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sette_reference-configurations.sh in NEMO/branches/2019/fix_sette_ticket2239 – NEMO

source: NEMO/branches/2019/fix_sette_ticket2239/sette_reference-configurations.sh @ 11036

Last change on this file since 11036 was 10755, checked in by mathiot, 5 years ago

changes to avoid messup the validation directory revision number in case revision of the src is changed between the start and the end of the sette job + change order of the config in param to start the slowest config first

  • Property svn:executable set to *
File size: 60.5 KB
Line 
1#!/bin/bash
2############################################################
3# Author : Simona Flavoni for NEMO
4# Contact: sflod@locean-ipsl.upmc.fr
5# 2013   : A.C. Coward added options for testing with XIOS in dettached mode
6#
7# sette.sh   : principal script of SET TEsts for NEMO (SETTE)
8# ----------------------------------------------------------------------
9# NEMO/SETTE , NEMO Consortium (2010)
10# Software governed by the CeCILL licence     (NEMOGCM/NEMO_CeCILL.txt)
11# ----------------------------------------------------------------------
12#
13#############################################################
14#set -vx
15set -o posix
16#set -u
17#set -e
18# ===========
19# DESCRIPTION
20# ===========
21#
22# Variables to be checked by user:
23#
24# COMPILER          : name of compiler as defined in NEMOGCM/ARCH directory
25# BATCH_COMMAND_PAR :  name of the command for submitting parallel batch jobs
26# BATCH_COMMAND_SEQ :  name of the command for submitting sequential batch jobs 
27# INTERACT_FLAG     : flag to run in interactive mode "yes"
28#                           to run in batch mode "no"
29# MPIRUN_FLAG       : flag to run in parallel (MPI) "yes"
30#                           to run in sequential mode (NB_PROC = 1) "no"
31# USING_XIOS        : flag to control the activation of key_iomput
32#                      "yes" to compile using key_iomput and link to the external XIOS library
33#                      "no"  to compile without key_iomput and link to the old IOIPSL library
34# USING_MPMD        : flag to control the use of stand-alone IO servers
35#                     requires USING_XIOS="yes"
36#                      "yes" to run in MPMD (detached) mode with stand-alone IO servers
37#                      "no"  to run in SPMD (attached) mode without separate IO servers
38# NUM_XIOSERVERS    : number of stand-alone IO servers to employ
39#                     set to zero if USING_MPMD="no"
40#
41# Principal script is sette.sh, that calls
42#
43#  makenemo  : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
44#              and links to nemo in ${CONFIG_NAME}/EXP00)
45#
46#  param.cfg : sets and loads following directories:
47#
48#   FORCING_DIR         : is the directory for forcing files (tarfile)
49#   INPUT_DIR           : is the directory for input files storing
50#   TMPDIR              : is the temporary directory (if needed)
51#   NEMO_VALIDATION_DIR : is the validation directory
52#
53#   (NOTE: this file is the same for all configrations to be tested with sette)
54#
55#   all_functions.sh : loads functions used by sette (note: new functions can be added here)
56#   set_namelist     : function declared in all_functions that sets namelist parameters
57#   post_test_tidyup : creates validation storage directory and copies required output files
58#                      (run.stat and ocean.output) in it after execution of test.
59#
60#  VALIDATION tree is:
61#
62#   NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
63#
64#  prepare_exe_dir.sh : defines and creates directory where the test is executed
65#                       execution directory takes name of TEST_NAME defined for every test
66#                       in sette.sh. (each test in executed in its own directory)
67#
68#  set_valid_dir       : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
69#
70#  clean_valid_dir    : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
71#                       ( not doing it could lead to false positive )
72#
73#  prepare_job.sh     : to generate the script run_job.sh
74#
75#  fcm_job.sh         : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
76#                        see sette.sh and BATCH_TEMPLATE directory
77#
78#  NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
79#        can be found paths to the input tar file)
80#  NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
81#        directory
82#  NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
83#        remain in ${NEW_CONF}/EXP00
84#
85#  NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
86#        executed commands
87#
88#  NOTE: if sette.sh is stopped in output.sette there is written the last command
89#        executed by sette.sh
90#
91# example use: ./sette.sh
92#########################################################################################
93#
94# LOAD param value
95SETTE_DIR=$(cd $(dirname "$0"); pwd)
96MAIN_DIR=$(dirname $SETTE_DIR)
97. ./param.cfg
98
99export BATCH_COMMAND_PAR=${BATCH_CMD}
100export BATCH_COMMAND_SEQ=${BATCH_CMD}
101export INTERACT_FLAG="no"
102export MPIRUN_FLAG="yes"
103export USING_XIOS="yes"
104export USING_ICEBERGS="yes"
105#
106export DEL_KEYS="key_iomput"
107if [ ${USING_XIOS} == "yes" ] 
108 then
109   export DEL_KEYS=""
110fi
111#
112export ADD_KEYS=""
113if [ ${ADD_NOSIGNEDZERO} == "yes" ]
114 then
115   export ADD_KEYS="key_nosignedzero"
116fi
117#
118# Settings which control the use of stand alone servers (only relevant if using xios)
119#
120export USING_MPMD="no"
121export NUM_XIOSERVERS=4
122export JOB_PREFIX=batch-mpmd
123#
124if [ ${USING_MPMD} == "no" ] 
125 then
126   export NUM_XIOSERVERS=0
127   export JOB_PREFIX=batch
128fi
129#
130#
131if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no" ]
132 then
133   echo "Incompatible choices. MPMD mode requires the XIOS server"
134   exit
135fi
136
137# Directory to run the tests
138CONFIG_DIR0=${MAIN_DIR}/cfgs
139TOOLS_DIR=${MAIN_DIR}/tools
140
141CMP_NAM=${1:-$COMPILER}
142# Copy job_batch_COMPILER file for specific compiler into job_batch_template
143cd ${SETTE_DIR}
144cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template || exit
145# Description of available configurations:
146# GYRE_PISCES       :
147# ORCA2_ICE_PISCES  :
148# ORCA2_OFF_PISCES  :
149# AMM12             :
150# SAS               :
151# ORCA2_ICE_OBS     :
152# AGRIF             : test AGRIF in a double zoom configuration in the nordic seas + 1 zoom in the eq. Pacific (AGRIF_DEMO)
153#                       and check that key_agrif without zoom = no key_agrif
154# SPITZ12           : regional configuration including sea-ice and tides (Spitzbergen)
155
156for config in ${TEST_CONFIGS}
157do
158
159# -----------
160# GYRE_PISCES
161# -----------
162if [ ${config} == "GYRE_PISCES" ] ;  then
163## Restartability tests for GYRE_PISCES
164    export TEST_NAME="LONG"
165    cd ${MAIN_DIR}
166    . ./makenemo -m ${CMP_NAM} -n GYRE_PISCES_ST -r GYRE_PISCES -j 8 add_key ${ADD_KEYS} del_key ${DEL_KEYS}
167    cd ${SETTE_DIR}
168    . ./param.cfg
169    . ./all_functions.sh
170    . ./prepare_exe_dir.sh
171    set_valid_dir
172    clean_valid_dir
173    JOB_FILE=${EXE_DIR}/run_job.sh
174    NPROC=8
175    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
176    cd ${EXE_DIR} 
177    set_namelist namelist_cfg cn_exp \"GYREPIS_LONG\"
178    set_namelist namelist_cfg nn_it000 1
179    set_namelist namelist_cfg nn_itend 1080
180    set_namelist namelist_cfg nn_stock  540
181    set_namelist namelist_cfg ln_linssh .true.
182    set_namelist namelist_cfg jpni 2
183    set_namelist namelist_cfg jpnj 4
184    set_namelist namelist_cfg ln_ctl .false.
185    set_namelist namelist_cfg sn_cfctl%l_config .true.
186    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
187    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
188    if [ ${USING_MPMD} == "yes" ] ; then
189       set_xio_using_server iodef.xml true
190    else
191       set_xio_using_server iodef.xml false
192    fi
193    cd ${SETTE_DIR}
194    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
195
196    cd ${SETTE_DIR}
197    export TEST_NAME="SHORT"
198    . ./prepare_exe_dir.sh
199    set_valid_dir
200    clean_valid_dir
201    cd ${EXE_DIR}
202    set_namelist namelist_cfg cn_exp \"GYREPIS_SHORT\"
203    set_namelist namelist_cfg nn_it000 541
204    set_namelist namelist_cfg nn_itend 1080
205    set_namelist namelist_cfg nn_stock 540
206    set_namelist namelist_cfg ln_rstart .true.
207    set_namelist namelist_cfg nn_rstctl 2
208    set_namelist namelist_cfg ln_linssh .true.
209    set_namelist namelist_cfg jpni 2
210    set_namelist namelist_cfg jpnj 4
211    set_namelist namelist_cfg ln_ctl .false.
