOCATE( zlon(ni*nj) ) ; zlon(:) = 0._wp
	2111	!
[12193]	2112	! CALL dom_ngb( -168.53, 65.03, ix, iy, 'T' ) ! i-line that passes through Bering Strait: Reference latitude (used in plots)
	2113	CALL dom_ngb( 180., 90., ix, iy, 'T' ) ! i-line that passes near the North Pole : Reference latitude (used in plots)
[7646]	2114	CALL iom_set_domain_attr("gznl", ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-2, jbegin=njmpp+nldj-2, ni=ni, nj=nj)
[5385]	2115	CALL iom_set_domain_attr("gznl", data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
	2116	CALL iom_set_domain_attr("gznl", lonvalue = zlon, &
	2117	& latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
[12193]	2118	CALL iom_set_zoom_domain_attr("ptr", ibegin=ix-1, jbegin=0, ni=1, nj=jpjglo)
[5385]	2119	!
	2120	CALL iom_update_file_name('ptr')
	2121	!
	2122	END SUBROUTINE set_grid_znl
	2123
[9019]	2124
[1738]	2125	SUBROUTINE set_scalar
	2126	!!----------------------------------------------------------------------
[4148]	2127	!! * ROUTINE set_scalar *
[1738]	2128	!!
	2129	!! ** Purpose : define fake grids for scalar point
	2130	!!
	2131	!!----------------------------------------------------------------------
[5426]	2132	REAL(wp), DIMENSION(1) :: zz = 1.
[1738]	2133	!!----------------------------------------------------------------------
[9019]	2134	!
[7646]	2135	CALL iom_set_domain_attr('scalarpoint', ni_glo=jpnij, nj_glo=1, ibegin=narea-1, jbegin=0, ni=1, nj=1)
[5426]	2136	CALL iom_set_domain_attr('scalarpoint', data_dim=2, data_ibegin = 1, data_ni = 1, data_jbegin = 1, data_nj = 1)
[9019]	2137	!
	2138	zz = REAL( narea, wp )
[5426]	2139	CALL iom_set_domain_attr('scalarpoint', lonvalue=zz, latvalue=zz)
[9019]	2140	!
[1738]	2141	END SUBROUTINE set_scalar
	2142
	2143
[1725]	2144	SUBROUTINE set_xmlatt
	2145	!!----------------------------------------------------------------------
[4148]	2146	!! * ROUTINE set_xmlatt *
[1725]	2147	!!
	2148	!! ** Purpose : automatic definitions of some of the xml attributs...
	2149	!!
	2150	!!----------------------------------------------------------------------
	2151	CHARACTER(len=1),DIMENSION( 3) :: clgrd ! suffix name
[4148]	2152	CHARACTER(len=256) :: clsuff ! suffix name
[1725]	2153	CHARACTER(len=1) :: cl1 ! 1 character
[5003]	2154	CHARACTER(len=2) :: cl2 ! 2 characters
	2155	CHARACTER(len=3) :: cl3 ! 3 characters
[4148]	2156	INTEGER :: ji, jg ! loop counters
[1725]	2157	INTEGER :: ix, iy ! i-,j- index
	2158	REAL(wp) ,DIMENSION(11) :: zlontao ! longitudes of tao moorings
	2159	REAL(wp) ,DIMENSION( 7) :: zlattao ! latitudes of tao moorings
	2160	REAL(wp) ,DIMENSION( 4) :: zlonrama ! longitudes of rama moorings
	2161	REAL(wp) ,DIMENSION(11) :: zlatrama ! latitudes of rama moorings
	2162	REAL(wp) ,DIMENSION( 3) :: zlonpira ! longitudes of pirata moorings
	2163	REAL(wp) ,DIMENSION( 9) :: zlatpira ! latitudes of pirata moorings
[7646]	2164	TYPE(xios_duration) :: f_op, f_of
[1725]	2165	!!----------------------------------------------------------------------
	2166	!
