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p4zsink.F90 in NEMO/branches/2020/dev_r12563_ASINTER-06_ABL_improvement/src/TOP/PISCES/P4Z – NEMO

source: NEMO/branches/2020/dev_r12563_ASINTER-06_ABL_improvement/src/TOP/PISCES/P4Z/p4zsink.F90 @ 13891

Last change on this file since 13891 was 12377, checked in by acc, 4 years ago

The big one. Merging all 2019 developments from the option 1 branch back onto the trunk.

This changeset reproduces 2019/dev_r11943_MERGE_2019 on the trunk using a 2-URL merge
onto a working copy of the trunk. I.e.:

svn merge --ignore-ancestry \

​svn+ssh://acc@forge.ipsl.jussieu.fr/ipsl/forge/projets/nemo/svn/NEMO/trunk \
​svn+ssh://acc@forge.ipsl.jussieu.fr/ipsl/forge/projets/nemo/svn/NEMO/branches/2019/dev_r11943_MERGE_2019 ./

The --ignore-ancestry flag avoids problems that may otherwise arise from the fact that
the merge history been trunk and branch may have been applied in a different order but
care has been taken before this step to ensure that all applicable fixes and updates
are present in the merge branch.

The trunk state just before this step has been branched to releases/release-4.0-HEAD
and that branch has been immediately tagged as releases/release-4.0.2. Any fixes
or additions in response to tickets on 4.0, 4.0.1 or 4.0.2 should be done on
releases/release-4.0-HEAD. From now on future 'point' releases (e.g. 4.0.2) will
remain unchanged with periodic releases as needs demand. Note release-4.0-HEAD is a
transitional naming convention. Future full releases, say 4.2, will have a release-4.2
branch which fulfills this role and the first point release (e.g. 4.2.0) will be made
immediately following the release branch creation.