212    set_namelist namelist_cfg sn_cfctl%l_config .true.
213    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
214    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
215    set_namelist namelist_top_cfg ln_rsttr .true.
216    set_namelist namelist_top_cfg nn_rsttr 2
217    set_namelist namelist_cfg cn_ocerst_in \"GYREPIS_LONG_00000540_restart\"
218    set_namelist namelist_top_cfg cn_trcrst_in \"GYREPIS_LONG_00000540_restart_trc\"
219    if [ ${USING_MPMD} == "yes" ] ; then
220       set_xio_using_server iodef.xml true
221    else
222       set_xio_using_server iodef.xml false
223    fi
224    for (( i=1; i<=$NPROC; i++)) ; do
225        L_NPROC=$(( $i - 1 ))
226        L_NPROC=`printf "%04d\n" ${L_NPROC}`
227        ln -sf ../LONG/GYREPIS_LONG_00000540_restart_${L_NPROC}.nc .
228        ln -sf ../LONG/GYREPIS_LONG_00000540_restart_trc_${L_NPROC}.nc .
229    done
230    cd ${SETTE_DIR}
231    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
232    cd ${SETTE_DIR}
233    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
234
235## Reproducibility tests for GYRE_PISCES
236    export TEST_NAME="REPRO_2_4"
237    cd ${MAIN_DIR}
238    cd ${SETTE_DIR}
239    . ./param.cfg
240    . ./all_functions.sh
241    . ./prepare_exe_dir.sh
242    set_valid_dir
243    clean_valid_dir
244    JOB_FILE=${EXE_DIR}/run_job.sh
245    NPROC=8
246    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
247    cd ${EXE_DIR}
248    set_namelist namelist_cfg cn_exp \"GYREPIS_48\"
249    set_namelist namelist_cfg nn_it000 1
250    set_namelist namelist_cfg nn_itend 1080
251    set_namelist namelist_cfg ln_linssh .true.
252    set_namelist namelist_cfg jpni 2
253    set_namelist namelist_cfg jpnj 4
254    set_namelist namelist_cfg ln_ctl .false.
255    set_namelist namelist_cfg sn_cfctl%l_config .true.
256    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
257    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
258    if [ ${USING_MPMD} == "yes" ] ; then
259       set_xio_using_server iodef.xml true
260    else
261       set_xio_using_server iodef.xml false
262    fi
263    cd ${SETTE_DIR}
264    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
265    cd ${SETTE_DIR}
266    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
267
268    cd ${SETTE_DIR}
269    export TEST_NAME="REPRO_4_2"
270    . ./prepare_exe_dir.sh
271    set_valid_dir
272    clean_valid_dir
273    JOB_FILE=${EXE_DIR}/run_job.sh
274    NPROC=8
275    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
276    cd ${EXE_DIR}
277    set_namelist namelist_cfg cn_exp \"GYREPIS_84\"
278    set_namelist namelist_cfg nn_it000 1
279    set_namelist namelist_cfg nn_itend 1080
280    set_namelist namelist_cfg ln_linssh .true.
281    set_namelist namelist_cfg jpni 4
282    set_namelist namelist_cfg jpnj 2
283    set_namelist namelist_cfg ln_ctl .false.
284    set_namelist namelist_cfg sn_cfctl%l_config .true.
285    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
286    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
287    if [ ${USING_MPMD} == "yes" ] ; then
288       set_xio_using_server iodef.xml true
289    else
290       set_xio_using_server iodef.xml false
291    fi
292    cd ${SETTE_DIR}
293    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
294    cd ${SETTE_DIR}
295    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
296
297fi
298
299# -----------------
300# ORCA2_ICE_PISCES
301# -----------------
302if [ ${config} == "ORCA2_ICE_PISCES" ] ;  then
303## Restartability tests for ORCA2_ICE_PISCES
304    export TEST_NAME="LONG"
305    cd ${MAIN_DIR}
306    . ./makenemo -m ${CMP_NAM} -n ORCA2_ICE_PISCES_ST -r ORCA2_ICE_PISCES -j 8 add_key ${ADD_KEYS} del_key ${DEL_KEYS}
307    cd ${SETTE_DIR}
308    . ./param.cfg
309    . ./all_functions.sh
310    . ./prepare_exe_dir.sh
311    set_valid_dir
312    clean_valid_dir
313    JOB_FILE=${EXE_DIR}/run_job.sh
314    NPROC=32
315    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
316    cd ${EXE_DIR}
317    set_namelist namelist_cfg cn_exp \"O2L3P_LONG\"
318    set_namelist namelist_cfg nn_it000 1
319    set_namelist namelist_cfg nn_itend 992
320    set_namelist namelist_cfg nn_stock 496
321    set_namelist namelist_cfg jpni 4
322    set_namelist namelist_cfg jpnj 8
323    set_namelist namelist_cfg ln_ctl .false.
324    set_namelist namelist_cfg sn_cfctl%l_config .true.
325    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
326    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
327    set_namelist namelist_cfg ln_use_calving .true.
328    set_namelist namelist_cfg ln_wave .true.
329    set_namelist namelist_cfg ln_cdgw .true.
330    set_namelist namelist_cfg ln_sdw  .true.
331    set_namelist namelist_cfg nn_sdrift 1
332    set_namelist namelist_cfg ln_stcor .true.
333    set_namelist namelist_cfg ln_tauwoc .true.
334    #
335    if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
336    # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
337    #
338    set_namelist namelist_ice_cfg ln_icediachk .true.
339    set_namelist namelist_top_cfg ln_trcdta .false.
340    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
341    # if not you need input files, and for tests is not necessary
342    set_namelist namelist_pisces_cfg ln_presatm .false.
343    set_namelist namelist_pisces_cfg ln_varpar .false.
344    set_namelist namelist_pisces_cfg ln_dust .false.
345    set_namelist namelist_pisces_cfg ln_solub .false.
346    set_namelist namelist_pisces_cfg ln_river .false.
347    set_namelist namelist_pisces_cfg ln_ndepo .false.
348    set_namelist namelist_pisces_cfg ln_ironsed .false.
349    set_namelist namelist_pisces_cfg ln_ironice .false.
350    set_namelist namelist_pisces_cfg ln_hydrofe .false.
351    # put ln_pisdmp to false : no restoring to global mean value
352    set_namelist namelist_pisces_cfg ln_pisdmp .false.
353    if [ ${USING_MPMD} == "yes" ] ; then
354       set_xio_using_server iodef.xml true
355    else
356       set_xio_using_server iodef.xml false
357    fi
358    cd ${SETTE_DIR}
359    . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
360   
361    cd ${SETTE_DIR}
362    export TEST_NAME="SHORT"
363    . ./prepare_exe_dir.sh
364    set_valid_dir
365    clean_valid_dir
366    cd ${EXE_DIR}
367    set_namelist namelist_cfg cn_exp \"O2L3P_SHORT\"
368    set_namelist namelist_cfg nn_it000 497
369    set_namelist namelist_cfg nn_itend 992
370    set_namelist namelist_cfg nn_stock 496
371    set_namelist namelist_cfg ln_rstart .true.
372    set_namelist namelist_cfg nn_rstctl 2
373    set_namelist namelist_cfg jpni 4
374    set_namelist namelist_cfg jpnj 8
375    set_namelist namelist_cfg ln_ctl .false.
376    set_namelist namelist_cfg sn_cfctl%l_config .true.
377    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
378    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
379    set_namelist namelist_cfg nn_test_icebergs -1
380    set_namelist namelist_cfg ln_wave .true.
381    set_namelist namelist_cfg ln_cdgw .true.
382    set_namelist namelist_cfg ln_sdw  .true.
383    set_namelist namelist_cfg nn_sdrift 1
384    set_namelist namelist_cfg ln_stcor .true.
385    set_namelist namelist_cfg ln_tauwoc .true.
386    #
387    if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
388    # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
389    #
390    set_namelist namelist_ice_cfg ln_icediachk .true.
391    set_namelist namelist_top_cfg ln_rsttr .true.
392    set_namelist namelist_top_cfg nn_rsttr 2
393    set_namelist namelist_cfg cn_ocerst_in \"O2L3P_LONG_00000496_restart\"
394    set_namelist namelist_top_cfg cn_trcrst_in \"O2L3P_LONG_00000496_restart_trc\"
395    set_namelist namelist_ice_cfg cn_icerst_in \"O2L3P_LONG_00000496_restart_ice\"
396    set_namelist namelist_top_cfg ln_trcdta .false.
397    # put ln_ironsed, ln_river, ln_ndepo, ln_dust
398    # if not you need input files, and for tests is not necessary
399    set_namelist namelist_pisces_cfg ln_presatm .false.
400    set_namelist namelist_pisces_cfg ln_varpar .false.
401    set_namelist namelist_pisces_cfg ln_dust .false.
