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iom.F90 in NEMO/branches/2019/dev_r12072_MERGE_OPTION2_2019/src/OCE/IOM – NEMO

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source: NEMO/branches/2019/dev_r12072_MERGE_OPTION2_2019/src/OCE/IOM/iom.F90 @ 12154

Last change on this file since 12154 was 12154, checked in by cetlod, 4 years ago
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[544]	1	MODULE iom
[9019]	2	!!======================================================================
[544]	3	!! * MODULE iom *
	4	!! Input/Output manager : Library to read input files
[9019]	5	!!======================================================================
[3764]	6	!! History : 2.0 ! 2005-12 (J. Belier) Original code
	7	!! 2.0 ! 2006-02 (S. Masson) Adaptation to NEMO
	8	!! 3.0 ! 2007-07 (D. Storkey) Changes to iom_gettime
	9	!! 3.4 ! 2012-12 (R. Bourdalle-Badie and G. Reffray) add C1D case
[6140]	10	!! 3.6 ! 2014-15 DIMG format removed
[7646]	11	!! 3.6 ! 2015-15 (J. Harle) Added procedure to read REAL attributes
[9019]	12	!! 4.0 ! 2017-11 (M. Andrejczuk) Extend IOM interface to write any 3D fields
	13	!!----------------------------------------------------------------------
[544]	14
[9019]	15	!!----------------------------------------------------------------------
[544]	16	!! iom_open : open a file read only
	17	!! iom_close : close a file or all files opened by iom
	18	!! iom_get : read a field (interfaced to several routines)
	19	!! iom_varid : get the id of a variable in a file
	20	!! iom_rstput : write a field in a restart file (interfaced to several routines)
[9019]	21	!!----------------------------------------------------------------------
[544]	22	USE dom_oce ! ocean space and time domain
[3764]	23	USE c1d ! 1D vertical configuration
[3294]	24	USE flo_oce ! floats module declarations
[679]	25	USE lbclnk ! lateal boundary condition / mpp exchanges
[544]	26	USE iom_def ! iom variables definitions
	27	USE iom_nf90 ! NetCDF format with native NetCDF library
[2715]	28	USE in_out_manager ! I/O manager
	29	USE lib_mpp ! MPP library
[1412]	30	#if defined key_iomput
[12154]	31	USE sbc_oce , ONLY : nn_fsbc, ght_abl, ghw_abl, e3t_abl, e3w_abl, jpka, jpkam1
[9019]	32	USE trc_oce , ONLY : nn_dttrc ! !: frequency of step on passive tracers
	33	USE icb_oce , ONLY : nclasses, class_num ! !: iceberg classes
[9570]	34	#if defined key_si3
[9019]	35	USE ice , ONLY : jpl
[4691]	36	#endif
[1725]	37	USE domngb ! ocean space and time domain
	38	USE phycst ! physical constants
	39	USE dianam ! build name of file
[3695]	40	USE xios
[1359]	41	# endif
[4148]	42	USE ioipsl, ONLY : ju2ymds ! for calendar
[4152]	43	USE crs ! Grid coarsening
[10222]	44	#if defined key_top
	45	USE trc, ONLY : profsed
	46	#endif
[9367]	47	USE lib_fortran
	48	USE diurnal_bulk, ONLY : ln_diurnal_only, ln_diurnal
[1359]	49
[544]	50	IMPLICIT NONE
[556]	51	PUBLIC ! must be public to be able to access iom_def through iom
[550]	52
[1457]	53	#if defined key_iomput
[1725]	54	LOGICAL, PUBLIC, PARAMETER :: lk_iomput = .TRUE. !: iom_put flag
[1457]	55	#else
	56	LOGICAL, PUBLIC, PARAMETER :: lk_iomput = .FALSE. !: iom_put flag
	57	#endif
[12109]	58	PUBLIC iom_init, iom_swap, iom_open, iom_close, iom_setkt, iom_varid, iom_get, iom_get_var
[10522]	59	PUBLIC iom_chkatt, iom_getatt, iom_putatt, iom_getszuld, iom_rstput, iom_delay_rst, iom_put
[11536]	60	PUBLIC iom_use, iom_context_finalize, iom_miss_val
[544]	61
[752]	62	PRIVATE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d
	63	PRIVATE iom_g0d, iom_g1d, iom_g2d, iom_g3d, iom_get_123d
[12109]	64	PRIVATE iom_p1d, iom_p2d, iom_p3d, iom_p4d
[1412]	65	#if defined key_iomput
[4148]	66	PRIVATE iom_set_domain_attr, iom_set_axis_attr, iom_set_field_attr, iom_set_file_attr, iom_get_file_attr, iom_set_grid_attr
[5363]	67	PRIVATE set_grid, set_grid_bounds, set_scalar, set_xmlatt, set_mooring, iom_update_file_name, iom_sdate
[9367]	68	PRIVATE iom_set_rst_context, iom_set_rstw_active, iom_set_rstr_active
[1359]	69	# endif
[9535]	70	PUBLIC iom_set_rstw_var_active, iom_set_rstw_core, iom_set_rst_vars
[752]	71
[544]	72	INTERFACE iom_get
[550]	73	MODULE PROCEDURE iom_g0d, iom_g1d, iom_g2d, iom_g3d
[544]	74	END INTERFACE
[2528]	75	INTERFACE iom_getatt
[10425]	76	MODULE PROCEDURE iom_g0d_iatt, iom_g1d_iatt, iom_g0d_ratt, iom_g1d_ratt, iom_g0d_catt
[2528]	77	END INTERFACE
[7646]	78	INTERFACE iom_putatt
[10425]	79	MODULE PROCEDURE iom_p0d_iatt, iom_p1d_iatt, iom_p0d_ratt, iom_p1d_ratt, iom_p0d_catt
[7646]	80	END INTERFACE
[544]	81	INTERFACE iom_rstput
[550]	82	MODULE PROCEDURE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d
[544]	83	END INTERFACE
[9802]	84	INTERFACE iom_put
[12109]	85	MODULE PROCEDURE iom_p0d, iom_p1d, iom_p2d, iom_p3d, iom_p4d
[9802]	86	END INTERFACE iom_put
	87
[544]	88	!!----------------------------------------------------------------------
[9598]	89	!! NEMO/OCE 4.0 , NEMO Consortium (2018)
[1152]	90	!! $Id$
[10068]	91	!! Software governed by the CeCILL license (see ./LICENSE)
[544]	92	!!----------------------------------------------------------------------
	93	CONTAINS
	94
[9903]	95	SUBROUTINE iom_init( cdname, fname, ld_tmppatch )
[1359]	96	!!----------------------------------------------------------------------
	97	!! * ROUTINE *
	98	!!
	99	!! ** Purpose :
	100	!!
	101	!!----------------------------------------------------------------------
[9903]	102	CHARACTER(len=*), INTENT(in) :: cdname
[9367]	103	CHARACTER(len=*), OPTIONAL, INTENT(in) :: fname
[9903]	104	LOGICAL , OPTIONAL, INTENT(in) :: ld_tmppatch
[1412]	105	#if defined key_iomput
[9019]	106	!
[7646]	107	TYPE(xios_duration) :: dtime = xios_duration(0, 0, 0, 0, 0, 0)
	108	TYPE(xios_date) :: start_date
[9367]	109	CHARACTER(len=lc) :: clname
[12109]	110	INTEGER :: irefyear, irefmonth, irefday
[7646]	111	INTEGER :: ji, jkmin
[9367]	112	LOGICAL :: llrst_context ! is context related to restart
[5415]	113	!
[7646]	114	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: zt_bnds, zw_bnds
[12154]	115	REAL(wp), DIMENSION(2,jpkam1) :: za_bnds ! ABL vertical boundaries
[9903]	116	LOGICAL :: ll_tmppatch = .TRUE. !: seb: patch before we remove periodicity
	117	INTEGER :: nldi_save, nlei_save !: and close boundaries in output files
	118	INTEGER :: nldj_save, nlej_save !:
[1359]	119	!!----------------------------------------------------------------------
[9019]	120	!
[9802]	121	! seb: patch before we remove periodicity and close boundaries in output files
[9903]	122	IF( PRESENT(ld_tmppatch) ) THEN ; ll_tmppatch = ld_tmppatch
	123	ELSE ; ll_tmppatch = .TRUE.
	124	ENDIF
	125	IF ( ll_tmppatch ) THEN
[9802]	126	nldi_save = nldi ; nlei_save = nlei
	127	nldj_save = nldj ; nlej_save = nlej
	128	IF( nimpp == 1 ) nldi = 1
	129	IF( nimpp + jpi - 1 == jpiglo ) nlei = jpi
	130	IF( njmpp == 1 ) nldj = 1
	131	IF( njmpp + jpj - 1 == jpjglo ) nlej = jpj
	132	ENDIF
	133	!
[7646]	134	ALLOCATE( zt_bnds(2,jpk), zw_bnds(2,jpk) )
[9019]	135	!
[4152]	136	clname = cdname
	137	IF( TRIM(Agrif_CFixed()) /= '0' ) clname = TRIM(Agrif_CFixed())//"_"//TRIM(cdname)
[9570]	138	CALL xios_context_initialize(TRIM(clname), mpi_comm_oce)
[4152]	139	CALL iom_swap( cdname )
[9367]	140	llrst_context = (TRIM(cdname) == TRIM(crxios_context) .OR. TRIM(cdname) == TRIM(cwxios_context))
[1359]	141
[7646]	142	! Calendar type is now defined in xml file
[12109]	143	IF (.NOT.(xios_getvar('ref_year' ,irefyear ))) irefyear = 1900
	144	IF (.NOT.(xios_getvar('ref_month',irefmonth))) irefmonth = 01
	145	IF (.NOT.(xios_getvar('ref_day' ,irefday ))) irefday = 01
	146
[1725]	147	SELECT CASE ( nleapy ) ! Choose calendar for IOIPSL
[12109]	148	CASE ( 1) ; CALL xios_define_calendar( TYPE = "Gregorian", time_origin = xios_date(irefyear,irefmonth,irefday,00,00,00), &
[7646]	149	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
[12109]	150	CASE ( 0) ; CALL xios_define_calendar( TYPE = "NoLeap" , time_origin = xios_date(irefyear,irefmonth,irefday,00,00,00), &
[7646]	151	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
[12109]	152	CASE (30) ; CALL xios_define_calendar( TYPE = "D360" , time_origin = xios_date(irefyear,irefmonth,irefday,00,00,00), &
[7646]	153	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
[1725]	154	END SELECT
[1359]	155
	156	! horizontal grid definition
[9367]	157	IF(.NOT.llrst_context) CALL set_scalar
[9019]	158	!
[5407]	159	IF( TRIM(cdname) == TRIM(cxios_context) ) THEN
[9984]	160	CALL set_grid( "T", glamt, gphit, .FALSE., .FALSE. )
	161	CALL set_grid( "U", glamu, gphiu, .FALSE., .FALSE. )
	162	CALL set_grid( "V", glamv, gphiv, .FALSE., .FALSE. )
	163	CALL set_grid( "W", glamt, gphit, .FALSE., .FALSE. )
[5385]	164	CALL set_grid_znl( gphit )
[5415]	165	!
	166	IF( ln_cfmeta ) THEN ! Add additional grid metadata
[5836]	167	CALL iom_set_domain_attr("grid_T", area = e1e2t(nldi:nlei, nldj:nlej))
	168	CALL iom_set_domain_attr("grid_U", area = e1e2u(nldi:nlei, nldj:nlej))
	169	CALL iom_set_domain_attr("grid_V", area = e1e2v(nldi:nlei, nldj:nlej))
	170	CALL iom_set_domain_attr("grid_W", area = e1e2t(nldi:nlei, nldj:nlej))
[5415]	171	CALL set_grid_bounds( "T", glamf, gphif, glamt, gphit )
	172	CALL set_grid_bounds( "U", glamv, gphiv, glamu, gphiu )
	173	CALL set_grid_bounds( "V", glamu, gphiu, glamv, gphiv )
	174	CALL set_grid_bounds( "W", glamf, gphif, glamt, gphit )
	175	ENDIF
[4152]	176	ENDIF
[9019]	177	!
[5407]	178	IF( TRIM(cdname) == TRIM(cxios_context)//"_crs" ) THEN
[4152]	179	CALL dom_grid_crs ! Save the parent grid information & Switch to coarse grid domain
	180	!
[9984]	181	CALL set_grid( "T", glamt_crs, gphit_crs, .FALSE., .FALSE. )
	182	CALL set_grid( "U", glamu_crs, gphiu_crs, .FALSE., .FALSE. )
	183	CALL set_grid( "V", glamv_crs, gphiv_crs, .FALSE., .FALSE. )
	184	CALL set_grid( "W", glamt_crs, gphit_crs, .FALSE., .FALSE. )
[5385]	185	CALL set_grid_znl( gphit_crs )
[4152]	186	!
	187	CALL dom_grid_glo ! Return to parent grid domain
[5415]	188	!
[9367]	189	IF( ln_cfmeta .AND. .NOT. llrst_context) THEN ! Add additional grid metadata
[5415]	190	CALL iom_set_domain_attr("grid_T", area = e1e2t_crs(nldi:nlei, nldj:nlej))
	191	CALL iom_set_domain_attr("grid_U", area = e1u_crs(nldi:nlei, nldj:nlej) * e2u_crs(nldi:nlei, nldj:nlej))
	192	CALL iom_set_domain_attr("grid_V", area = e1v_crs(nldi:nlei, nldj:nlej) * e2v_crs(nldi:nlei, nldj:nlej))
	193	CALL iom_set_domain_attr("grid_W", area = e1e2t_crs(nldi:nlei, nldj:nlej))
	194	CALL set_grid_bounds( "T", glamf_crs, gphif_crs, glamt_crs, gphit_crs )
	195	CALL set_grid_bounds( "U", glamv_crs, gphiv_crs, glamu_crs, gphiu_crs )
	196	CALL set_grid_bounds( "V", glamu_crs, gphiu_crs, glamv_crs, gphiv_crs )
	197	CALL set_grid_bounds( "W", glamf_crs, gphif_crs, glamt_crs, gphit_crs )
	198	ENDIF
[4152]	199	ENDIF
[9019]	200	!
[1359]	201	! vertical grid definition
[9367]	202	IF(.NOT.llrst_context) THEN
[12154]	203	CALL iom_set_axis_attr( "deptht", paxis = gdept_1d )
	204	CALL iom_set_axis_attr( "depthu", paxis = gdept_1d )
	205	CALL iom_set_axis_attr( "depthv", paxis = gdept_1d )
	206	CALL iom_set_axis_attr( "depthw", paxis = gdepw_1d )
[9367]	207
[12154]	208	! ABL
	209	IF( .NOT. ALLOCATED(ght_abl) ) THEN ! force definition for xml files (xios)
	210	ALLOCATE( ght_abl(jpka), ghw_abl(jpka), e3t_abl(jpka), e3w_abl(jpka) ) ! default allocation needed by iom
	211	ght_abl(:) = -1._wp ; ghw_abl(:) = -1._wp
	212	e3t_abl(:) = -1._wp ; e3w_abl(:) = -1._wp
	213	ENDIF
	214	CALL iom_set_axis_attr( "ght_abl", ght_abl(2:jpka) )
	215	CALL iom_set_axis_attr( "ghw_abl", ghw_abl(2:jpka) )
	216
[9367]	217	! Add vertical grid bounds
	218	jkmin = MIN(2,jpk) ! in case jpk=1 (i.e. sas2D)
	219	zt_bnds(2,: ) = gdept_1d(:)
	220	zt_bnds(1,jkmin:jpk) = gdept_1d(1:jpkm1)
	221	zt_bnds(1,1 ) = gdept_1d(1) - e3w_1d(1)
	222	zw_bnds(1,: ) = gdepw_1d(:)
	223	zw_bnds(2,1:jpkm1 ) = gdepw_1d(jkmin:jpk)
	224	zw_bnds(2,jpk: ) = gdepw_1d(jpk) + e3t_1d(jpk)
[12154]	225	CALL iom_set_axis_attr( "deptht", bounds=zw_bnds )
	226	CALL iom_set_axis_attr( "depthu", bounds=zw_bnds )
	227	CALL iom_set_axis_attr( "depthv", bounds=zw_bnds )
	228	CALL iom_set_axis_attr( "depthw", bounds=zt_bnds )
	229
	230	! ABL
	231	za_bnds(1,:) = ghw_abl(1:jpkam1)
	232	za_bnds(2,:) = ghw_abl(2:jpka )
	233	CALL iom_set_axis_attr( "ght_abl", bounds=za_bnds )
	234	za_bnds(1,:) = ght_abl(2:jpka )
	235	za_bnds(2,:) = ght_abl(2:jpka ) + e3w_abl(2:jpka)
	236	CALL iom_set_axis_attr( "ghw_abl", bounds=za_bnds )
	237
[9580]	238	CALL iom_set_axis_attr( "nfloat", (/ (REAL(ji,wp), ji=1,jpnfl) /) )
[9570]	239	# if defined key_si3
[9367]	240	CALL iom_set_axis_attr( "ncatice", (/ (REAL(ji,wp), ji=1,jpl) /) )
	241	! SIMIP diagnostics (4 main arctic straits)
	242	CALL iom_set_axis_attr( "nstrait", (/ (REAL(ji,wp), ji=1,4) /) )
[9019]	243	# endif
[10222]	244	#if defined key_top
[10817]	245	IF( ALLOCATED(profsed) ) CALL iom_set_axis_attr( "profsed", paxis = profsed )
[10222]	246	#endif
[9367]	247	CALL iom_set_axis_attr( "icbcla", class_num )
[10817]	248	CALL iom_set_axis_attr( "iax_20C", (/ REAL(20,wp) /) ) ! strange syntaxe and idea...
[12109]	249	CALL iom_set_axis_attr( "iax_26C", (/ REAL(26,wp) /) ) ! strange syntaxe and idea...
[10817]	250	CALL iom_set_axis_attr( "iax_28C", (/ REAL(28,wp) /) ) ! strange syntaxe and idea...
[12109]	251	CALL iom_set_axis_attr( "basin" , (/ (REAL(ji,wp), ji=1,5) /) )
[9367]	252	ENDIF
	253	!
[1725]	254	! automatic definitions of some of the xml attributs
[9367]	255	IF( TRIM(cdname) == TRIM(crxios_context) ) THEN
	256	!set names of the fields in restart file IF using XIOS to read data
[9984]	257	CALL iom_set_rst_context(.TRUE.)
[9367]	258	CALL iom_set_rst_vars(rst_rfields)
	259	!set which fields are to be read from restart file
	260	CALL iom_set_rstr_active()
	261	ELSE IF( TRIM(cdname) == TRIM(cwxios_context) ) THEN
	262	!set names of the fields in restart file IF using XIOS to write data
[9984]	263	CALL iom_set_rst_context(.FALSE.)
[9367]	264	CALL iom_set_rst_vars(rst_wfields)
	265	!set which fields are to be written to a restart file
	266	CALL iom_set_rstw_active(fname)
	267	ELSE
	268	CALL set_xmlatt
	269	ENDIF
[9019]	270	!
[1359]	271	! end file definition
[4148]	272	dtime%second = rdt
[9019]	273	CALL xios_set_timestep( dtime )
[4148]	274	CALL xios_close_context_definition()
[9019]	275	CALL xios_update_calendar( 0 )
	276	!