	2167	! frequency of the call of iom_put (attribut: freq_op)
[9019]	2168	f_op%timestep = 1 ; f_of%timestep = 0 ; CALL iom_set_field_attr('field_definition', freq_op=f_op, freq_offset=f_of)
	2169	f_op%timestep = 2 ; f_of%timestep = 0 ; CALL iom_set_field_attr('trendT_even' , freq_op=f_op, freq_offset=f_of)
	2170	f_op%timestep = 2 ; f_of%timestep = -1 ; CALL iom_set_field_attr('trendT_odd' , freq_op=f_op, freq_offset=f_of)
	2171	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('SBC' , freq_op=f_op, freq_offset=f_of)
	2172	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('SBC_scalar' , freq_op=f_op, freq_offset=f_of)
[12182]	2173	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('ABL' , freq_op=f_op, freq_offset=f_of)
[7646]	2174
[1725]	2175	! output file names (attribut: name)
[4148]	2176	DO ji = 1, 9
	2177	WRITE(cl1,'(i1)') ji
	2178	CALL iom_update_file_name('file'//cl1)
[1725]	2179	END DO
[4148]	2180	DO ji = 1, 99
	2181	WRITE(cl2,'(i2.2)') ji
	2182	CALL iom_update_file_name('file'//cl2)
	2183	END DO
[5003]	2184	DO ji = 1, 999
	2185	WRITE(cl3,'(i3.3)') ji
	2186	CALL iom_update_file_name('file'//cl3)
	2187	END DO
[1725]	2188
	2189	! Zooms...
	2190	clgrd = (/ 'T', 'U', 'W' /)
	2191	DO jg = 1, SIZE(clgrd) ! grid type
	2192	cl1 = clgrd(jg)
	2193	! Equatorial section (attributs: jbegin, ni, name_suffix)
	2194	CALL dom_ngb( 0., 0., ix, iy, cl1 )
[9930]	2195	CALL iom_set_zoom_domain_attr('Eq'//cl1, ibegin=0, jbegin=iy-1, ni=jpiglo, nj=1 )
[4148]	2196	CALL iom_get_file_attr ('Eq'//cl1, name_suffix = clsuff )
	2197	CALL iom_set_file_attr ('Eq'//cl1, name_suffix = TRIM(clsuff)//'_Eq')
	2198	CALL iom_update_file_name('Eq'//cl1)
[1725]	2199	END DO
	2200	! TAO moorings (attributs: ibegin, jbegin, name_suffix)
	2201	zlontao = (/ 137.0, 147.0, 156.0, 165.0, -180.0, -170.0, -155.0, -140.0, -125.0, -110.0, -95.0 /)
	2202	zlattao = (/ -8.0, -5.0, -2.0, 0.0, 2.0, 5.0, 8.0 /)
	2203	CALL set_mooring( zlontao, zlattao )
	2204	! RAMA moorings (attributs: ibegin, jbegin, name_suffix)
	2205	zlonrama = (/ 55.0, 67.0, 80.5, 90.0 /)
	2206	zlatrama = (/ -16.0, -12.0, -8.0, -4.0, -1.5, 0.0, 1.5, 4.0, 8.0, 12.0, 15.0 /)
	2207	CALL set_mooring( zlonrama, zlatrama )
	2208	! PIRATA moorings (attributs: ibegin, jbegin, name_suffix)
	2209	zlonpira = (/ -38.0, -23.0, -10.0 /)
	2210	zlatpira = (/ -19.0, -14.0, -8.0, 0.0, 4.0, 8.0, 12.0, 15.0, 20.0 /)
	2211	CALL set_mooring( zlonpira, zlatpira )
[9019]	2212	!
[1725]	2213	END SUBROUTINE set_xmlatt
	2214
	2215
[9019]	2216	SUBROUTINE set_mooring( plon, plat )
[1725]	2217	!!----------------------------------------------------------------------
[4148]	2218	!! * ROUTINE set_mooring *
[1725]	2219	!!
	2220	!! ** Purpose : automatic definitions of moorings xml attributs...
	2221	!!
	2222	!!----------------------------------------------------------------------
[9019]	2223	REAL(wp), DIMENSION(:), INTENT(in) :: plon, plat ! longitudes/latitudes oft the mooring
[1725]	2224	!