402    set_namelist namelist_pisces_cfg ln_solub .false.
403    set_namelist namelist_pisces_cfg ln_river .false.
404    set_namelist namelist_pisces_cfg ln_ndepo .false.
405    set_namelist namelist_pisces_cfg ln_ironsed .false.
406    set_namelist namelist_pisces_cfg ln_ironice .false.
407    set_namelist namelist_pisces_cfg ln_hydrofe .false.
408    # put ln_pisdmp to false : no restoring to global mean value
409    set_namelist namelist_pisces_cfg ln_pisdmp .false.
410    for (( i=1; i<=$NPROC; i++)) ; do
411        L_NPROC=$(( $i - 1 ))
412        L_NPROC=`printf "%04d\n" ${L_NPROC}`
413        ln -sf ../LONG/O2L3P_LONG_00000496_restart_${L_NPROC}.nc .
414        ln -sf ../LONG/O2L3P_LONG_00000496_restart_trc_${L_NPROC}.nc .
415        ln -sf ../LONG/O2L3P_LONG_00000496_restart_ice_${L_NPROC}.nc .
416        if [ ${USING_ICEBERGS} == "yes" ]
417            then
418             ln -sf ../LONG/O2L3P_LONG_icebergs_00000496_restart_${L_NPROC}.nc O2L3P_LONG_00000496_restart_icebergs_${L_NPROC}.nc
419        fi
420    done
421    if [ ${USING_MPMD} == "yes" ] ; then
422       set_xio_using_server iodef.xml true
423    else
424       set_xio_using_server iodef.xml false
425    fi
426    cd ${SETTE_DIR}
427    . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
428    cd ${SETTE_DIR}
429    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
430
431## Reproducibility tests for ORCA2_ICE_PISCES
432    export TEST_NAME="REPRO_4_8"
433    cd ${MAIN_DIR}
434    cd ${SETTE_DIR}
435    . ./param.cfg
436    . ./all_functions.sh
437    . ./prepare_exe_dir.sh
438    set_valid_dir
439    clean_valid_dir
440    JOB_FILE=${EXE_DIR}/run_job.sh
441    NPROC=32
442    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
443    cd ${EXE_DIR}
444    set_namelist namelist_cfg cn_exp \"O2L3P_48\"
445    set_namelist namelist_cfg nn_it000 1
446    set_namelist namelist_cfg nn_itend 992
447    set_namelist namelist_cfg jpni 4
448    set_namelist namelist_cfg jpnj 8
449    set_namelist namelist_cfg ln_ctl .false.
450    set_namelist namelist_cfg sn_cfctl%l_config .true.
451    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
452    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
453    set_namelist namelist_cfg ln_wave .true.
454    set_namelist namelist_cfg ln_cdgw .true.
455    set_namelist namelist_cfg ln_sdw  .true.
456    set_namelist namelist_cfg nn_sdrift 1
457    set_namelist namelist_cfg ln_stcor .true.
458    set_namelist namelist_cfg ln_tauwoc .true.
459
460    if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
461    # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
462
463    set_namelist namelist_top_cfg ln_trcdta .false.
464    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
465    # if not you need input files, and for tests is not necessary
466    set_namelist namelist_pisces_cfg ln_presatm .false.
467    set_namelist namelist_pisces_cfg ln_varpar .false.
468    set_namelist namelist_pisces_cfg ln_dust .false.
469    set_namelist namelist_pisces_cfg ln_solub .false.
470    set_namelist namelist_pisces_cfg ln_river .false.
471    set_namelist namelist_pisces_cfg ln_ndepo .false.
472    set_namelist namelist_pisces_cfg ln_ironsed .false.
473    set_namelist namelist_pisces_cfg ln_ironice .false.
474    set_namelist namelist_pisces_cfg ln_hydrofe .false.
475    # put ln_pisdmp to false : no restoring to global mean value
476    set_namelist namelist_pisces_cfg ln_pisdmp .false.
477    if [ ${USING_MPMD} == "yes" ] ; then
478       set_xio_using_server iodef.xml true
479    else
480       set_xio_using_server iodef.xml false
481    fi
482    cd ${SETTE_DIR}
483    . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
484    cd ${SETTE_DIR}
485    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
486
487    cd ${SETTE_DIR}
488    export TEST_NAME="REPRO_8_4"
489    . ./prepare_exe_dir.sh
490    set_valid_dir
491    clean_valid_dir
492    JOB_FILE=${EXE_DIR}/run_job.sh
493    NPROC=32
494    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
495    cd ${EXE_DIR}
496    set_namelist namelist_cfg cn_exp \"O2L3P_84\"
497    set_namelist namelist_cfg nn_it000 1
498    set_namelist namelist_cfg nn_itend 992
499    set_namelist namelist_cfg jpni 8
500    set_namelist namelist_cfg jpnj 4
501    set_namelist namelist_cfg ln_ctl .false.
502    set_namelist namelist_cfg sn_cfctl%l_config .true.
503    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
504    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
505    set_namelist namelist_cfg ln_wave .true.
506    set_namelist namelist_cfg ln_cdgw .true.
507    set_namelist namelist_cfg ln_sdw  .true.
508    set_namelist namelist_cfg nn_sdrift 1
509    set_namelist namelist_cfg ln_stcor .true.
510    set_namelist namelist_cfg ln_tauwoc .true.
511
512    if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
513    # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
514
515    set_namelist namelist_top_cfg ln_trcdta .false.
516    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
517    # if not you need input files, and for tests is not necessary
518    set_namelist namelist_pisces_cfg ln_presatm .false.
519    set_namelist namelist_pisces_cfg ln_varpar .false.
520    set_namelist namelist_pisces_cfg ln_dust .false.
521    set_namelist namelist_pisces_cfg ln_solub .false.
522    set_namelist namelist_pisces_cfg ln_river .false.
523    set_namelist namelist_pisces_cfg ln_ndepo .false.
524    set_namelist namelist_pisces_cfg ln_ironsed .false.
525    set_namelist namelist_pisces_cfg ln_ironice .false.
526    set_namelist namelist_pisces_cfg ln_hydrofe .false.
527    # put ln_pisdmp to false : no restoring to global mean value
528    set_namelist namelist_pisces_cfg ln_pisdmp .false.
529    if [ ${USING_MPMD} == "yes" ] ; then
530       set_xio_using_server iodef.xml true
531    else
532       set_xio_using_server iodef.xml false
533    fi
534    cd ${SETTE_DIR}
535    . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
536    cd ${SETTE_DIR}
537    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
538fi
539
540# ----------------
541# ORCA2_OFF_PISCES
542# ----------------
543if [ ${config} == "ORCA2_OFF_PISCES" ] ;  then
544## Restartability tests for ORCA2_OFF_PISCES
545    export TEST_NAME="LONG"
546    cd ${MAIN_DIR}
547    . ./makenemo -m ${CMP_NAM} -n ORCA2_OFF_PISCES_ST -r ORCA2_OFF_PISCES -j 8 add_key ${ADD_KEYS} del_key ${DEL_KEYS}
548    cd ${SETTE_DIR}
549    . ./param.cfg
550    . ./all_functions.sh
551    . ./prepare_exe_dir.sh
552    set_valid_dir
553    clean_valid_dir
554    JOB_FILE=${EXE_DIR}/run_job.sh
555    NPROC=32
556    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
557    cd ${EXE_DIR}
558    set_namelist namelist_cfg cn_exp \"OFFP_LONG\"
559    set_namelist namelist_cfg nn_it000 1
560    set_namelist namelist_cfg nn_itend 380
561    set_namelist namelist_cfg nn_stock 190
562    set_namelist namelist_cfg jpni 4
563    set_namelist namelist_cfg jpnj 8
564    set_namelist namelist_cfg ln_ctl .false.
565    set_namelist namelist_cfg sn_cfctl%l_config .true.
566    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
567    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
568    set_namelist namelist_cfg ln_qsr_rgb .true.
569    set_namelist namelist_top_cfg ln_trcdta .false.
570    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
571    # if not you need input files, and for tests is not necessary
572    set_namelist namelist_pisces_cfg ln_presatm .false.
573    set_namelist namelist_pisces_cfg ln_varpar .false.
574    set_namelist namelist_pisces_cfg ln_dust .false.
575    set_namelist namelist_pisces_cfg ln_solub .false.
576    set_namelist namelist_pisces_cfg ln_river .false.
577    set_namelist namelist_pisces_cfg ln_ndepo .false.
578    set_namelist namelist_pisces_cfg ln_ironsed .false.
579    set_namelist namelist_pisces_cfg ln_ironice .false.
580    set_namelist namelist_pisces_cfg ln_hydrofe .false.
581    # put ln_pisdmp to false : no restoring to global mean value
582    set_namelist namelist_pisces_cfg ln_pisdmp .false.