[7646]	277	DEALLOCATE( zt_bnds, zw_bnds )
[9019]	278	!
[9903]	279	IF ( ll_tmppatch ) THEN
[9802]	280	nldi = nldi_save ; nlei = nlei_save
	281	nldj = nldj_save ; nlej = nlej_save
	282	ENDIF
[1359]	283	#endif
[9019]	284	!
[1359]	285	END SUBROUTINE iom_init
	286
[9367]	287	SUBROUTINE iom_set_rstw_var_active(field)
	288	!!---------------------------------------------------------------------
	289	!! * SUBROUTINE iom_set_rstw_var_active *
	290	!!
	291	!! ** Purpose : enable variable in restart file when writing with XIOS
	292	!!---------------------------------------------------------------------
	293	CHARACTER(len = *), INTENT(IN) :: field
	294	INTEGER :: i
	295	LOGICAL :: llis_set
[9535]	296	CHARACTER(LEN=256) :: clinfo ! info character
[1359]	297
[9535]	298	#if defined key_iomput
[9367]	299	llis_set = .FALSE.
	300
	301	DO i = 1, max_rst_fields
	302	IF(TRIM(rst_wfields(i)%vname) == field) THEN
	303	rst_wfields(i)%active = .TRUE.
	304	llis_set = .TRUE.
	305	EXIT
	306	ENDIF
	307	ENDDO
	308	!Warn if variable is not in defined in rst_wfields
	309	IF(.NOT.llis_set) THEN
[10425]	310	WRITE(ctmp1,*) 'iom_set_rstw_var_active: variable ', field ,' is available for writing but not defined'
	311	CALL ctl_stop( 'iom_set_rstw_var_active:', ctmp1 )
[9367]	312	ENDIF
[9535]	313	#else
[9536]	314	clinfo = 'iom_set_rstw_var_active: key_iomput is needed to use XIOS restart read/write functionality'
	315	CALL ctl_stop('STOP', TRIM(clinfo))
[9535]	316	#endif
[9367]	317
	318	END SUBROUTINE iom_set_rstw_var_active
	319
	320	SUBROUTINE iom_set_rstr_active()
	321	!!---------------------------------------------------------------------
	322	!! * SUBROUTINE iom_set_rstr_active *
	323	!!
	324	!! ** Purpose : define file name in XIOS context for reading restart file,
	325	!! enable variables present in restart file for reading with XIOS
	326	!!---------------------------------------------------------------------
	327
	328	!sets enabled = .TRUE. for each field in restart file
	329	CHARACTER(len=256) :: rst_file
[9535]	330
	331	#if defined key_iomput
[9367]	332	TYPE(xios_field) :: field_hdl
	333	TYPE(xios_file) :: file_hdl
	334	TYPE(xios_filegroup) :: filegroup_hdl
	335	INTEGER :: i
	336	CHARACTER(lc) :: clpath
	337
	338	clpath = TRIM(cn_ocerst_indir)
	339	IF( clpath(LEN_TRIM(clpath):) /= '/' ) clpath = TRIM(clpath) // '/'
	340	IF( TRIM(Agrif_CFixed()) == '0' ) THEN
	341	rst_file = TRIM(clpath)//TRIM(cn_ocerst_in)
	342	ELSE
	343	rst_file = TRIM(clpath)//'1_'//TRIM(cn_ocerst_in)
	344	ENDIF
	345	!set name of the restart file and enable available fields
	346	if(lwp) WRITE(numout,*) 'Setting restart filename (for XIOS) to: ',rst_file
	347	CALL xios_get_handle("file_definition", filegroup_hdl )
	348	CALL xios_add_child(filegroup_hdl, file_hdl, 'rrestart')
	349	CALL xios_set_file_attr( "rrestart", name=trim(rst_file), type="one_file", &
	350	par_access="collective", enabled=.TRUE., mode="read", &
	351	output_freq=xios_timestep)
	352	!define variables for restart context
	353	DO i = 1, max_rst_fields
	354	IF( TRIM(rst_rfields(i)%vname) /= "NO_NAME") THEN
	355	IF( iom_varid( numror, TRIM(rst_rfields(i)%vname), ldstop = .FALSE. ) > 0 ) THEN
	356	CALL xios_add_child(file_hdl, field_hdl, TRIM(rst_rfields(i)%vname))
	357	SELECT CASE (TRIM(rst_rfields(i)%grid))
	358	CASE ("grid_N_3D")
	359	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	360	domain_ref="grid_N", axis_ref="nav_lev", operation = "instant")
	361	CASE ("grid_N")
	362	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	363	domain_ref="grid_N", operation = "instant")
	364	CASE ("grid_vector")
	365	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	366	axis_ref="nav_lev", operation = "instant")
	367	CASE ("grid_scalar")
	368	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	369	scalar_ref = "grid_scalar", operation = "instant")
	370	END SELECT
	371	IF(lwp) WRITE(numout,*) 'XIOS read: ', TRIM(rst_rfields(i)%vname), ' enabled in ', TRIM(rst_file)
	372	ENDIF
	373	ENDIF
	374	END DO
[9535]	375	#endif
[9367]	376	END SUBROUTINE iom_set_rstr_active
	377
	378	SUBROUTINE iom_set_rstw_core(cdmdl)
	379	!!---------------------------------------------------------------------
	380	!! * SUBROUTINE iom_set_rstw_core *
	381	!!
	382	!! ** Purpose : set variables which are always in restart file
	383	!!---------------------------------------------------------------------
	384	CHARACTER (len=*), INTENT (IN) :: cdmdl ! model OPA or SAS
[9535]	385	CHARACTER(LEN=256) :: clinfo ! info character
	386	#if defined key_iomput
[9367]	387	IF(cdmdl == "OPA") THEN
	388	!from restart.F90
	389	CALL iom_set_rstw_var_active("rdt")
	390	IF ( .NOT. ln_diurnal_only ) THEN
	391	CALL iom_set_rstw_var_active('ub' )
	392	CALL iom_set_rstw_var_active('vb' )
	393	CALL iom_set_rstw_var_active('tb' )
	394	CALL iom_set_rstw_var_active('sb' )
	395	CALL iom_set_rstw_var_active('sshb')
	396	!
	397	CALL iom_set_rstw_var_active('un' )
	398	CALL iom_set_rstw_var_active('vn' )
	399	CALL iom_set_rstw_var_active('tn' )
	400	CALL iom_set_rstw_var_active('sn' )
	401	CALL iom_set_rstw_var_active('sshn')
	402	CALL iom_set_rstw_var_active('rhop')
	403	! extra variable needed for the ice sheet coupling
	404	IF ( ln_iscpl ) THEN
	405	CALL iom_set_rstw_var_active('tmask')
	406	CALL iom_set_rstw_var_active('umask')
	407	CALL iom_set_rstw_var_active('vmask')
	408	CALL iom_set_rstw_var_active('smask')
	409	CALL iom_set_rstw_var_active('e3t_n')
	410	CALL iom_set_rstw_var_active('e3u_n')
	411	CALL iom_set_rstw_var_active('e3v_n')
	412	CALL iom_set_rstw_var_active('gdepw_n')
	413	END IF
	414	ENDIF
	415	IF(ln_diurnal) CALL iom_set_rstw_var_active('Dsst')
	416	!from trasbc.F90
	417	CALL iom_set_rstw_var_active('sbc_hc_b')
	418	CALL iom_set_rstw_var_active('sbc_sc_b')
	419	ENDIF
[9535]	420	#else
[9536]	421	clinfo = 'iom_set_rstw_core: key_iomput is needed to use XIOS restart read/write functionality'
	422	CALL ctl_stop('STOP', TRIM(clinfo))
[9535]	423	#endif
[9367]	424	END SUBROUTINE iom_set_rstw_core
	425
	426	SUBROUTINE iom_set_rst_vars(fields)
	427	!!---------------------------------------------------------------------
[9535]	428	!! * SUBROUTINE iom_set_rst_vars *
[9367]	429	!!
	430	!! ** Purpose : Fill array fields with the information about all
	431	!! possible variables and corresponding grids definition
	432	!! for reading/writing restart with XIOS
	433	!!---------------------------------------------------------------------
	434	TYPE(RST_FIELD), INTENT(INOUT) :: fields(max_rst_fields)
[9535]	435	INTEGER :: i
[9367]	436
	437	i = 0
	438	i = i + 1; fields(i)%vname="rdt"; fields(i)%grid="grid_scalar"
	439	i = i + 1; fields(i)%vname="un"; fields(i)%grid="grid_N_3D"
	440	i = i + 1; fields(i)%vname="ub"; fields(i)%grid="grid_N_3D"
	441	i = i + 1; fields(i)%vname="vn"; fields(i)%grid="grid_N_3D"
	442	i = i + 1; fields(i)%vname="vb"; fields(i)%grid="grid_N_3D"
	443	i = i + 1; fields(i)%vname="tn"; fields(i)%grid="grid_N_3D"
	444	i = i + 1; fields(i)%vname="tb"; fields(i)%grid="grid_N_3D"
	445	i = i + 1; fields(i)%vname="sn"; fields(i)%grid="grid_N_3D"
	446	i = i + 1; fields(i)%vname="sb"; fields(i)%grid="grid_N_3D"
	447	i = i + 1; fields(i)%vname="sshn"; fields(i)%grid="grid_N"
	448	i = i + 1; fields(i)%vname="sshb"; fields(i)%grid="grid_N"
	449	i = i + 1; fields(i)%vname="rhop"; fields(i)%grid="grid_N_3D"
	450	i = i + 1; fields(i)%vname="kt"; fields(i)%grid="grid_scalar"
	451	i = i + 1; fields(i)%vname="ndastp"; fields(i)%grid="grid_scalar"
	452	i = i + 1; fields(i)%vname="adatrj"; fields(i)%grid="grid_scalar"
	453	i = i + 1; fields(i)%vname="utau_b"; fields(i)%grid="grid_N"
	454	i = i + 1; fields(i)%vname="vtau_b"; fields(i)%grid="grid_N"
	455	i = i + 1; fields(i)%vname="qns_b"; fields(i)%grid="grid_N"
	456	i = i + 1; fields(i)%vname="emp_b"; fields(i)%grid="grid_N"
	457	i = i + 1; fields(i)%vname="sfx_b"; fields(i)%grid="grid_N"
	458	i = i + 1; fields(i)%vname="en" ; fields(i)%grid="grid_N_3D"
	459	i = i + 1; fields(i)%vname="avt_k"; fields(i)%grid="grid_N_3D"
	460	i = i + 1; fields(i)%vname="avm_k"; fields(i)%grid="grid_N_3D"
	461	i = i + 1; fields(i)%vname="dissl"; fields(i)%grid="grid_N_3D"
	462	i = i + 1; fields(i)%vname="sbc_hc_b"; fields(i)%grid="grid_N"
	463	i = i + 1; fields(i)%vname="sbc_sc_b"; fields(i)%grid="grid_N"
	464	i = i + 1; fields(i)%vname="qsr_hc_b"; fields(i)%grid="grid_N_3D"
	465	i = i + 1; fields(i)%vname="fraqsr_1lev"; fields(i)%grid="grid_N"
	466	i = i + 1; fields(i)%vname="greenland_icesheet_mass"
	467	fields(i)%grid="grid_scalar"
	468	i = i + 1; fields(i)%vname="greenland_icesheet_timelapsed"
	469	fields(i)%grid="grid_scalar"
	470	i = i + 1; fields(i)%vname="greenland_icesheet_mass_roc"
	471	fields(i)%grid="grid_scalar"
	472	i = i + 1; fields(i)%vname="antarctica_icesheet_mass"
	473	fields(i)%grid="grid_scalar"
	474	i = i + 1; fields(i)%vname="antarctica_icesheet_timelapsed"
	475	fields(i)%grid="grid_scalar"
	476	i = i + 1; fields(i)%vname="antarctica_icesheet_mass_roc"
	477	fields(i)%grid="grid_scalar"
	478	i = i + 1; fields(i)%vname="frc_v"; fields(i)%grid="grid_scalar"
	479	i = i + 1; fields(i)%vname="frc_t"; fields(i)%grid="grid_scalar"
	480	i = i + 1; fields(i)%vname="frc_s"; fields(i)%grid="grid_scalar"
	481	i = i + 1; fields(i)%vname="frc_wn_t"; fields(i)%grid="grid_scalar"
	482	i = i + 1; fields(i)%vname="frc_wn_s"; fields(i)%grid="grid_scalar"
	483	i = i + 1; fields(i)%vname="ssh_ini"; fields(i)%grid="grid_N"
	484	i = i + 1; fields(i)%vname="e3t_ini"; fields(i)%grid="grid_N_3D"
	485	i = i + 1; fields(i)%vname="hc_loc_ini"; fields(i)%grid="grid_N_3D"
	486	i = i + 1; fields(i)%vname="sc_loc_ini"; fields(i)%grid="grid_N_3D"
	487	i = i + 1; fields(i)%vname="ssh_hc_loc_ini"; fields(i)%grid="grid_N"
	488	i = i + 1; fields(i)%vname="ssh_sc_loc_ini"; fields(i)%grid="grid_N"
	489	i = i + 1; fields(i)%vname="tilde_e3t_b"; fields(i)%grid="grid_N"
	490	i = i + 1; fields(i)%vname="tilde_e3t_n"; fields(i)%grid="grid_N"
	491	i = i + 1; fields(i)%vname="hdiv_lf"; fields(i)%grid="grid_N"
	492	i = i + 1; fields(i)%vname="ub2_b"; fields(i)%grid="grid_N"
	493	i = i + 1; fields(i)%vname="vb2_b"; fields(i)%grid="grid_N"
	494	i = i + 1; fields(i)%vname="sshbb_e"; fields(i)%grid="grid_N"
	495	i = i + 1; fields(i)%vname="ubb_e"; fields(i)%grid="grid_N"
	496	i = i + 1; fields(i)%vname="vbb_e"; fields(i)%grid="grid_N"
	497	i = i + 1; fields(i)%vname="sshb_e"; fields(i)%grid="grid_N"
	498	i = i + 1; fields(i)%vname="ub_e"; fields(i)%grid="grid_N"
	499	i = i + 1; fields(i)%vname="vb_e"; fields(i)%grid="grid_N"
	500	i = i + 1; fields(i)%vname="fwf_isf_b"; fields(i)%grid="grid_N"
	501	i = i + 1; fields(i)%vname="isf_sc_b"; fields(i)%grid="grid_N"
	502	i = i + 1; fields(i)%vname="isf_hc_b"; fields(i)%grid="grid_N"
	503	i = i + 1; fields(i)%vname="ssh_ibb"; fields(i)%grid="grid_N"
	504	i = i + 1; fields(i)%vname="rnf_b"; fields(i)%grid="grid_N"
	505	i = i + 1; fields(i)%vname="rnf_hc_b"; fields(i)%grid="grid_N"
	506	i = i + 1; fields(i)%vname="rnf_sc_b"; fields(i)%grid="grid_N"
	507	i = i + 1; fields(i)%vname="nn_fsbc"; fields(i)%grid="grid_scalar"
	508	i = i + 1; fields(i)%vname="ssu_m"; fields(i)%grid="grid_N"
	509	i = i + 1; fields(i)%vname="ssv_m"; fields(i)%grid="grid_N"
	510	i = i + 1; fields(i)%vname="sst_m"; fields(i)%grid="grid_N"
	511	i = i + 1; fields(i)%vname="sss_m"; fields(i)%grid="grid_N"
	512	i = i + 1; fields(i)%vname="ssh_m"; fields(i)%grid="grid_N"
	513	i = i + 1; fields(i)%vname="e3t_m"; fields(i)%grid="grid_N"
	514	i = i + 1; fields(i)%vname="frq_m"; fields(i)%grid="grid_N"
	515	i = i + 1; fields(i)%vname="avmb"; fields(i)%grid="grid_vector"
	516	i = i + 1; fields(i)%vname="avtb"; fields(i)%grid="grid_vector"
	517	i = i + 1; fields(i)%vname="ub2_i_b"; fields(i)%grid="grid_N"
	518	i = i + 1; fields(i)%vname="vb2_i_b"; fields(i)%grid="grid_N"
	519	i = i + 1; fields(i)%vname="ntime"; fields(i)%grid="grid_scalar"
	520	i = i + 1; fields(i)%vname="Dsst"; fields(i)%grid="grid_scalar"
	521	i = i + 1; fields(i)%vname="tmask"; fields(i)%grid="grid_N_3D"
	522	i = i + 1; fields(i)%vname="umask"; fields(i)%grid="grid_N_3D"
	523	i = i + 1; fields(i)%vname="vmask"; fields(i)%grid="grid_N_3D"
	524	i = i + 1; fields(i)%vname="smask"; fields(i)%grid="grid_N_3D"
	525	i = i + 1; fields(i)%vname="gdepw_n"; fields(i)%grid="grid_N_3D"
	526	i = i + 1; fields(i)%vname="e3t_n"; fields(i)%grid="grid_N_3D"
	527	i = i + 1; fields(i)%vname="e3u_n"; fields(i)%grid="grid_N_3D"
	528	i = i + 1; fields(i)%vname="e3v_n"; fields(i)%grid="grid_N_3D"
	529	i = i + 1; fields(i)%vname="surf_ini"; fields(i)%grid="grid_N"
	530	i = i + 1; fields(i)%vname="e3t_b"; fields(i)%grid="grid_N_3D"
	531	i = i + 1; fields(i)%vname="hmxl_n"; fields(i)%grid="grid_N_3D"
	532	i = i + 1; fields(i)%vname="un_bf"; fields(i)%grid="grid_N"
	533	i = i + 1; fields(i)%vname="vn_bf"; fields(i)%grid="grid_N"
	534	i = i + 1; fields(i)%vname="hbl"; fields(i)%grid="grid_N"
	535	i = i + 1; fields(i)%vname="hbli"; fields(i)%grid="grid_N"
	536	i = i + 1; fields(i)%vname="wn"; fields(i)%grid="grid_N_3D"
	537
	538	IF( i-1 > max_rst_fields) THEN
[10425]	539	WRITE(ctmp1,*) 'E R R O R : iom_set_rst_vars SIZE of RST_FIELD array is too small'
	540	CALL ctl_stop( 'iom_set_rst_vars:', ctmp1 )
[9367]	541	ENDIF
	542	END SUBROUTINE iom_set_rst_vars
	543
	544
	545	SUBROUTINE iom_set_rstw_active(cdrst_file)
	546	!!---------------------------------------------------------------------
[9535]	547	!! * SUBROUTINE iom_set_rstw_active *
[9367]	548	!!