	2225	!!$ CHARACTER(len=1),DIMENSION(4) :: clgrd = (/ 'T', 'U', 'V', 'W' /) ! suffix name
	2226	CHARACTER(len=1),DIMENSION(1) :: clgrd = (/ 'T' /) ! suffix name
[4148]	2227	CHARACTER(len=256) :: clname ! file name
	2228	CHARACTER(len=256) :: clsuff ! suffix name
[1725]	2229	CHARACTER(len=1) :: cl1 ! 1 character
	2230	CHARACTER(len=6) :: clon,clat ! name of longitude, latitude
	2231	INTEGER :: ji, jj, jg ! loop counters
	2232	INTEGER :: ix, iy ! i-,j- index
	2233	REAL(wp) :: zlon, zlat
	2234	!!----------------------------------------------------------------------
	2235	DO jg = 1, SIZE(clgrd)
	2236	cl1 = clgrd(jg)
	2237	DO ji = 1, SIZE(plon)
	2238	DO jj = 1, SIZE(plat)
	2239	zlon = plon(ji)
	2240	zlat = plat(jj)
	2241	! modifications for RAMA moorings
	2242	IF( zlon == 67. .AND. zlat == 15. ) zlon = 65.
	2243	IF( zlon == 90. .AND. zlat <= -4. ) zlon = 95.
	2244	IF( zlon == 95. .AND. zlat == -4. ) zlat = -5.
	2245	! modifications for PIRATA moorings
	2246	IF( zlon == -38. .AND. zlat == -19. ) zlon = -34.
	2247	IF( zlon == -38. .AND. zlat == -14. ) zlon = -32.
	2248	IF( zlon == -38. .AND. zlat == -8. ) zlon = -30.
	2249	IF( zlon == -38. .AND. zlat == 0. ) zlon = -35.
	2250	IF( zlon == -23. .AND. zlat == 20. ) zlat = 21.
	2251	IF( zlon == -10. .AND. zlat == -14. ) zlat = -10.
	2252	IF( zlon == -10. .AND. zlat == -8. ) zlat = -6.
	2253	IF( zlon == -10. .AND. zlat == 4. ) THEN ; zlon = 0. ; zlat = 0. ; ENDIF
	2254	CALL dom_ngb( zlon, zlat, ix, iy, cl1 )
	2255	IF( zlon >= 0. ) THEN
	2256	IF( zlon == REAL(NINT(zlon), wp) ) THEN ; WRITE(clon, '(i3, a)') NINT( zlon), 'e'
	2257	ELSE ; WRITE(clon, '(f5.1,a)') zlon , 'e'
	2258	ENDIF
	2259	ELSE
	2260	IF( zlon == REAL(NINT(zlon), wp) ) THEN ; WRITE(clon, '(i3, a)') NINT(-zlon), 'w'
	2261	ELSE ; WRITE(clon, '(f5.1,a)') -zlon , 'w'
	2262	ENDIF
	2263	ENDIF
	2264	IF( zlat >= 0. ) THEN
	2265	IF( zlat == REAL(NINT(zlat), wp) ) THEN ; WRITE(clat, '(i2, a)') NINT( zlat), 'n'
	2266	ELSE ; WRITE(clat, '(f4.1,a)') zlat , 'n'
	2267	ENDIF
	2268	ELSE
	2269	IF( zlat == REAL(NINT(zlat), wp) ) THEN ; WRITE(clat, '(i2, a)') NINT(-zlat), 's'
	2270	ELSE ; WRITE(clat, '(f4.1,a)') -zlat , 's'
	2271	ENDIF
	2272	ENDIF
	2273	clname = TRIM(ADJUSTL(clat))//TRIM(ADJUSTL(clon))
[9930]	2274	CALL iom_set_zoom_domain_attr(TRIM(clname)//cl1, ibegin= ix-1, jbegin= iy-1, ni=1, nj=1)
[7646]	2275
[4148]	2276	CALL iom_get_file_attr (TRIM(clname)//cl1, name_suffix = clsuff )
	2277	CALL iom_set_file_attr (TRIM(clname)//cl1, name_suffix = TRIM(clsuff)//'_'//TRIM(clname))
	2278	CALL iom_update_file_name(TRIM(clname)//cl1)
[1725]	2279	END DO
	2280	END DO
	2281	END DO
	2282
	2283	END SUBROUTINE set_mooring
	2284
[4148]	2285
	2286	SUBROUTINE iom_update_file_name( cdid )
	2287	!!----------------------------------------------------------------------
	2288	!! * ROUTINE iom_update_file_name *
	2289	!!