583    if [ ${USING_MPMD} == "yes" ] ; then
584       set_xio_using_server iodef.xml true
585    else
586       set_xio_using_server iodef.xml false
587    fi
588    cd ${SETTE_DIR}
589    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
590   
591    cd ${SETTE_DIR}
592    export TEST_NAME="SHORT"
593    . ./prepare_exe_dir.sh
594    set_valid_dir
595    clean_valid_dir
596    cd ${EXE_DIR}
597    set_namelist namelist_cfg cn_exp \"OFFP_SHORT\"
598    set_namelist namelist_cfg nn_it000 191
599    set_namelist namelist_cfg nn_itend 380
600    set_namelist namelist_cfg nn_stock 190
601    set_namelist namelist_cfg jpni 4
602    set_namelist namelist_cfg jpnj 8
603    set_namelist namelist_cfg ln_ctl .false.
604    set_namelist namelist_cfg sn_cfctl%l_config .true.
605    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
606    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
607    set_namelist namelist_cfg ln_qsr_rgb .true.
608    set_namelist namelist_top_cfg ln_rsttr .true.
609    set_namelist namelist_top_cfg nn_rsttr 2
610    set_namelist namelist_top_cfg cn_trcrst_in \"OFFP_LONG_00000190_restart_trc\"
611    for (( i=1; i<=$NPROC; i++)) ; do
612        L_NPROC=$(( $i - 1 ))
613        L_NPROC=`printf "%04d\n" ${L_NPROC}`
614        ln -sf ../LONG/OFFP_LONG_00000190_restart_trc_${L_NPROC}.nc .
615    done
616    # put ln_ironsed, ln_river, ln_ndepo, ln_dust
617    # if not you need input files, and for tests is not necessary
618    set_namelist namelist_pisces_cfg ln_presatm .false.
619    set_namelist namelist_pisces_cfg ln_varpar .false.
620    set_namelist namelist_pisces_cfg ln_dust .false.
621    set_namelist namelist_pisces_cfg ln_solub .false.
622    set_namelist namelist_pisces_cfg ln_river .false.
623    set_namelist namelist_pisces_cfg ln_ndepo .false.
624    set_namelist namelist_pisces_cfg ln_ironsed .false.
625    set_namelist namelist_pisces_cfg ln_ironice .false.
626    set_namelist namelist_pisces_cfg ln_hydrofe .false.
627    # put ln_pisdmp to false : no restoring to global mean value
628    set_namelist namelist_pisces_cfg ln_pisdmp .false.
629    if [ ${USING_MPMD} == "yes" ] ; then
630       set_xio_using_server iodef.xml true
631    else
632       set_xio_using_server iodef.xml false
633    fi
634    cd ${SETTE_DIR}
635    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME}  ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
636    cd ${SETTE_DIR}
637    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
638
639## Reproducibility tests for ORCA2_OFF_PISCES
640    export TEST_NAME="REPRO_4_8"
641    cd ${MAIN_DIR}
642    cd ${SETTE_DIR}
643    . ./param.cfg
644    . ./all_functions.sh
645    . ./prepare_exe_dir.sh
646    set_valid_dir
647    clean_valid_dir
648    JOB_FILE=${EXE_DIR}/run_job.sh
649    NPROC=32
650    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
651    cd ${EXE_DIR}
652    set_namelist namelist_cfg cn_exp \"OFFP_48\"
653    set_namelist namelist_cfg nn_it000 1
654    set_namelist namelist_cfg nn_itend 380
655    set_namelist namelist_cfg jpni 4
656    set_namelist namelist_cfg jpnj 8
657    set_namelist namelist_cfg ln_ctl .false.
658    set_namelist namelist_cfg sn_cfctl%l_config .true.
659    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
660    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
661    set_namelist namelist_cfg ln_qsr_rgb .true.
662    set_namelist namelist_top_cfg ln_trcdta .false.
663    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
664    # if not you need input files, and for tests is not necessary
665    set_namelist namelist_pisces_cfg ln_presatm .false.
666    set_namelist namelist_pisces_cfg ln_varpar .false.
667    set_namelist namelist_pisces_cfg ln_dust .false.
668    set_namelist namelist_pisces_cfg ln_solub .false.
669    set_namelist namelist_pisces_cfg ln_river .false.
670    set_namelist namelist_pisces_cfg ln_ndepo .false.
671    set_namelist namelist_pisces_cfg ln_ironsed .false.
672    set_namelist namelist_pisces_cfg ln_ironice .false.
673    set_namelist namelist_pisces_cfg ln_hydrofe .false.
674    # put ln_pisdmp to false : no restoring to global mean value
675    set_namelist namelist_pisces_cfg ln_pisdmp .false.
676    if [ ${USING_MPMD} == "yes" ] ; then
677       set_xio_using_server iodef.xml true
678    else
679       set_xio_using_server iodef.xml false
680    fi
681    cd ${SETTE_DIR}
682    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
683    cd ${SETTE_DIR}
684    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
685
686    cd ${SETTE_DIR}
687    export TEST_NAME="REPRO_8_4"
688    . ./prepare_exe_dir.sh
689    set_valid_dir
690    clean_valid_dir
691    JOB_FILE=${EXE_DIR}/run_job.sh
692    NPROC=32
693    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
694    cd ${EXE_DIR}
695    set_namelist namelist_cfg cn_exp \"OFFP_84\"
696    set_namelist namelist_cfg nn_it000 1
697    set_namelist namelist_cfg nn_itend 380
698    set_namelist namelist_cfg jpni 8
699    set_namelist namelist_cfg jpnj 4
700    set_namelist namelist_cfg ln_ctl .false.
701    set_namelist namelist_cfg sn_cfctl%l_config .true.
702    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
703    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
704    set_namelist namelist_cfg ln_qsr_rgb .true.
705    set_namelist namelist_top_cfg ln_trcdta .false.
706    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
707    # if not you need input files, and for tests is not necessary
708    set_namelist namelist_pisces_cfg ln_presatm .false.
709    set_namelist namelist_pisces_cfg ln_varpar .false.
710    set_namelist namelist_pisces_cfg ln_dust .false.
711    set_namelist namelist_pisces_cfg ln_solub .false.
712    set_namelist namelist_pisces_cfg ln_river .false.
713    set_namelist namelist_pisces_cfg ln_ndepo .false.
714    set_namelist namelist_pisces_cfg ln_ironsed .false.
715    set_namelist namelist_pisces_cfg ln_ironice .false.
716    set_namelist namelist_pisces_cfg ln_hydrofe .false.
717    # put ln_pisdmp to false : no restoring to global mean value
718    set_namelist namelist_pisces_cfg ln_pisdmp .false.
719    if [ ${USING_MPMD} == "yes" ] ; then
720       set_xio_using_server iodef.xml true
721    else
722       set_xio_using_server iodef.xml false
723    fi
724    cd ${SETTE_DIR}
725    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
726    cd ${SETTE_DIR}
727    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
728fi
729
730# -----
731# AMM12
732# -----
733if [ ${config} == "AMM12" ] ;  then
734    ## Restartability tests for AMM12
735    export TEST_NAME="LONG"
736    cd ${MAIN_DIR}
737    . ./makenemo -m ${CMP_NAM} -n AMM12_ST -r AMM12 -j 8 add_key ${ADD_KEYS} del_key ${DEL_KEYS}
738    cd ${SETTE_DIR}
739    . ./param.cfg
740    . ./all_functions.sh
741    . ./prepare_exe_dir.sh
742    set_valid_dir
743    clean_valid_dir
744    JOB_FILE=${EXE_DIR}/run_job.sh
745    NPROC=32
746    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
747    cd ${EXE_DIR}
748    set_namelist namelist_cfg cn_exp \"AMM12_LONG\"
749    set_namelist namelist_cfg nn_it000 1
750    set_namelist namelist_cfg nn_itend 576
751    set_namelist namelist_cfg nn_stock 288
752    set_namelist namelist_cfg jpni 4
753    set_namelist namelist_cfg jpnj 8
754    set_namelist namelist_cfg ln_ctl .false.
755    set_namelist namelist_cfg sn_cfctl%l_config .true.
756    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
757    if [ ${USING_MPMD} == "yes" ] ; then
758       set_xio_using_server iodef.xml true
759    else
760       set_xio_using_server iodef.xml false
761    fi
762    cd ${SETTE_DIR}
763    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
764
765    cd ${SETTE_DIR}
766    export TEST_NAME="SHORT"
767    . ./prepare_exe_dir.sh
768    set_valid_dir
769    clean_valid_dir
770    cd ${EXE_DIR}
771    set_namelist namelist_cfg cn_exp \"AMM12_SHORT\"
772    set_namelist namelist_cfg nn_it000 289
773    set_namelist namelist_cfg nn_itend 576
774    set_namelist namelist_cfg jpni 4
775    set_namelist namelist_cfg jpnj 8
776    set_namelist namelist_cfg ln_ctl .false.