	549	!! ** Purpose : define file name in XIOS context for writing restart
	550	!! enable variables present in restart file for writing
	551	!!---------------------------------------------------------------------
	552	!sets enabled = .TRUE. for each field in restart file
	553	CHARACTER(len=*) :: cdrst_file
	554	#if defined key_iomput
	555	TYPE(xios_field) :: field_hdl
	556	TYPE(xios_file) :: file_hdl
	557	TYPE(xios_filegroup) :: filegroup_hdl
	558	INTEGER :: i
	559	CHARACTER(lc) :: clpath
	560
	561	!set name of the restart file and enable available fields
	562	IF(lwp) WRITE(numout,*) 'Setting restart filename (for XIOS write) to: ',cdrst_file
	563	CALL xios_get_handle("file_definition", filegroup_hdl )
	564	CALL xios_add_child(filegroup_hdl, file_hdl, 'wrestart')
	565	IF(nxioso.eq.1) THEN
	566	CALL xios_set_file_attr( "wrestart", type="one_file", enabled=.TRUE.,&
	567	mode="write", output_freq=xios_timestep)
	568	if(lwp) write(numout,*) 'OPEN ', trim(cdrst_file), ' in one_file mode'
	569	ELSE
	570	CALL xios_set_file_attr( "wrestart", type="multiple_file", enabled=.TRUE.,&
	571	mode="write", output_freq=xios_timestep)
	572	if(lwp) write(numout,*) 'OPEN ', trim(cdrst_file), ' in multiple_file mode'
	573	ENDIF
	574	CALL xios_set_file_attr( "wrestart", name=trim(cdrst_file))
	575	!define fields for restart context
	576	DO i = 1, max_rst_fields
	577	IF( rst_wfields(i)%active ) THEN
	578	CALL xios_add_child(file_hdl, field_hdl, TRIM(rst_wfields(i)%vname))
	579	SELECT CASE (TRIM(rst_wfields(i)%grid))
	580	CASE ("grid_N_3D")
	581	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	582	domain_ref="grid_N", axis_ref="nav_lev", prec = 8, operation = "instant")
	583	CASE ("grid_N")
	584	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	585	domain_ref="grid_N", prec = 8, operation = "instant")
	586	CASE ("grid_vector")
	587	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	588	axis_ref="nav_lev", prec = 8, operation = "instant")
	589	CASE ("grid_scalar")
	590	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	591	scalar_ref = "grid_scalar", prec = 8, operation = "instant")
	592	END SELECT
	593	ENDIF
	594	END DO
	595	#endif
	596	END SUBROUTINE iom_set_rstw_active
	597
[9984]	598	SUBROUTINE iom_set_rst_context(ld_rstr)
[9367]	599	!!---------------------------------------------------------------------
[9535]	600	!! * SUBROUTINE iom_set_rst_context *
[9367]	601	!!
	602	!! ** Purpose : Define domain, axis and grid for restart (read/write)
	603	!! context
	604	!!
	605	!!---------------------------------------------------------------------
[9984]	606	LOGICAL, INTENT(IN) :: ld_rstr
	607	!ld_rstr is true for restart context. There is no need to define grid for
	608	!restart read, because it's read from file
[9367]	609	#if defined key_iomput
	610	TYPE(xios_domaingroup) :: domaingroup_hdl
	611	TYPE(xios_domain) :: domain_hdl
	612	TYPE(xios_axisgroup) :: axisgroup_hdl
	613	TYPE(xios_axis) :: axis_hdl
	614	TYPE(xios_scalar) :: scalar_hdl
	615	TYPE(xios_scalargroup) :: scalargroup_hdl
	616
	617	CALL xios_get_handle("domain_definition",domaingroup_hdl)
	618	CALL xios_add_child(domaingroup_hdl, domain_hdl, "grid_N")
[9984]	619	CALL set_grid("N", glamt, gphit, .TRUE., ld_rstr)
[9367]	620
	621	CALL xios_get_handle("axis_definition",axisgroup_hdl)
	622	CALL xios_add_child(axisgroup_hdl, axis_hdl, "nav_lev")
	623	!AGRIF fails to compile when unit= is in call to xios_set_axis_attr
	624	! CALL xios_set_axis_attr( "nav_lev", long_name="Vertical levels", unit="m", positive="down")
	625	CALL xios_set_axis_attr( "nav_lev", long_name="Vertical levels in meters", positive="down")
	626	CALL iom_set_axis_attr( "nav_lev", paxis = gdept_1d )
	627
	628	CALL xios_get_handle("scalar_definition", scalargroup_hdl)
	629	CALL xios_add_child(scalargroup_hdl, scalar_hdl, "grid_scalar")
	630	#endif
	631	END SUBROUTINE iom_set_rst_context
	632
[4152]	633	SUBROUTINE iom_swap( cdname )
[1793]	634	!!---------------------------------------------------------------------
	635	!! * SUBROUTINE iom_swap *
	636	!!
	637	!! ** Purpose : swap context between different agrif grid for xmlio_server
	638	!!---------------------------------------------------------------------
[4152]	639	CHARACTER(len=*), INTENT(in) :: cdname
[1793]	640	#if defined key_iomput
[3695]	641	TYPE(xios_context) :: nemo_hdl
[1793]	642
[4152]	643	IF( TRIM(Agrif_CFixed()) == '0' ) THEN
	644	CALL xios_get_handle(TRIM(cdname),nemo_hdl)
	645	ELSE
	646	CALL xios_get_handle(TRIM(Agrif_CFixed())//"_"//TRIM(cdname),nemo_hdl)
	647	ENDIF
	648	!
	649	CALL xios_set_current_context(nemo_hdl)
[1793]	650	#endif
[4152]	651	!
[1793]	652	END SUBROUTINE iom_swap
	653
	654
[10425]	655	SUBROUTINE iom_open( cdname, kiomid, ldwrt, kdom, ldstop, ldiof, kdlev )
[544]	656	!!---------------------------------------------------------------------
	657	!! * SUBROUTINE iom_open *
	658	!!
	659	!! ** Purpose : open an input file (return 0 if not found)
	660	!!---------------------------------------------------------------------
	661	CHARACTER(len=*), INTENT(in ) :: cdname ! File name
	662	INTEGER , INTENT( out) :: kiomid ! iom identifier of the opened file
	663	LOGICAL , INTENT(in ), OPTIONAL :: ldwrt ! open in write modeb (default = .FALSE.)
	664	INTEGER , INTENT(in ), OPTIONAL :: kdom ! Type of domain to be written (default = jpdom_local_noovlap)
[679]	665	LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if open to read a non-existing file (default = .TRUE.)
[1319]	666	LOGICAL , INTENT(in ), OPTIONAL :: ldiof ! Interp On the Fly, needed for AGRIF (default = .FALSE.)
[9019]	667	INTEGER , INTENT(in ), OPTIONAL :: kdlev ! number of vertical levels
	668	!
[4148]	669	CHARACTER(LEN=256) :: clname ! the name of the file based on cdname [[+clcpu]+clcpu]
	670	CHARACTER(LEN=256) :: cltmpn ! tempory name to store clname (in writting mode)
[6140]	671	CHARACTER(LEN=10) :: clsuffix ! ".nc"
[550]	672	CHARACTER(LEN=15) :: clcpu ! the cpu number (max jpmax_digits digits)
[4148]	673	CHARACTER(LEN=256) :: clinfo ! info character
[544]	674	LOGICAL :: llok ! check the existence
[679]	675	LOGICAL :: llwrt ! local definition of ldwrt
[1200]	676	LOGICAL :: llnoov ! local definition to read overlap
[679]	677	LOGICAL :: llstop ! local definition of ldstop
[1319]	678	LOGICAL :: lliof ! local definition of ldiof
[544]	679	INTEGER :: icnt ! counter for digits in clcpu (max = jpmax_digits)
	680	INTEGER :: iln, ils ! lengths of character
	681	INTEGER :: idom ! type of domain
	682	INTEGER :: istop !
	683	INTEGER, DIMENSION(2,5) :: idompar ! domain parameters:
	684	! local number of points for x,y dimensions
	685	! position of first local point for x,y dimensions
	686	! position of last local point for x,y dimensions
	687	! start halo size for x,y dimensions
	688	! end halo size for x,y dimensions
	689	!---------------------------------------------------------------------
	690	! Initializations and control
	691	! =============
[1341]	692	kiomid = -1
[544]	693	clinfo = ' iom_open ~~~ '
	694	istop = nstop
	695	! if iom_open is called for the first time: initialize iom_file(:)%nfid to 0
	696	! (could be done when defining iom_file in f95 but not in f90)
[1441]	697	IF( Agrif_Root() ) THEN
	698	IF( iom_open_init == 0 ) THEN
	699	iom_file(:)%nfid = 0
	700	iom_open_init = 1
	701	ENDIF
[1409]	702	ENDIF
[544]	703	! do we read or write the file?
	704	IF( PRESENT(ldwrt) ) THEN ; llwrt = ldwrt
	705	ELSE ; llwrt = .FALSE.
	706	ENDIF
[679]	707	! do we call ctl_stop if we try to open a non-existing file in read mode?
	708	IF( PRESENT(ldstop) ) THEN ; llstop = ldstop
	709	ELSE ; llstop = .TRUE.
	710	ENDIF
[1319]	711	! are we using interpolation on the fly?
	712	IF( PRESENT(ldiof) ) THEN ; lliof = ldiof
	713	ELSE ; lliof = .FALSE.
	714	ENDIF
[1200]	715	! do we read the overlap
	716	! ugly patch SM+JMM+RB to overwrite global definition in some cases
[10016]	717	llnoov = (jpni * jpnj ) == jpnij .AND. .NOT. lk_agrif
[544]	718	! create the file name by added, if needed, TRIM(Agrif_CFixed()) and TRIM(clsuffix)
	719	! =============
	720	clname = trim(cdname)
[1319]	721	IF ( .NOT. Agrif_Root() .AND. .NOT. lliof ) THEN
[11554]	722	!FUS iln = INDEX(clname,'/')
	723	iln = INDEX(clname,'/',BACK=.true.) ! FUS: to insert the nest index at the right location within the string, the last / has to be found (search from the right to left)
[1200]	724	cltmpn = clname(1:iln)
	725	clname = clname(iln+1:LEN_TRIM(clname))
	726	clname=TRIM(cltmpn)//TRIM(Agrif_CFixed())//'_'//TRIM(clname)
	727	ENDIF
[544]	728	! which suffix should we use?
[10425]	729	clsuffix = '.nc'
[544]	730	! Add the suffix if needed
	731	iln = LEN_TRIM(clname)
	732	ils = LEN_TRIM(clsuffix)
[742]	733	IF( iln <= ils .OR. INDEX( TRIM(clname), TRIM(clsuffix), back = .TRUE. ) /= iln - ils + 1 ) &
	734	& clname = TRIM(clname)//TRIM(clsuffix)
[544]	735	cltmpn = clname ! store this name
	736	! try to find if the file to be opened already exist
	737	! =============
	738	INQUIRE( FILE = clname, EXIST = llok )
	739	IF( .NOT.llok ) THEN
	740	! we try to add the cpu number to the name
[6140]	741	WRITE(clcpu,*) narea-1
	742
[544]	743	clcpu = TRIM(ADJUSTL(clcpu))
[679]	744	iln = INDEX(clname,TRIM(clsuffix), back = .TRUE.)
[544]	745	clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix)
	746	icnt = 0
	747	INQUIRE( FILE = clname, EXIST = llok )
	748	! we try different formats for the cpu number by adding 0
	749	DO WHILE( .NOT.llok .AND. icnt < jpmax_digits )
	750	clcpu = "0"//trim(clcpu)
	751	clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix)
	752	INQUIRE( FILE = clname, EXIST = llok )
	753	icnt = icnt + 1
	754	END DO
[9367]	755	ELSE
	756	lxios_sini = .TRUE.
[544]	757	ENDIF
[679]	758	IF( llwrt ) THEN
	759	! check the domain definition
	760	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	761	! idom = jpdom_local_noovlap ! default definition
[1200]	762	IF( llnoov ) THEN ; idom = jpdom_local_noovlap ! default definition
	763	ELSE ; idom = jpdom_local_full ! default definition
[679]	764	ENDIF
	765	IF( PRESENT(kdom) ) idom = kdom
	766	! create the domain informations
	767	! =============
	768	SELECT CASE (idom)
	769	CASE (jpdom_local_full)
	770	idompar(:,1) = (/ jpi , jpj /)
	771	idompar(:,2) = (/ nimpp , njmpp /)
	772	idompar(:,3) = (/ nimpp + jpi - 1 , njmpp + jpj - 1 /)
	773	idompar(:,4) = (/ nldi - 1 , nldj - 1 /)
	774	idompar(:,5) = (/ jpi - nlei , jpj - nlej /)
	775	CASE (jpdom_local_noextra)
	776	idompar(:,1) = (/ nlci , nlcj /)
	777	idompar(:,2) = (/ nimpp , njmpp /)
	778	idompar(:,3) = (/ nimpp + nlci - 1, njmpp + nlcj - 1 /)
	779	idompar(:,4) = (/ nldi - 1 , nldj - 1 /)
	780	idompar(:,5) = (/ nlci - nlei , nlcj - nlej /)
	781	CASE (jpdom_local_noovlap)
	782	idompar(:,1) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
	783	idompar(:,2) = (/ nimpp + nldi - 1, njmpp + nldj - 1 /)
	784	idompar(:,3) = (/ nimpp + nlei - 1, njmpp + nlej - 1 /)
	785	idompar(:,4) = (/ 0 , 0 /)
	786	idompar(:,5) = (/ 0 , 0 /)
	787	CASE DEFAULT
	788	CALL ctl_stop( TRIM(clinfo), 'wrong value of kdom, only jpdom_local* cases are accepted' )
	789	END SELECT
	790	ENDIF
[6140]	791	! Open the NetCDF file
[544]	792	! =============
	793	! do we have some free file identifier?
	794	IF( MINVAL(iom_file(:)%nfid) /= 0 ) &
[679]	795	& CALL ctl_stop( TRIM(clinfo), 'No more free file identifier', 'increase jpmax_files in iom_def' )
	796	! if no file was found...
	797	IF( .NOT. llok ) THEN
	798	IF( .NOT. llwrt ) THEN ! we are in read mode
	799	IF( llstop ) THEN ; CALL ctl_stop( TRIM(clinfo), 'File '//TRIM(cltmpn)//'* not found' )
	800	ELSE ; istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file
	801	ENDIF
	802	ELSE ! we are in write mode so we
	803	clname = cltmpn ! get back the file name without the cpu number
	804	ENDIF
[2586]	805	ELSE
	806	IF( llwrt .AND. .NOT. ln_clobber ) THEN ! we stop as we want to write in a new file
	807	CALL ctl_stop( TRIM(clinfo), 'We want to write in a new file but '//TRIM(clname)//' already exists...' )
	808	istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file
[4650]	809	ELSEIF( llwrt ) THEN ! the file exists and we are in write mode with permission to
	810	clname = cltmpn ! overwrite so get back the file name without the cpu number
[2586]	811	ENDIF
[679]	812	ENDIF
[544]	813	IF( istop == nstop ) THEN ! no error within this routine
[10425]	814	CALL iom_nf90_open( clname, kiomid, llwrt, llok, idompar, kdlev = kdlev )
[544]	815	ENDIF
	816	!
	817	END SUBROUTINE iom_open
	818
	819
	820	SUBROUTINE iom_close( kiomid )
	821	!!--------------------------------------------------------------------
	822	!! * SUBROUTINE iom_close *
	823	!!
	824	!! ** Purpose : close an input file, or all files opened by iom
	825	!!--------------------------------------------------------------------
[1131]	826	INTEGER, INTENT(inout), OPTIONAL :: kiomid ! iom identifier of the file to be closed
	827	! ! return 0 when file is properly closed
	828	! ! No argument: all files opened by iom are closed
[544]	829
	830	INTEGER :: jf ! dummy loop indices
	831	INTEGER :: i_s, i_e ! temporary integer
	832	CHARACTER(LEN=100) :: clinfo ! info character
	833	!---------------------------------------------------------------------
	834	!
	835	clinfo = ' iom_close ~~~ '
	836	IF( PRESENT(kiomid) ) THEN
	837	i_s = kiomid
	838	i_e = kiomid
	839	ELSE
	840	i_s = 1
	841	i_e = jpmax_files
	842	ENDIF
	843
	844	IF( i_s > 0 ) THEN
	845	DO jf = i_s, i_e
	846	IF( iom_file(jf)%nfid > 0 ) THEN
[10425]	847	CALL iom_nf90_close( jf )
[1131]	848	iom_file(jf)%nfid = 0 ! free the id
	849	IF( PRESENT(kiomid) ) kiomid = 0 ! return 0 as id to specify that the file was closed
[679]	850	IF(lwp) WRITE(numout,*) TRIM(clinfo)//' close file: '//TRIM(iom_file(jf)%name)//' ok'
[544]	851	ELSEIF( PRESENT(kiomid) ) THEN
	852	WRITE(ctmp1,*) '--->', kiomid
	853	CALL ctl_stop( TRIM(clinfo)//' Invalid file identifier', ctmp1 )
	854	ENDIF
	855	END DO
	856	ENDIF
	857	!
	858	END SUBROUTINE iom_close
	859
	860
[11536]	861	FUNCTION iom_varid ( kiomid, cdvar, kdimsz, kndims, lduld, ldstop )
[544]	862	!!-----------------------------------------------------------------------
	863	!! * FUNCTION iom_varid *
	864	!!
	865	!! ** Purpose : get the id of a variable in a file (return 0 if not found)
	866	!!-----------------------------------------------------------------------
	867	INTEGER , INTENT(in ) :: kiomid ! file Identifier
	868	CHARACTER(len=*) , INTENT(in ) :: cdvar ! name of the variable
[9540]	869	INTEGER, DIMENSION(:), INTENT( out), OPTIONAL :: kdimsz ! size of each dimension
[11536]	870	INTEGER , INTENT( out), OPTIONAL :: kndims ! number of dimensions
	871	LOGICAL , INTENT( out), OPTIONAL :: lduld ! true if the last dimension is unlimited (time)
[745]	872	LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if looking for non-existing variable (default = .TRUE.)
[544]	873	!
	874	INTEGER :: iom_varid, iiv, i_nvd
	875	LOGICAL :: ll_fnd
	876	CHARACTER(LEN=100) :: clinfo ! info character
[745]	877	LOGICAL :: llstop ! local definition of ldstop
[544]	878	!!-----------------------------------------------------------------------
	879	iom_varid = 0 ! default definition
[745]	880	! do we call ctl_stop if we look for non-existing variable?
	881	IF( PRESENT(ldstop) ) THEN ; llstop = ldstop
	882	ELSE ; llstop = .TRUE.
	883	ENDIF
[544]	884	!
	885	IF( kiomid > 0 ) THEN
[679]	886	clinfo = 'iom_varid, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(cdvar)
[544]	887	IF( iom_file(kiomid)%nfid == 0 ) THEN
	888	CALL ctl_stop( trim(clinfo), 'the file is not open' )
	889	ELSE
	890	ll_fnd = .FALSE.
	891	iiv = 0
	892	!
	893	DO WHILE ( .NOT.ll_fnd .AND. iiv < iom_file(kiomid)%nvars )
	894	iiv = iiv + 1
	895	ll_fnd = ( TRIM(cdvar) == TRIM(iom_file(kiomid)%cn_var(iiv)) )
	896	END DO
	897	!