2020 developments can be started from any trunk revision later than this one.
  • Property svn:keywords set to Id
File size: 9.4 KB
Line 
1MODULE p4zsink
2   !!======================================================================
3   !!                         ***  MODULE p4zsink  ***
4   !! TOP :  PISCES  vertical flux of particulate matter due to gravitational sinking
5   !!======================================================================
6   !! History :   1.0  !  2004     (O. Aumont) Original code
7   !!             2.0  !  2007-12  (C. Ethe, G. Madec)  F90
8   !!             3.4  !  2011-06  (O. Aumont, C. Ethe) Change aggregation formula
9   !!             3.5  !  2012-07  (O. Aumont) Introduce potential time-splitting
10   !!----------------------------------------------------------------------
11   !!   p4z_sink       :  Compute vertical flux of particulate matter due to gravitational sinking
12   !!   p4z_sink_init  :  Unitialisation of sinking speed parameters
13   !!   p4z_sink_alloc :  Allocate sinking speed variables
14   !!----------------------------------------------------------------------
15   USE oce_trc         !  shared variables between ocean and passive tracers
16   USE trc             !  passive tracers common variables
17   USE sms_pisces      !  PISCES Source Minus Sink variables
18   USE trcsink         !  General routine to compute sedimentation
19   USE prtctl_trc      !  print control for debugging
20   USE iom             !  I/O manager
21   USE lib_mpp
22
23   IMPLICIT NONE
24   PRIVATE
25
26   PUBLIC   p4z_sink         ! called in p4zbio.F90
27   PUBLIC   p4z_sink_init    ! called in trcsms_pisces.F90
28   PUBLIC   p4z_sink_alloc
29
30   REAL(wp), PUBLIC, ALLOCATABLE, SAVE, DIMENSION(:,:,:) ::   sinking, sinking2  !: POC sinking fluxes
31   !                                                          !  (different meanings depending on the parameterization)
32   REAL(wp), PUBLIC, ALLOCATABLE, SAVE, DIMENSION(:,:,:) ::   sinkingn, sinking2n  !: POC sinking fluxes
33   REAL(wp), PUBLIC, ALLOCATABLE, SAVE, DIMENSION(:,:,:) ::   sinkingp, sinking2p  !: POC sinking fluxes
34   REAL(wp), PUBLIC, ALLOCATABLE, SAVE, DIMENSION(:,:,:) ::   sinkcal, sinksil   !: CaCO3 and BSi sinking fluxes
35   REAL(wp), PUBLIC, ALLOCATABLE, SAVE, DIMENSION(:,:,:) ::   sinkfer            !: Small BFe sinking fluxes
36   REAL(wp), PUBLIC, ALLOCATABLE, SAVE, DIMENSION(:,:,:) ::   sinkfer2           !: Big iron sinking fluxes
37
38   INTEGER  :: ik100
39
40   !! * Substitutions
41#  include "do_loop_substitute.h90"
42   !!----------------------------------------------------------------------
43   !! NEMO/TOP 4.0 , NEMO Consortium (2018)
44   !! $Id$
45   !! Software governed by the CeCILL license (see ./LICENSE)
46   !!----------------------------------------------------------------------
47CONTAINS
48
49   !!----------------------------------------------------------------------
50   !!   'standard sinking parameterisation'                  ???
51   !!----------------------------------------------------------------------
52
53   SUBROUTINE p4z_sink ( kt, knt, Kbb, Kmm, Krhs )
54      !!---------------------------------------------------------------------
55      !!                     ***  ROUTINE p4z_sink  ***
56      !!
57      !! ** Purpose :   Compute vertical flux of particulate matter due to
58      !!                gravitational sinking
59      !!
60      !! ** Method  : - ???
61      !!---------------------------------------------------------------------
62      INTEGER, INTENT(in) :: kt, knt
63      INTEGER, INTENT(in) :: Kbb, Kmm, Krhs  ! time level indices
64      INTEGER  ::   ji, jj, jk
65      CHARACTER (len=25) :: charout
66      REAL(wp) :: zmax, zfact
67      !!---------------------------------------------------------------------
68      !
69      IF( ln_timing )   CALL timing_start('p4z_sink')
70
71      ! Initialization of some global variables
72      ! ---------------------------------------
73      prodpoc(:,:,:) = 0.
74      conspoc(:,:,:) = 0.
75      prodgoc(:,:,:) = 0.
76      consgoc(:,:,:) = 0.
77
78      !
79      !    Sinking speeds of detritus is increased with depth as shown
80      !    by data and from the coagulation theory
81      !    -----------------------------------------------------------
82      DO_3D_11_11( 1, jpkm1 )
83         zmax  = MAX( heup_01(ji,jj), hmld(ji,jj) )
84         zfact = MAX( 0., gdepw(ji,jj,jk+1,Kmm) - zmax ) / wsbio2scale
85         wsbio4(ji,jj,jk) = wsbio2 + MAX(0., ( wsbio2max - wsbio2 )) * zfact
86      END_3D
87
88      ! limit the values of the sinking speeds to avoid numerical instabilities 
89      wsbio3(:,:,:) = wsbio
90
91      !
92      !  Initializa to zero all the sinking arrays
93      !   -----------------------------------------
94      sinking (:,:,:) = 0.e0
95      sinking2(:,:,:) = 0.e0
96      sinkcal (:,:,:) = 0.e0
97      sinkfer (:,:,:) = 0.e0
98      sinksil (:,:,:) = 0.e0
99      sinkfer2(:,:,:) = 0.e0
100
101      !   Compute the sedimentation term using p4zsink2 for all the sinking particles
102      !   -----------------------------------------------------