777    set_namelist namelist_cfg sn_cfctl%l_config .true.
778    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
779    set_namelist namelist_cfg ln_rstart .true.
780    set_namelist namelist_cfg nn_rstctl 2
781    set_namelist namelist_cfg cn_ocerst_in \"AMM12_LONG_00000288_restart\"
782    set_namelist namelist_cfg nn_date0 20120102
783    for (( i=1; i<=$NPROC; i++)) ; do
784        L_NPROC=$(( $i - 1 ))
785        L_NPROC=`printf "%04d\n" ${L_NPROC}`
786        ln -sf ../LONG/AMM12_LONG_00000288_restart_${L_NPROC}.nc .
787    done
788    if [ ${USING_MPMD} == "yes" ] ; then
789       set_xio_using_server iodef.xml true
790    else
791       set_xio_using_server iodef.xml false
792    fi
793    cd ${SETTE_DIR}
794    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
795    cd ${SETTE_DIR}
796    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
797
798## Reproducibility tests for AMM12
799    export TEST_NAME="REPRO_8_4"
800    cd ${MAIN_DIR}
801    cd ${SETTE_DIR}
802    . ./param.cfg
803    . ./all_functions.sh
804    . ./prepare_exe_dir.sh
805    set_valid_dir
806    clean_valid_dir
807    JOB_FILE=${EXE_DIR}/run_job.sh
808    NPROC=32
809    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
810    cd ${EXE_DIR}
811    set_namelist namelist_cfg cn_exp \"AMM12_84\"
812    set_namelist namelist_cfg nn_it000 1
813    set_namelist namelist_cfg nn_itend 576
814    set_namelist namelist_cfg jpni 8
815    set_namelist namelist_cfg jpnj 4
816    set_namelist namelist_cfg ln_ctl .false.
817    set_namelist namelist_cfg sn_cfctl%l_config .true.
818    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
819    if [ ${USING_MPMD} == "yes" ] ; then
820       set_xio_using_server iodef.xml true
821    else
822       set_xio_using_server iodef.xml false
823    fi
824    cd ${SETTE_DIR}
825    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
826    cd ${SETTE_DIR}
827    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
828
829    cd ${SETTE_DIR}
830    export TEST_NAME="REPRO_4_8"
831    . ./prepare_exe_dir.sh
832    set_valid_dir
833    clean_valid_dir
834    JOB_FILE=${EXE_DIR}/run_job.sh
835    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
836    cd ${EXE_DIR}
837    set_namelist namelist_cfg cn_exp \"AMM12_48\"
838    set_namelist namelist_cfg nn_it000 1
839    set_namelist namelist_cfg nn_itend 576
840    set_namelist namelist_cfg jpni 4
841    set_namelist namelist_cfg jpnj 8
842    set_namelist namelist_cfg ln_ctl .false.
843    set_namelist namelist_cfg sn_cfctl%l_config .true.
844    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
845    if [ ${USING_MPMD} == "yes" ] ; then
846       set_xio_using_server iodef.xml true
847    else
848       set_xio_using_server iodef.xml false
849    fi
850    cd ${SETTE_DIR}
851    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
852    cd ${SETTE_DIR}
853    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
854fi
855
856
857# ---------
858# ORCA2_SAS
859# ---------
860if [ ${config} == "SAS" ] ;  then
861## Restartability tests
862    export TEST_NAME="LONG"
863    cd ${MAIN_DIR}
864    . ./makenemo -m ${CMP_NAM} -n ORCA2_SAS_ICE_ST -r ORCA2_SAS_ICE -j 8 add_key ${ADD_KEYS} del_key ${DEL_KEYS}
865    cd ${SETTE_DIR}
866    . ./param.cfg
867    . ./all_functions.sh
868    . ./prepare_exe_dir.sh
869    set_valid_dir
870    clean_valid_dir
871    JOB_FILE=${EXE_DIR}/run_job.sh
872    NPROC=32
873    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
874    cd ${EXE_DIR}
875    set_namelist namelist_cfg cn_exp \"SAS\"
876    set_namelist namelist_cfg nn_it000 1
877    set_namelist namelist_cfg nn_itend 256
878    set_namelist namelist_cfg nn_stock 128
879    set_namelist namelist_cfg jpni 4
880    set_namelist namelist_cfg jpnj 8
881    set_namelist namelist_cfg ln_ctl .false.
882    set_namelist namelist_cfg sn_cfctl%l_config .true.
883    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
884    set_namelist namelist_ice_cfg ln_icediachk .true.
885    if [ ${USING_MPMD} == "yes" ] ; then
886       set_xio_using_server iodef.xml true
887    else
888       set_xio_using_server iodef.xml false
889    fi
890    cd ${SETTE_DIR}
891    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
892
893    cd ${SETTE_DIR}
894    export TEST_NAME="SHORT"
895    . ./prepare_exe_dir.sh
896    set_valid_dir
897    clean_valid_dir
898    cd ${EXE_DIR}
899    set_namelist namelist_cfg cn_exp \"SAS\"
900    set_namelist namelist_cfg nn_it000 129
901    set_namelist namelist_cfg nn_itend 256
902    set_namelist namelist_cfg jpni 4
903    set_namelist namelist_cfg jpnj 8
904    set_namelist namelist_cfg ln_ctl .false.
905    set_namelist namelist_cfg sn_cfctl%l_config .true.
906    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
907    set_namelist namelist_cfg ln_rstart .true.
908    set_namelist namelist_cfg nn_rstctl 2
909    set_namelist namelist_cfg nn_date0 010109
910    set_namelist namelist_cfg cn_ocerst_in \"SAS_00000128_restart\"
911    set_namelist namelist_ice_cfg cn_icerst_in \"SAS_00000128_restart_ice\"
912    if [ ${USING_MPMD} == "yes" ] ; then
913       set_xio_using_server iodef.xml true
914    else
915       set_xio_using_server iodef.xml false
916    fi
917    for (( i=1; i<=$NPROC; i++)) ; do
918        L_NPROC=$(( $i - 1 ))
919        L_NPROC=`printf "%04d\n" ${L_NPROC}`
920        ln -sf ../LONG/SAS_00000128_restart_${L_NPROC}.nc .
921        ln -sf ../LONG/SAS_00000128_restart_ice_${L_NPROC}.nc .
922    done
923    cd ${SETTE_DIR}
924    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
925    cd ${SETTE_DIR}
926    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
927
928## Reproducibility tests
929    export TEST_NAME="REPRO_4_8"
930    cd ${MAIN_DIR}
931    cd ${SETTE_DIR}
932    . ./param.cfg
933    . ./all_functions.sh
934    . ./prepare_exe_dir.sh
935    set_valid_dir
936    clean_valid_dir
937    JOB_FILE=${EXE_DIR}/run_job.sh
938    NPROC=32
939    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
940    cd ${EXE_DIR}
941    set_namelist namelist_cfg cn_exp \"SAS_48\"
942    set_namelist namelist_cfg nn_it000 1
943    set_namelist namelist_cfg nn_itend 80
944    set_namelist namelist_cfg jpni 4
945    set_namelist namelist_cfg jpnj 8
946    set_namelist namelist_cfg ln_ctl .false.
947    set_namelist namelist_cfg sn_cfctl%l_config .true.
948    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
949    if [ ${USING_MPMD} == "yes" ] ; then
950       set_xio_using_server iodef.xml true
951    else
952       set_xio_using_server iodef.xml false
953    fi
954    cd ${SETTE_DIR}
955    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
956    cd ${SETTE_DIR}
957    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
958
959    cd ${SETTE_DIR}
960    export TEST_NAME="REPRO_8_4"
961    . ./prepare_exe_dir.sh
962    set_valid_dir
963    clean_valid_dir
964    JOB_FILE=${EXE_DIR}/run_job.sh
965    NPROC=32
966    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
967    cd ${EXE_DIR}
968    set_namelist namelist_cfg cn_exp \"SAS_84\"
969    set_namelist namelist_cfg nn_it000 1
970    set_namelist namelist_cfg nn_itend 80
971    set_namelist namelist_cfg jpni 8
972    set_namelist namelist_cfg jpnj 4
973    set_namelist namelist_cfg ln_ctl .false.
974    set_namelist namelist_cfg sn_cfctl%l_config .true.