	898	IF( .NOT.ll_fnd ) THEN
	899	iiv = iiv + 1
	900	IF( iiv <= jpmax_vars ) THEN
[11536]	901	iom_varid = iom_nf90_varid( kiomid, cdvar, iiv, kdimsz, kndims, lduld )
[544]	902	ELSE
	903	CALL ctl_stop( trim(clinfo), 'Too many variables in the file '//iom_file(kiomid)%name, &
[10425]	904	& 'increase the parameter jpmax_vars')
[544]	905	ENDIF
[745]	906	IF( llstop .AND. iom_varid == -1 ) CALL ctl_stop( TRIM(clinfo)//' not found' )
[544]	907	ELSE
	908	iom_varid = iiv
	909	IF( PRESENT(kdimsz) ) THEN
	910	i_nvd = iom_file(kiomid)%ndims(iiv)
[9540]	911	IF( i_nvd <= size(kdimsz) ) THEN
	912	kdimsz(1:i_nvd) = iom_file(kiomid)%dimsz(1:i_nvd,iiv)
[544]	913	ELSE
	914	WRITE(ctmp1,*) i_nvd, size(kdimsz)
	915	CALL ctl_stop( trim(clinfo), 'error in kdimsz size'//trim(ctmp1) )
	916	ENDIF
	917	ENDIF
[4205]	918	IF( PRESENT(kndims) ) kndims = iom_file(kiomid)%ndims(iiv)
[11536]	919	IF( PRESENT( lduld) ) lduld = iom_file(kiomid)%luld( iiv)
[544]	920	ENDIF
	921	ENDIF
	922	ENDIF
	923	!
	924	END FUNCTION iom_varid
	925
	926
	927	!!----------------------------------------------------------------------
	928	!! INTERFACE iom_get
	929	!!----------------------------------------------------------------------
[9367]	930	SUBROUTINE iom_g0d( kiomid, cdvar, pvar, ktime, ldxios )
[544]	931	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	932	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	933	REAL(wp) , INTENT( out) :: pvar ! read field
[4245]	934	INTEGER , INTENT(in ), OPTIONAL :: ktime ! record number
[9367]	935	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! use xios to read restart
[544]	936	!
[4245]	937	INTEGER :: idvar ! variable id
	938	INTEGER :: idmspc ! number of spatial dimensions
	939	INTEGER , DIMENSION(1) :: itime ! record number
	940	CHARACTER(LEN=100) :: clinfo ! info character
	941	CHARACTER(LEN=100) :: clname ! file name
	942	CHARACTER(LEN=1) :: cldmspc !
[9367]	943	LOGICAL :: llxios
[544]	944	!
[9367]	945	llxios = .FALSE.
	946	IF( PRESENT(ldxios) ) llxios = ldxios
	947
	948	IF(.NOT.llxios) THEN ! read data using default library
	949	itime = 1
	950	IF( PRESENT(ktime) ) itime = ktime
	951	!
	952	clname = iom_file(kiomid)%name
	953	clinfo = ' iom_g0d, file: '//trim(clname)//', var: '//trim(cdvar)
	954	!
	955	IF( kiomid > 0 ) THEN
	956	idvar = iom_varid( kiomid, cdvar )
	957	IF( iom_file(kiomid)%nfid > 0 .AND. idvar > 0 ) THEN
	958	idmspc = iom_file ( kiomid )%ndims( idvar )
	959	IF( iom_file(kiomid)%luld(idvar) ) idmspc = idmspc - 1
	960	WRITE(cldmspc , fmt='(i1)') idmspc
	961	IF( idmspc > 0 ) CALL ctl_stop( TRIM(clinfo), 'When reading to a 0D array, we do not accept data', &
	962	& 'with 1 or more spatial dimensions: '//cldmspc//' were found.' , &
	963	& 'Use ncwa -a to suppress the unnecessary dimensions' )
[10425]	964	CALL iom_nf90_get( kiomid, idvar, pvar, itime )
[9367]	965	ENDIF
[679]	966	ENDIF
[9367]	967	ELSE
[9535]	968	#if defined key_iomput
[9367]	969	IF(lwp) WRITE(numout,*) 'XIOS RST READ (0D): ', trim(cdvar)
	970	CALL iom_swap( TRIM(crxios_context) )
	971	CALL xios_recv_field( trim(cdvar), pvar)
	972	CALL iom_swap( TRIM(cxios_context) )
[9535]	973	#else
[10425]	974	WRITE(ctmp1,*) 'Can not use XIOS in iom_g0d, file: '//trim(clname)//', var:'//trim(cdvar)
	975	CALL ctl_stop( 'iom_g0d', ctmp1 )
[9535]	976	#endif
[679]	977	ENDIF
[550]	978	END SUBROUTINE iom_g0d
[544]	979
[9367]	980	SUBROUTINE iom_g1d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, ldxios )
[544]	981	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	982	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	983	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	984	REAL(wp) , INTENT( out), DIMENSION(:) :: pvar ! read field
	985	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	986	INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kstart ! start axis position of the reading
	987	INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kcount ! number of points in each axis
[9367]	988	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	989	!
[679]	990	IF( kiomid > 0 ) THEN
	991	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r1d=pvar, &
[9367]	992	& ktime=ktime, kstart=kstart, kcount=kcount, &
	993	& ldxios=ldxios )
[679]	994	ENDIF
[550]	995	END SUBROUTINE iom_g1d
[544]	996
[9367]	997	SUBROUTINE iom_g2d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, lrowattr, ldxios)
[544]	998	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	999	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1000	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	1001	REAL(wp) , INTENT( out), DIMENSION(:,:) :: pvar ! read field
	1002	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	1003	INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kstart ! start axis position of the reading
	1004	INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kcount ! number of points in each axis
[5118]	1005	LOGICAL , INTENT(in ) , OPTIONAL :: lrowattr ! logical flag telling iom_get to
	1006	! look for and use a file attribute
	1007	! called open_ocean_jstart to set the start
	1008	! value for the 2nd dimension (netcdf only)
[9367]	1009	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	1010	!
[679]	1011	IF( kiomid > 0 ) THEN
	1012	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r2d=pvar, &
[5118]	1013	& ktime=ktime, kstart=kstart, kcount=kcount, &
[9367]	1014	& lrowattr=lrowattr, ldxios=ldxios)
[679]	1015	ENDIF
[550]	1016	END SUBROUTINE iom_g2d
[544]	1017
[9367]	1018	SUBROUTINE iom_g3d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, lrowattr, ldxios )
[544]	1019	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1020	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1021	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	1022	REAL(wp) , INTENT( out), DIMENSION(:,:,:) :: pvar ! read field
	1023	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	1024	INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kstart ! start axis position of the reading
	1025	INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kcount ! number of points in each axis
[5118]	1026	LOGICAL , INTENT(in ) , OPTIONAL :: lrowattr ! logical flag telling iom_get to
	1027	! look for and use a file attribute
	1028	! called open_ocean_jstart to set the start
	1029	! value for the 2nd dimension (netcdf only)
[9367]	1030	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	1031	!
[679]	1032	IF( kiomid > 0 ) THEN
	1033	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r3d=pvar, &
[5118]	1034	& ktime=ktime, kstart=kstart, kcount=kcount, &
[9367]	1035	& lrowattr=lrowattr, ldxios=ldxios )
[679]	1036	ENDIF
[550]	1037	END SUBROUTINE iom_g3d
[544]	1038	!!----------------------------------------------------------------------
	1039
	1040	SUBROUTINE iom_get_123d( kiomid, kdom , cdvar , &
[679]	1041	& pv_r1d, pv_r2d, pv_r3d, &
[5118]	1042	& ktime , kstart, kcount, &
[9367]	1043	& lrowattr, ldxios )
[544]	1044	!!-----------------------------------------------------------------------
	1045	!! * ROUTINE iom_get_123d *
	1046	!!
	1047	!! ** Purpose : read a 1D/2D/3D variable
	1048	!!
	1049	!! ** Method : read ONE record at each CALL
	1050	!!-----------------------------------------------------------------------
	1051	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1052	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1053	CHARACTER(len=*) , INTENT(in ) :: cdvar ! Name of the variable
	1054	REAL(wp), DIMENSION(:) , INTENT( out), OPTIONAL :: pv_r1d ! read field (1D case)
	1055	REAL(wp), DIMENSION(:,:) , INTENT( out), OPTIONAL :: pv_r2d ! read field (2D case)
	1056	REAL(wp), DIMENSION(:,:,:) , INTENT( out), OPTIONAL :: pv_r3d ! read field (3D case)
	1057	INTEGER , INTENT(in ), OPTIONAL :: ktime ! record number
	1058	INTEGER , DIMENSION(:) , INTENT(in ), OPTIONAL :: kstart ! start position of the reading in each axis
	1059	INTEGER , DIMENSION(:) , INTENT(in ), OPTIONAL :: kcount ! number of points to be read in each axis
[5118]	1060	LOGICAL , INTENT(in ), OPTIONAL :: lrowattr ! logical flag telling iom_get to
[9367]	1061	! look for and use a file attribute
	1062	! called open_ocean_jstart to set the start
	1063	! value for the 2nd dimension (netcdf only)
	1064	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! use XIOS to read restart
[544]	1065	!
[9367]	1066	LOGICAL :: llxios ! local definition for XIOS read
[1200]	1067	LOGICAL :: llnoov ! local definition to read overlap
[5118]	1068	LOGICAL :: luse_jattr ! local definition to read open_ocean_jstart file attribute
	1069	INTEGER :: jstartrow ! start point for 2nd dimension optionally set by file attribute
[544]	1070	INTEGER :: jl ! loop on number of dimension
	1071	INTEGER :: idom ! type of domain
	1072	INTEGER :: idvar ! id of the variable
	1073	INTEGER :: inbdim ! number of dimensions of the variable
	1074	INTEGER :: idmspc ! number of spatial dimensions
	1075	INTEGER :: itime ! record number
	1076	INTEGER :: istop ! temporary value of nstop
[679]	1077	INTEGER :: ix1, ix2, iy1, iy2 ! subdomain indexes
	1078	INTEGER :: ji, jj ! loop counters
[5118]	1079	INTEGER :: irankpv !
[679]	1080	INTEGER :: ind1, ind2 ! substring index
[544]	1081	INTEGER, DIMENSION(jpmax_dims) :: istart ! starting point to read for each axis
	1082	INTEGER, DIMENSION(jpmax_dims) :: icnt ! number of value to read along each axis
	1083	INTEGER, DIMENSION(jpmax_dims) :: idimsz ! size of the dimensions of the variable
[679]	1084	INTEGER, DIMENSION(jpmax_dims) :: ishape ! size of the dimensions of the variable
[544]	1085	REAL(wp) :: zscf, zofs ! sacle_factor and add_offset
	1086	INTEGER :: itmp ! temporary integer
[4148]	1087	CHARACTER(LEN=256) :: clinfo ! info character
	1088	CHARACTER(LEN=256) :: clname ! file name
[679]	1089	CHARACTER(LEN=1) :: clrankpv, cldmspc !
[6140]	1090	LOGICAL :: ll_depth_spec ! T => if kstart, kcount present then only use values for 3rd spatial dimension.
[9019]	1091	INTEGER :: inlev ! number of levels for 3D data
[9367]	1092	REAL(wp) :: gma, gmi
[544]	1093	!---------------------------------------------------------------------
	1094	!
[9019]	1095	inlev = -1
	1096	IF( PRESENT(pv_r3d) ) inlev = SIZE(pv_r3d, 3)
[9367]	1097	!
	1098	llxios = .FALSE.
	1099	if(PRESENT(ldxios)) llxios = ldxios
	1100	idvar = iom_varid( kiomid, cdvar )
[544]	1101	idom = kdom
[9367]	1102	!
	1103	IF(.NOT.llxios) THEN
	1104	clname = iom_file(kiomid)%name ! esier to read
	1105	clinfo = ' iom_get_123d, file: '//trim(clname)//', var: '//trim(cdvar)
	1106	! local definition of the domain ?
	1107	! do we read the overlap
	1108	! ugly patch SM+JMM+RB to overwrite global definition in some cases
	1109	llnoov = (jpni * jpnj ) == jpnij .AND. .NOT. lk_agrif
	1110	! check kcount and kstart optionals parameters...
	1111	IF( PRESENT(kcount) .AND. (.NOT. PRESENT(kstart)) ) CALL ctl_stop(trim(clinfo), 'kcount present needs kstart present')
	1112	IF( PRESENT(kstart) .AND. (.NOT. PRESENT(kcount)) ) CALL ctl_stop(trim(clinfo), 'kstart present needs kcount present')
	1113	IF( PRESENT(kstart) .AND. idom /= jpdom_unknown .AND. idom /= jpdom_autoglo_xy ) &
	1114	& CALL ctl_stop(trim(clinfo), 'kstart present needs kdom = jpdom_unknown or kdom = jpdom_autoglo_xy')
[544]	1115
[9367]	1116	luse_jattr = .false.
	1117	IF( PRESENT(lrowattr) ) THEN
	1118	IF( lrowattr .AND. idom /= jpdom_data ) CALL ctl_stop(trim(clinfo), 'lrowattr present and true needs kdom = jpdom_data')
	1119	IF( lrowattr .AND. idom == jpdom_data ) luse_jattr = .true.
[6140]	1120	ENDIF
[679]	1121
[9367]	1122	! Search for the variable in the data base (eventually actualize data)
	1123	istop = nstop
[544]	1124	!
[9367]	1125	IF( idvar > 0 ) THEN
	1126	! to write iom_file(kiomid)%dimsz in a shorter way !
	1127	idimsz(:) = iom_file(kiomid)%dimsz(:, idvar)
	1128	inbdim = iom_file(kiomid)%ndims(idvar) ! number of dimensions in the file
	1129	idmspc = inbdim ! number of spatial dimensions in the file
	1130	IF( iom_file(kiomid)%luld(idvar) ) idmspc = inbdim - 1
	1131	IF( idmspc > 3 ) CALL ctl_stop(trim(clinfo), 'the file has more than 3 spatial dimensions this case is not coded...')
	1132	!
	1133	! update idom definition...
	1134	! Identify the domain in case of jpdom_auto(glo/dta) definition
	1135	IF( idom == jpdom_autoglo_xy ) THEN
	1136	ll_depth_spec = .TRUE.
	1137	idom = jpdom_autoglo
	1138	ELSE
	1139	ll_depth_spec = .FALSE.
	1140	ENDIF
	1141	IF( idom == jpdom_autoglo .OR. idom == jpdom_autodta ) THEN
	1142	IF( idom == jpdom_autoglo ) THEN ; idom = jpdom_global
	1143	ELSE ; idom = jpdom_data
[544]	1144	ENDIF
[9367]	1145	ind1 = INDEX( clname, '_', back = .TRUE. ) + 1
	1146	ind2 = INDEX( clname, '.', back = .TRUE. ) - 1
	1147	IF( ind2 > ind1 ) THEN ; IF( VERIFY( clname(ind1:ind2), '0123456789' ) == 0 ) idom = jpdom_local ; ENDIF
	1148	ENDIF
	1149	! Identify the domain in case of jpdom_local definition
	1150	IF( idom == jpdom_local ) THEN
	1151	IF( idimsz(1) == jpi .AND. idimsz(2) == jpj ) THEN ; idom = jpdom_local_full
	1152	ELSEIF( idimsz(1) == nlci .AND. idimsz(2) == nlcj ) THEN ; idom = jpdom_local_noextra
	1153	ELSEIF( idimsz(1) == (nlei - nldi + 1) .AND. idimsz(2) == (nlej - nldj + 1) ) THEN ; idom = jpdom_local_noovlap
	1154	ELSE ; CALL ctl_stop( trim(clinfo), 'impossible to identify the local domain' )
	1155	ENDIF
	1156	ENDIF
	1157	!
	1158	! check the consistency between input array and data rank in the file
	1159	!
	1160	! initializations
	1161	itime = 1
	1162	IF( PRESENT(ktime) ) itime = ktime
	1163	!
	1164	irankpv = 1 * COUNT( (/PRESENT(pv_r1d)/) ) + 2 * COUNT( (/PRESENT(pv_r2d)/) ) + 3 * COUNT( (/PRESENT(pv_r3d)/) )
	1165	WRITE(clrankpv, fmt='(i1)') irankpv
	1166	WRITE(cldmspc , fmt='(i1)') idmspc
	1167	!
[12154]	1168	!!GS: we consider 2D data as 3D data with vertical dim size = 1
	1169	!IF( idmspc < irankpv ) THEN
	1170	! CALL ctl_stop( TRIM(clinfo), 'The file has only '//cldmspc//' spatial dimension', &
	1171	! & 'it is impossible to read a '//clrankpv//'D array from this file...' )
	1172	!ELSEIF( idmspc == irankpv ) THEN
	1173	IF( idmspc == irankpv ) THEN
[9367]	1174	IF( PRESENT(pv_r1d) .AND. idom /= jpdom_unknown ) &
	1175	& CALL ctl_stop( TRIM(clinfo), 'case not coded...You must use jpdom_unknown' )
	1176	ELSEIF( idmspc > irankpv ) THEN
	1177	IF( PRESENT(pv_r2d) .AND. itime == 1 .AND. idimsz(3) == 1 .AND. idmspc == 3 ) THEN
	1178	CALL ctl_warn( trim(clinfo), '2D array but 3 spatial dimensions for the data...' , &
	1179	& 'As the size of the z dimension is 1 and as we try to read the first record, ', &
	1180	& 'we accept this case, even if there is a possible mix-up between z and time dimension' )
	1181	idmspc = idmspc - 1
	1182	ELSE
	1183	CALL ctl_stop( TRIM(clinfo), 'To keep iom lisibility, when reading a '//clrankpv//'D array,' , &
	1184	& 'we do not accept data with '//cldmspc//' spatial dimensions', &
	1185	& 'Use ncwa -a to suppress the unnecessary dimensions' )
	1186	ENDIF
	1187	ENDIF
	1188	!
	1189	! definition of istart and icnt
	1190	!