	2290	!! ** Purpose :
	2291	!!
	2292	!!----------------------------------------------------------------------
	2293	CHARACTER(LEN=*) , INTENT(in) :: cdid
	2294	!
	2295	CHARACTER(LEN=256) :: clname
	2296	CHARACTER(LEN=20) :: clfreq
	2297	CHARACTER(LEN=20) :: cldate
	2298	INTEGER :: idx
	2299	INTEGER :: jn
	2300	INTEGER :: itrlen
	2301	INTEGER :: iyear, imonth, iday, isec
	2302	REAL(wp) :: zsec
	2303	LOGICAL :: llexist
[7646]	2304	TYPE(xios_duration) :: output_freq
[4148]	2305	!!----------------------------------------------------------------------
[9019]	2306	!
	2307	DO jn = 1, 2
	2308	!
[7646]	2309	output_freq = xios_duration(0,0,0,0,0,0)
	2310	IF( jn == 1 ) CALL iom_get_file_attr( cdid, name = clname, output_freq = output_freq )
[4148]	2311	IF( jn == 2 ) CALL iom_get_file_attr( cdid, name_suffix = clname )
[9019]	2312	!
[4148]	2313	IF ( TRIM(clname) /= '' ) THEN
[9019]	2314	!
[4148]	2315	idx = INDEX(clname,'@expname@') + INDEX(clname,'@EXPNAME@')
	2316	DO WHILE ( idx /= 0 )
	2317	clname = clname(1:idx-1)//TRIM(cexper)//clname(idx+9:LEN_TRIM(clname))
	2318	idx = INDEX(clname,'@expname@') + INDEX(clname,'@EXPNAME@')
	2319	END DO
[9019]	2320	!
[4148]	2321	idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
	2322	DO WHILE ( idx /= 0 )
[7646]	2323	IF ( output_freq%timestep /= 0) THEN
	2324	WRITE(clfreq,'(I18,A2)')INT(output_freq%timestep),'ts'
	2325	itrlen = LEN_TRIM(ADJUSTL(clfreq))
[7764]	2326	ELSE IF ( output_freq%second /= 0 ) THEN
	2327	WRITE(clfreq,'(I19,A1)')INT(output_freq%second),'s'
	2328	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2329	ELSE IF ( output_freq%minute /= 0 ) THEN
[7768]	2330	WRITE(clfreq,'(I18,A2)')INT(output_freq%minute),'mi'
[7764]	2331	itrlen = LEN_TRIM(ADJUSTL(clfreq))
[7646]	2332	ELSE IF ( output_freq%hour /= 0 ) THEN
	2333	WRITE(clfreq,'(I19,A1)')INT(output_freq%hour),'h'
	2334	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2335	ELSE IF ( output_freq%day /= 0 ) THEN
	2336	WRITE(clfreq,'(I19,A1)')INT(output_freq%day),'d'
	2337	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2338	ELSE IF ( output_freq%month /= 0 ) THEN
	2339	WRITE(clfreq,'(I19,A1)')INT(output_freq%month),'m'
	2340	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2341	ELSE IF ( output_freq%year /= 0 ) THEN
	2342	WRITE(clfreq,'(I19,A1)')INT(output_freq%year),'y'
	2343	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2344	ELSE
[4148]	2345	CALL ctl_stop('error in the name of file id '//TRIM(cdid), &
	2346	& ' attribute output_freq is undefined -> cannot replace @freq@ in '//TRIM(clname) )
[7646]	2347	ENDIF
	2348	clname = clname(1:idx-1)//TRIM(ADJUSTL(clfreq))//clname(idx+6:LEN_TRIM(clname))
	2349	idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
[4148]	2350	END DO
[9019]	2351	!