975    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
976    if [ ${USING_MPMD} == "yes" ] ; then
977       set_xio_using_server iodef.xml true
978    else
979       set_xio_using_server iodef.xml false
980    fi
981    cd ${SETTE_DIR}
982    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
983    cd ${SETTE_DIR}
984    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
985
986fi
987
988
989# --------------
990# ORCA2_ICE_OBS
991# --------------
992## Test assimilation interface code, OBS and ASM for reproducibility
993## Restartability not tested (ASM code not restartable while increments are being applied)
994if [ ${config} == "ORCA2_ICE_OBS" ] ; then
995## Reproducibility tests
996    export TEST_NAME="REPRO_4_8"
997    cd ${MAIN_DIR}
998    . ./makenemo -m ${CMP_NAM} -n ORCA2_ICE_OBS_ST -r ORCA2_ICE_PISCES -d "OCE ICE"  -j 8 add_key "key_asminc ${ADD_KEYS}" del_key "key_top"
999    cd ${SETTE_DIR}
1000    . ./param.cfg
1001    . ./all_functions.sh
1002    . ./prepare_exe_dir.sh
1003    set_valid_dir
1004    clean_valid_dir
1005    JOB_FILE=${EXE_DIR}/run_job.sh
1006    NPROC=32
1007    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1008    cd ${EXE_DIR}
1009    set_namelist namelist_cfg cn_exp \"O2L3OBS_48\"
1010    set_namelist namelist_cfg nn_it000 1
1011    set_namelist namelist_cfg nn_itend 80
1012    set_namelist namelist_cfg ln_read_cfg .true.
1013    set_namelist namelist_cfg jpni 4
1014    set_namelist namelist_cfg jpnj 8
1015    set_namelist namelist_cfg ln_ctl .false.
1016    set_namelist namelist_cfg sn_cfctl%l_config .true.
1017    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1018    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
1019    set_namelist namelist_cfg ln_diaobs .true.
1020    set_namelist namelist_cfg ln_t3d .true.
1021    set_namelist namelist_cfg ln_s3d .true.
1022    set_namelist namelist_cfg ln_sst .true.
1023    set_namelist namelist_cfg ln_sla .true.
1024    set_namelist namelist_cfg ln_sic .true.
1025    set_namelist namelist_cfg ln_vel3d .true.
1026    set_namelist namelist_cfg ln_bkgwri .true.
1027    set_namelist namelist_cfg ln_trainc .true.
1028    set_namelist namelist_cfg ln_dyninc .true.
1029    set_namelist namelist_cfg ln_sshinc .true.
1030    set_namelist namelist_cfg ln_asmiau .true.
1031    #remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration)
1032    set_namelist namelist_top_cfg ln_trcdta .false.
1033    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
1034    # if not you need input files, and for tests is not necessary
1035    set_namelist namelist_pisces_cfg ln_presatm .false.
1036    set_namelist namelist_pisces_cfg ln_varpar .false.
1037    set_namelist namelist_pisces_cfg ln_dust .false.
1038    set_namelist namelist_pisces_cfg ln_solub .false.
1039    set_namelist namelist_pisces_cfg ln_river .false.
1040    set_namelist namelist_pisces_cfg ln_ndepo .false.
1041    set_namelist namelist_pisces_cfg ln_ironsed .false.
1042    set_namelist namelist_pisces_cfg ln_ironice .false.
1043    set_namelist namelist_pisces_cfg ln_hydrofe .false.
1044    if [ ${USING_MPMD} == "yes" ] ; then
1045       set_xio_using_server iodef.xml true
1046    else
1047       set_xio_using_server iodef.xml false
1048    fi
1049    cd ${SETTE_DIR}
1050    . ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1051    cd ${SETTE_DIR}
1052    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1053
1054   cd ${SETTE_DIR}
1055    export TEST_NAME="REPRO_8_4"
1056    . ./prepare_exe_dir.sh
1057    set_valid_dir
1058    clean_valid_dir
1059    JOB_FILE=${EXE_DIR}/run_job.sh
1060    NPROC=32
1061    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1062    cd ${EXE_DIR}
1063    set_namelist namelist_cfg cn_exp \"O2L3OBS_84\"
1064    set_namelist namelist_cfg nn_it000 1
1065    set_namelist namelist_cfg nn_itend 80
1066    set_namelist namelist_cfg ln_read_cfg .true.
1067    set_namelist namelist_cfg jpni 8
1068    set_namelist namelist_cfg jpnj 4
1069    set_namelist namelist_cfg ln_ctl .false.
1070    set_namelist namelist_cfg sn_cfctl%l_config .true.
1071    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1072    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
1073    set_namelist namelist_cfg ln_diaobs .true.
1074    set_namelist namelist_cfg ln_t3d .true.
1075    set_namelist namelist_cfg ln_s3d .true.
1076    set_namelist namelist_cfg ln_sst .true.
1077    set_namelist namelist_cfg ln_sla .true.
1078    set_namelist namelist_cfg ln_sic .true.
1079    set_namelist namelist_cfg ln_vel3d .true.
1080    set_namelist namelist_cfg ln_bkgwri .true.
1081    set_namelist namelist_cfg ln_trainc .true.
1082    set_namelist namelist_cfg ln_dyninc .true.
1083    set_namelist namelist_cfg ln_sshinc .true.
1084    set_namelist namelist_cfg ln_asmiau .true.
1085    #remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration)
1086    set_namelist namelist_top_cfg ln_trcdta .false.
1087    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
1088    # if not you need input files, and for tests is not necessary
1089    set_namelist namelist_pisces_cfg ln_presatm .false.
1090    set_namelist namelist_pisces_cfg ln_varpar .false.
1091    set_namelist namelist_pisces_cfg ln_dust .false.
1092    set_namelist namelist_pisces_cfg ln_solub .false.
1093    set_namelist namelist_pisces_cfg ln_river .false.
1094    set_namelist namelist_pisces_cfg ln_ndepo .false.
1095    set_namelist namelist_pisces_cfg ln_ironsed .false.
1096    set_namelist namelist_pisces_cfg ln_ironice .false.
1097    set_namelist namelist_pisces_cfg ln_hydrofe .false.
1098    if [ ${USING_MPMD} == "yes" ] ; then
1099       set_xio_using_server iodef.xml true
1100    else
1101       set_xio_using_server iodef.xml false
1102    fi
1103    cd ${SETTE_DIR}
1104    . ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1105    cd ${SETTE_DIR}
1106    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1107fi
1108
1109# ------------
1110# AGRIF ICE
1111# -----------
1112if [ ${config} == "AGRIF" ] ;  then
1113## Restartability tests
1114    export TEST_NAME="LONG"
1115    cd ${MAIN_DIR}
1116    . ./makenemo -m ${CMP_NAM} -n AGRIF_DEMO_ST -r AGRIF_DEMO -j 8 add_key ${ADD_KEYS} del_key ${DEL_KEYS}
1117    cd ${SETTE_DIR}
1118    . ./param.cfg
1119    . ./all_functions.sh
1120    . ./prepare_exe_dir.sh
1121    set_valid_dir
1122    clean_valid_dir
1123    JOB_FILE=${EXE_DIR}/run_job.sh
1124    NPROC=16
1125    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1126    cd ${EXE_DIR}
1127    set_namelist namelist_cfg cn_exp \"AGRIF_LONG\"
1128    set_namelist namelist_cfg nn_it000 1
1129    set_namelist namelist_cfg nn_itend 20
1130    set_namelist namelist_cfg nn_stock 10
1131    set_namelist namelist_cfg ln_ctl .false.
1132    set_namelist namelist_cfg sn_cfctl%l_config .true.
1133    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1134    set_namelist 1_namelist_cfg cn_exp \"AGRIF_LONG\"
1135    set_namelist 1_namelist_cfg nn_it000 1
1136    set_namelist 1_namelist_cfg nn_itend 20
1137    set_namelist 1_namelist_cfg nn_stock 10
1138    set_namelist 1_namelist_cfg ln_ctl .false.
1139    set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
1140    set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
1141    set_namelist 2_namelist_cfg cn_exp \"AGRIF_LONG\"
1142    set_namelist 2_namelist_cfg nn_it000 1
1143    set_namelist 2_namelist_cfg nn_itend 80
1144    set_namelist 2_namelist_cfg nn_stock 40
1145    set_namelist 2_namelist_cfg ln_ctl .false.
1146    set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
1147    set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
1148    set_namelist 3_namelist_cfg cn_exp \"AGRIF_LONG\"
1149    set_namelist 3_namelist_cfg nn_it000 1
1150    set_namelist 3_namelist_cfg nn_itend 240
1151    set_namelist 3_namelist_cfg nn_stock 120
1152    set_namelist 3_namelist_cfg ln_ctl .false.
1153    set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
1154    set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
1155
1156    if [ ${USING_MPMD} == "yes" ] ; then
1157       set_xio_using_server iodef.xml true
1158    else
1159       set_xio_using_server iodef.xml false
1160    fi
1161    cd ${SETTE_DIR}
1162    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1163   
1164    cd ${SETTE_DIR}
1165    export TEST_NAME="SHORT"
1166    . ./prepare_exe_dir.sh
1167    set_valid_dir
1168    clean_valid_dir
1169    cd ${EXE_DIR}
1170    set_namelist namelist_cfg cn_exp \"AGRIF_SHORT\"
1171    set_namelist namelist_cfg nn_it000 11
1172    set_namelist namelist_cfg nn_itend 20
1173    set_namelist namelist_cfg nn_stock 10
1174    set_namelist namelist_cfg ln_ctl .false.