	1191	icnt (:) = 1
	1192	istart(:) = 1
	1193	istart(idmspc+1) = itime
	1194
	1195	IF( PRESENT(kstart) .AND. .NOT. ll_depth_spec ) THEN
	1196	istart(1:idmspc) = kstart(1:idmspc)
	1197	icnt (1:idmspc) = kcount(1:idmspc)
	1198	ELSE
	1199	IF(idom == jpdom_unknown ) THEN
	1200	icnt(1:idmspc) = idimsz(1:idmspc)
	1201	ELSE
	1202	IF( .NOT. PRESENT(pv_r1d) ) THEN ! not a 1D array
	1203	IF( idom == jpdom_data ) THEN
	1204	jstartrow = 1
	1205	IF( luse_jattr ) THEN
	1206	CALL iom_getatt(kiomid, 'open_ocean_jstart', jstartrow ) ! -999 is returned if the attribute is not found
	1207	jstartrow = MAX(1,jstartrow)
	1208	ENDIF
	1209	istart(1:2) = (/ mig(1), mjg(1) + jstartrow - 1 /) ! icnt(1:2) done below
	1210	ELSEIF( idom == jpdom_global ) THEN ; istart(1:2) = (/ nimpp , njmpp /) ! icnt(1:2) done below
[5118]	1211	ENDIF
[9367]	1212	! we do not read the overlap -> we start to read at nldi, nldj
[679]	1213	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1214	! IF( idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /)
[9367]	1215	IF( llnoov .AND. idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /)
[679]	1216	! we do not read the overlap and the extra-halos -> from nldi to nlei and from nldj to nlej
	1217	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1218	! icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
[9367]	1219	IF( llnoov ) THEN ; icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
	1220	ELSE ; icnt(1:2) = (/ nlci , nlcj /)
[544]	1221	ENDIF
[9367]	1222	IF( PRESENT(pv_r3d) ) THEN
	1223	IF( idom == jpdom_data ) THEN ; icnt(3) = inlev
	1224	ELSEIF( ll_depth_spec .AND. PRESENT(kstart) ) THEN ; istart(3) = kstart(3) ; icnt(3) = kcount(3)
	1225	ELSE ; icnt(3) = inlev
	1226	ENDIF
	1227	ENDIF
[544]	1228	ENDIF
	1229	ENDIF
[679]	1230	ENDIF
[544]	1231
[9367]	1232	! check that istart and icnt can be used with this file
	1233	!-
	1234	DO jl = 1, jpmax_dims
	1235	itmp = istart(jl)+icnt(jl)-1
	1236	IF( itmp > idimsz(jl) .AND. idimsz(jl) /= 0 ) THEN
	1237	WRITE( ctmp1, FMT="('(istart(', i1, ') + icnt(', i1, ') - 1) = ', i5)" ) jl, jl, itmp
	1238	WRITE( ctmp2, FMT="(' is larger than idimsz(', i1,') = ', i5)" ) jl, idimsz(jl)
	1239	CALL ctl_stop( trim(clinfo), 'start and count too big regarding to the size of the data, ', ctmp1, ctmp2 )
	1240	ENDIF
	1241	END DO
[544]	1242
[9367]	1243	! check that icnt matches the input array
	1244	!-
	1245	IF( idom == jpdom_unknown ) THEN
	1246	IF( irankpv == 1 ) ishape(1:1) = SHAPE(pv_r1d)
	1247	IF( irankpv == 2 ) ishape(1:2) = SHAPE(pv_r2d)
	1248	IF( irankpv == 3 ) ishape(1:3) = SHAPE(pv_r3d)
	1249	ctmp1 = 'd'
	1250	ELSE
	1251	IF( irankpv == 2 ) THEN
[679]	1252	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1253	! ishape(1:2) = SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1 = 'd(nldi:nlei,nldj:nlej)'
[9367]	1254	IF( llnoov ) THEN ; ishape(1:2)=SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1='d(nldi:nlei,nldj:nlej)'
	1255	ELSE ; ishape(1:2)=SHAPE(pv_r2d(1 :nlci,1 :nlcj )) ; ctmp1='d(1:nlci,1:nlcj)'
	1256	ENDIF
[544]	1257	ENDIF
[9367]	1258	IF( irankpv == 3 ) THEN
[679]	1259	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1260	! ishape(1:3) = SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1 = 'd(nldi:nlei,nldj:nlej,:)'
[9367]	1261	IF( llnoov ) THEN ; ishape(1:3)=SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1='d(nldi:nlei,nldj:nlej,:)'
	1262	ELSE ; ishape(1:3)=SHAPE(pv_r3d(1 :nlci,1 :nlcj,:)) ; ctmp1='d(1:nlci,1:nlcj,:)'
	1263	ENDIF
[544]	1264	ENDIF
[679]	1265	ENDIF
	1266
[9367]	1267	DO jl = 1, irankpv
	1268	WRITE( ctmp2, FMT="(', ', i1,'): ', i5,' /= icnt(', i1,'):', i5)" ) jl, ishape(jl), jl, icnt(jl)
	1269	IF( ishape(jl) /= icnt(jl) ) CALL ctl_stop( TRIM(clinfo), 'size(pv_r'//clrankpv//TRIM(ctmp1)//TRIM(ctmp2) )
	1270	END DO
[679]	1271
[9367]	1272	ENDIF
[544]	1273
[9367]	1274	! read the data
	1275	!-
	1276	IF( idvar > 0 .AND. istop == nstop ) THEN ! no additional errors until this point...
	1277	!
[679]	1278	! find the right index of the array to be read
	1279	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1280	! IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej
	1281	! ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1282	! ENDIF
[9367]	1283	IF( llnoov ) THEN
	1284	IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej
	1285	ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1286	ENDIF
	1287	ELSE
	1288	IF( idom /= jpdom_unknown ) THEN ; ix1 = 1 ; ix2 = nlci ; iy1 = 1 ; iy2 = nlcj
	1289	ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1290	ENDIF
[679]	1291	ENDIF
	1292
[10425]	1293	CALL iom_nf90_get( kiomid, idvar, inbdim, istart, icnt, ix1, ix2, iy1, iy2, pv_r1d, pv_r2d, pv_r3d )
[679]	1294
[9367]	1295	IF( istop == nstop ) THEN ! no additional errors until this point...
	1296	IF(lwp) WRITE(numout,"(10x,' read ',a,' (rec: ',i6,') in ',a,' ok')") TRIM(cdvar), itime, TRIM(iom_file(kiomid)%name)
	1297
	1298	!--- overlap areas and extra hallows (mpp)
	1299	IF( PRESENT(pv_r2d) .AND. idom /= jpdom_unknown ) THEN
[11536]	1300	CALL lbc_lnk( 'iom', pv_r2d,'Z', -999., kfillmode = jpfillnothing )
[9367]	1301	ELSEIF( PRESENT(pv_r3d) .AND. idom /= jpdom_unknown ) THEN
	1302	! this if could be simplified with the new lbc_lnk that works with any size of the 3rd dimension
	1303	IF( icnt(3) == inlev ) THEN
[11536]	1304	CALL lbc_lnk( 'iom', pv_r3d,'Z', -999., kfillmode = jpfillnothing )
[9367]	1305	ELSE ! put some arbitrary value (a call to lbc_lnk will be done later...)
	1306	DO jj = nlcj+1, jpj ; pv_r3d(1:nlci, jj, :) = pv_r3d(1:nlci, nlej, :) ; END DO
	1307	DO ji = nlci+1, jpi ; pv_r3d(ji , : , :) = pv_r3d(nlei , : , :) ; END DO
	1308	ENDIF
[679]	1309	ENDIF
[9367]	1310	!
	1311	ELSE
	1312	! return if istop == nstop is false
	1313	RETURN
[679]	1314	ENDIF
[9367]	1315	ELSE
	1316	! return if statment idvar > 0 .AND. istop == nstop is false
	1317	RETURN
	1318	ENDIF
	1319	!
	1320	ELSE ! read using XIOS. Only if KEY_IOMPUT is defined
	1321	#if defined key_iomput
	1322	!would be good to be able to check which context is active and swap only if current is not restart
	1323	CALL iom_swap( TRIM(crxios_context) )
	1324	IF( PRESENT(pv_r3d) ) THEN
[9535]	1325	pv_r3d(:, :, :) = 0.
[9367]	1326	if(lwp) write(numout,*) 'XIOS RST READ (3D): ',trim(cdvar)
	1327	CALL xios_recv_field( trim(cdvar), pv_r3d)
	1328	IF(idom /= jpdom_unknown ) then
[11536]	1329	CALL lbc_lnk( 'iom', pv_r3d,'Z', -999., kfillmode = jpfillnothing)
[679]	1330	ENDIF
[9367]	1331	ELSEIF( PRESENT(pv_r2d) ) THEN
[9535]	1332	pv_r2d(:, :) = 0.
[9367]	1333	if(lwp) write(numout,*) 'XIOS RST READ (2D): ', trim(cdvar)
	1334	CALL xios_recv_field( trim(cdvar), pv_r2d)
	1335	IF(idom /= jpdom_unknown ) THEN
[11536]	1336	CALL lbc_lnk('iom', pv_r2d,'Z',-999., kfillmode = jpfillnothing)
[9367]	1337	ENDIF
	1338	ELSEIF( PRESENT(pv_r1d) ) THEN
[9535]	1339	pv_r1d(:) = 0.
[9367]	1340	if(lwp) write(numout,*) 'XIOS RST READ (1D): ', trim(cdvar)
	1341	CALL xios_recv_field( trim(cdvar), pv_r1d)
[544]	1342	ENDIF
[9367]	1343	CALL iom_swap( TRIM(cxios_context) )
	1344	#else
	1345	istop = istop + 1
	1346	clinfo = 'Can not use XIOS in iom_get_123d, file: '//trim(clname)//', var:'//trim(cdvar)
	1347	#endif
[544]	1348	ENDIF
[9367]	1349	!some final adjustments
	1350	! C1D case : always call lbc_lnk to replicate the central value over the whole 3X3 domain
[10425]	1351	IF( lk_c1d .AND. PRESENT(pv_r2d) ) CALL lbc_lnk( 'iom', pv_r2d,'Z',1. )
	1352	IF( lk_c1d .AND. PRESENT(pv_r3d) ) CALL lbc_lnk( 'iom', pv_r3d,'Z',1. )
[9367]	1353
	1354	!--- Apply scale_factor and offset
	1355	zscf = iom_file(kiomid)%scf(idvar) ! scale factor
	1356	zofs = iom_file(kiomid)%ofs(idvar) ! offset
	1357	IF( PRESENT(pv_r1d) ) THEN
	1358	IF( zscf /= 1. ) pv_r1d(:) = pv_r1d(:) * zscf
	1359	IF( zofs /= 0. ) pv_r1d(:) = pv_r1d(:) + zofs
	1360	ELSEIF( PRESENT(pv_r2d) ) THEN
	1361	IF( zscf /= 1.) pv_r2d(:,:) = pv_r2d(:,:) * zscf
	1362	IF( zofs /= 0.) pv_r2d(:,:) = pv_r2d(:,:) + zofs
	1363	ELSEIF( PRESENT(pv_r3d) ) THEN
	1364	IF( zscf /= 1.) pv_r3d(:,:,:) = pv_r3d(:,:,:) * zscf
	1365	IF( zofs /= 0.) pv_r3d(:,:,:) = pv_r3d(:,:,:) + zofs
	1366	ENDIF
[544]	1367	!
	1368	END SUBROUTINE iom_get_123d
	1369
[12109]	1370	SUBROUTINE iom_get_var( cdname, z2d)
	1371	CHARACTER(LEN=*), INTENT(in ) :: cdname
	1372	REAL(wp), DIMENSION(jpi,jpj) :: z2d
	1373	#if defined key_iomput
	1374	IF( xios_field_is_active( cdname, at_current_timestep_arg = .TRUE. ) ) THEN
	1375	z2d(:,:) = 0._wp
	1376	CALL xios_recv_field( cdname, z2d)
	1377	ENDIF
	1378	#else
	1379	IF( .FALSE. ) WRITE(numout,*) cdname, z2d ! useless test to avoid compilation warnings
	1380	#endif
	1381	END SUBROUTINE iom_get_var
[544]	1382
[12109]	1383
[10522]	1384	FUNCTION iom_getszuld ( kiomid )
	1385	!!-----------------------------------------------------------------------
	1386	!! * FUNCTION iom_getszuld *
[544]	1387	!!
[10522]	1388	!! ** Purpose : get the size of the unlimited dimension in a file
	1389	!! (return -1 if not found)
	1390	!!-----------------------------------------------------------------------
	1391	INTEGER, INTENT(in ) :: kiomid ! file Identifier
[544]	1392	!
[10522]	1393	INTEGER :: iom_getszuld
	1394	!!-----------------------------------------------------------------------
	1395	iom_getszuld = -1
[679]	1396	IF( kiomid > 0 ) THEN
[10523]	1397	IF( iom_file(kiomid)%iduld > 0 ) iom_getszuld = iom_file(kiomid)%lenuld
[544]	1398	ENDIF
[10522]	1399	END FUNCTION iom_getszuld
	1400
[544]	1401
	1402	!!----------------------------------------------------------------------
[10425]	1403	!! INTERFACE iom_chkatt
[2528]	1404	!!----------------------------------------------------------------------
[10425]	1405	SUBROUTINE iom_chkatt( kiomid, cdatt, llok, ksize, cdvar )
[2528]	1406	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1407	CHARACTER(len=*), INTENT(in ) :: cdatt ! Name of the attribute
[10425]	1408	LOGICAL , INTENT( out) :: llok ! Error code
	1409	INTEGER , INTENT( out), OPTIONAL :: ksize ! Size of the attribute array
[7646]	1410	CHARACTER(len=*), INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[2528]	1411	!
	1412	IF( kiomid > 0 ) THEN
[10425]	1413	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_chkatt( kiomid, cdatt, llok, ksize=ksize, cdvar=cdvar )
[2528]	1414	ENDIF
[10425]	1415	!
	1416	END SUBROUTINE iom_chkatt
	1417
	1418	!!----------------------------------------------------------------------
	1419	!! INTERFACE iom_getatt
	1420	!!----------------------------------------------------------------------
	1421	SUBROUTINE iom_g0d_iatt( kiomid, cdatt, katt0d, cdvar )
	1422	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1423	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1424	INTEGER , INTENT( out) :: katt0d ! read field
	1425	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1426	!
	1427	IF( kiomid > 0 ) THEN
	1428	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, katt0d = katt0d, cdvar=cdvar )
	1429	ENDIF
[7646]	1430	END SUBROUTINE iom_g0d_iatt
[2528]	1431
[10425]	1432	SUBROUTINE iom_g1d_iatt( kiomid, cdatt, katt1d, cdvar )
	1433	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1434	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1435	INTEGER, DIMENSION(:) , INTENT( out) :: katt1d ! read field
	1436	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1437	!
	1438	IF( kiomid > 0 ) THEN
[10425]	1439	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, katt1d = katt1d, cdvar=cdvar )
[7646]	1440	ENDIF
[10425]	1441	END SUBROUTINE iom_g1d_iatt
	1442
	1443	SUBROUTINE iom_g0d_ratt( kiomid, cdatt, patt0d, cdvar )
	1444	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1445	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1446	REAL(wp) , INTENT( out) :: patt0d ! read field
	1447	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1448	!
	1449	IF( kiomid > 0 ) THEN
	1450	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, patt0d = patt0d, cdvar=cdvar )
	1451	ENDIF
[7646]	1452	END SUBROUTINE iom_g0d_ratt
[2528]	1453
[10425]	1454	SUBROUTINE iom_g1d_ratt( kiomid, cdatt, patt1d, cdvar )
	1455	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1456	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1457	REAL(wp), DIMENSION(:), INTENT( out) :: patt1d ! read field
	1458	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1459	!
	1460	IF( kiomid > 0 ) THEN
[10425]	1461	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, patt1d = patt1d, cdvar=cdvar )
[7646]	1462	ENDIF
[10425]	1463	END SUBROUTINE iom_g1d_ratt
	1464
	1465	SUBROUTINE iom_g0d_catt( kiomid, cdatt, cdatt0d, cdvar )
	1466	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1467	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1468	CHARACTER(len=*) , INTENT( out) :: cdatt0d ! read field
	1469	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1470	!
	1471	IF( kiomid > 0 ) THEN
	1472	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, cdatt0d = cdatt0d, cdvar=cdvar )
	1473	ENDIF
[7646]	1474	END SUBROUTINE iom_g0d_catt
	1475
[10425]	1476
[2528]	1477	!!----------------------------------------------------------------------
[7646]	1478	!! INTERFACE iom_putatt
	1479	!!----------------------------------------------------------------------
[10425]	1480	SUBROUTINE iom_p0d_iatt( kiomid, cdatt, katt0d, cdvar )
	1481	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1482	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1483	INTEGER , INTENT(in ) :: katt0d ! written field
	1484	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1485	!
	1486	IF( kiomid > 0 ) THEN
[10425]	1487	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, katt0d = katt0d, cdvar=cdvar )
[7646]	1488	ENDIF
	1489	END SUBROUTINE iom_p0d_iatt
	1490
[10425]	1491	SUBROUTINE iom_p1d_iatt( kiomid, cdatt, katt1d, cdvar )
	1492	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1493	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1494	INTEGER, DIMENSION(:) , INTENT(in ) :: katt1d ! written field
	1495	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1496	!
	1497	IF( kiomid > 0 ) THEN
[10425]	1498	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, katt1d = katt1d, cdvar=cdvar )
[7646]	1499	ENDIF
[10425]	1500	END SUBROUTINE iom_p1d_iatt
	1501
	1502	SUBROUTINE iom_p0d_ratt( kiomid, cdatt, patt0d, cdvar )
	1503	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1504	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1505	REAL(wp) , INTENT(in ) :: patt0d ! written field
	1506	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1507	!
	1508	IF( kiomid > 0 ) THEN
	1509	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, patt0d = patt0d, cdvar=cdvar )
	1510	ENDIF
[7646]	1511	END SUBROUTINE iom_p0d_ratt
	1512
[10425]	1513	SUBROUTINE iom_p1d_ratt( kiomid, cdatt, patt1d, cdvar )
	1514	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1515	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1516	REAL(wp), DIMENSION(:), INTENT(in ) :: patt1d ! written field
	1517	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1518	!
	1519	IF( kiomid > 0 ) THEN
[10425]	1520	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, patt1d = patt1d, cdvar=cdvar )
[7646]	1521	ENDIF
[10425]	1522	END SUBROUTINE iom_p1d_ratt
	1523
	1524	SUBROUTINE iom_p0d_catt( kiomid, cdatt, cdatt0d, cdvar )
	1525	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1526	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1527	CHARACTER(len=*) , INTENT(in ) :: cdatt0d ! written field
	1528	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1529	!
	1530	IF( kiomid > 0 ) THEN
	1531	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, cdatt0d = cdatt0d, cdvar=cdvar )
	1532	ENDIF
[7646]	1533	END SUBROUTINE iom_p0d_catt
	1534
[10425]	1535
[7646]	1536	!!----------------------------------------------------------------------
[544]	1537	!! INTERFACE iom_rstput
	1538	!!----------------------------------------------------------------------
[9367]	1539	SUBROUTINE iom_rp0d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1540	INTEGER , INTENT(in) :: kt ! ocean time-step
	1541	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1542	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1543	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[556]	1544	REAL(wp) , INTENT(in) :: pvar ! written field
[544]	1545	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1546	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1547	LOGICAL :: llx ! local xios write flag
[544]	1548	INTEGER :: ivid ! variable id
[9367]	1549
	1550	llx = .FALSE.
	1551	IF(PRESENT(ldxios)) llx = ldxios
	1552	IF( llx ) THEN
	1553	#ifdef key_iomput
	1554	IF( kt == kwrite ) THEN
	1555	IF(lwp) write(numout,*) 'RESTART: write (XIOS 0D) ',trim(cdvar)
	1556	CALL xios_send_field(trim(cdvar), pvar)
	1557	ENDIF
	1558	#endif
	1559	ELSE
	1560	IF( kiomid > 0 ) THEN
	1561	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1562	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1563	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r0d = pvar )
[9367]	1564	ENDIF
[679]	1565	ENDIF
	1566	ENDIF
[550]	1567	END SUBROUTINE iom_rp0d
[544]	1568
[9367]	1569	SUBROUTINE iom_rp1d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1570	INTEGER , INTENT(in) :: kt ! ocean time-step
	1571	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1572	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1573	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1574	REAL(wp) , INTENT(in), DIMENSION( :) :: pvar ! written field
[544]	1575	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1576	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1577	LOGICAL :: llx ! local xios write flag
[544]	1578	INTEGER :: ivid ! variable id
[9367]	1579
	1580	llx = .FALSE.