103      CALL trc_sink( kt, Kbb, Kmm, wsbio3, sinking , jppoc, rfact2 )
104      CALL trc_sink( kt, Kbb, Kmm, wsbio3, sinkfer , jpsfe, rfact2 )
105      CALL trc_sink( kt, Kbb, Kmm, wsbio4, sinking2, jpgoc, rfact2 )
106      CALL trc_sink( kt, Kbb, Kmm, wsbio4, sinkfer2, jpbfe, rfact2 )
107      CALL trc_sink( kt, Kbb, Kmm, wsbio4, sinksil , jpgsi, rfact2 )
108      CALL trc_sink( kt, Kbb, Kmm, wsbio4, sinkcal , jpcal, rfact2 )
109
110      IF( ln_p5z ) THEN
111         sinkingn (:,:,:) = 0.e0
112         sinking2n(:,:,:) = 0.e0
113         sinkingp (:,:,:) = 0.e0
114         sinking2p(:,:,:) = 0.e0
115
116         !   Compute the sedimentation term using p4zsink2 for all the sinking particles
117         !   -----------------------------------------------------
118         CALL trc_sink( kt, Kbb, Kmm, wsbio3, sinkingn , jppon, rfact2 )
119         CALL trc_sink( kt, Kbb, Kmm, wsbio3, sinkingp , jppop, rfact2 )
120         CALL trc_sink( kt, Kbb, Kmm, wsbio4, sinking2n, jpgon, rfact2 )
121         CALL trc_sink( kt, Kbb, Kmm, wsbio4, sinking2p, jpgop, rfact2 )
122      ENDIF
123
124     ! Total carbon export per year
125     IF( iom_use( "tcexp" ) .OR. ( ln_check_mass .AND. kt == nitend .AND. knt == nrdttrc )  )  &
126        &   t_oce_co2_exp = glob_sum( 'p4zsink', ( sinking(:,:,ik100) + sinking2(:,:,ik100) ) * e1e2t(:,:) * tmask(:,:,1) )
127     !
128     IF( lk_iomput .AND.  knt == nrdttrc ) THEN
129       zfact = 1.e+3 * rfact2r  !  conversion from mol/l/kt to  mol/m3/s
130       !
131       CALL iom_put( "EPC100"  , ( sinking(:,:,ik100) + sinking2(:,:,ik100) ) * zfact * tmask(:,:,1) ) ! Export of carbon at 100m
132       CALL iom_put( "EPFE100" , ( sinkfer(:,:,ik100) + sinkfer2(:,:,ik100) ) * zfact * tmask(:,:,1) ) ! Export of iron at 100m
133       CALL iom_put( "EPCAL100", sinkcal(:,:,ik100) * zfact * tmask(:,:,1) )      ! Export of calcite at 100m
134       CALL iom_put( "EPSI100" , sinksil(:,:,ik100) * zfact * tmask(:,:,1) )          ! Export of bigenic silica at 100m
135       CALL iom_put( "EXPC"    , ( sinking(:,:,:) + sinking2(:,:,:) ) * zfact * tmask(:,:,:) ) ! Export of carbon in the water column
136       CALL iom_put( "EXPFE"   , ( sinkfer(:,:,:) + sinkfer2(:,:,:) ) * zfact * tmask(:,:,:) ) ! Export of iron 
137       CALL iom_put( "EXPCAL"  , sinkcal(:,:,:) * zfact * tmask(:,:,:) )      ! Export of calcite
138       CALL iom_put( "EXPSI"   , sinksil(:,:,:) * zfact * tmask(:,:,:) )      ! Export of bigenic silica
139       CALL iom_put( "tcexp"   , t_oce_co2_exp * zfact )   ! molC/s
140       !
141      ENDIF
142      !
143      IF(sn_cfctl%l_prttrc)   THEN  ! print mean trends (used for debugging)
144         WRITE(charout, FMT="('sink')")
145         CALL prt_ctl_trc_info(charout)
146         CALL prt_ctl_trc(tab4d=tr(:,:,:,:,Krhs), mask=tmask, clinfo=ctrcnm)
147      ENDIF
148      !
149      IF( ln_timing )   CALL timing_stop('p4z_sink')
150      !
151   END SUBROUTINE p4z_sink
152
153
154   SUBROUTINE p4z_sink_init
155      !!----------------------------------------------------------------------
156      !!                  ***  ROUTINE p4z_sink_init  ***
157      !!----------------------------------------------------------------------
158      INTEGER :: jk
159      !!----------------------------------------------------------------------
160      !
161      ik100 = 10        !  last level where depth less than 100 m
162      DO jk = jpkm1, 1, -1
163         IF( gdept_1d(jk) > 100. )  ik100 = jk - 1
164      END DO
165      IF (lwp) WRITE(numout,*)
166      IF (lwp) WRITE(numout,*) ' Level corresponding to 100m depth ',  ik100 + 1
167      IF (lwp) WRITE(numout,*)
168      !
169      t_oce_co2_exp = 0._wp
170      !
171   END SUBROUTINE p4z_sink_init
172
173   INTEGER FUNCTION p4z_sink_alloc()
174      !!----------------------------------------------------------------------
175      !!                     ***  ROUTINE p4z_sink_alloc  ***
176      !!----------------------------------------------------------------------
177      INTEGER :: ierr(2)
178      !!----------------------------------------------------------------------
179      !
180      ierr(:) = 0
181      !
182      ALLOCATE( sinking(jpi,jpj,jpk) , sinking2(jpi,jpj,jpk)                    ,     &               
183         &      sinkcal(jpi,jpj,jpk) , sinksil (jpi,jpj,jpk)                    ,     &               
184         &      sinkfer2(jpi,jpj,jpk)                                           ,     &               
185         &      sinkfer(jpi,jpj,jpk)                                            , STAT=ierr(1) )               
186         !
187      IF( ln_p5z    ) ALLOCATE( sinkingn(jpi,jpj,jpk), sinking2n(jpi,jpj,jpk)   ,     &
188         &                      sinkingp(jpi,jpj,jpk), sinking2p(jpi,jpj,jpk)   , STAT=ierr(2) )
189      !
190      p4z_sink_alloc = MAXVAL( ierr )
191      IF( p4z_sink_alloc /= 0 ) CALL ctl_stop( 'STOP', 'p4z_sink_alloc : failed to allocate arrays.' )
192      !
193   END FUNCTION p4z_sink_alloc
194   
195   !!======================================================================
196END MODULE p4zsink
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