1175    set_namelist namelist_cfg sn_cfctl%l_config .true.
1176    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1177    set_namelist namelist_cfg ln_rstart .true.
1178    set_namelist namelist_cfg nn_rstctl 2
1179    set_namelist 1_namelist_cfg cn_exp \"AGRIF_SHORT\"
1180    set_namelist 1_namelist_cfg nn_it000 11
1181    set_namelist 1_namelist_cfg nn_itend 20
1182    set_namelist 1_namelist_cfg nn_stock 10
1183    set_namelist 1_namelist_cfg ln_ctl .false.
1184    set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
1185    set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
1186    set_namelist 1_namelist_cfg ln_rstart .true.
1187    set_namelist 1_namelist_cfg nn_rstctl 2
1188    set_namelist 2_namelist_cfg cn_exp \"AGRIF_SHORT\"
1189    set_namelist 2_namelist_cfg nn_it000 41
1190    set_namelist 2_namelist_cfg nn_itend 80
1191    set_namelist 2_namelist_cfg nn_stock 40
1192    set_namelist 2_namelist_cfg ln_ctl .false.
1193    set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
1194    set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
1195    set_namelist 2_namelist_cfg ln_rstart .true.
1196    set_namelist 2_namelist_cfg nn_rstctl 2
1197    set_namelist 3_namelist_cfg cn_exp \"AGRIF_SHORT\"
1198    set_namelist 3_namelist_cfg nn_it000 121
1199    set_namelist 3_namelist_cfg nn_itend 240
1200    set_namelist 3_namelist_cfg nn_stock 120
1201    set_namelist 3_namelist_cfg ln_ctl .false.
1202    set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
1203    set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
1204    set_namelist 3_namelist_cfg ln_rstart .true.
1205    set_namelist 3_namelist_cfg nn_rstctl 2
1206    set_namelist namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000010_restart\"
1207    set_namelist namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000010_restart_ice\"
1208    set_namelist 1_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000010_restart\"
1209    set_namelist 1_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000010_restart_ice\"
1210    set_namelist 2_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000040_restart\"
1211    set_namelist 2_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000040_restart_ice\"
1212    set_namelist 3_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000120_restart\"
1213    set_namelist 3_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000120_restart_ice\"
1214
1215    for (( i=1; i<=$NPROC; i++)) ; do
1216        L_NPROC=$(( $i - 1 ))
1217        L_NPROC=`printf "%04d\n" ${L_NPROC}`
1218        ln -sf ../LONG/AGRIF_LONG_00000010_restart_${L_NPROC}.nc .
1219        ln -sf ../LONG/AGRIF_LONG_00000010_restart_ice_${L_NPROC}.nc .
1220        ln -sf ../LONG/1_AGRIF_LONG_00000010_restart_${L_NPROC}.nc .
1221        ln -sf ../LONG/1_AGRIF_LONG_00000010_restart_ice_${L_NPROC}.nc .
1222        ln -sf ../LONG/2_AGRIF_LONG_00000040_restart_${L_NPROC}.nc .
1223        ln -sf ../LONG/2_AGRIF_LONG_00000040_restart_ice_${L_NPROC}.nc .
1224        ln -sf ../LONG/3_AGRIF_LONG_00000120_restart_${L_NPROC}.nc .
1225        ln -sf ../LONG/3_AGRIF_LONG_00000120_restart_ice_${L_NPROC}.nc .
1226    done
1227    if [ ${USING_MPMD} == "yes" ] ; then
1228       set_xio_using_server iodef.xml true
1229    else
1230       set_xio_using_server iodef.xml false
1231    fi
1232    cd ${SETTE_DIR}
1233    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1234    cd ${SETTE_DIR}
1235    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1236
1237## Reproducibility tests
1238    export TEST_NAME="REPRO_4_8"
1239    cd ${MAIN_DIR}
1240    cd ${SETTE_DIR}
1241    . ./param.cfg
1242    . ./all_functions.sh
1243    . ./prepare_exe_dir.sh
1244    set_valid_dir
1245    clean_valid_dir
1246    JOB_FILE=${EXE_DIR}/run_job.sh
1247    NPROC=32
1248    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1249    cd ${EXE_DIR}
1250    set_namelist namelist_cfg cn_exp \"AGRIF_48\"
1251    set_namelist namelist_cfg nn_it000 1
1252    set_namelist namelist_cfg nn_itend 20
1253    set_namelist namelist_cfg jpni 4
1254    set_namelist namelist_cfg jpnj 8
1255    set_namelist namelist_cfg ln_ctl .false.
1256    set_namelist namelist_cfg sn_cfctl%l_config .true.
1257    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1258    set_namelist 1_namelist_cfg cn_exp \"AGRIF_48\"
1259    set_namelist 1_namelist_cfg nn_it000 1
1260    set_namelist 1_namelist_cfg nn_itend 20
1261    set_namelist 1_namelist_cfg jpni 4
1262    set_namelist 1_namelist_cfg jpnj 8
1263    set_namelist 1_namelist_cfg ln_ctl .false.
1264    set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
1265    set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
1266    set_namelist 2_namelist_cfg cn_exp \"AGRIF_48\"
1267    set_namelist 2_namelist_cfg nn_it000 1
1268    set_namelist 2_namelist_cfg nn_itend 80
1269    set_namelist 2_namelist_cfg jpni 4
1270    set_namelist 2_namelist_cfg jpnj 8
1271    set_namelist 2_namelist_cfg ln_ctl .false.
1272    set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
1273    set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
1274    set_namelist 3_namelist_cfg cn_exp \"AGRIF_48\"
1275    set_namelist 3_namelist_cfg nn_it000 1
1276    set_namelist 3_namelist_cfg nn_itend 240
1277    set_namelist 3_namelist_cfg jpni 4
1278    set_namelist 3_namelist_cfg jpnj 8
1279    set_namelist 3_namelist_cfg ln_ctl .false.
1280    set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
1281    set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
1282
1283    if [ ${USING_MPMD} == "yes" ] ; then
1284       set_xio_using_server iodef.xml true
1285    else
1286       set_xio_using_server iodef.xml false
1287    fi
1288    cd ${SETTE_DIR}
1289    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1290    cd ${SETTE_DIR}
1291    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1292
1293    cd ${SETTE_DIR}
1294    export TEST_NAME="REPRO_8_4"
1295    . ./prepare_exe_dir.sh
1296    set_valid_dir
1297    clean_valid_dir
1298    JOB_FILE=${EXE_DIR}/run_job.sh
1299    NPROC=32
1300    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1301    cd ${EXE_DIR}
1302    set_namelist namelist_cfg cn_exp \"AGRIF_84\"
1303    set_namelist namelist_cfg nn_it000 1
1304    set_namelist namelist_cfg nn_itend 20
1305    set_namelist namelist_cfg jpni 8
1306    set_namelist namelist_cfg jpnj 4
1307    set_namelist namelist_cfg ln_ctl .false.
1308    set_namelist namelist_cfg sn_cfctl%l_config .true.
1309    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1310    set_namelist 1_namelist_cfg cn_exp \"AGRIF_84\"
1311    set_namelist 1_namelist_cfg nn_it000 1
1312    set_namelist 1_namelist_cfg nn_itend 20
1313    set_namelist 1_namelist_cfg jpni 8
1314    set_namelist 1_namelist_cfg jpnj 4
1315    set_namelist 1_namelist_cfg ln_ctl .false.
1316    set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
1317    set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
1318    set_namelist 2_namelist_cfg cn_exp \"AGRIF_84\"
1319    set_namelist 2_namelist_cfg nn_it000 1
1320    set_namelist 2_namelist_cfg nn_itend 80
1321    set_namelist 2_namelist_cfg jpni 8
1322    set_namelist 2_namelist_cfg jpnj 4
1323    set_namelist 2_namelist_cfg ln_ctl .false.
1324    set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
1325    set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
1326    set_namelist 3_namelist_cfg cn_exp \"AGRIF_84\"
1327    set_namelist 3_namelist_cfg nn_it000 1
1328    set_namelist 3_namelist_cfg nn_itend 240
1329    set_namelist 3_namelist_cfg jpni 8
1330    set_namelist 3_namelist_cfg jpnj 4
1331    set_namelist 3_namelist_cfg ln_ctl .false.
1332    set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
1333    set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
1334
1335    if [ ${USING_MPMD} == "yes" ] ; then
1336       set_xio_using_server iodef.xml true
1337    else
1338       set_xio_using_server iodef.xml false
1339    fi
1340    cd ${SETTE_DIR}
1341    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1342    cd ${SETTE_DIR}
1343    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1344
1345## test code corruption with AGRIF (phase 1) ==> Compile with key_agrif but run with no zoom
1346    export TEST_NAME="ORCA2"
1347    cd ${MAIN_DIR}
1348    cd ${SETTE_DIR}
1349    . ./param.cfg
1350    . ./all_functions.sh
1351    . ./prepare_exe_dir.sh
1352    set_valid_dir
1353    clean_valid_dir
1354    JOB_FILE=${EXE_DIR}/run_job.sh
1355    NPROC=32
1356    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1357    cd ${EXE_DIR}
1358    set_namelist namelist_cfg cn_exp \"ORCA2\"
1359    set_namelist namelist_cfg nn_it000 1
1360    set_namelist namelist_cfg nn_itend 150
1361    set_namelist namelist_cfg ln_ctl .false.
1362    set_namelist namelist_cfg sn_cfctl%l_config .true.
1363    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1364
1365#   Set the number of fine grids to zero:   
1366    sed -i "1s/.*/0/" ${EXE_DIR}/AGRIF_FixedGrids.in
1367
1368    if [ ${USING_MPMD} == "yes" ] ; then
1369       set_xio_using_server iodef.xml true
1370    else
1371       set_xio_using_server iodef.xml false
1372    fi
1373    cd ${SETTE_DIR}
1374    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1375    cd ${SETTE_DIR}
1376    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1377
1378fi
1379
1380
1381## test code corruption with AGRIF (phase 2) ==> Compile without key_agrif (to be compared with AGRIF_DEMO_ST/ORCA2)
1382if [ ${config} == "AGRIF" ] ;  then
1383    export TEST_NAME="ORCA2"
1384    cd ${MAIN_DIR}
1385    . ./makenemo -m ${CMP_NAM} -n AGRIF_DEMO_NOAGRIF_ST -r AGRIF_DEMO -j 8 add_key ${ADD_KEYS} del_key "key_agrif"
1386    cd ${SETTE_DIR}
1387    . ./param.cfg
1388    . ./all_functions.sh
1389    . ./prepare_exe_dir.sh
1390    set_valid_dir
1391    clean_valid_dir
1392    JOB_FILE=${EXE_DIR}/run_job.sh
1393    NPROC=32
1394    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1395    cd ${EXE_DIR}
1396    set_namelist namelist_cfg cn_exp \"ORCA2\"
1397    set_namelist namelist_cfg nn_it000 1
1398    set_namelist namelist_cfg nn_itend 150
1399    set_namelist namelist_cfg ln_ctl .false.
1400    set_namelist namelist_cfg sn_cfctl%l_config .true.
1401    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1402#
1403    if [ ${USING_MPMD} == "yes" ] ; then
1404       set_xio_using_server iodef.xml true
1405    else
1406       set_xio_using_server iodef.xml false
1407    fi
1408    cd ${SETTE_DIR}
1409    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1410    cd ${SETTE_DIR}
1411    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1412
1413fi
1414
1415# -------
1416# SPITZ12
1417# -------
1418if [ ${config} == "SPITZ12" ] ;  then
1419## Restartability tests
1420    export TEST_NAME="LONG"
1421    cd ${MAIN_DIR}
1422    . ./makenemo -m ${CMP_NAM} -n SPITZ12_ST -r SPITZ12 -j 8 add_key ${ADD_KEYS} del_key ${DEL_KEYS}
1423    cd ${SETTE_DIR}
1424    . ./param.cfg
1425    . ./all_functions.sh
1426    . ./prepare_exe_dir.sh
1427    set_valid_dir
1428    clean_valid_dir
1429    JOB_FILE=${EXE_DIR}/run_job.sh
1430    NPROC=32
1431    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1432    cd ${EXE_DIR}
1433    set_namelist namelist_cfg cn_exp \"S12_LONG\"
1434    set_namelist namelist_cfg nn_it000 1
1435    set_namelist namelist_cfg nn_itend 240
1436    set_namelist namelist_cfg nn_stock 120
1437    set_namelist namelist_cfg nn_date0 20020101
1438    set_namelist namelist_cfg jpni 4
1439    set_namelist namelist_cfg jpnj 8
1440    set_namelist namelist_cfg ln_ctl .false.
1441    set_namelist namelist_cfg sn_cfctl%l_config .true.
1442    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1443    #set_namelist namelist_ice_cfg ln_icediachk .true.
1444    if [ ${USING_MPMD} == "yes" ] ; then
1445       set_xio_using_server iodef.xml true
1446    else
1447       set_xio_using_server iodef.xml false
1448    fi
1449    cd ${SETTE_DIR}
1450    . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1451   
1452    cd ${SETTE_DIR}
1453    export TEST_NAME="SHORT"
1454    . ./prepare_exe_dir.sh
1455    set_valid_dir
1456    clean_valid_dir
1457    cd ${EXE_DIR}
1458    set_namelist namelist_cfg cn_exp \"S12_SHORT\"
1459    set_namelist namelist_cfg nn_it000 121
1460    set_namelist namelist_cfg nn_itend 240
1461    set_namelist namelist_cfg nn_stock 120
1462    set_namelist namelist_cfg ln_rstart .true.
1463    set_namelist namelist_cfg nn_rstctl 2
1464    set_namelist namelist_cfg jpni 4
1465    set_namelist namelist_cfg jpnj 8
1466    set_namelist namelist_cfg ln_ctl .false.
1467    set_namelist namelist_cfg sn_cfctl%l_config .true.
1468    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1469    set_namelist namelist_cfg cn_ocerst_in \"S12_LONG_00000120_restart\"
1470    set_namelist namelist_ice_cfg cn_icerst_in \"S12_LONG_00000120_restart_ice\"
1471    for (( i=1; i<=$NPROC; i++)) ; do
1472        L_NPROC=$(( $i - 1 ))
1473        L_NPROC=`printf "%04d\n" ${L_NPROC}`
1474        ln -sf ../LONG/S12_LONG_00000120_restart_${L_NPROC}.nc .
1475        ln -sf ../LONG/S12_LONG_00000120_restart_ice_${L_NPROC}.nc .
1476    done
1477    if [ ${USING_MPMD} == "yes" ] ; then
1478       set_xio_using_server iodef.xml true
1479    else
1480       set_xio_using_server iodef.xml false
1481    fi
1482    cd ${SETTE_DIR}
1483    . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1484    cd ${SETTE_DIR}
1485    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1486
1487## Reproducibility tests
1488    export TEST_NAME="REPRO_4_8"
1489    cd ${MAIN_DIR}
1490    cd ${SETTE_DIR}
1491    . ./param.cfg
1492    . ./all_functions.sh
1493    . ./prepare_exe_dir.sh
1494    set_valid_dir
1495    clean_valid_dir
1496    JOB_FILE=${EXE_DIR}/run_job.sh
1497    NPROC=32
1498    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1499    cd ${EXE_DIR}
1500    set_namelist namelist_cfg cn_exp \"S12_48\"
1501    set_namelist namelist_cfg nn_it000 1
1502    set_namelist namelist_cfg nn_itend 120
1503    set_namelist namelist_cfg nn_date0 20020101
1504    set_namelist namelist_cfg jpni 4
1505    set_namelist namelist_cfg jpnj 8
1506    set_namelist namelist_cfg ln_ctl .false.
1507    set_namelist namelist_cfg sn_cfctl%l_config .true.
1508    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1509    if [ ${USING_MPMD} == "yes" ] ; then
1510       set_xio_using_server iodef.xml true
1511    else
1512       set_xio_using_server iodef.xml false
1513    fi
1514    cd ${SETTE_DIR}
1515    . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1516    cd ${SETTE_DIR}
1517    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1518
1519    cd ${SETTE_DIR}
1520    export TEST_NAME="REPRO_8_4"
1521    . ./prepare_exe_dir.sh
1522    set_valid_dir
1523    clean_valid_dir
1524    JOB_FILE=${EXE_DIR}/run_job.sh
1525    NPROC=32
1526    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1527    cd ${EXE_DIR}
1528    set_namelist namelist_cfg cn_exp \"S12_84\"
1529    set_namelist namelist_cfg nn_it000 1
1530    set_namelist namelist_cfg nn_itend 120
1531    set_namelist namelist_cfg nn_date0 20020101
1532    set_namelist namelist_cfg jpni 8
1533    set_namelist namelist_cfg jpnj 4
1534    set_namelist namelist_cfg ln_ctl .false.
1535    set_namelist namelist_cfg sn_cfctl%l_config .true.
1536    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1537    if [ ${USING_MPMD} == "yes" ] ; then
1538       set_xio_using_server iodef.xml true
1539    else
1540       set_xio_using_server iodef.xml false
1541    fi
1542    cd ${SETTE_DIR}
1543    . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
1544    cd ${SETTE_DIR}
1545    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1546fi
1547
1548
1549done
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