	1581	IF(PRESENT(ldxios)) llx = ldxios
	1582	IF( llx ) THEN
	1583	#ifdef key_iomput
	1584	IF( kt == kwrite ) THEN
	1585	IF(lwp) write(numout,*) 'RESTART: write (XIOS 1D) ',trim(cdvar)
	1586	CALL xios_send_field(trim(cdvar), pvar)
	1587	ENDIF
	1588	#endif
	1589	ELSE
	1590	IF( kiomid > 0 ) THEN
	1591	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1592	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1593	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r1d = pvar )
[9367]	1594	ENDIF
[679]	1595	ENDIF
	1596	ENDIF
[550]	1597	END SUBROUTINE iom_rp1d
[544]	1598
[9367]	1599	SUBROUTINE iom_rp2d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1600	INTEGER , INTENT(in) :: kt ! ocean time-step
	1601	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1602	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1603	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1604	REAL(wp) , INTENT(in), DIMENSION(:, : ) :: pvar ! written field
[544]	1605	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1606	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1607	LOGICAL :: llx
[544]	1608	INTEGER :: ivid ! variable id
[9367]	1609
	1610	llx = .FALSE.
	1611	IF(PRESENT(ldxios)) llx = ldxios
	1612	IF( llx ) THEN
	1613	#ifdef key_iomput
	1614	IF( kt == kwrite ) THEN
	1615	IF(lwp) write(numout,*) 'RESTART: write (XIOS 2D) ',trim(cdvar)
	1616	CALL xios_send_field(trim(cdvar), pvar)
	1617	ENDIF
	1618	#endif
	1619	ELSE
	1620	IF( kiomid > 0 ) THEN
	1621	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1622	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1623	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r2d = pvar )
[9367]	1624	ENDIF
[679]	1625	ENDIF
	1626	ENDIF
[550]	1627	END SUBROUTINE iom_rp2d
[544]	1628
[9367]	1629	SUBROUTINE iom_rp3d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1630	INTEGER , INTENT(in) :: kt ! ocean time-step
	1631	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1632	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1633	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1634	REAL(wp) , INTENT(in), DIMENSION(:,:,:) :: pvar ! written field
[544]	1635	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1636	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1637	LOGICAL :: llx ! local xios write flag
[544]	1638	INTEGER :: ivid ! variable id
[9367]	1639
	1640	llx = .FALSE.
	1641	IF(PRESENT(ldxios)) llx = ldxios
	1642	IF( llx ) THEN
	1643	#ifdef key_iomput
	1644	IF( kt == kwrite ) THEN
	1645	IF(lwp) write(numout,*) 'RESTART: write (XIOS 3D) ',trim(cdvar)
	1646	CALL xios_send_field(trim(cdvar), pvar)
	1647	ENDIF
	1648	#endif
	1649	ELSE
	1650	IF( kiomid > 0 ) THEN
	1651	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1652	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1653	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r3d = pvar )
[9367]	1654	ENDIF
[679]	1655	ENDIF
	1656	ENDIF
[550]	1657	END SUBROUTINE iom_rp3d
[1359]	1658
	1659
[10425]	1660	SUBROUTINE iom_delay_rst( cdaction, cdcpnt, kncid )
	1661	!!---------------------------------------------------------------------
	1662	!! Routine iom_delay_rst: used read/write restart related to mpp_delay
	1663	!!
	1664	!!---------------------------------------------------------------------
	1665	CHARACTER(len=*), INTENT(in ) :: cdaction !
	1666	CHARACTER(len=*), INTENT(in ) :: cdcpnt
	1667	INTEGER , INTENT(in ) :: kncid
	1668	!
	1669	INTEGER :: ji
	1670	INTEGER :: indim
	1671	LOGICAL :: llattexist
	1672	REAL(wp), ALLOCATABLE, DIMENSION(:) :: zreal1d
	1673	!!---------------------------------------------------------------------
	1674	!
	1675	! ===================================
	1676	IF( TRIM(cdaction) == 'READ' ) THEN ! read restart related to mpp_delay !
	1677	! ===================================
	1678	DO ji = 1, nbdelay
	1679	IF ( c_delaycpnt(ji) == cdcpnt ) THEN
	1680	CALL iom_chkatt( kncid, 'DELAY_'//c_delaylist(ji), llattexist, indim )
	1681	IF( llattexist ) THEN
	1682	ALLOCATE( todelay(ji)%z1d(indim) )
	1683	CALL iom_getatt( kncid, 'DELAY_'//c_delaylist(ji), todelay(ji)%z1d(:) )
	1684	ndelayid(ji) = 0 ! set to 0 to specify that the value was read in the restart
	1685	ENDIF
	1686	ENDIF
	1687	END DO
	1688	! ====================================
	1689	ELSE ! write restart related to mpp_delay !
	1690	! ====================================
	1691	DO ji = 1, nbdelay ! save only ocean delayed global communication variables
	1692	IF ( c_delaycpnt(ji) == cdcpnt ) THEN
	1693	IF( ASSOCIATED(todelay(ji)%z1d) ) THEN
	1694	CALL mpp_delay_rcv(ji) ! make sure %z1d is received
	1695	CALL iom_putatt( kncid, 'DELAY_'//c_delaylist(ji), todelay(ji)%z1d(:) )
	1696	ENDIF
	1697	ENDIF
	1698	END DO
	1699	!
	1700	ENDIF
	1701
	1702	END SUBROUTINE iom_delay_rst
	1703
	1704
	1705
[544]	1706	!!----------------------------------------------------------------------
[1457]	1707	!! INTERFACE iom_put
[1359]	1708	!!----------------------------------------------------------------------
[1738]	1709	SUBROUTINE iom_p0d( cdname, pfield0d )
	1710	CHARACTER(LEN=*), INTENT(in) :: cdname
	1711	REAL(wp) , INTENT(in) :: pfield0d
[11536]	1712	!! REAL(wp) , DIMENSION(jpi,jpj) :: zz ! masson
[1738]	1713	#if defined key_iomput
[11536]	1714	!!clem zz(:,:)=pfield0d
	1715	!!clem CALL xios_send_field(cdname, zz)
	1716	CALL xios_send_field(cdname, (/pfield0d/))
[1738]	1717	#else
	1718	IF( .FALSE. ) WRITE(numout,*) cdname, pfield0d ! useless test to avoid compilation warnings
	1719	#endif
	1720	END SUBROUTINE iom_p0d
	1721
[3294]	1722	SUBROUTINE iom_p1d( cdname, pfield1d )
	1723	CHARACTER(LEN=*) , INTENT(in) :: cdname
	1724	REAL(wp), DIMENSION(:), INTENT(in) :: pfield1d
	1725	#if defined key_iomput
[3695]	1726	CALL xios_send_field( cdname, RESHAPE( (/pfield1d/), (/1,1,SIZE(pfield1d)/) ) )
[3294]	1727	#else
	1728	IF( .FALSE. ) WRITE(numout,*) cdname, pfield1d ! useless test to avoid compilation warnings
	1729	#endif
	1730	END SUBROUTINE iom_p1d
	1731
[1359]	1732	SUBROUTINE iom_p2d( cdname, pfield2d )
	1733	CHARACTER(LEN=*) , INTENT(in) :: cdname
[2715]	1734	REAL(wp), DIMENSION(:,:), INTENT(in) :: pfield2d
[1412]	1735	#if defined key_iomput
[3695]	1736	CALL xios_send_field(cdname, pfield2d)
[1520]	1737	#else
	1738	IF( .FALSE. ) WRITE(numout,*) cdname, pfield2d ! useless test to avoid compilation warnings
[1359]	1739	#endif
	1740	END SUBROUTINE iom_p2d
[544]	1741
[1359]	1742	SUBROUTINE iom_p3d( cdname, pfield3d )
	1743	CHARACTER(LEN=*) , INTENT(in) :: cdname
[2715]	1744	REAL(wp), DIMENSION(:,:,:), INTENT(in) :: pfield3d
[1412]	1745	#if defined key_iomput
[9019]	1746	CALL xios_send_field( cdname, pfield3d )
[1520]	1747	#else
	1748	IF( .FALSE. ) WRITE(numout,*) cdname, pfield3d ! useless test to avoid compilation warnings
[1359]	1749	#endif
	1750	END SUBROUTINE iom_p3d
[544]	1751
[12109]	1752	SUBROUTINE iom_p4d( cdname, pfield4d )
	1753	CHARACTER(LEN=*) , INTENT(in) :: cdname
	1754	REAL(wp), DIMENSION(:,:,:,:), INTENT(in) :: pfield4d
[1412]	1755	#if defined key_iomput
[12109]	1756	CALL xios_send_field(cdname, pfield4d)
	1757	#else
	1758	IF( .FALSE. ) WRITE(numout,*) cdname, pfield4d ! useless test to avoid compilation warnings
	1759	#endif
	1760	END SUBROUTINE iom_p4d
	1761
	1762
	1763	#if defined key_iomput
[9019]	1764	!!----------------------------------------------------------------------
[9802]	1765	!! 'key_iomput' XIOS interface
[9019]	1766	!!----------------------------------------------------------------------
[1359]	1767
[9930]	1768	SUBROUTINE iom_set_domain_attr( cdid, ni_glo, nj_glo, ibegin, jbegin, ni, nj, &
[5363]	1769	& data_dim, data_ibegin, data_ni, data_jbegin, data_nj, lonvalue, latvalue, mask, &
[5415]	1770	& nvertex, bounds_lon, bounds_lat, area )
[9019]	1771	!!----------------------------------------------------------------------
	1772	!!----------------------------------------------------------------------
	1773	CHARACTER(LEN=*) , INTENT(in) :: cdid
	1774	INTEGER , OPTIONAL, INTENT(in) :: ni_glo, nj_glo, ibegin, jbegin, ni, nj
	1775	INTEGER , OPTIONAL, INTENT(in) :: data_dim, data_ibegin, data_ni, data_jbegin, data_nj
[9930]	1776	INTEGER , OPTIONAL, INTENT(in) :: nvertex
[9019]	1777	REAL(wp), DIMENSION(:) , OPTIONAL, INTENT(in) :: lonvalue, latvalue
	1778	REAL(wp), DIMENSION(:,:), OPTIONAL, INTENT(in) :: bounds_lon, bounds_lat, area
	1779	LOGICAL , DIMENSION(:) , OPTIONAL, INTENT(in) :: mask
	1780	!!----------------------------------------------------------------------
	1781	!
	1782	IF( xios_is_valid_domain (cdid) ) THEN
[4148]	1783	CALL xios_set_domain_attr ( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
	1784	& data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
[7646]	1785	& lonvalue_1D=lonvalue, latvalue_1D=latvalue, mask_1D=mask, nvertex=nvertex, bounds_lon_1D=bounds_lon, &
	1786	& bounds_lat_1D=bounds_lat, area=area, type='curvilinear')
[9367]	1787	ENDIF
[9019]	1788	IF( xios_is_valid_domaingroup(cdid) ) THEN
[4148]	1789	CALL xios_set_domaingroup_attr( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
	1790	& data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
[7646]	1791	& lonvalue_1D=lonvalue, latvalue_1D=latvalue, mask_1D=mask, nvertex=nvertex, bounds_lon_1D=bounds_lon, &
	1792	& bounds_lat_1D=bounds_lat, area=area, type='curvilinear' )
[3695]	1793	ENDIF
[9019]	1794	!
[4148]	1795	CALL xios_solve_inheritance()
[9019]	1796	!
[3695]	1797	END SUBROUTINE iom_set_domain_attr
	1798
	1799
[9019]	1800	SUBROUTINE iom_set_zoom_domain_attr( cdid, ibegin, jbegin, ni, nj )
	1801	!!----------------------------------------------------------------------
	1802	!!----------------------------------------------------------------------
[9930]	1803	CHARACTER(LEN=*), INTENT(in) :: cdid
	1804	INTEGER , INTENT(in) :: ibegin, jbegin, ni, nj
	1805	!
	1806	TYPE(xios_gridgroup) :: gridgroup_hdl
	1807	TYPE(xios_grid) :: grid_hdl
	1808	TYPE(xios_domain) :: domain_hdl
	1809	TYPE(xios_axis) :: axis_hdl
	1810	CHARACTER(LEN=64) :: cldomrefid ! domain_ref name
	1811	CHARACTER(len=1) :: cl1 ! last character of this name
[9019]	1812	!!----------------------------------------------------------------------
[9930]	1813	!
	1814	IF( xios_is_valid_zoom_domain(cdid) ) THEN
	1815	! define the zoom_domain attributs
	1816	CALL xios_set_zoom_domain_attr( cdid, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj )
	1817	! define a new 2D grid with this new domain
	1818	CALL xios_get_handle("grid_definition", gridgroup_hdl )
	1819	CALL xios_add_child(gridgroup_hdl, grid_hdl, TRIM(cdid)//'_2D' ) ! add a new 2D grid to grid_definition
	1820	CALL xios_add_child(grid_hdl, domain_hdl, TRIM(cdid) ) ! add its domain
	1821	! define a new 3D grid with this new domain
	1822	CALL xios_add_child(gridgroup_hdl, grid_hdl, TRIM(cdid)//'_3D' ) ! add a new 3D grid to grid_definition
	1823	CALL xios_add_child(grid_hdl, domain_hdl, TRIM(cdid) ) ! add its domain
	1824	! vertical axis
	1825	cl1 = cdid(LEN_TRIM(cdid):) ! last letter of cdid
	1826	cl1 = CHAR(ICHAR(cl1)+32) ! from upper to lower case
	1827	CALL xios_add_child(grid_hdl, axis_hdl, 'depth'//cl1) ! add its axis
	1828	ENDIF
	1829	!
[7646]	1830	END SUBROUTINE iom_set_zoom_domain_attr
	1831
	1832
[5415]	1833	SUBROUTINE iom_set_axis_attr( cdid, paxis, bounds )
[9019]	1834	!!----------------------------------------------------------------------
	1835	!!----------------------------------------------------------------------
[4148]	1836	CHARACTER(LEN=*) , INTENT(in) :: cdid
[5415]	1837	REAL(wp), DIMENSION(:) , OPTIONAL, INTENT(in) :: paxis
	1838	REAL(wp), DIMENSION(:,:), OPTIONAL, INTENT(in) :: bounds
[9019]	1839	!!----------------------------------------------------------------------
	1840	IF( PRESENT(paxis) ) THEN
	1841	IF( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, n_glo=SIZE(paxis), value=paxis )
	1842	IF( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, n_glo=SIZE(paxis), value=paxis )
[5415]	1843	ENDIF
[9019]	1844	IF( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, bounds=bounds )
	1845	IF( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, bounds=bounds )
[4148]	1846	CALL xios_solve_inheritance()
[3737]	1847	END SUBROUTINE iom_set_axis_attr
	1848
	1849
[4148]	1850	SUBROUTINE iom_set_field_attr( cdid, freq_op, freq_offset )
[9019]	1851	!!----------------------------------------------------------------------
	1852	!!----------------------------------------------------------------------
	1853	CHARACTER(LEN=*) , INTENT(in) :: cdid
	1854	TYPE(xios_duration), OPTIONAL, INTENT(in) :: freq_op
	1855	TYPE(xios_duration), OPTIONAL, INTENT(in) :: freq_offset
	1856	!!----------------------------------------------------------------------
	1857	IF( xios_is_valid_field (cdid) ) CALL xios_set_field_attr ( cdid, freq_op=freq_op, freq_offset=freq_offset )
	1858	IF( xios_is_valid_fieldgroup(cdid) ) CALL xios_set_fieldgroup_attr( cdid, freq_op=freq_op, freq_offset=freq_offset )
[4148]	1859	CALL xios_solve_inheritance()
[3695]	1860	END SUBROUTINE iom_set_field_attr
	1861
	1862
[4148]	1863	SUBROUTINE iom_set_file_attr( cdid, name, name_suffix )
[9019]	1864	!!----------------------------------------------------------------------
	1865	!!----------------------------------------------------------------------
[4148]	1866	CHARACTER(LEN=*) , INTENT(in) :: cdid
[3695]	1867	CHARACTER(LEN=*),OPTIONAL , INTENT(in) :: name, name_suffix
[9019]	1868	!!----------------------------------------------------------------------
	1869	IF( xios_is_valid_file (cdid) ) CALL xios_set_file_attr ( cdid, name=name, name_suffix=name_suffix )
	1870	IF( xios_is_valid_filegroup(cdid) ) CALL xios_set_filegroup_attr( cdid, name=name, name_suffix=name_suffix )
[4148]	1871	CALL xios_solve_inheritance()
[3771]	1872	END SUBROUTINE iom_set_file_attr
[3695]	1873
	1874
[4148]	1875	SUBROUTINE iom_get_file_attr( cdid, name, name_suffix, output_freq )
[9019]	1876	!!----------------------------------------------------------------------
	1877	!!----------------------------------------------------------------------
[4148]	1878	CHARACTER(LEN=*) , INTENT(in ) :: cdid
[7646]	1879	CHARACTER(LEN=*),OPTIONAL , INTENT(out) :: name, name_suffix
	1880	TYPE(xios_duration), OPTIONAL , INTENT(out) :: output_freq
[4148]	1881	LOGICAL :: llexist1,llexist2,llexist3
	1882	!---------------------------------------------------------------------
	1883	IF( PRESENT( name ) ) name = '' ! default values
	1884	IF( PRESENT( name_suffix ) ) name_suffix = ''
[7646]	1885	IF( PRESENT( output_freq ) ) output_freq = xios_duration(0,0,0,0,0,0)
[9019]	1886	IF( xios_is_valid_file (cdid) ) THEN
[4148]	1887	CALL xios_solve_inheritance()
	1888	CALL xios_is_defined_file_attr ( cdid, name = llexist1, name_suffix = llexist2, output_freq = llexist3)
	1889	IF(llexist1) CALL xios_get_file_attr ( cdid, name = name )
	1890	IF(llexist2) CALL xios_get_file_attr ( cdid, name_suffix = name_suffix )
	1891	IF(llexist3) CALL xios_get_file_attr ( cdid, output_freq = output_freq )
	1892	ENDIF
[9019]	1893	IF( xios_is_valid_filegroup(cdid) ) THEN
[4148]	1894	CALL xios_solve_inheritance()
	1895	CALL xios_is_defined_filegroup_attr( cdid, name = llexist1, name_suffix = llexist2, output_freq = llexist3)
	1896	IF(llexist1) CALL xios_get_filegroup_attr( cdid, name = name )
	1897	IF(llexist2) CALL xios_get_filegroup_attr( cdid, name_suffix = name_suffix )
	1898	IF(llexist3) CALL xios_get_filegroup_attr( cdid, output_freq = output_freq )
	1899	ENDIF
	1900	END SUBROUTINE iom_get_file_attr
	1901
	1902
	1903	SUBROUTINE iom_set_grid_attr( cdid, mask )
[9019]	1904	!!----------------------------------------------------------------------
	1905	!!----------------------------------------------------------------------
[4148]	1906	CHARACTER(LEN=*) , INTENT(in) :: cdid
[3771]	1907	LOGICAL, DIMENSION(:,:,:), OPTIONAL, INTENT(in) :: mask
[9019]	1908	!!----------------------------------------------------------------------
	1909	IF( xios_is_valid_grid (cdid) ) CALL xios_set_grid_attr ( cdid, mask_3D=mask )
	1910	IF( xios_is_valid_gridgroup(cdid) ) CALL xios_set_gridgroup_attr( cdid, mask_3D=mask )
[4148]	1911	CALL xios_solve_inheritance()
[3771]	1912	END SUBROUTINE iom_set_grid_attr
[3695]	1913
[4152]	1914	SUBROUTINE iom_setkt( kt, cdname )
[9019]	1915	!!----------------------------------------------------------------------
	1916	!!----------------------------------------------------------------------
[4152]	1917	INTEGER , INTENT(in) :: kt
	1918	CHARACTER(LEN=*), INTENT(in) :: cdname
[9019]	1919	!!----------------------------------------------------------------------
[4152]	1920	CALL iom_swap( cdname ) ! swap to cdname context
	1921	CALL xios_update_calendar(kt)
[9019]	1922	IF( cdname /= TRIM(cxios_context) ) CALL iom_swap( TRIM(cxios_context) ) ! return back to nemo context
[4152]	1923	END SUBROUTINE iom_setkt
[3695]	1924
[4152]	1925	SUBROUTINE iom_context_finalize( cdname )
[9019]	1926	!!----------------------------------------------------------------------
	1927	!!----------------------------------------------------------------------
[4152]	1928	CHARACTER(LEN=*), INTENT(in) :: cdname
[9367]	1929	CHARACTER(LEN=120) :: clname
[9019]	1930	!!----------------------------------------------------------------------
[9367]	1931	clname = cdname
	1932	IF( TRIM(Agrif_CFixed()) .NE. '0' ) clname = TRIM(Agrif_CFixed())//"_"//clname
	1933	IF( xios_is_valid_context(clname) ) THEN
[4990]	1934	CALL iom_swap( cdname ) ! swap to cdname context
	1935	CALL xios_context_finalize() ! finalize the context
[5407]	1936	IF( cdname /= TRIM(cxios_context) ) CALL iom_swap( TRIM(cxios_context) ) ! return back to nemo context
[4990]	1937	ENDIF
[9367]	1938	!