[4148]	2352	idx = INDEX(clname,'@startdate@') + INDEX(clname,'@STARTDATE@')
	2353	DO WHILE ( idx /= 0 )
[6140]	2354	cldate = iom_sdate( fjulday - rdt / rday )
[4148]	2355	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+11:LEN_TRIM(clname))
	2356	idx = INDEX(clname,'@startdate@') + INDEX(clname,'@STARTDATE@')
	2357	END DO
[9019]	2358	!
[4148]	2359	idx = INDEX(clname,'@startdatefull@') + INDEX(clname,'@STARTDATEFULL@')
	2360	DO WHILE ( idx /= 0 )
[6140]	2361	cldate = iom_sdate( fjulday - rdt / rday, ldfull = .TRUE. )
[4148]	2362	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+15:LEN_TRIM(clname))
	2363	idx = INDEX(clname,'@startdatefull@') + INDEX(clname,'@STARTDATEFULL@')
	2364	END DO
[9019]	2365	!
[4148]	2366	idx = INDEX(clname,'@enddate@') + INDEX(clname,'@ENDDATE@')
	2367	DO WHILE ( idx /= 0 )
[6140]	2368	cldate = iom_sdate( fjulday + rdt / rday * REAL( nitend - nit000, wp ), ld24 = .TRUE. )
[4148]	2369	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+9:LEN_TRIM(clname))
	2370	idx = INDEX(clname,'@enddate@') + INDEX(clname,'@ENDDATE@')
	2371	END DO
[9019]	2372	!
[4148]	2373	idx = INDEX(clname,'@enddatefull@') + INDEX(clname,'@ENDDATEFULL@')
	2374	DO WHILE ( idx /= 0 )
[6140]	2375	cldate = iom_sdate( fjulday + rdt / rday * REAL( nitend - nit000, wp ), ld24 = .TRUE., ldfull = .TRUE. )
[4148]	2376	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+13:LEN_TRIM(clname))
	2377	idx = INDEX(clname,'@enddatefull@') + INDEX(clname,'@ENDDATEFULL@')
	2378	END DO
[9019]	2379	!
[12182]	2380	IF( jn == 1 .AND. TRIM(Agrif_CFixed()) /= '0' ) clname = TRIM(Agrif_CFixed())//"_"//TRIM(clname)
[4148]	2381	IF( jn == 1 ) CALL iom_set_file_attr( cdid, name = clname )
	2382	IF( jn == 2 ) CALL iom_set_file_attr( cdid, name_suffix = clname )
[9019]	2383	!
[4148]	2384	ENDIF
[9019]	2385	!
[4148]	2386	END DO
[9019]	2387	!
[4148]	2388	END SUBROUTINE iom_update_file_name
	2389
	2390
	2391	FUNCTION iom_sdate( pjday, ld24, ldfull )
	2392	!!----------------------------------------------------------------------
	2393	!! * ROUTINE iom_sdate *
	2394	!!
	2395	!! ** Purpose : send back the date corresponding to the given julian day
	2396	!!----------------------------------------------------------------------
[9019]	2397	REAL(wp), INTENT(in ) :: pjday ! julian day
	2398	LOGICAL , INTENT(in ), OPTIONAL :: ld24 ! true to force 24:00 instead of 00:00
	2399	LOGICAL , INTENT(in ), OPTIONAL :: ldfull ! true to get the compleate date: yyyymmdd_hh:mm:ss
[4148]	2400	!
	2401	CHARACTER(LEN=20) :: iom_sdate
	2402	CHARACTER(LEN=50) :: clfmt ! format used to write the date
	2403	INTEGER :: iyear, imonth, iday, ihour, iminute, isec
	2404	REAL(wp) :: zsec
	2405	LOGICAL :: ll24, llfull
[9019]	2406	!!----------------------------------------------------------------------
[4148]	2407	!
	2408	IF( PRESENT(ld24) ) THEN ; ll24 = ld24
	2409	ELSE ; ll24 = .FALSE.
	2410	ENDIF
[9019]	2411	!