[4152]	1939	END SUBROUTINE iom_context_finalize
	1940
	1941
[9984]	1942	SUBROUTINE set_grid( cdgrd, plon, plat, ldxios, ldrxios )
[1359]	1943	!!----------------------------------------------------------------------
[4148]	1944	!! * ROUTINE set_grid *
[1359]	1945	!!
[1725]	1946	!! ** Purpose : define horizontal grids
[1359]	1947	!!----------------------------------------------------------------------
[3771]	1948	CHARACTER(LEN=1) , INTENT(in) :: cdgrd
[1359]	1949	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plon
	1950	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plat
[3771]	1951	!
[9019]	1952	INTEGER :: ni, nj
[3771]	1953	REAL(wp), DIMENSION(jpi,jpj,jpk) :: zmask
[9984]	1954	LOGICAL, INTENT(IN) :: ldxios, ldrxios
[9019]	1955	!!----------------------------------------------------------------------
	1956	!
	1957	ni = nlei-nldi+1
	1958	nj = nlej-nldj+1
	1959	!
[7646]	1960	CALL iom_set_domain_attr("grid_"//cdgrd, ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-2, jbegin=njmpp+nldj-2, ni=ni, nj=nj)
[3771]	1961	CALL iom_set_domain_attr("grid_"//cdgrd, data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
[9984]	1962	!don't define lon and lat for restart reading context.
	1963	IF ( .NOT.ldrxios ) &
	1964	CALL iom_set_domain_attr("grid_"//cdgrd, lonvalue = RESHAPE(plon(nldi:nlei, nldj:nlej),(/ ni*nj /)), &
[3771]	1965	& latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
[9019]	1966	!
[9367]	1967	IF ( ln_mskland .AND. (.NOT.ldxios) ) THEN
[3771]	1968	! mask land points, keep values on coast line -> specific mask for U, V and W points
	1969	SELECT CASE ( cdgrd )
	1970	CASE('T') ; zmask(:,:,:) = tmask(:,:,:)
[10425]	1971	CASE('U') ; zmask(2:jpim1,:,:) = tmask(2:jpim1,:,:) + tmask(3:jpi,:,:) ; CALL lbc_lnk( 'iom', zmask, 'U', 1. )
	1972	CASE('V') ; zmask(:,2:jpjm1,:) = tmask(:,2:jpjm1,:) + tmask(:,3:jpj,:) ; CALL lbc_lnk( 'iom', zmask, 'V', 1. )
[3771]	1973	CASE('W') ; zmask(:,:,2:jpk ) = tmask(:,:,1:jpkm1) + tmask(:,:,2:jpk) ; zmask(:,:,1) = tmask(:,:,1)
	1974	END SELECT
	1975	!
[7646]	1976	CALL iom_set_domain_attr( "grid_"//cdgrd , mask = RESHAPE(zmask(nldi:nlei,nldj:nlej,1),(/ni*nj /)) /= 0. )
[4148]	1977	CALL iom_set_grid_attr ( "grid_"//cdgrd//"_3D", mask = RESHAPE(zmask(nldi:nlei,nldj:nlej,:),(/ni,nj,jpk/)) /= 0. )
[3771]	1978	ENDIF
[9019]	1979	!
[1359]	1980	END SUBROUTINE set_grid
	1981
[1725]	1982
[5415]	1983	SUBROUTINE set_grid_bounds( cdgrd, plon_cnr, plat_cnr, plon_pnt, plat_pnt )
[5363]	1984	!!----------------------------------------------------------------------
	1985	!! * ROUTINE set_grid_bounds *
	1986	!!
	1987	!! ** Purpose : define horizontal grid corners
	1988	!!
	1989	!!----------------------------------------------------------------------
[9019]	1990	CHARACTER(LEN=1) , INTENT(in) :: cdgrd
	1991	REAL(wp), DIMENSION(jpi,jpj) , INTENT(in) :: plon_cnr, plat_cnr ! Lat/lon coord. of a contiguous vertex of cell (i,j)
	1992	REAL(wp), DIMENSION(jpi,jpj), OPTIONAL, INTENT(in) :: plon_pnt, plat_pnt ! Lat/lon coord. of the point of cell (i,j)
[5363]	1993	!
[9019]	1994	INTEGER :: ji, jj, jn, ni, nj
[12154]	1995	INTEGER :: icnr, jcnr ! Offset such that the vertex coordinate (i+icnr,j+jcnr)
	1996	! ! represents the bottom-left corner of cell (i,j)
[9019]	1997	REAL(wp), ALLOCATABLE, DIMENSION(:,:,:,:) :: z_bnds ! Lat/lon coordinates of the vertices of cell (i,j)
	1998	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_fld ! Working array to determine where to rotate cells
	1999	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_rot ! Lat/lon working array for rotation of cells
	2000	!!----------------------------------------------------------------------
[5415]	2001	!
[9019]	2002	ALLOCATE( z_bnds(4,jpi,jpj,2), z_fld(jpi,jpj), z_rot(4,2) )
[5363]	2003	!
[5415]	2004	! Offset of coordinate representing bottom-left corner
[5363]	2005	SELECT CASE ( TRIM(cdgrd) )
[9019]	2006	CASE ('T', 'W') ; icnr = -1 ; jcnr = -1
	2007	CASE ('U') ; icnr = 0 ; jcnr = -1
	2008	CASE ('V') ; icnr = -1 ; jcnr = 0
[5363]	2009	END SELECT
[9019]	2010	!
	2011	ni = nlei-nldi+1 ! Dimensions of subdomain interior
	2012	nj = nlej-nldj+1
	2013	!
[5363]	2014	z_fld(:,:) = 1._wp
[10425]	2015	CALL lbc_lnk( 'iom', z_fld, cdgrd, -1. ) ! Working array for location of northfold
[9019]	2016	!
[5363]	2017	! Cell vertices that can be defined
	2018	DO jj = 2, jpjm1
	2019	DO ji = 2, jpim1
[5415]	2020	z_bnds(1,ji,jj,1) = plat_cnr(ji+icnr, jj+jcnr ) ! Bottom-left
	2021	z_bnds(2,ji,jj,1) = plat_cnr(ji+icnr+1,jj+jcnr ) ! Bottom-right
	2022	z_bnds(3,ji,jj,1) = plat_cnr(ji+icnr+1,jj+jcnr+1) ! Top-right
	2023	z_bnds(4,ji,jj,1) = plat_cnr(ji+icnr, jj+jcnr+1) ! Top-left
	2024	z_bnds(1,ji,jj,2) = plon_cnr(ji+icnr, jj+jcnr ) ! Bottom-left
	2025	z_bnds(2,ji,jj,2) = plon_cnr(ji+icnr+1,jj+jcnr ) ! Bottom-right
	2026	z_bnds(3,ji,jj,2) = plon_cnr(ji+icnr+1,jj+jcnr+1) ! Top-right
	2027	z_bnds(4,ji,jj,2) = plon_cnr(ji+icnr, jj+jcnr+1) ! Top-left
[5363]	2028	END DO
	2029	END DO
[9019]	2030	!
[5363]	2031	! Cell vertices on boundries
	2032	DO jn = 1, 4
[11536]	2033	CALL lbc_lnk( 'iom', z_bnds(jn,:,:,1), cdgrd, 1., pfillval=999._wp )
	2034	CALL lbc_lnk( 'iom', z_bnds(jn,:,:,2), cdgrd, 1., pfillval=999._wp )
[5363]	2035	END DO
[9019]	2036	!
[5415]	2037	! Zero-size cells at closed boundaries if cell points provided,
	2038	! otherwise they are closed cells with unrealistic bounds
	2039	IF( PRESENT(plon_pnt) .AND. PRESENT(plat_pnt) ) THEN
	2040	IF( (nbondi == -1 .OR. nbondi == 2) .AND. .NOT. (jperio == 1 .OR. jperio == 4 .OR. jperio == 6) ) THEN
	2041	DO jn = 1, 4 ! (West or jpni = 1), closed E-W
	2042	z_bnds(jn,1,:,1) = plat_pnt(1,:) ; z_bnds(jn,1,:,2) = plon_pnt(1,:)
	2043	END DO
	2044	ENDIF
	2045	IF( (nbondi == 1 .OR. nbondi == 2) .AND. .NOT. (jperio == 1 .OR. jperio == 4 .OR. jperio == 6) ) THEN
	2046	DO jn = 1, 4 ! (East or jpni = 1), closed E-W
	2047	z_bnds(jn,nlci,:,1) = plat_pnt(nlci,:) ; z_bnds(jn,nlci,:,2) = plon_pnt(nlci,:)
	2048	END DO
	2049	ENDIF
	2050	IF( nbondj == -1 .OR. (nbondj == 2 .AND. jperio /= 2) ) THEN
	2051	DO jn = 1, 4 ! South or (jpnj = 1, not symmetric)
	2052	z_bnds(jn,:,1,1) = plat_pnt(:,1) ; z_bnds(jn,:,1,2) = plon_pnt(:,1)
	2053	END DO
	2054	ENDIF
	2055	IF( (nbondj == 1 .OR. nbondj == 2) .AND. jperio < 3 ) THEN
	2056	DO jn = 1, 4 ! (North or jpnj = 1), no north fold
	2057	z_bnds(jn,:,nlcj,1) = plat_pnt(:,nlcj) ; z_bnds(jn,:,nlcj,2) = plon_pnt(:,nlcj)
	2058	END DO
	2059	ENDIF
[5363]	2060	ENDIF
[9019]	2061	!
	2062	IF( (nbondj == 1 .OR. nbondj == 2) .AND. jperio >= 3 ) THEN ! Rotate cells at the north fold
[5363]	2063	DO jj = 1, jpj
	2064	DO ji = 1, jpi
	2065	IF( z_fld(ji,jj) == -1. ) THEN
	2066	z_rot(1,:) = z_bnds(3,ji,jj,:) ; z_rot(2,:) = z_bnds(4,ji,jj,:)
	2067	z_rot(3,:) = z_bnds(1,ji,jj,:) ; z_rot(4,:) = z_bnds(2,ji,jj,:)
	2068	z_bnds(:,ji,jj,:) = z_rot(:,:)
	2069	ENDIF
	2070	END DO
	2071	END DO
[9019]	2072	ELSE IF( nbondj == 2 .AND. jperio == 2 ) THEN ! Invert cells at the symmetric equator
[5363]	2073	DO ji = 1, jpi
	2074	z_rot(1:2,:) = z_bnds(3:4,ji,1,:)
	2075	z_rot(3:4,:) = z_bnds(1:2,ji,1,:)
	2076	z_bnds(:,ji,1,:) = z_rot(:,:)
	2077	END DO
	2078	ENDIF
[9019]	2079	!
[5363]	2080	CALL iom_set_domain_attr("grid_"//cdgrd, bounds_lat = RESHAPE(z_bnds(:,nldi:nlei,nldj:nlej,1),(/ 4,ni*nj /)), &
[9019]	2081	& bounds_lon = RESHAPE(z_bnds(:,nldi:nlei,nldj:nlej,2),(/ 4,ni*nj /)), nvertex=4 )
	2082	!
[5415]	2083	DEALLOCATE( z_bnds, z_fld, z_rot )
[9019]	2084	!
[5363]	2085	END SUBROUTINE set_grid_bounds
	2086
	2087
[5385]	2088	SUBROUTINE set_grid_znl( plat )
	2089	!!----------------------------------------------------------------------
	2090	!! * ROUTINE set_grid_znl *
	2091	!!
	2092	!! ** Purpose : define grids for zonal mean
	2093	!!
	2094	!!----------------------------------------------------------------------
	2095	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plat
	2096	!
[9019]	2097	INTEGER :: ni, nj, ix, iy
[5385]	2098	REAL(wp), DIMENSION(:), ALLOCATABLE :: zlon
[9019]	2099	!!----------------------------------------------------------------------
	2100	!
	2101	ni=nlei-nldi+1 ! define zonal mean domain (jpj*jpk)
	2102	nj=nlej-nldj+1
	2103	ALLOCATE( zlon(ni*nj) ) ; zlon(:) = 0._wp
	2104	!
[12109]	2105	! CALL dom_ngb( -168.53, 65.03, ix, iy, 'T' ) ! i-line that passes through Bering Strait: Reference latitude (used in plots)
	2106	CALL dom_ngb( 180., 90., ix, iy, 'T' ) ! i-line that passes near the North Pole : Reference latitude (used in plots)
[7646]	2107	CALL iom_set_domain_attr("gznl", ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-2, jbegin=njmpp+nldj-2, ni=ni, nj=nj)
[5385]	2108	CALL iom_set_domain_attr("gznl", data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
	2109	CALL iom_set_domain_attr("gznl", lonvalue = zlon, &
	2110	& latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
[12109]	2111	CALL iom_set_zoom_domain_attr("ptr", ibegin=ix-1, jbegin=0, ni=1, nj=jpjglo)
[5385]	2112	!
	2113	CALL iom_update_file_name('ptr')
	2114	!
	2115	END SUBROUTINE set_grid_znl
	2116
[9019]	2117
[1738]	2118	SUBROUTINE set_scalar
	2119	!!----------------------------------------------------------------------
[4148]	2120	!! * ROUTINE set_scalar *
[1738]	2121	!!
	2122	!! ** Purpose : define fake grids for scalar point
	2123	!!
	2124	!!----------------------------------------------------------------------
[5426]	2125	REAL(wp), DIMENSION(1) :: zz = 1.
[1738]	2126	!!----------------------------------------------------------------------
[9019]	2127	!
[7646]	2128	CALL iom_set_domain_attr('scalarpoint', ni_glo=jpnij, nj_glo=1, ibegin=narea-1, jbegin=0, ni=1, nj=1)
[5426]	2129	CALL iom_set_domain_attr('scalarpoint', data_dim=2, data_ibegin = 1, data_ni = 1, data_jbegin = 1, data_nj = 1)
[9019]	2130	!
	2131	zz = REAL( narea, wp )
[5426]	2132	CALL iom_set_domain_attr('scalarpoint', lonvalue=zz, latvalue=zz)
[9019]	2133	!
[1738]	2134	END SUBROUTINE set_scalar
	2135
	2136
[1725]	2137	SUBROUTINE set_xmlatt
	2138	!!----------------------------------------------------------------------
[4148]	2139	!! * ROUTINE set_xmlatt *
[1725]	2140	!!
	2141	!! ** Purpose : automatic definitions of some of the xml attributs...
	2142	!!
	2143	!!----------------------------------------------------------------------
	2144	CHARACTER(len=1),DIMENSION( 3) :: clgrd ! suffix name
[4148]	2145	CHARACTER(len=256) :: clsuff ! suffix name
[1725]	2146	CHARACTER(len=1) :: cl1 ! 1 character
[5003]	2147	CHARACTER(len=2) :: cl2 ! 2 characters
	2148	CHARACTER(len=3) :: cl3 ! 3 characters
[4148]	2149	INTEGER :: ji, jg ! loop counters
[1725]	2150	INTEGER :: ix, iy ! i-,j- index
	2151	REAL(wp) ,DIMENSION(11) :: zlontao ! longitudes of tao moorings
	2152	REAL(wp) ,DIMENSION( 7) :: zlattao ! latitudes of tao moorings
	2153	REAL(wp) ,DIMENSION( 4) :: zlonrama ! longitudes of rama moorings
	2154	REAL(wp) ,DIMENSION(11) :: zlatrama ! latitudes of rama moorings
	2155	REAL(wp) ,DIMENSION( 3) :: zlonpira ! longitudes of pirata moorings
	2156	REAL(wp) ,DIMENSION( 9) :: zlatpira ! latitudes of pirata moorings
[7646]	2157	TYPE(xios_duration) :: f_op, f_of
[1725]	2158	!!----------------------------------------------------------------------
	2159	!
	2160	! frequency of the call of iom_put (attribut: freq_op)
[9019]	2161	f_op%timestep = 1 ; f_of%timestep = 0 ; CALL iom_set_field_attr('field_definition', freq_op=f_op, freq_offset=f_of)
	2162	f_op%timestep = 2 ; f_of%timestep = 0 ; CALL iom_set_field_attr('trendT_even' , freq_op=f_op, freq_offset=f_of)
	2163	f_op%timestep = 2 ; f_of%timestep = -1 ; CALL iom_set_field_attr('trendT_odd' , freq_op=f_op, freq_offset=f_of)
	2164	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('SBC' , freq_op=f_op, freq_offset=f_of)
	2165	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('SBC_scalar' , freq_op=f_op, freq_offset=f_of)
[12154]	2166	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('ABL' , freq_op=f_op, freq_offset=f_of)
[9019]	2167	f_op%timestep = nn_dttrc ; f_of%timestep = 0 ; CALL iom_set_field_attr('ptrc_T' , freq_op=f_op, freq_offset=f_of)
	2168	f_op%timestep = nn_dttrc ; f_of%timestep = 0 ; CALL iom_set_field_attr('diad_T' , freq_op=f_op, freq_offset=f_of)
[7646]	2169
[1725]	2170	! output file names (attribut: name)
[4148]	2171	DO ji = 1, 9
	2172	WRITE(cl1,'(i1)') ji
	2173	CALL iom_update_file_name('file'//cl1)
[1725]	2174	END DO
[4148]	2175	DO ji = 1, 99
	2176	WRITE(cl2,'(i2.2)') ji
	2177	CALL iom_update_file_name('file'//cl2)
	2178	END DO
[5003]	2179	DO ji = 1, 999
	2180	WRITE(cl3,'(i3.3)') ji
	2181	CALL iom_update_file_name('file'//cl3)
	2182	END DO
[1725]	2183
	2184	! Zooms...
	2185	clgrd = (/ 'T', 'U', 'W' /)
	2186	DO jg = 1, SIZE(clgrd) ! grid type
	2187	cl1 = clgrd(jg)
	2188	! Equatorial section (attributs: jbegin, ni, name_suffix)
	2189	CALL dom_ngb( 0., 0., ix, iy, cl1 )
[9930]	2190	CALL iom_set_zoom_domain_attr('Eq'//cl1, ibegin=0, jbegin=iy-1, ni=jpiglo, nj=1 )
[4148]	2191	CALL iom_get_file_attr ('Eq'//cl1, name_suffix = clsuff )
	2192	CALL iom_set_file_attr ('Eq'//cl1, name_suffix = TRIM(clsuff)//'_Eq')
	2193	CALL iom_update_file_name('Eq'//cl1)
[1725]	2194	END DO
	2195	! TAO moorings (attributs: ibegin, jbegin, name_suffix)
	2196	zlontao = (/ 137.0, 147.0, 156.0, 165.0, -180.0, -170.0, -155.0, -140.0, -125.0, -110.0, -95.0 /)
	2197	zlattao = (/ -8.0, -5.0, -2.0, 0.0, 2.0, 5.0, 8.0 /)
	2198	CALL set_mooring( zlontao, zlattao )
	2199	! RAMA moorings (attributs: ibegin, jbegin, name_suffix)
	2200	zlonrama = (/ 55.0, 67.0, 80.5, 90.0 /)
	2201	zlatrama = (/ -16.0, -12.0, -8.0, -4.0, -1.5, 0.0, 1.5, 4.0, 8.0, 12.0, 15.0 /)
	2202	CALL set_mooring( zlonrama, zlatrama )
	2203	! PIRATA moorings (attributs: ibegin, jbegin, name_suffix)
	2204	zlonpira = (/ -38.0, -23.0, -10.0 /)
	2205	zlatpira = (/ -19.0, -14.0, -8.0, 0.0, 4.0, 8.0, 12.0, 15.0, 20.0 /)
	2206	CALL set_mooring( zlonpira, zlatpira )
[9019]	2207	!
[1725]	2208	END SUBROUTINE set_xmlatt
	2209
	2210
[9019]	2211	SUBROUTINE set_mooring( plon, plat )
[1725]	2212	!!----------------------------------------------------------------------
[4148]	2213	!! * ROUTINE set_mooring *
[1725]	2214	!!
	2215	!! ** Purpose : automatic definitions of moorings xml attributs...
	2216	!!
	2217	!!----------------------------------------------------------------------
[9019]	2218	REAL(wp), DIMENSION(:), INTENT(in) :: plon, plat ! longitudes/latitudes oft the mooring
[1725]	2219	!
	2220	!!$ CHARACTER(len=1),DIMENSION(4) :: clgrd = (/ 'T', 'U', 'V', 'W' /) ! suffix name
	2221	CHARACTER(len=1),DIMENSION(1) :: clgrd = (/ 'T' /) ! suffix name
[4148]	2222	CHARACTER(len=256) :: clname ! file name
	2223	CHARACTER(len=256) :: clsuff ! suffix name
[1725]	2224	CHARACTER(len=1) :: cl1 ! 1 character
	2225	CHARACTER(len=6) :: clon,clat ! name of longitude, latitude
	2226	INTEGER :: ji, jj, jg ! loop counters
	2227	INTEGER :: ix, iy ! i-,j- index
	2228	REAL(wp) :: zlon, zlat
	2229	!!----------------------------------------------------------------------
	2230	DO jg = 1, SIZE(clgrd)
	2231	cl1 = clgrd(jg)
	2232	DO ji = 1, SIZE(plon)
	2233	DO jj = 1, SIZE(plat)
	2234	zlon = plon(ji)
	2235	zlat = plat(jj)
	2236	! modifications for RAMA moorings
	2237	IF( zlon == 67. .AND. zlat == 15. ) zlon = 65.
	2238	IF( zlon == 90. .AND. zlat <= -4. ) zlon = 95.
	2239	IF( zlon == 95. .AND. zlat == -4. ) zlat = -5.
	2240	! modifications for PIRATA moorings
	2241	IF( zlon == -38. .AND. zlat == -19. ) zlon = -34.
	2242	IF( zlon == -38. .AND. zlat == -14. ) zlon = -32.
	2243	IF( zlon == -38. .AND. zlat == -8. ) zlon = -30.
	2244	IF( zlon == -38. .AND. zlat == 0. ) zlon = -35.
	2245	IF( zlon == -23. .AND. zlat == 20. ) zlat = 21.
	2246	IF( zlon == -10. .AND. zlat == -14. ) zlat = -10.
	2247	IF( zlon == -10. .AND. zlat == -8. ) zlat = -6.
	2248	IF( zlon == -10. .AND. zlat == 4. ) THEN ; zlon = 0. ; zlat = 0. ; ENDIF
	2249	CALL dom_ngb( zlon, zlat, ix, iy, cl1 )
	2250	IF( zlon >= 0. ) THEN
	2251	IF( zlon == REAL(NINT(zlon), wp) ) THEN ; WRITE(clon, '(i3, a)') NINT( zlon), 'e'
	2252	ELSE ; WRITE(clon, '(f5.1,a)') zlon , 'e'
	2253	ENDIF
	2254	ELSE
	2255	IF( zlon == REAL(NINT(zlon), wp) ) THEN ; WRITE(clon, '(i3, a)') NINT(-zlon), 'w'
	2256	ELSE ; WRITE(clon, '(f5.1,a)') -zlon , 'w'
	2257	ENDIF
	2258	ENDIF
	2259	IF( zlat >= 0. ) THEN
	2260	IF( zlat == REAL(NINT(zlat), wp) ) THEN ; WRITE(clat, '(i2, a)') NINT( zlat), 'n'
	2261	ELSE ; WRITE(clat, '(f4.1,a)') zlat , 'n'
	2262	ENDIF
	2263	ELSE
	2264	IF( zlat == REAL(NINT(zlat), wp) ) THEN ; WRITE(clat, '(i2, a)') NINT(-zlat), 's'
	2265	ELSE ; WRITE(clat, '(f4.1,a)') -zlat , 's'
	2266	ENDIF
	2267	ENDIF
	2268	clname = TRIM(ADJUSTL(clat))//TRIM(ADJUSTL(clon))
[9930]	2269	CALL iom_set_zoom_domain_attr(TRIM(clname)//cl1, ibegin= ix-1, jbegin= iy-1, ni=1, nj=1)
[7646]	2270
[4148]	2271	CALL iom_get_file_attr (TRIM(clname)//cl1, name_suffix = clsuff )
	2272	CALL iom_set_file_attr (TRIM(clname)//cl1, name_suffix = TRIM(clsuff)//'_'//TRIM(clname))
	2273	CALL iom_update_file_name(TRIM(clname)//cl1)
[1725]	2274	END DO
	2275	END DO
	2276	END DO
	2277
	2278	END SUBROUTINE set_mooring
	2279
[4148]	2280
	2281	SUBROUTINE iom_update_file_name( cdid )
	2282	!!----------------------------------------------------------------------
	2283	!! * ROUTINE iom_update_file_name *
	2284	!!
	2285	!! ** Purpose :
	2286	!!
	2287	!!----------------------------------------------------------------------
	2288	CHARACTER(LEN=*) , INTENT(in) :: cdid
	2289	!
	2290	CHARACTER(LEN=256) :: clname
	2291	CHARACTER(LEN=20) :: clfreq
	2292	CHARACTER(LEN=20) :: cldate
[11554]	2293	CHARACTER(LEN=256) :: cltmpn !FUS needed for correct path with AGRIF
	2294	INTEGER :: iln !FUS needed for correct path with AGRIF
[4148]	2295	INTEGER :: idx
	2296	INTEGER :: jn
	2297	INTEGER :: itrlen
	2298	INTEGER :: iyear, imonth, iday, isec
	2299	REAL(wp) :: zsec
	2300	LOGICAL :: llexist
[7646]	2301	TYPE(xios_duration) :: output_freq
[4148]	2302	!!----------------------------------------------------------------------
[9019]	2303	!
	2304	DO jn = 1, 2
	2305	!
[7646]	2306	output_freq = xios_duration(0,0,0,0,0,0)
	2307	IF( jn == 1 ) CALL iom_get_file_attr( cdid, name = clname, output_freq = output_freq )
[4148]	2308	IF( jn == 2 ) CALL iom_get_file_attr( cdid, name_suffix = clname )
[9019]	2309	!
[4148]	2310	IF ( TRIM(clname) /= '' ) THEN
[9019]	2311	!
[4148]	2312	idx = INDEX(clname,'@expname@') + INDEX(clname,'@EXPNAME@')
	2313	DO WHILE ( idx /= 0 )
	2314	clname = clname(1:idx-1)//TRIM(cexper)//clname(idx+9:LEN_TRIM(clname))
	2315	idx = INDEX(clname,'@expname@') + INDEX(clname,'@EXPNAME@')
	2316	END DO
[9019]	2317	!
[4148]	2318	idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
	2319	DO WHILE ( idx /= 0 )
[7646]	2320	IF ( output_freq%timestep /= 0) THEN
	2321	WRITE(clfreq,'(I18,A2)')INT(output_freq%timestep),'ts'
	2322	itrlen = LEN_TRIM(ADJUSTL(clfreq))
[7764]	2323	ELSE IF ( output_freq%second /= 0 ) THEN
	2324	WRITE(clfreq,'(I19,A1)')INT(output_freq%second),'s'
	2325	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2326	ELSE IF ( output_freq%minute /= 0 ) THEN
[7768]	2327	WRITE(clfreq,'(I18,A2)')INT(output_freq%minute),'mi'
[7764]	2328	itrlen = LEN_TRIM(ADJUSTL(clfreq))
[7646]	2329	ELSE IF ( output_freq%hour /= 0 ) THEN
	2330	WRITE(clfreq,'(I19,A1)')INT(output_freq%hour),'h'
	2331	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2332	ELSE IF ( output_freq%day /= 0 ) THEN
	2333	WRITE(clfreq,'(I19,A1)')INT(output_freq%day),'d'
	2334	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2335	ELSE IF ( output_freq%month /= 0 ) THEN
	2336	WRITE(clfreq,'(I19,A1)')INT(output_freq%month),'m'
	2337	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2338	ELSE IF ( output_freq%year /= 0 ) THEN
	2339	WRITE(clfreq,'(I19,A1)')INT(output_freq%year),'y'
	2340	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2341	ELSE
[4148]	2342	CALL ctl_stop('error in the name of file id '//TRIM(cdid), &
	2343	& ' attribute output_freq is undefined -> cannot replace @freq@ in '//TRIM(clname) )
[7646]	2344	ENDIF
	2345	clname = clname(1:idx-1)//TRIM(ADJUSTL(clfreq))//clname(idx+6:LEN_TRIM(clname))
	2346	idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
[4148]	2347	END DO
[9019]	2348	!
[4148]	2349	idx = INDEX(clname,'@startdate@') + INDEX(clname,'@STARTDATE@')
	2350	DO WHILE ( idx /= 0 )
[6140]	2351	cldate = iom_sdate( fjulday - rdt / rday )
[4148]	2352	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+11:LEN_TRIM(clname))
	2353	idx = INDEX(clname,'@startdate@') + INDEX(clname,'@STARTDATE@')
	2354	END DO
[9019]	2355	!
[4148]	2356	idx = INDEX(clname,'@startdatefull@') + INDEX(clname,'@STARTDATEFULL@')
	2357	DO WHILE ( idx /= 0 )
[6140]	2358	cldate = iom_sdate( fjulday - rdt / rday, ldfull = .TRUE. )
[4148]	2359	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+15:LEN_TRIM(clname))
	2360	idx = INDEX(clname,'@startdatefull@') + INDEX(clname,'@STARTDATEFULL@')
	2361	END DO
[9019]	2362	!
[4148]	2363	idx = INDEX(clname,'@enddate@') + INDEX(clname,'@ENDDATE@')
	2364	DO WHILE ( idx /= 0 )
[6140]	2365	cldate = iom_sdate( fjulday + rdt / rday * REAL( nitend - nit000, wp ), ld24 = .TRUE. )
[4148]	2366	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+9:LEN_TRIM(clname))
	2367	idx = INDEX(clname,'@enddate@') + INDEX(clname,'@ENDDATE@')
	2368	END DO
[9019]	2369	!
[4148]	2370	idx = INDEX(clname,'@enddatefull@') + INDEX(clname,'@ENDDATEFULL@')
	2371	DO WHILE ( idx /= 0 )
[6140]	2372	cldate = iom_sdate( fjulday + rdt / rday * REAL( nitend - nit000, wp ), ld24 = .TRUE., ldfull = .TRUE. )
[4148]	2373	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+13:LEN_TRIM(clname))
	2374	idx = INDEX(clname,'@enddatefull@') + INDEX(clname,'@ENDDATEFULL@')
	2375	END DO
[9019]	2376	!
[11554]	2377	!FUS IF( jn == 1 .AND. TRIM(Agrif_CFixed()) /= '0' ) clname = TRIM(Agrif_CFixed())//"_"//TRIM(clname)
	2378	!FUS see comment line 700
	2379	IF( jn == 1 .AND. TRIM(Agrif_CFixed()) /= '0' ) THEN
	2380	iln = INDEX(clname,'/',BACK=.true.)
	2381	cltmpn = clname(1:iln)
	2382	clname = clname(iln+1:LEN_TRIM(clname))
	2383	clname = TRIM(cltmpn)//TRIM(Agrif_CFixed())//'_'//TRIM(clname)
	2384	ENDIF
	2385	!FUS
[4148]	2386	IF( jn == 1 ) CALL iom_set_file_attr( cdid, name = clname )
	2387	IF( jn == 2 ) CALL iom_set_file_attr( cdid, name_suffix = clname )
[9019]	2388	!
[4148]	2389	ENDIF
[9019]	2390	!
[4148]	2391	END DO
[9019]	2392	!
[4148]	2393	END SUBROUTINE iom_update_file_name
	2394
	2395
	2396	FUNCTION iom_sdate( pjday, ld24, ldfull )
	2397	!!----------------------------------------------------------------------
	2398	!! * ROUTINE iom_sdate *
	2399	!!
	2400	!! ** Purpose : send back the date corresponding to the given julian day
	2401	!!----------------------------------------------------------------------
[9019]	2402	REAL(wp), INTENT(in ) :: pjday ! julian day
	2403	LOGICAL , INTENT(in ), OPTIONAL :: ld24 ! true to force 24:00 instead of 00:00
	2404	LOGICAL , INTENT(in ), OPTIONAL :: ldfull ! true to get the compleate date: yyyymmdd_hh:mm:ss
[4148]	2405	!
	2406	CHARACTER(LEN=20) :: iom_sdate
	2407	CHARACTER(LEN=50) :: clfmt ! format used to write the date
	2408	INTEGER :: iyear, imonth, iday, ihour, iminute, isec
	2409	REAL(wp) :: zsec
	2410	LOGICAL :: ll24, llfull
[9019]	2411	!!----------------------------------------------------------------------
[4148]	2412	!
	2413	IF( PRESENT(ld24) ) THEN ; ll24 = ld24
	2414	ELSE ; ll24 = .FALSE.
	2415	ENDIF
[9019]	2416	!
[4148]	2417	IF( PRESENT(ldfull) ) THEN ; llfull = ldfull
	2418	ELSE ; llfull = .FALSE.
	2419	ENDIF
[9019]	2420	!
[4148]	2421	CALL ju2ymds( pjday, iyear, imonth, iday, zsec )
	2422	isec = NINT(zsec)
[9019]	2423	!
[4148]	2424	IF ( ll24 .AND. isec == 0 ) THEN ! 00:00 of the next day -> move to 24:00 of the current day
	2425	CALL ju2ymds( pjday - 1., iyear, imonth, iday, zsec )
	2426	isec = 86400
	2427	ENDIF
[9019]	2428	!
[4148]	2429	IF( iyear < 10000 ) THEN ; clfmt = "i4.4,2i2.2" ! format used to write the date
	2430	ELSE ; WRITE(clfmt, "('i',i1,',2i2.2')") INT(LOG10(REAL(iyear,wp))) + 1
	2431	ENDIF
[9019]	2432	!
[5656]	2433	!$AGRIF_DO_NOT_TREAT
[9019]	2434	! needed in the conv
[4148]	2435	IF( llfull ) THEN
	2436	clfmt = TRIM(clfmt)//",'_',i2.2,':',i2.2,':',i2.2"
	2437	ihour = isec / 3600
	2438	isec = MOD(isec, 3600)
	2439	iminute = isec / 60
	2440	isec = MOD(isec, 60)
	2441	WRITE(iom_sdate, '('//TRIM(clfmt)//')') iyear, imonth, iday, ihour, iminute, isec ! date of the end of run
	2442	ELSE
	2443	WRITE(iom_sdate, '('//TRIM(clfmt)//')') iyear, imonth, iday ! date of the end of run
	2444	ENDIF
[5656]	2445	!$AGRIF_END_DO_NOT_TREAT
[9019]	2446	!
[4148]	2447	END FUNCTION iom_sdate
	2448
[1359]	2449	#else
[9019]	2450	!!----------------------------------------------------------------------
	2451	!! NOT 'key_iomput' a few dummy routines
	2452	!!----------------------------------------------------------------------
[4152]	2453	SUBROUTINE iom_setkt( kt, cdname )
	2454	INTEGER , INTENT(in):: kt
	2455	CHARACTER(LEN=*), INTENT(in) :: cdname
	2456	IF( .FALSE. ) WRITE(numout,*) kt, cdname ! useless test to avoid compilation warnings
[1359]	2457	END SUBROUTINE iom_setkt
	2458
[4152]	2459	SUBROUTINE iom_context_finalize( cdname )
	2460	CHARACTER(LEN=*), INTENT(in) :: cdname
	2461	IF( .FALSE. ) WRITE(numout,*) cdname ! useless test to avoid compilation warnings
	2462	END SUBROUTINE iom_context_finalize
	2463
[1359]	2464	#endif
[4689]	2465
	2466	LOGICAL FUNCTION iom_use( cdname )
	2467	CHARACTER(LEN=*), INTENT(in) :: cdname
	2468	#if defined key_iomput
	2469	iom_use = xios_field_is_active( cdname )
	2470	#else
	2471	iom_use = .FALSE.
	2472	#endif
	2473	END FUNCTION iom_use
[11536]	2474
	2475	SUBROUTINE iom_miss_val( cdname, pmiss_val )
	2476	CHARACTER(LEN=*), INTENT(in ) :: cdname
	2477	REAL(wp) , INTENT(out) :: pmiss_val
	2478	#if defined key_iomput
	2479	! get missing value
	2480	CALL xios_get_field_attr( cdname, default_value = pmiss_val )
	2481	#else
	2482	IF( .FALSE. ) WRITE(numout,*) cdname, pmiss_val ! useless test to avoid compilation warnings
	2483	#endif
	2484	END SUBROUTINE iom_miss_val
	2485
[544]	2486	!!======================================================================
	2487	END MODULE iom

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