[4148]	2412	IF( PRESENT(ldfull) ) THEN ; llfull = ldfull
	2413	ELSE ; llfull = .FALSE.
	2414	ENDIF
[9019]	2415	!
[4148]	2416	CALL ju2ymds( pjday, iyear, imonth, iday, zsec )
	2417	isec = NINT(zsec)
[9019]	2418	!
[4148]	2419	IF ( ll24 .AND. isec == 0 ) THEN ! 00:00 of the next day -> move to 24:00 of the current day
	2420	CALL ju2ymds( pjday - 1., iyear, imonth, iday, zsec )
	2421	isec = 86400
	2422	ENDIF
[9019]	2423	!
[4148]	2424	IF( iyear < 10000 ) THEN ; clfmt = "i4.4,2i2.2" ! format used to write the date
	2425	ELSE ; WRITE(clfmt, "('i',i1,',2i2.2')") INT(LOG10(REAL(iyear,wp))) + 1
	2426	ENDIF
[9019]	2427	!
[5656]	2428	!$AGRIF_DO_NOT_TREAT
[9019]	2429	! needed in the conv
[4148]	2430	IF( llfull ) THEN
	2431	clfmt = TRIM(clfmt)//",'_',i2.2,':',i2.2,':',i2.2"
	2432	ihour = isec / 3600
	2433	isec = MOD(isec, 3600)
	2434	iminute = isec / 60
	2435	isec = MOD(isec, 60)
	2436	WRITE(iom_sdate, '('//TRIM(clfmt)//')') iyear, imonth, iday, ihour, iminute, isec ! date of the end of run
	2437	ELSE
	2438	WRITE(iom_sdate, '('//TRIM(clfmt)//')') iyear, imonth, iday ! date of the end of run
	2439	ENDIF
[5656]	2440	!$AGRIF_END_DO_NOT_TREAT
[9019]	2441	!
[4148]	2442	END FUNCTION iom_sdate
	2443
[1359]	2444	#else
[9019]	2445	!!----------------------------------------------------------------------
	2446	!! NOT 'key_iomput' a few dummy routines
	2447	!!----------------------------------------------------------------------
[4152]	2448	SUBROUTINE iom_setkt( kt, cdname )
	2449	INTEGER , INTENT(in):: kt
	2450	CHARACTER(LEN=*), INTENT(in) :: cdname
	2451	IF( .FALSE. ) WRITE(numout,*) kt, cdname ! useless test to avoid compilation warnings
[1359]	2452	END SUBROUTINE iom_setkt
	2453
[4152]	2454	SUBROUTINE iom_context_finalize( cdname )
	2455	CHARACTER(LEN=*), INTENT(in) :: cdname
	2456	IF( .FALSE. ) WRITE(numout,*) cdname ! useless test to avoid compilation warnings
	2457	END SUBROUTINE iom_context_finalize
	2458
[1359]	2459	#endif
[4689]	2460
	2461	LOGICAL FUNCTION iom_use( cdname )
	2462	CHARACTER(LEN=*), INTENT(in) :: cdname
	2463	#if defined key_iomput
	2464	iom_use = xios_field_is_active( cdname )
	2465	#else
	2466	iom_use = .FALSE.
	2467	#endif
	2468	END FUNCTION iom_use
[11536]	2469
	2470	SUBROUTINE iom_miss_val( cdname, pmiss_val )
	2471	CHARACTER(LEN=*), INTENT(in ) :: cdname
	2472	REAL(wp) , INTENT(out) :: pmiss_val
	2473	#if defined key_iomput
	2474	! get missing value
	2475	CALL xios_get_field_attr( cdname, default_value = pmiss_val )
	2476	#else
	2477	IF( .FALSE. ) WRITE(numout,*) cdname, pmiss_val ! useless test to avoid compilation warnings
	2478	#endif
	2479	END SUBROUTINE iom_miss_val
	2480
[544]	2481	!!======================================================================
	2482	END MODULE iom

Note: See TracBrowser for help on using the repository browser.

Download in other formats: