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NEMO_manual.bib in NEMO/trunk/doc/latex/NEMO/main – NEMO

source: NEMO/trunk/doc/latex/NEMO/main/NEMO_manual.bib @ 10530

Last change on this file since 10530 was 10530, checked in by mathiot, 5 years ago

update BDY doc with contribution from Enda, Dave and James. fix ticket #2205

File size: 121.2 KB
Line 
1@STRING{AP = {Academic Press}}
2
3@STRING{AREPS = {Annual Review of Earth Planetary Science}}
4
5@STRING{ARFM = {Annual Review of Fluid Mechanics}}
6
7@STRING{ASL = {Atmospheric Science Letters}}
8
9@STRING{AW = {Addison-Wesley}}
10
11@STRING{CP = {Clarendon Press}}
12
13@STRING{CD = {Clim. Dyn.}}
14
15@STRING{CUP = {Cambridge University Press}}
16
17@STRING{CSR = {Cont. Shelf Res.}}
18
19@STRING{D = {Dover Publications}}
20
21@STRING{DAO = {Dyn. Atmos. Ocean}}
22
23@STRING{DSR = {Deep-Sea Res.}}
24
25@STRING{E = {Eyrolles}}
26
27@STRING{EFM ={Environ. Fluid Mech.}}
28
29@STRING{GRL = {Geophys. Res. Let.}}
30
31@STRING{I = {Interscience}}
32
33@STRING{JAOT = {J. Atmos. Ocean Tech.}}
34
35@STRING{JAS = {J. Atmos. Sc.}}
36
37@STRING{JC = {J. Climate}}
38
39@STRING{JCP = {J. Comput. Phys.}}
40
41@STRING{JFM = {J. Fluid Mech.}}
42
43@STRING{JGR = {J. Geophys. Res}}
44
45@STRING{JHUP = {The Johns Hopkins University Press}}
46
47@STRING{JMR = {J. Mar. Res.}}
48
49@STRING{JMS = {J. Mar. Sys.}}
50
51@STRING{JMSJ = {J. Met. Soc. Japan}}
52
53@STRING{JPO = {J. Phys. Oceanogr.}}
54
55@STRING{JSC = {J. Supercomputing.}}
56
57@STRING{JWS = {John Wiley and Sons}}
58
59@STRING{M = {Macmillan}}
60
61@STRING{MGH = {McGraw-Hill}}
62
63@STRING{MWR = {Mon. Wea. Rev.}}
64
65@STRING{Nature = {Nat.}}
66
67@STRING{NH = {North-Holland}}
68
69@STRING{Ocean = {Oceanology}}
70
71@STRING{OD = {Ocean Dyn.}}
72
73@STRING{OM = {Ocean Modelling}}
74
75@STRING{OS = {Ocean Sc.}}
76
77@STRING{OUP = {Oxford University Press}}
78
79@STRING{PH = {Prentice-Hall}}
80
81@STRING{PO = {Prog. Oceangr.}}
82
83@STRING{PP = {Pergamon Press}}
84
85@STRING{PRSL = {Proceedings of the Royal Society of London}}
86
87@STRING{QJRMS = {Quart. J. Roy. Meteor. Soc.}}
88
89@STRING{Recherche = {La Recherche}}
90
91@STRING{RGSP = {Rev. Geophys. Space Phys.}}
92
93@STRING{Science = {Science}}
94
95@STRING{SV = {Springer-Verlag}}
96
97@STRING{Tellus = {Tellus}}
98
99%% No dash for repeated names
100@IEEEtranBSTCTL{IEEEexample:BSTcontrol,
101  CTLdash_repeated_names = "no"
102}
103
104@ARTICLE{Adcroft_Campin_OM04,
105  author =       {A. Adcroft and J.-M. Campin},
106  title =        {Re-scaled height coordinates for accurate
107                  representation of free-surface flows in ocean
108                  circulation models},
109  journal =      OM,
110  year =         2004,
111  volume =       7,
112  pages =        {269--284},
113  doi =          {10.1016/j.ocemod.2003.09.003},
114}
115
116@ARTICLE{Arakawa1966,
117  author =       {A. Arakawa},
118  title =        {Computational design for long term numerical
119                  integration of the equations of fluid motion,
120                  two-dimensional incompressible flow, Part. I.},
121  journal =      JCP,
122  year =         1966,
123  volume =       {I},
124  pages =        {119--149}
125}
126
127@ARTICLE{Arakawa_Hsu_MWR90,
128  author =       {A. Arakawa and Y.-J. G. Hsu},
129  title =        {Energy Conserving and Potential-Enstrophy
130                  Dissipating Schemes for the Shallow Water Equations},
131  journal =      MWR,
132  year =         1990,
133  volume =       118,
134  number =       10,
135  pages =        {1960--1969},
136}
137
138@ARTICLE{Arakawa_Lamb_MWR81,
139  author =       {Arakawa, Akio and Lamb, Vivian R.},
140  title =        {A Potential Enstrophy and Energy Conserving Scheme
141                  for the Shallow Water Equations},
142  journal =      MWR,
143  year =         1981,
144  volume =       109,
145  number =       1,
146  pages =        {18--36}
147}
148
149@ARTICLE{Arbic2004,
150  author =       {B. Arbic and S. Garner and R. Hallberg and
151                  H. Simmons},
152  title =        {The accuracy of surface elevations in forward global
153                  barotropic and baroclinic tide models},
154  journal =      DSR,
155  year =         2004,
156  volume =       51,
157  pages =        {3069-3101}
158}
159
160@ARTICLE{Arbic2010,
161  author =       {Arbic, Wallcraft, Metzger},
162  title =        {Concurrent simulation of the eddying general
163                  circulation and tides in a global ocean model},
164  journal =      OM,
165  year =         2010,
166  volume =       32,
167  number =       {3-4},
168  pages =        {175-187}
169}
170
171@ARTICLE{Arhan2006,
172  author =       {M. Arhan and A.M. Treguier and B. Bourles and
173                  S. Michel},
174  title =        {Diagnosing the annual cycle of the Equatorial
175                  Undercurrent in the Atlantic Ocean from a general
176                  circulation model},
177  journal =      JPO,
178  year =         2006,
179  volume =       36,
180  pages =        {1502--1522}
181}
182
183@ARTICLE{Artale_al_JGR02,
184  author =       {V. Artale and D. Iudicone and R. Santoleri and
185                  V. Rupolo and S. Marullo and F. {D'O}rtenzio},
186  title =        {Role of surface fluxes in ocean general circulation
187                  models using satellite sea surface temperature:
188                  Validation of and sensitivity to the forcing
189                  frequency of the Mediterranean thermohaline
190                  circulation},
191  journal =      JGR,
192  year =         2002,
193  volume =       107,
194  pages =        {1978-2012},
195  doi =          {10.1029/2000JC000452},
196}
197
198@ARTICLE{ASSELIN_MWR72,
199  author =       {R. Asselin},
200  title =        {Frequency Filter for Time Integrations},
201  journal =      MWR,
202  year =         1972,
203  volume =       100,
204  number =       6,
205  pages =        {487--490}
206}
207
208@ARTICLE{Atmadipoera_al_DSR09,
209  author =       {A. Atmadipoera and R. Molcard and G. Madec and
210                  S.Wijffels and J.  Sprintall and A. Koch-Larrouy and
211                  I. Jaya and A. Supangat},
212  title =        {Characteristics and Variability of the Indonesian
213                  Throughflow Water at the Outflow Straits},
214  journal =      DSR,
215  year =         2009,
216  volume =       56,
217  number =       11,
218  pages =        {1942--1954},
219  doi =          {10.1016/j.dsr.2009.06.004},
220}
221
222@ARTICLE{Aumont_al_GBC99,
223  author =       {O. Aumont and P. Monfray and J. C. Orr and G. Madec
224                  and E. Maier-Reimer},
225  title =        {Nutrient trapping in the equatorial Pacific: The
226                  ocean circulation solution},
227  journal =      GBC,
228  year =         1999,
229  volume =       13,
230  pages =        {351--369}
231}
232
233@ARTICLE{Aumont_al_CD98,
234  author =       {O. Aumont and J.C. Orr and D. Jamous and P. Monfray
235                  and O. Marti and G. Madec},
236  title =        {A degradation approach to accelerate simulations to
237                  steady state in a 3-D tracer transport model of the
238                  global ocean},
239  journal =      CD,
240  year =         1998,
241  volume =       14,
242  pages =        {101--116}
243}
244
245@ARTICLE{Axell_JGR02,
246  author =       {L. B. Axell},
247  title =        {Wind-driven internal waves and Langmuir circulations
248                  in a numerical ocean model of the southern Baltic
249                  Sea},
250  journal =      JGR,
251  year =         2002,
252  volume =       107,
253  doi =          {10.1029/2001JC000922},
254}
255
256@ARTICLE{Axell_Liungman_EFM01,
257  author =       {L. B. Axell and O. Liungman},
258  title =        {A one-equation turbulence model for geophysical
259                  applications: Comparison with data and the
260                  k-$\epsilon$ model},
261  journal =      EFM,
262  year =         2001,
263  volume =       1,
264  pages =        {71--106},
265  doi =          {10.1029/2001JC000922},
266}
267
268@ARTICLE{Ayina_al_JC06,
269  author =       {L.-H. Ayina and A. Bentamy and A. Munes-Mestaz and
270                  G. Madec},
271  title =        {The Impact of Satellite Winds and Latent Heat Fluxes
272                  in a Numerical Simulation of the Tropical Pacific
273                  Ocean},
274  journal =      JC,
275  year =         2006,
276  volume =       19,
277  pages =        {5889--5902}
278}
279
280@ARTICLE{Barnier_al_OD06,
281  author =       {B. Barnier and G. Madec and T. Penduff and
282                  J.-M. Molines and A.-M.  Treguier and J. Le Sommer
283                  and A. Beckmann and A. Biastoch and C. Boning and
284                  J. Dengg and C. Derval and E. Durand and S. Gulev
285                  and E. Remy and C. Talandier and S. Theetten and
286                  M. Maltrud and J. McClean and B. De Cuevas},
287  title =        {Impact of partial steps and momentum advection
288                  schemes in a global ocean circulation model at
289                  eddy-permitting resolution.},
290  journal =      OD,
291  year =         2006,
292  volume =       56,
293  pages =        {543--567},
294  doi =          {10.1007/s10236-006-0082-1},
295}
296
297@INCOLLECTION{Barnier1996,
298  author =       {B. Barnier and P. Marchesiello and A.P. de Miranda},
299  title =        {Modeling the ocean circulation in the South
300                  Atlantic: A strategy for dealing with open
301                  boundaries},
302  booktitle =    {The South Atlantic: Present and Past Circulation},
303  publisher =    {Springer-Verlag, Berlin},
304  year =         1996,
305  editor =       {G.Wefer and W.H. Berger and G Siedler and D. Webb},
306  pages =        {289-304}
307}
308
309@ARTICLE{Barnier1998,
310  author =       {B. Barnier and P. Marchesiello and A. P. de Miranda
311                  and J.M. Molines and M. Coulibaly},
312  title =        {A sigma-coordinate primitive equation model for
313                  studying the circulation in the South Atlantic I,
314                  Model configuration with error estimates},
315  journal =      DSR,
316  year =         1998,
317  volume =       45,
318  pages =        {543--572}
319}
320
321@ARTICLE{Barthelet_al_CRAS98,
322  author =       {P. Barthelet and S. Bony and P. Braconnot and
323                  A. Braum and D. Cariolle and E. Cohen-Solal and
324                  J.-L. Dufresne and P. Delecluse and M. D\'{e}qu\'{e}
325                  and L. Fairhead and M.-A. Filiberti and M. Forichon
326                  and J.-Y. Grandpeix and E. Guilyardi and
327                  M.-N. Houssais and M. Imbard and H. Le Treut and
328                  C. Lévy and Z.X. Li and G. Madec and P. Marquet and
329                  O. Marti and S. Planton and L. Terray and O. Thual
330                  and S. Valcke},
331  title =        {Global coupled simulations of climate change due to
332                  increased atmospheric CO2 concentration},
333  journal =      {C. R. Acad. Sci Paris},
334  year =         1998,
335  volume =       326,
336  pages =        {677--684}
337}
338
339@ARTICLE{Beckmann2003,
340  author =       {A. Beckmann and H. Goosse},
341  title =        {A parameterization of ice shelf-ocean interaction
342                  for climate models},
343  journal =      OM,
344  year =         2003,
345  volume =       5,
346  pages =        {157--170}
347}
348
349@ARTICLE{Beckmann1998,
350  author =       {A. Beckmann},
351  title =        {The representation of bottom boundary layer
352                  processes in numerical ocean circulation models.},
353  journal =      {Ocean modelling and parameterization,
354                  E. P. Chassignet and J. Verron (eds.), NATO Science
355                  Series, Kluwer Academic Publishers},
356  year =         1998
357}
358
359@ARTICLE{Beckmann_Doscher1997,
360  author =       {A. Beckmann and R. D\"{o}scher},
361  title =        {A method for improved representation of dense water
362                  spreading over topography in geopotential-coordinate
363                  models},
364  journal =      JPO,
365  year =         1997,
366  volume =       27,
367  pages =        {581--591}
368}
369
370@ARTICLE{Beckmann1993,
371  author =       {A. Beckmann and D. B. Haidvogel},
372  title =        {Numerical Simulation of Flow around a Tall Isolated
373                  Seamount.  Part I - Problem Formulation and Model
374                  Accuracy},
375  journal =      JPO,
376  year =         1993,
377  volume =       23,
378  number =       8,
379  pages =        {1736--1753}
380}
381
382@ARTICLE{Bernie_al_CD07,
383  author =       {D. Bernie and E. Guilyardi and G. Madec and
384                  J. M. Slingo and S. J. Woolnough},
385  title =        {Impact of resolving the diurnal cycle in an
386                  ocean--atmosphere GCM. Part 1: a diurnally forced
387                  OGCM},
388  journal =      CD,
389  year =         2007,
390  volume =       29,
391  number =       6,
392  pages =        {575--590}
393}
394
395@ARTICLE{Bernie_al_CD08,
396  author =       {D. Bernie and E. Guilyardi and G. Madec and
397                  J. M. Slingo and S. J. Woolnough},
398  title =        {Impact of resolving the diurnal cycle in an
399                  ocean--atmosphere GCM. Part 2: A diurnally coupled
400                  CGCM},
401  journal =      CD,
402  year =         2008,
403  volume =       31,
404  number =       7,
405  pages =        {909--925},
406  doi =          {10.1007/s00382-008-0429-z},
407}
408
409@ARTICLE{Bernie_al_JC05,
410  author =       {D. J. Bernie and S. J. Woolnough and J. M. Slingo
411                  and E. Guilyardi},
412  title =        {Modelling diurnal and intraseasonal variability of
413                  the ocean mixed layer},
414  journal =      JC,
415  year =         2005,
416  volume =       18,
417  number =       8,
418  pages =        {1190--1200}
419}
420
421@ARTICLE{Bessiere_al_GRL08,
422  author =       {L. Bessi\'{e}res and G. Madec and F. Lyard},
423  title =        {Global Tidal Residual Mean Circulation: Does it
424                  Affect a Climate OGCM?},
425  journal =      GRL,
426  year =         2008,
427  volume =       35,
428  pages =        {L03609},
429  doi =          {10.1029/2007GL032644},
430}
431
432@ARTICLE{Biastoch_al_JC08,
433  author =       {A. Biastoch and C. W. Böning and J. Getzlaff and
434                  J.-M. Molines and G. Madec},
435  title =        {Causes of interannual – decadal variability in the
436                  meridional overturning circulation of the
437                  mid-latitude North Atlantic Ocean},
438  journal =      JC,
439  year =         2008,
440  volume =       21,
441  number =       24,
442  pages =        {6599-6615},
443  doi =          {10.1175/2008JCLI2404.1},
444}
445
446@ARTICLE{Bignami_al_JGR95,
447  author =       {F. Bignami and S. Marullo and R. Santoleri and
448                  M. E. Schiano},
449  title =        {Longwave radiation budget in the Mediterranean Sea},
450  journal =      JGR,
451  year =         1995,
452  volume =       100,
453  number =       {C2},
454  pages =        {2501--2514},
455  doi =          {10.1029/94JC02496},
456}
457
458@ARTICLE{Blanke_al_JPO99,
459  author =       {B. Blanke and M. Arhan and G. Madec and S. Roche},
460  title =        {Warm Water Paths in the Equatorial Atlantic as
461                  Diagnosed with a General Circulation Model},
462  journal =      JPO,
463  year =         1999,
464  volume =       29,
465  number =       11,
466  pages =        {2753-2768}
467}
468
469@ARTICLE{Blanke1993,
470  author =       {B. Blanke and P. Delecluse},
471  title =        {Low frequency variability of the tropical Atlantic
472                  ocean simulated by a general circulation model with
473                  mixed layer physics},
474  journal =      JPO,
475  year =         1993,
476  volume =       23,
477  pages =        {1363--1388}
478}
479
480@ARTICLE{blanke_al_JC97,
481  author =       {B. Blanke and J. D. Neelin and D. Gutzler},
482  title =        {Estimating the effect of stochastic wind forcing on
483                  ENSO irregularity},
484  journal =      JC,
485  year =         1997,
486  volume =       10,
487  pages =        {1473--1486}
488}
489
490@ARTICLE{Blanke_Raynaud_JPO97,
491  author =       {B. Blanke and S. Raynaud},
492  title =        {Kinematics of the Pacific Equatorial Undercurrent:
493                  An Eulerian and Lagrangian Approach from GCM
494                  Results},
495  journal =      JPO,
496  year =         1997,
497  volume =       27,
498  number =       6,
499  pages =        {1038--1053}
500}
501
502@ARTICLE{Blanke_al_JPO01,
503  author =       {B. Blanke and S. Speich and G. Madec and K. Döös},
504  title =        {A global Diagnostic of interocean mass transfers},
505  journal =      JPO,
506  year =         2001,
507  volume =       31,
508  number =       6,
509  pages =        {1623--1632}
510}
511
512@ARTICLE{Blanke_al_GRL02,
513  author =       {B. Blanke and S. Speich and G. Madec and
514                  R. Maug\'{e}},
515  title =        {A global diagnostic of interior ocean ventilation},
516  journal =      GRL,
517  year =         2002,
518  volume =       29,
519  number =       8,
520  pages =        {1081--1084}
521}
522
523@ARTICLE{Blayo2005,
524  author =       {E. Blayo and L. Debreu},
525  title =        {Revisiting open boundary conditions from the point
526                  of view of characteristic variables},
527  journal =      OM,
528  year =         2005,
529  volume =       9,
530  pages =        {231--252}
531}
532
533@ARTICLE{Bloom_al_MWR96,
534  author =       {S. C. Bloom and L. L. Takacs and A. M. Da Silva and
535                  D. Ledvina},
536  title =        {Data assimilation using incremental analysis
537                  updates},
538  journal =      MWR,
539  year =         1996,
540  volume =       124,
541  pages =        {1256--1271}
542}
543
544@ARTICLE{Bopp_al_GBC01,
545  author =       {L. Bopp and P. Monfray and O. Aumont and
546                  J.-L. Dufresne and H. Le Treut and G. Madec and
547                  L. Terray and J.C. Orr},
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554  pages =        {81--101}
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606@article{Brankart_OM2013,
607  author =       "J.-M. Brankart",
608  title =        "Impact of uncertainties in the horizontal density
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611  journal =      OM,
612  year =         2013,
613  volume =       66,
614  pages =        "64--76",
615  issn =         "1463-5003",
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622                  Brasseur, P. and Verron, J.},
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624                  uncertainty in the NEMO ocean model},
625  JOURNAL =      {Geoscientific Model Development},
626  VOLUME =       8,
627  YEAR =         2015,
628  NUMBER =       5,
629  PAGES =        {1285--1297},
630  DOI =          {10.5194/gmd-8-1285-2015}
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632
633@ARTICLE{Breivik_al_JPO2014,
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635                  Jean-Raymond Bidlot},
636  YEAR =         2014,
637  TITLE =        "{Approximate Stokes Drift Profiles in Deep Water}",
638  JOURNAL =      {JPO},
639  VOLUME =       44,
640  NUMBER =       9,
641  DOI =          {10.1175/JPO-D-14-0020.1.},
642  PAGES =        {2433--2445, arXiv:1406.5039}
643}
644
645@ARTICLE{Breivik_al_OM2016,
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648  YEAR =         2016,
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650                  spectrum}",
651  JOURNAL =      {OM},
652  VOLUME =       100,
653  DOI =          {10.1016/j.ocemod.2016.01.005},
654  PAGES =        {49--56, arXiv:1601.08092}
655}
656
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665  number =       {3-4},
666  pages =        {88--104}
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677  volume =       109,
678  pages =        {C12003},
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681
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737@ARTICLE{Burchard_OM02,
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744  number =       {3-4},
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767  number =       {1-2},
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808  institution =  {European Union: Marine Environment and Security for
809                  the European Area (MERSEA) Integrated Project},
810  note =         {MERSEA-WP09-MERCA-TASK-9.1.1}
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812
813@ARTICLE{Chassignet_al_JPO03,
814  author =       {Eric P. Chassignet and Linda T. Smith and George
815                  R. Halliwell},
816  title =        {North Atlantic Simulations with the Hybrid
817                  Coordinate Ocean Model (HYCOM): Impact of the
818                  Vertical Coordinate Choice, Reference Pressure, and
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820  journal =      JPO,
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840  pages =        {775--787}
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851  number =       12,
852  pages =        {2546--2559}
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902  pages =        {163pp}
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955  pages =        {8--13}
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958@article{de_lavergne_JPO2016_mixing,
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961  title =        {On Antarctic Bottom Water consumption in the abyssal
962                  ocean},
963  issn =         {0022-3670},
964  doi =          {10.1175/JPO-D-14-0201.1},
965  journal =      {Journal of Physical Oceanography},
966  year =         2016,
967  volume =       46,
968  pages =        {635-–661}
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971@article{de_lavergne_JPO2016_efficiency,
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975                  abyssal overturning},
976  issn =         {0022-3670},
977  doi =          {10.1175/JPO-D-14-0259.1},
978  journal =      {Journal of Physical Oceanography},
979  year =         2016,
980  volume =       46,
981  pages =        {663-–681}
982}
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1001  school =       {Doctorat es Applied Mathematiques, Grenoble
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1004  pages =        {138pp}
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1045  volume =       17,
1046  pages =        {698--707}
1047}
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1049@ARTICLE{Drijfhout_JPO94,
1050  author =       {S. S. Drijfhout},
1051  title =        {Heat transport by Mesoscale Eddies in an Ocean
1052                  Circulation Model},
1053  journal =      JPO,
1054  year =         1994,
1055  volume =       24,
1056  pages =        {353--369}
1057}
1058
1059@ARTICLE{Dukowicz1994,
1060  author =       {J. K. Dukowicz and R. D. Smith},
1061  title =        {Implicit free-surface method for the
1062                  Bryan-Cox-Semtner ocean model},
1063  journal =      JGR,
1064  year =         1994,
1065  volume =       99,
1066  pages =        {7991--8014}
1067}
1068
1069@ARTICLE{Durand_al_JC07,
1070  author =       {F. Durand and D. Shankar and C. de Boyer
1071                  Mont\'{e}gut and S.S.C.  Shenoi and B. Blanke and
1072                  G. Madec},
1073  title =        {Modeling the barrier-layer formation in the
1074                  South-Eastern Arabian Sea},
1075  journal =      JC,
1076  year =         2007,
1077  volume =       20,
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1079  pages =        {2109--2120}
1080}
1081
1082@ARTICLE{Durand_al_GRL04,
1083  author =       {F. Durand and S. R. Shetye and J. Vialard and
1084                  D. Shankar and S.S.C.  Shenoi and C. Eth\'{e} and
1085                  G. Madec},
1086  title =        {Impact of temperature inversions on SST evolution in
1087                  the South−Eastern Arabian Sea during the pre−summer
1088                  monsoon season},
1089  journal =      GRL,
1090  year =         2004,
1091  volume =       31,
1092  pages =        {L01305},
1093  doi =          {10.1029/2003GL018906},
1094}
1095
1096@INCOLLECTION{Durran2001,
1097  author =       {D.R. Durran },
1098  title =        {Open boundary conditions: fact and fiction},
1099  booktitle =    {Advances in Mathematical Modelling of Atmosphere and
1100                  Ocean Dynamics},
1101  publisher =    {Kluwer Academic Publishers},
1102  year =         2001,
1103  editor =       {P.F. Hodnett}
1104}
1105
1106@ARTICLE{Dutay_al_OM02,
1107  author =       {J.-C. Dutay and J.L. Bullister and S.C. Doney and
1108                  J.C. Orr and R.  Najjar and K. Caldeira and
1109                  J.-M. Campin and H. Drange and M. Follows and Y. Gao
1110                  and N. Gruber and M. W. Hecht and A. Ishida and
1111                  F. Joos and K. Lindsay and G. Madec and
1112                  E. Maier-Reimer and J.C. Mashall and R. J. Matear
1113                  and P. Monfray and G.-K. Plattner and J. Sarmiento
1114                  and R. Schlitzer and R. Slater and I.J. Totterdell
1115                  and M.-F. Weirig and Y. Yamanaka and A. Tool},
1116  title =        {Evaluation of ocean model ventilation with CFC-11:
1117                  comparison of 13 global ocean models},
1118  journal =      OM,
1119  year =         2002,
1120  volume =       4,
1121  pages =        {89--120}
1122}
1123
1124@ARTICLE{Dutay_al_EFM09,
1125  author =       {J.-C. Dutay and J. Emile-Geay and D. Iudicone and
1126                  P. Jean-Baptiste and G. Madec and C. Carouge},
1127  title =        {Helium Isotopic Constraints on Simulated Ocean
1128                  Circulations - Implications for abyssal theories},
1129  journal =      EFM,
1130  year =         2009,
1131  volume =       10,
1132  number =       {1-2},
1133  pages =        {257--273},
1134  doi =          {10.1007/s10652-009-9159-y}
1135}
1136
1137@ARTICLE{Dutay.J.C2004,
1138  author =       {J. -C. Dutay and P. J. -Baptiste and J. -M. Campin
1139                  and A. Ishida and E. M. -Reimer and R. J. Matear and
1140                  A. Mouchet and I. J. Totterdell and Y. Yamanaka and
1141                  K. Rodgers and G. Madec and J.C. Orr},
1142  title =        {Evaluation of OCMIP-2 ocean models’ deep
1143                  circulation with mantle helium-3},
1144  journal =      JMS,
1145  year =         2004,
1146  pages =        {1--22}
1147}
1148
1149@ARTICLE{D'Ortenzio_al_GRL05,
1150  author =       {F. D\'Ortenzio and D. Iudicone and C. de Boyer
1151                  Mont\'{e}gut and P.  Testor and D. Antoine and
1152                  S. Marullo and R. Santoleri and G. Madec},
1153  title =        {Seasonal variability of the mixed layer depth in the
1154                  Mediterranean Sea : a new climatology based on
1155                  analysis of individual profiles},
1156  journal =      GRL,
1157  year =         2005,
1158  volume =       32,
1159  pages =        {L12605},
1160  doi =          {10.1029/2005GL022463},
1161}
1162
1163@ARTICLE{Egbert_Ray_JGR01,
1164  author =       {G.B. Egbert and R.D. Ray},
1165  title =        {Estimates of M2 tidal energy dissipation from
1166                  TOPEX/POSEIDON altimeter data},
1167  journal =      JGR,
1168  year =         2001,
1169  volume =       106,
1170  pages =        {22475--22502}
1171}
1172
1173@ARTICLE{Egbert_Ray_Nat00,
1174  author =       {G.B. Egbert and R.D Ray},
1175  title =        {Significant dissipation of tidal energy in the deep
1176                  ocean inferred from satellite altimeter data},
1177  journal =      {Nature},
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1180  pages =        {775--778}
1181}
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1190}
1191
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1193  author =       {J. Emile-Geay and G. Madec},
1194  title =        {Geothermal heating, diapycnal mixing and the abyssal
1195                  circulation},
1196  journal =      OS,
1197  year =         2009,
1198  volume =       5,
1199  pages =        {281--325}
1200}
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1208  journal =      {Tellus},
1209  volume =       {47A},
1210  pages =        {365--382}
1211}
1212
1213@ARTICLE{EUROMODEL_OA95,
1214  author =       {EUROMODEL Group (P.M. Lehucher, L. Beautier,
1215                  M. Chartier, F. Martel, L. Mortier, P. Brehmer,
1216                  C. Millot, C. Alberola, M. Benzhora,
1217                  I. Taupier-Letage, G. Chabert d'Hieres, H. Didelle,
1218                  P. Gleizon, D. Obaton, M. Cr\'{e}pon, C. Herbaut,
1219                  G. Madec, S. Speich, J. Nihoul, J. M. Beckers,
1220                  P. Brasseur, E. Deleersnijder, S. Djenidi, J. Font,
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1222                  M. Manriquez, M. Maso, J. Salat, J. Tintore,
1223                  S. Alonso, D. Gomis, A. Viudez, M. Astraldi,
1224                  D. Bacciola, M. Borghini, F. Dell'amico, C. Galli,
1225                  E. Lazzoni, G. P. Gasparini, S. Sparnocchia, and
1226                  A. Harzallah)},
1227  title =        {Progress from 1989 to 1992 in
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1233  number =       2,
1234  pages =        {255--271}
1235}
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1238  author =       {M. Farge},
1239  title =        {Dynamique non lineaire des ondes et des tourbillons
1240                  dans les equations de Saint Venant},
1241  school =       {Doctorat es Mathematiques, Paris VI University,
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1244  pages =        {401pp}
1245}
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1248  author =       {D. E. Farrow and D. P. Stevens},
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1250                  ocean general circulation models},
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1252  year =         1995,
1253  volume =       25,
1254  pages =        {1731--1741.}
1255}
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1262  journal =      {Memoires de la Societ\'{e} Royale des Sciences de
1263                  Li\`{e}ge},
1264  volume =       6,
1265  pages =        {141--164}
1266}
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1270  year =         1994,
1271  title =        {A storm surge prediction model for the northern Bay
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1275  volume =       24,
1276  pages =        {172--190}
1277}
1278
1279@ARTICLE{Fujio1991,
1280  author =       {S. Fujio and N. Imasato},
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1285  volume =       96,
1286  pages =        {759--774}
1287}
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1291                  A. Rosati},
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1296  volume =       45,
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1310  title =        {A simple eddy kinetic energy model for simulations
1311                  of the oceanic vertical mixing\: Tests at Station
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1322  journal =      JPO,
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1324  volume =       20,
1325  number =       1,
1326  pages =        {150--155},
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1330  author =       {C. L. Gentemann and P. J. Minnett and B. Ward},
1331  title =        {Profiles of Ocean Surface heating ({POSH}): A new
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1335  Volume =       114,
1336  Pages =        {C07017},
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1338}
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1341  author =       {R. Gerdes},
1342  title =        {A primitive equation ocean circulation model using a
1343                  general vertical coordinate transformation
1344                  1. Description and testing of the model},
1345  journal =      JGR,
1346  year =         1993,
1347  volume =       98
1348}
1349
1350@ARTICLE{Gerdes1993b,
1351  author =       {R. Gerdes},
1352  title =        {A primitive equation ocean circulation model using a
1353                  general vertical coordinate transformation
1354                  2. Application to an overflow problem},
1355  journal =      JGR,
1356  year =         1993,
1357  volume =       98,
1358  pages =        {14703--14726}
1359}
1360
1361@ARTICLE{Gerdes1991,
1362  Author =       {Gerdes, R{\"u}diger and K{\"o}berle, Cornelia and
1363                  Willebrand, J{\"u}rgen},
1364  Doi =          {10.1007/BF00210006},
1365  Journal =      {Clim. Dynamics},
1366  Number =       4,
1367  Pages =        {211--226},
1368  Title =        {The influence of numerical advection schemes on the
1369                  results of ocean general circulation models},
1370  Volume =       5,
1371  Year =         1991,
1372}
1373
1374@TECHREPORT{Gibson_TR86,
1375  author =       {J. K. Gibson},
1376  title =        {Standard software development and maintenance},
1377  institution =  {Operational Dep., ECMWF, Reading, UK.},
1378  year =         1986
1379}
1380
1381@BOOK{Gill1982,
1382  title =        {Atmosphere-Ocean Dynamics},
1383  publisher =    {International Geophysics Series, Academic Press,
1384                  New-York},
1385  year =         1982,
1386  author =       {A. E. Gill}
1387}
1388
1389@article{goff_JGR2010,
1390  author =       {J. A. Goff},
1391  title =        {Global prediction of abyssal hill root-mean-square
1392                  heights from small-scale altimetric gravity
1393                  variability},
1394  issn =         {2156-2202},
1395  doi =          {10.1029/2010JB007867},
1396  volume =       115,
1397  number =       {B12},
1398  journal =      {Journal of Geophysical Research: Solid Earth},
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1404  author =       {H. Goosse and E. Deleersnijder and T. Fichefet and
1405                  M. England},
1406  title =        {Sensitivity of a global coupled ocean-sea ice model
1407                  to the parameterization of vertical mixing},
1408  journal =      JGR,
1409  year =         1999,
1410  volume =       104,
1411  pages =        {13,681--13,695}
1412}
1413
1414@ARTICLE{Gorgues_al_GRL07,
1415  author =       {T. Gorgues and C. Menkes and O. Aumont and
1416                  K. Rodgers and G. Madec and Y. Dandonneau},
1417  title =        {Indonesian Throughflow control of the eastern
1418                  equatorial Pacific biogeochemistry},
1419  journal =      GRL,
1420  year =         2007,
1421  volume =       34,
1422  pages =        {L05609},
1423  doi =          {10.1029/2006GL028210},
1424}
1425
1426@ARTICLE{Graham_McDougall_JPO13,
1427  author =       {F.S. Graham and T.J. McDougall},
1428  title =        {Quantifying the nonconservative production of
1429                  conservative temperature, potential temperature, and
1430                  entropy},
1431  journal =      JPO,
1432  year =         2013,
1433  volume =       43,
1434  pages =        {838--862},
1435  doi =          {10.1175/JPO-D-11-0188.1}
1436}
1437
1438@ARTICLE{Greatbatch_JGR94,
1439  author =       {R. J. Greatbatch},
1440  title =        {A note on the representation of steric sea level in
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1443  year =         1994,
1444  volume =       99,
1445  number =       {C6},
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1447}
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1449@BOOK{Griffies_Bk04,
1450  title =        {Fundamentals of ocean climate models},
1451  publisher =    {Princeton University Press, 434pp},
1452  year =         2004,
1453  author =       {S.M. Griffies}
1454}
1455
1456@ARTICLE{Griffies_JPO98,
1457  author =       {S.M. Griffies},
1458  title =        {The Gent-McWilliams skew-flux},
1459  journal =      JPO,
1460  year =         1998,
1461  volume =       28,
1462  pages =        {831--841}
1463}
1464
1465@ARTICLE{Griffies_al_OM09,
1466  author =       {S.M. Griffies and A. Biastoch and C. Boning and
1467                  F. Bryan and G. Danabasoglu and E. P. Chassignet and
1468                  M. H. England and R. Gerdes and H. Haak and
1469                  R. W. Hallberg and W. Hazeleger and J. Jungclaus and
1470                  W. G. Large and G. Madec and A. Pirani and
1471                  B. L. Samuels and M. Scheinert and A. Sen Gupta and
1472                  C. A. Severijns and H. L. Simmons and A.-M. Treguier
1473                  and M. Winton and S. Yeager and J. Yin},
1474  title =        {Coordinated Ocean-ice Reference Experiments (COREs)},
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1477  volume =       26,
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1479  pages =        {1--46},
1480  doi =          {10.1016/j.ocemod.2008.08.007},
1481}
1482
1483@ARTICLE{Griffies_al_OS05,
1484  author =       {S.M. Griffies and A. Gnanadesikan and K.W. Dixon and
1485                  J.P. Dunne and R. Gerdes and M.J. Harrison and
1486                  A. Rosati and J.L. Russell and B.L.  Samuels and
1487                  M.J. Spelman and M. Winton and R. Zhang},
1488  title =        {Formulation of an ocean model for global climate
1489                  simulations},
1490  journal =      OS,
1491  year =         2005,
1492  volume =       1,
1493  pages =        {45--79}
1494}
1495
1496@ARTICLE{Griffies_al_JPO98,
1497  author =       {S.M. Griffies and A. Gnanadesikan and
1498                  R.C. Pacanowski and V.D. Larichev and J.K. Dukowicz
1499                  and R.D. Smith},
1500  title =        {Isoneutral Diffusion in a z-Coordinate Ocean Model},
1501  journal =      JPO,
1502  year =         1998,
1503  volume =       28,
1504  number =       5,
1505  pages =        {805--830},
1506}
1507
1508@ARTICLE{Griffies_al_MWR01,
1509  author =       {S.M. Griffies and R.C. Pacanowski and M. Schmidt and
1510                  V. Balaji},
1511  title =        {Tracer Conservation with an Explicit Free Surface
1512                  Method for z-Coordinate Ocean Models},
1513  journal =      MWR,
1514  year =         2001,
1515  volume =       129,
1516  number =       5,
1517  pages =        {1081--1098},
1518}
1519
1520@ARTICLE{Griffies_Hallberg_MWR00,
1521  author =       {S.M. Griffies and R.W. Hallberg},
1522  title =        {Biharmonic friction with a Smagorinsky-like
1523                  viscosity for use in large-scale eddy-permitting
1524                  ocean models},
1525  journal =      MWR,
1526  year =         2000,
1527  volume =       128,
1528  pages =        {2935–-2946},
1529  doi =          {10.1175/1520-0493(2000)128}
1530}
1531
1532@ARTICLE{Guilyardi_al_JC04,
1533  author =       {E. Guilyardi and S. Gualdi and J. M. Slingo and
1534                  A. Navarra and P. Delecluse and J. Cole and G. Madec
1535                  and M. Roberts and M. Latif and L. Terray},
1536  title =        {Representing El Ni\~{n}o in coupled ocean-atmosphere
1537                  GCMs: the dominant role of the atmospheric
1538                  component},
1539  journal =      JC,
1540  year =         2004,
1541  volume =       17,
1542  pages =        {4623--4629}
1543}
1544
1545@ARTICLE{Guilyardi_Madec_CD98,
1546  author =       {E. Guilyardi and G. Madec},
1547  title =        {Performance of the OPA-ARPEGE-T21 global
1548                  ocean-atmosphere coupled model},
1549  journal =      CD,
1550  year =         1997,
1551  volume =       13,
1552  pages =        {149--165}
1553}
1554
1555@ARTICLE{Guilyardi_al_CD01,
1556  author =       {E. Guilyardi and G. Madec and L. Terray},
1557  title =        {The role of lateral ocean physics in the upper ocean
1558                  thermal balance of a coupled ocean-atmosphere GCM},
1559  journal =      CD,
1560  year =         2001,
1561  volume =       17,
1562  pages =        {589--599},
1563  number =       8
1564}
1565
1566@ARTICLE{Guilyardi_al_CRAS95,
1567  author =       {E. Guilyardi and G. Madec and L. Terray and
1568                  M. D\'{e}qu\'{e} and M. Pontaud and M. Imbard and
1569                  D. Stephenson and M.-A. Filiberti and D. Cariolle
1570                  and P. Delecluse and O. Thual},
1571  title =        {Simulation couplée océan-atmosphère de la
1572                  variabilité du climat},
1573  journal =      {C. R. Acad. Sci Paris},
1574  year =         1995,
1575  volume =       320,
1576  number =       {s\'{e}rie IIa},
1577  pages =        {683--690}
1578}
1579
1580@ARTICLE{Guyon_al_EP99,
1581  author =       {M. Guyon and G. Madec and F.-X. Roux and M. Imbard},
1582  title =        {A Parallel ocean model for high resolution studies},
1583  journal =      {Lecture Notes in Computer Science},
1584  year =         1999,
1585  volume =       {Euro-Par'99},
1586  pages =        {603--607}
1587}
1588
1589@ARTICLE{Guyon_al_CalPar99,
1590  author =       {M. Guyon and G. Madec and F.-X. Roux and M. Imbard
1591                  and C. Herbaut and P. Fronier},
1592  title =        {Parallelization of the OPA ocean model},
1593  journal =      {Calculateurs Paralleles},
1594  year =         1999,
1595  volume =       11,
1596  number =       4,
1597  pages =        {499--517}
1598}
1599
1600@BOOK{Haltiner1980,
1601  title =        {Numerical prediction and dynamic meteorology},
1602  publisher =    {John Wiley {\&} Sons Eds., second edition},
1603  year =         1980,
1604  author =       {G. J. Haltiner and R. T. Williams},
1605  pages =        {477pp}
1606}
1607
1608@ARTICLE{Haney1991,
1609  author =       {R. L. Haney},
1610  title =        {On the Pressure Gradient Force over Steep Topography
1611                  in Sigma Coordinate Ocean Models},
1612  journal =      JPO,
1613  year =         1991,
1614  volume =       21,
1615  number =       4,
1616  pages =        {610--619},
1617}
1618
1619@ARTICLE{Hazeleger_Drijfhout_JPO98,
1620  author =       {W. Hazeleger and S. S. Drijfhout},
1621  title =        {Mode water variability in a model of the subtropical
1622                  gyre: response to anomalous forcing},
1623  journal =      JPO,
1624  year =         1998,
1625  volume =       28,
1626  pages =        {266--288},
1627}
1628
1629@ARTICLE{Hazeleger_Drijfhout_JPO99,
1630  author =       {W. Hazeleger and S. S. Drijfhout},
1631  title =        {Stochastically forced mode water variability},
1632  journal =      JPO,
1633  year =         1999,
1634  volume =       29,
1635  pages =        {1772--1786},
1636}
1637
1638@ARTICLE{Hazeleger_Drijfhout_JGR00,
1639  author =       {W. Hazeleger and S. S. Drijfhout},
1640  title =        {A model study on internally generated variability in
1641                  subtropical mode water formation},
1642  journal =      JGR,
1643  year =         2000,
1644  volume =       105,
1645  pages =        {13,965--13,979},
1646}
1647
1648@ARTICLE{Hazeleger_Drijfhout_JPO00,
1649  author =       {W. Hazeleger and S. S. Drijfhout},
1650  title =        {Eddy subduction in a model of the subtropical gyre},
1651  journal =      JPO,
1652  year =         2000,
1653  volume =       30,
1654  pages =        {677--695},
1655}
1656
1657@ARTICLE{Hellerman_Rosenstein_JPO83,
1658  author =       {S. Hellerman and M. Rosenstein },
1659  title =        {Normal monthly wind stress over the world ocean with
1660                  error estimates},
1661  journal =      JPO,
1662  year =         1983,
1663  volume =       13,
1664  pages =        {1093--1104},
1665}
1666
1667@ARTICLE{He_Ding_JSC01,
1668  author =       {Y. He and C. H. Q. Ding},
1669  title =        {Using Accurate Arithmetics to Improve Numerical
1670                  Reproducibility and Stability in Parallel
1671                  Applications},
1672  journal =      JSC,
1673  year =         2001,
1674  volume =       18,
1675  pages =        {259--277},
1676}
1677
1678@ARTICLE{Hirt_al_JCP74,
1679  author =       {C. W. Hirt and A. A. Amsden and J. L. Cook},
1680  title =        {An Arbitrary Lagrangian--Eulerian Computing Method
1681                  for All Flow Speeds},
1682  journal =      JCP,
1683  year =         1974,
1684  volume =       14,
1685  pages =        {227--253}
1686}
1687
1688@ARTICLE{Hofmeister_al_OM09,
1689  author =       {R. Hofmeister and H. Burchard and J.-M. Beckers},
1690  title =        {Non-uniform adaptive vertical grids for 3D numerical
1691                  ocean models},
1692  journal =      OM,
1693  year =         2009,
1694  volume =       33,
1695  pages =        {70--86},
1696  doi =          {10.1016/j.ocemod.2009.12.003},
1697  issn =         {1463-5003},
1698}
1699
1700@ARTICLE{Holland1999,
1701  author =       {D. Holland and A. Jenkins},
1702  title =        {Modeling Thermodynamic Ice-Ocean Interactions at the
1703                  Base of an Ice Shelf},
1704  journal =      JPO,
1705  year =         1999,
1706  volume =       29,
1707  pages =        {1787--1800},
1708}
1709
1710@ARTICLE{HollowayOM86,
1711  author =       {Greg Holloway},
1712  title =        {A Shelf Wave/Topographic Pump Drives Mean Coastal
1713                  Circulation (part I)},
1714  journal =      OM,
1715  year =         1986,
1716  volume =       68,
1717}
1718
1719@ARTICLE{HollowayJPO92,
1720  author =       {Greg Holloway},
1721  title =        {Representing Topographic Stress for Large-Scale
1722                  Ocean Models},
1723  journal =      JPO,
1724  year =         1992,
1725  volume =       22,
1726  pages =        {1033--1046},
1727}
1728
1729@ARTICLE{HollowayJPO94,
1730  author =       {Michael Eby and Greg Holloway},
1731  title =        {Sensitivity of a Large-Scale Ocean Model to a
1732                  Parameterization of Topographic Stress},
1733  journal =      JPO,
1734  year =         1994,
1735  volume =       24,
1736  pages =        {2577--2587},
1737}
1738
1739@ARTICLE{HollowayJGR09,
1740  author =       {Greg Holloway and Zeliang Wang},
1741  title =        {Representing eddy stress in an Arctic Ocean model},
1742  journal =      JGR,
1743  year =         2009,
1744  doi =          {10.1029/2008JC005169},
1745}
1746
1747@ARTICLE{HollowayOM08,
1748  author =       {Mathew Maltrud and Greg Holloway},
1749  title =        {Implementing biharmonic neptune in a global eddying
1750                  ocean model},
1751  journal =      OM,
1752  year =         2008,
1753  volume =       21,
1754  pages =        {22--34},
1755}
1756
1757@ARTICLE{Hordoir_al_CD08,
1758  author =       {R. Hordoir and J. Polcher and J.-C. Brun-Cottan and
1759                  G. Madec},
1760  title =        {Towards a parametrization of river discharges into
1761                  ocean general circulation models: a closure through
1762                  energy conservation},
1763  journal =      CD,
1764  year =         2008,
1765  volume =       31,
1766  number =       {7-8},
1767  pages =        {891--908},
1768  doi =          {10.1007/s00382-008-0416-4},
1769}
1770
1771@ARTICLE{Hsu1990,
1772  author =       {Hsu, Yueh-Jiuan G. and Arakawa, Akio},
1773  title =        {Numerical Modeling of the Atmosphere with an
1774                  Isentropic Vertical Coordinate},
1775  journal =      MWR,
1776  year =         1990,
1777  volume =       118,
1778  number =       10,
1779  pages =        {1933--1959},
1780}
1781
1782@ARTICLE{Huang_JPO93,
1783  author =       {R.X. Huang},
1784  title =        {Real freshwater flux as a natural boundary condition
1785                  for the salinity balance and thermohaline
1786                  circulation forced by evaporation and precipitation},
1787  journal =      JPO,
1788  year =         1993,
1789  volume =       23,
1790  pages =        {2428--2446}
1791}
1792
1793@TECHREPORT{Hunke2008,
1794  author =       {E.C. Hunke and W.H. Lipscomb},
1795  title =        {CICE: the Los Alamos sea ice model documentation and
1796                  software user's manual, Version 4.0},
1797  institution =  { Los Alamos National Laboratory, N.M.},
1798  publisher =    {LA-CC-06-012, Los Alamos National Laboratory, N.M.},
1799  year =         2008
1800}
1801
1802@TechReport{Hunter2006,
1803  Title =        {Specification for Test Models of Ice Shelf Cavities},
1804  Author =       {J. R. Hunter},
1805  Institution =  {Antarctic Climate \& Ecosystems Cooperative Research
1806                  Centre Private Bag 80, Hobart, Tasmania 7001},
1807  Year =         2006,
1808}
1809
1810@TECHREPORT{TEOS10,
1811  author =       {IOC and SCOR and IAPSO},
1812  title =        {The international thermodynamic equation of seawater
1813                  - 2010: Calculation and use of thermodynamic
1814                  properties},
1815  institution =  {Intergovernmental Oceanographic Commission},
1816  publisher =    {Manuals and Guides No. 56, UNESCO (English)},
1817  year =         2010,
1818  pages =        {196pp},
1819  url =          {http://www.teos-10.org/pubs/TEOS-10_Manual.pdf}
1820}
1821
1822@ARTICLE{Iudicone_al_JPO08b,
1823  author =       {D. Iudicone and G. Madec and B. Blanke and
1824                  S. Speich},
1825  title =        {The role of Southern Ocean surface forcings and
1826                  mixing in the global conveyor},
1827  journal =      JPO,
1828  year =         2008,
1829  volume =       38,
1830  pages =        {1377--1400}
1831}
1832
1833@ARTICLE{Iudicone_al_JPO08a,
1834  author =       {D. Iudicone and G. Madec and T. J. McDougall},
1835  title =        {Diagnosing water transformations and the key role of
1836                  light penetration},
1837  journal =      JPO,
1838  year =         2008,
1839  volume =       38,
1840  pages =        {1357--1376}
1841}
1842
1843@ARTICLE{Iudicone_al_JPO07,
1844  author =       {D. Iudicone and K. Rodgers and R. Schopp and
1845                  G. Madec},
1846  title =        {An Exchange window for the Antarctic Intermediate
1847                  Water Injection into the South Pacific},
1848  journal =      JPO,
1849  year =         2007,
1850  volume =       37,
1851  pages =        {31--49}
1852}
1853
1854@ARTICLE{Iudicone_al_JPO08c,
1855  author =       {D. Iudicone and S. Speich and G. Madec and
1856                  B. Blanke},
1857  title =        {The global Conveyor Belt in a Southern Ocean
1858                  perspective},
1859  journal =      JPO,
1860  year =         2008,
1861  volume =       38,
1862  pages =        {1401--1425}
1863}
1864
1865@ARTICLE{Izumo_al_CD10,
1866  author =       {T. Izumo and S.Masson and J. Vialard and C. de Boyer
1867                  Montegut and S. K. Behera and G. Madec and
1868                  K. Takahashi and T. Yamagata},
1869  title =        {Interannual variations of low-frequency
1870                  Madden-Julian Oscillation in autral summer:
1871                  Observations},
1872  journal =      CD,
1873  year =         2010,
1874  volume =       35,
1875  number =       4,
1876  pages =        {669--683},
1877  doi =          {10.1007/s00382-009-0655-z}
1878}
1879
1880@ARTICLE{JackMcD1995,
1881  author =       {D. R. Jackett and T. J. McDougall},
1882  title =        {Minimal adjustment of hydrographic data to achieve
1883                  static stability},
1884  journal =      JAOT,
1885  year =         1995,
1886  volume =       12,
1887  pages =        {381--389}
1888}
1889
1890@article{Jackson_Rehmann_JPO2014,
1891  author =       {P. R. Jackson and C. R. Rehmann},
1892  title =        {Experiments on differential scalar mixing in
1893                  turbulence in a sheared, stratified flow},
1894  journal =      JPO,
1895  volume =       44,
1896  issn =         {0022-3670},
1897  doi =          {10.1175/JPO-D-14-0027.1},
1898  number =       10,
1899  year =         2014,
1900  pages =        {2661--2680},
1901}
1902
1903@TECHREPORT{Janssen_al_TM13,
1904  author =       {P.A.E.M. Janssen and {\O}. Breivik and K. Mogensen
1905                  and F. Vitart and M. Balmaseda and J.B. Bidlot and
1906                  S. Keeley and M. Leut-becher and L. Magnusson and
1907                  F. Molteni},
1908  title =        {Air-Sea Interaction and Surface Waves},
1909  year =         2013,
1910  volume =       712,
1911  institution =  {ECMWF},
1912}
1913
1914@ARTICLE{Jayne_St_Laurent_GRL01,
1915  author =       {S.R. Jayne and L.C. {St. Laurent}},
1916  title =        {Parameterizing tidal disspiation over rough
1917                  topography},
1918  journal =      GRL,
1919  pages =        {811--814}
1920}
1921
1922@ARTICLE{Jenkins1991,
1923  author =       {A. Jenkins},
1924  title =        {A one-dimensional model of ice shelf-ocean
1925                  interaction},
1926  journal =      JGR,
1927  year =         1991,
1928  volume =       96,
1929  number =       {C11},
1930  pages =        {2298--2312}
1931}
1932
1933@ARTICLE{Jenkins2001,
1934  author =       {A. Jenkins},
1935  title =        {The Role of Meltwater Advection in the Formulation
1936                  of Conservative Boundary Conditions at an Ice-Ocean
1937                  Interface},
1938  journal =      JPO,
1939  year =         2001,
1940  volume =       31,
1941  pages =        {285--296}
1942}
1943
1944@ARTICLE{Jenkins2010,
1945  author =       {A. Jenkins},
1946  title =        {observation and parameterization of ablation at the
1947                  base of Ronne Ice Shelf, Antarctica},
1948  journal =      JPO,
1949  year =         2010,
1950  volume =       40,
1951  number =       10,
1952  pages =        {2298--2312}
1953}
1954
1955@BOOK{Jerlov_Bk68,
1956  title =        {Optical Oceanography},
1957  publisher =    {Elsevier},
1958  year =         1968,
1959  author =       {N. G. Jerlov},
1960  pages =        {194pp}
1961}
1962
1963@ARTICLE{Jones_MWR99,
1964  author =       {P. W. Jones},
1965  title =        {First- and second-order conservative remapping
1966                  schemes for grids in spherical coordinates},
1967  journal =      MWR,
1968  year =         1999,
1969  volume =       127,
1970  pages =        {2204--2210}
1971}
1972
1973@BOOK{Jones_Bk01,
1974  title =        {A User's Guide for SCRIP: A Spherical Coordinate
1975                  Remapping and Interpolation Package. Version 1.4},
1976  publisher =    {Los Alamos National Laboratory},
1977  year =         2001,
1978  author =       {P. W. Jones},
1979  pages =        {27pp},
1980  url =
1981                  {http://climate.lanl.gov/Software/SCRIP/SCRIPusers.pdf}
1982}
1983
1984@TECHREPORT{Jones_1998,
1985  title =        {A User's Guide for SCRIP: A Spherical Coordinate
1986                  Remapping and Interpolation Package. Version 1.4},
1987  institution =  {Los Alamos National Laboratory},
1988  year =         1998,
1989  author =       {P. W. Jones},
1990  url =
1991                  {http://climate.lanl.gov/Software/SCRIP/SCRIPusers.pdf}
1992}
1993
1994@ARTICLE{Kantha_Clayson_1994,
1995  author =       {L. H. Kantha and C. A. Clayson},
1996  title =        {An improved mixed layer model for geophysical
1997                  applications},
1998  journal =      JGR,
1999  year =         1994,
2000  volume =       99,
2001  pages =        {25,235--25,266}
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2003
2004@ARTICLE{Kantha_Carniel_CSR05,
2005  author =       {L. Kantha and S. Carniel},
2006  title =        {Comment on ''Generic length-scale equation for
2007                  geophysical turbulence models'' by L. Umlauf and
2008                  H. Burchard},
2009  journal =      JMS,
2010  year =         2005,
2011  volume =       61,
2012  pages =        {693--702}
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2014
2015@ARTICLE{Kasahara_MWR74,
2016  author =       {A. Kasahara},
2017  title =        {Various vertical coordinate systems used for
2018                  numerical weather prediction},
2019  journal =      MWR,
2020  year =         1974,
2021  volume =       102,
2022  pages =        {509--522}
2023}
2024
2025@ARTICLE{Killworth_al_JPO91,
2026  author =       {P.D. Killworth and D. Stainforth and D.J. Webb and
2027                  S.M. Paterson},
2028  title =        {The Development of a Free-Surface Bryan-Cox-Semtner
2029                  Ocean Model},
2030  journal =      JPO,
2031  year =         1991,
2032  volume =       21,
2033  number =       9,
2034  pages =        {1333--1348}
2035}
2036
2037@INPROCEEDINGS{Killworth1989,
2038  author =       {P. D. Killworth},
2039  title =        {On the parameterization of deep convection in ocean
2040                  models},
2041  booktitle =    {Parameterization of small-scale processes},
2042  year =         1989,
2043  editor =       {Hawaiian winter workshop},
2044  month =        {January 17-20},
2045  organization = {University of Hawaii at Manoa}
2046}
2047
2048@ARTICLE{Killworth1992,
2049  author =       {P. D. Killworth},
2050  title =        {An equivalent-barotropic mode in the fine resolution
2051                  Antarctic model},
2052  journal =      JPO,
2053  year =         1992,
2054  volume =       22,
2055  pages =        {1379--1387}
2056}
2057
2058@ARTICLE{Koch-Larrouy_al_CD10,
2059  author =       {A. Koch-Larrouy and M. Lengaigne and P. Terray and
2060                  G. Madec and S. Masson},
2061  title =        {Tidal mixing in the Indonesian Seas and its effect
2062                  on the tropical climate system},
2063  journal =      CD,
2064  year =         2010,
2065  volume =       34,
2066  number =       6,
2067  pages =        {891--904},
2068  doi =          {10.1007/s00382-009-0642-4},
2069}
2070
2071@ARTICLE{Koch-Larrouy_al_OD08b,
2072  author =       {A. Koch-Larrouy and G. Madec and B. Blanke and
2073                  R. Molcard},
2074  title =        {Water mass transformation along the Indonesian
2075                  throughflow in an OGCM},
2076  journal =      OD,
2077  year =         2008,
2078  volume =       58,
2079  number =       {3-4},
2080  pages =        {289--309},
2081  doi =          {10.1007/s10236-008-0155-4},
2082}
2083
2084@ARTICLE{Koch-Larrouy_al_GRL07,
2085  author =       {A. Koch-Larrouy and G. Madec and P. Bouruet-Aubertot
2086                  and T. Gerkema and L. Bessieres and R. Molcard},
2087  title =        {Tidal mixing in the Indonesian Seas and its effect
2088                  on the tropical climate system},
2089  journal =      GRL,
2090  year =         2007,
2091  volume =       34,
2092  pages =        {L04604},
2093  doi =          {10.1029/2006GL028405},
2094}
2095
2096@ARTICLE{Koch-Larrouy_al_OD08a,
2097  author =       {A. Koch-Larrouy and G. Madec and D. Iudicone and
2098                  A. Atmadipoera and R. Molcard},
2099  title =        {Physical processes contributing to the water mass
2100                  transformation of the Indonesian Throughflow},
2101  journal =      OD,
2102  year =         2008,
2103  volume =       58,
2104  number =       {3-4},
2105  pages =        {275--288},
2106  doi =          {10.1007/s10236-008-0154-5},
2107}
2108
2109@ARTICLE{Kolmogorov1942,
2110  author =       {A. N. Kolmogorov},
2111  title =        {The equation of turbulent motion in an
2112                  incompressible fluid},
2113  journal =      {Izv. Akad. Nauk SSSR, Ser. Fiz.},
2114  year =         1942,
2115  volume =       6,
2116  pages =        {56--58}
2117}
2118
2119@ARTICLE{Kondo1975,
2120  author =       {J. Kondo},
2121  title =        {Air-sea bulk transfer coefficients in diabatic
2122                  conditions},
2123  journal =      {Boundary-Layer Meteorol},
2124  year =         1975,
2125  volume =       9,
2126  pages =        {91--112}
2127}
2128
2129@article{Lemarie_OM2012,
2130  author =       "F. Lemari\'{e} and L. Debreu and A.F. Shchepetkin
2131                  and J.C. McWilliams",
2132  title =        "On the stability and accuracy of the harmonic and
2133                  biharmonic isoneutral mixing operators in ocean
2134                  models ",
2135  journal =      OM,
2136  year =         2012,
2137  volume =       "52–53",
2138  pages =        "9--35",
2139  issn =         "1463-5003",
2140  doi =          "http://dx.doi.org/10.1016/j.ocemod.2012.04.007",
2141}
2142
2143@ARTICLE{Lemarie_OM2015,
2144  author =       {F. Lemari\'{e} and L. Debreu and J. Demange and
2145                  G. Madec and J.M. Molines and M. Honnorat},
2146  title =        {Stability Constraints for Oceanic Numerical Models:
2147                  Implications for the Formulation of time and space
2148                  Discretizations},
2149  journal =      OM,
2150  year =         2015,
2151  volume =       92,
2152  pages =        {124--148},
2153  doi =          {10.1016/j.ocemod.2015.06.006},
2154}
2155
2156@ARTICLE{Lermusiaux2001,
2157  author =       {P. F. J. Lermusiaux},
2158  title =        {Evolving the subspace of three-dimensional
2159                  miltiscale ocean variability: Massachusetts Bay},
2160  journal =      JMS,
2161  year =         2001,
2162  volume =       29,
2163  pages =        {385--422}
2164}
2165
2166@PHDTHESIS{Levy_PhD96,
2167  author =       {M. L\'{e}vy},
2168  title =        {Mod\'{e}lisation des processus biog\'{e}ochimiques
2169                  en M\'{e}diterran\'{e}e nord-occidentale. Cycle
2170                  saisonnier et variabilit\'{e} m\'{e}so\'{e}chelle},
2171  school =       {Universit\'{e} Pierre et Marie Curie, Paris, France,
2172                  207pp},
2173  year =         1996
2174}
2175
2176@ARTICLE{Levy_al_GRL01,
2177  author =       {M. L\'{e}vy and A. Estubier and G Madec},
2178  title =        {Choice of an advection scheme for biogeochemical
2179                  models},
2180  journal =      GRL,
2181  year =         2001,
2182  volume =       28
2183}
2184
2185@ARTICLE{Levy_al_OM10,
2186  author =       {M. L\'{e}vy and P. Klein and A.-M. Tr\'{e}guier and
2187                  D. Iovino and G. Madec and S. Masson and
2188                  T. Takahashi},
2189  title =        {Impacts of sub-mesoscale physics on idealized gyres},
2190  journal =      OM,
2191  year =         2010,
2192  volume =       34,
2193  number =       {1-2},
2194  doi =          {10.1016/j.ocemod.2010.04.001},
2195}
2196
2197@ARTICLE{Levy_al_JMS99,
2198  author =       {M. L\'{e}vy and L. M\'{e}mery and G. Madec},
2199  title =        {The onset of a bloom after deep winter convection in
2200                  the Northwestern Mediterranean Sea: mesoscale
2201                  process study with a primitive equation model},
2202  journal =      JMS,
2203  year =         1999,
2204  volume =       16,
2205  number =       {1-2},
2206  pages =        {7--21}
2207}
2208
2209@ARTICLE{Levy_al_DSR98,
2210  author =       {M. L\'{e}vy and L. M\'{e}mery and G. Madec},
2211  title =        {The onset of the spring bloom in the MEDOC area:
2212                  mesoscale spatial variability},
2213  journal =      DSR,
2214  year =         1998,
2215  volume =       {I},
2216  number =       46,
2217  pages =        {1137--1160}
2218}
2219
2220@ARTICLE{Levy_al_DSR00,
2221  author =       {M. L\'{e}vy and L. M\'{e}mery and G. Madec},
2222  title =        {Combined effects of mesoscale processes and
2223                  atmospheric high-frequency variability on the spring
2224                  bloom in the MEDOC area},
2225  journal =      DSR,
2226  year =         2000,
2227  volume =       47,
2228  pages =        {527--531}
2229}
2230
2231@BOOK{Large_Yeager_Rep04,
2232  title =        {Diurnal to decadal global forcing for ocean and
2233                  sea-ice models: the data sets and flux
2234                  climatologies},
2235  publisher =    {NCAR Technical Note, NCAR/TN-460+STR, CGD Division
2236                  of the National Center for Atmospheric Research},
2237  year =         2004,
2238  author =       {W. G. Large and S. Yeager}
2239}
2240
2241@ARTICLE{Large_al_RG94,
2242  author =       {W. G. Large and J. C. McWilliams and S. C. Doney},
2243  title =        {Oceanic vertical mixing - a review and a model with
2244                  a nonlocal boundary layer parameterization},
2245  journal =      {Reviews of Geophysics},
2246  year =         1994,
2247  volume =       32,
2248  pages =        {363--404},
2249  doi =          {10.1029/94RG01872},
2250}
2251
2252@ARTICLE{Latif_al_JC06,
2253  author =       {M. Latif and C. Böning and J. Willebrand and
2254                  A. Biastoch and J. Dengg and N. Keenlyside and
2255                  U. Schweckendiek and G. Madec},
2256  title =        {Is the Thermohaline Circulation Changing?},
2257  journal =      JC,
2258  year =         2006,
2259  volume =       19,
2260  pages =        {4631--4637}
2261}
2262
2263@PHDTHESIS{Lazar_PhD97,
2264  author =       {A. Lazar},
2265  title =        {La branche froide de la circulation thermohaline -
2266                  sensibilit\'{e} \`{a} la diffusion turbulente dans
2267                  un mod\`{e}le de circulation g\'{e}n\'{e}rale
2268                  id\'{e}alis\'{e}e},
2269  school =       {Universit\'{e} Pierre et Marie Curie, Paris, France,
2270                  200pp},
2271  year =         1997
2272}
2273
2274@ARTICLE{Lazar_al_JPO99,
2275  author =       {A. Lazar and G. Madec and P. Delecluse},
2276  title =        {The Deep Interior Downwelling, the Veronis Effect,
2277                  and Mesoscale Tracer Transport Parameterizations in
2278                  an OGCM},
2279  journal =      JPO,
2280  year =         1999,
2281  volume =       29,
2282  number =       11,
2283  pages =        {2945--2961},
2284}
2285
2286@ARTICLE{Le_Sommer_al_OM09,
2287  author =       {J. {Le Sommer} and T. Penduff and S. Theetten and
2288                  G. Madec and B.  Barnier},
2289  title =        {How momentum advection schemes influence
2290                  current-topography interactions at eddy permitting
2291                  resolution},
2292  journal =      OM,
2293  year =         2009,
2294  volume =       29,
2295  number =       1,
2296  pages =        {1--14},
2297  doi =          {10.1016/j.ocemod.2008.11.007},
2298}
2299
2300@PHDTHESIS{Leclair_PhD2010,
2301  author =       {M. Leclair},
2302  title =        {introduction d'une coordonn\'{e}e verticale
2303                  arbitrairement Lagrangienne Eul\'{e}rienne dans le
2304                  code NEMO, 180pp.},
2305  school =       {Universit\'{e} Pierre and Marie Curie},
2306  year =         2010
2307}
2308
2309@ARTICLE{Leclair_Madec_OM09,
2310  author =       {M. Leclair and G. Madec},
2311  title =        {A conservative leap-frog time stepping method},
2312  journal =      OM,
2313  year =         2009,
2314  volume =       30,
2315  number =       {2-3},
2316  pages =        {88-94},
2317  doi =          {10.1016/j.ocemod.2009.06.006},
2318}
2319
2320@ARTICLE{Leclair_Madec_OM11,
2321  author =       {M. Leclair and G. Madec},
2322  title =        {$\tilde{z}$-coordinate, an Arbitrary
2323                  Lagrangian-Eulerian coordinate separating high and
2324                  low frequency},
2325  journal =      OM,
2326  year =         2011,
2327  volume =       37,
2328  pages =        {139--152},
2329  doi =          {10.1016/j.ocemod.2011.02.001},
2330}
2331
2332@ARTICLE{Lele_JCP1992,
2333  author =       {S.K. Lele},
2334  title =        {Compact finite difference schemes with spectral-like
2335                  resolution},
2336  journal =      JCP,
2337  year =         1992,
2338  volume =       103,
2339  pages =        {16--42}
2340}
2341
2342@ARTICLE{Lengaigne_al_JC03,
2343  author =       {M. Lengaigne and J.-P. Boulanger and C. Menkes and
2344                  G. Madec and P.  Delecluse and E. Guilyardi, and
2345                  J. Slingo},
2346  title =        {The March 1997 Westerly Wind Event and the onset of
2347                  the 1997/98 El Niño: Understanding the role of the
2348                  atmospheric},
2349  journal =      JC,
2350  year =         2003,
2351  volume =       16,
2352  number =       20,
2353  pages =        {3330--3343}
2354}
2355
2356@ARTICLE{Lengaigne_al_JGR02,
2357  author =       {M. Lengaigne and J.-P. Boulanger and C. Menkes and
2358                  S. Masson and G. Madec and P. Delecluse},
2359  title =        {Ocean response to the March 1997 Westerly Wind
2360                  Event},
2361  journal =      JGR,
2362  year =         2002,
2363  doi =          {10.1029/2001JC000841},
2364}
2365
2366@ARTICLE{Lengaigne_al_JGR03,
2367  author =       {M. Lengaigne and G. Madec and G. Alory and
2368                  C. Menkes},
2369  title =        {Sensitivity of the tropical Pacific Ocean to
2370                  isopycnal diffusion on tracer and dynamics},
2371  journal =      JGR,
2372  year =         2003,
2373  volume =       108,
2374  number =       {C11},
2375  pages =        3345,
2376  doi =          {10.1029/2002JC001704},
2377}
2378
2379@ARTICLE{Lengaigne_al_GRL09,
2380  author =       {M. Lengaigne and G. Madec and L. Bopp and C. Menkes
2381                  and O. Aumont and P. Cadule},
2382  title =        {Bio-physical feedbacks in the Arctic Ocean using an
2383                  Earth System model},
2384  journal =      GRL,
2385  year =         2009,
2386  volume =       36,
2387  pages =        {L21602},
2388  doi =          {10.1029/2009GL040145},
2389}
2390
2391@ARTICLE{Lengaigne_al_CD07,
2392  author =       {M. Lengaigne and C. Menkes and O. Aumont and
2393                  T. Gorgues and L. Bopp and J.-M. Andr\'{e} G. Madec},
2394  title =        {Bio-physical feedbacks on the tropical Pacific
2395                  climate in a Coupled General Circulation Model},
2396  journal =      CD,
2397  year =         2007,
2398  volume =       28,
2399  pages =        {503--516}
2400}
2401
2402@ARTICLE{Leonard1991,
2403  author =       {B. P. Leonard},
2404  title =        {The ULTIMATE conservative difference scheme applied
2405                  to unsteady one--dimensional advection},
2406  journal =      {Computer Methods in Applied Mechanics and
2407                  Engineering},
2408  year =         1991,
2409  pages =        {17--74}
2410}
2411
2412@TECHREPORT{Leonard_Rep88,
2413  author =       {B. P. Leonard},
2414  title =        {Universal limiter for transient interpolation
2415                  modelling of the advective transport equations},
2416  institution =  {Technical Memorandum TM-100916 ICOMP-88-11, NASA},
2417  year =         1988
2418}
2419
2420@ARTICLE{Leonard1979,
2421  author =       {B. P. Leonard},
2422  title =        {A stable and accurate convective modelling procedure
2423                  based on quadratic upstream interpolation},
2424  journal =      {Computer Methods in Applied Mechanics and
2425                  Engineering},
2426  year =         1979,
2427  volume =       19,
2428  pages =        {59--98},
2429}
2430
2431@TECHREPORT{Levier2007,
2432  author =       {B. Levier and A.-M. Tr\'{e}guier and G. Madec and
2433                  V. Garnier},
2434  title =        {Free surface and variable volume in the NEMO code},
2435  institution =  {MERSEA MERSEA IP report WP09-CNRS-STR-03-1A, 47pp,
2436                  available on the NEMO web site},
2437  year =         2007
2438}
2439
2440@BOOK{levitus82,
2441  title =        {Climatological Atlas of the world ocean},
2442  publisher =    {NOAA professional paper No. 13, 174pp},
2443  year =         1982,
2444  author =       {S Levitus },
2445  pages =        {173 pp}
2446}
2447
2448@ARTICLE{Li_al_OM2017
2449},
2450   AUTHOR = {Q Li and B Fox-Kemper and {\O} Breivik and A Webb},
2451   YEAR = {2017},
2452   TITLE = {Statistical Models of Global Langmuir Mixing},
2453   JOURNAL = {OM},
2454   VOLUME = {113},
2455   ISSUE = {May},
2456   PAGES = {95--114},
2457   DOI = {10.1016/j.ocemod.2017.03.016}
2458}
2459
2460@ARTICLE{Li_Garrett_JMR93,
2461  author =       {M. Li and C. Garrett},
2462  title =        {Cell merging and the jet/downwelling ratio in
2463                  Langmuir circulation},
2464  journal =      JMR,
2465  year =         1993,
2466  volume =       51,
2467  pages =        {737--769}
2468}
2469
2470@ARTICLE{Losch2008,
2471  author =       {M. Losch},
2472  title =        {Modeling ice shelf cavities in a z coordinate ocean
2473                  general circulation model},
2474  journal =      JGR,
2475  year =         2008,
2476  volume =       113,
2477  number =       {C13},
2478}
2479
2480@TECHREPORT{Lott1989,
2481  author =       {F. Lott and G. Madec},
2482  title =        {Implementation of bottom topography in the Ocean
2483                  General Circulation Model OPA of the LODYC:
2484                  formalism and experiments.},
2485  institution =  {LODYC, France, 36pp.},
2486  year =         1989,
2487  number =       3
2488}
2489
2490@ARTICLE{Lott_al_OM90,
2491  author =       {F. Lott and G. Madec and J. Verron},
2492  title =        {Topographic experiments in an Ocean General
2493                  Circulation Model},
2494  journal =      OM,
2495  year =         1990,
2496  volume =       88,
2497  pages =        {1--4}
2498}
2499
2500@ARTICLE{Luo_al_JC05,
2501  author =       {J.-J. Luo and S. Masson and E. Roeckner and G. Madec
2502                  and T. Yamagata},
2503  title =        {Reducing climatology bias in an ocean-atmosphere
2504                  CGCM with improved coupling physics},
2505  journal =      JC,
2506  year =         2005,
2507  volume =       18,
2508  number =       13,
2509  pages =        {2344--2360}
2510}
2511
2512@BOOK{Madec_Bk08,
2513  title =        {NEMO ocean engine},
2514  publisher =    {Note du P\^ole de mod\'{e}lisation, Institut
2515                  Pierre-Simon Laplace (IPSL), France, No 27, ISSN No
2516                  1288-1619},
2517  year =         2008,
2518  author =       {G. Madec}
2519}
2520
2521@BOOK{Madec_HDR01,
2522  title =        {Le Cycle des Masses d'Eau Oc\'{e}aniqueset sa
2523                  variabilit\'{e} dans le Syst\'{e}me Climatique},
2524  year =         2001,
2525  author =       {G. Madec},
2526  pages =        {63pp.},
2527  series =       {Habilitation \'{a} Diriger des Recherches,
2528                  Universit\'{e} Pierre et Marie Curie}
2529}
2530
2531@PHDTHESIS{Madec_PhD90,
2532  author =       {G. Madec},
2533  title =        {La formation d'eau profonde et son impact sur la
2534                  circulation r\'{e}gionale en M\'{e}diterran\'{e}e
2535                  Occidentale - une approche num\'{e}rique},
2536  school =       {Universit\'{e} Pierre et Marie Curie, Paris, France,
2537                  194pp.},
2538  year =         1990,
2539  month =        {2 mai}
2540}
2541
2542@ARTICLE{Madec_al_DAO91,
2543  author =       {G. Madec and M. Chartier and M. Cr\'{e}pon},
2544  title =        {Effect of thermohaline forcing variability on deep
2545                  water formation in the Northwestern Mediterranean
2546                  Sea - a high resulution three-dimensional study},
2547  journal =      DAO,
2548  year =         1991,
2549  volume =       15,
2550  pages =        {301--332}
2551}
2552
2553@ARTICLE{Madec_al_JPO91,
2554  author =       {G. Madec and M. Chartier and P. Delecluse and
2555                  M. Cr\'{e}pon},
2556  title =        {A three-dimensional numerical study of deep water
2557                  formation in the Northwestern Mediterranean Sea .},
2558  journal =      JPO,
2559  year =         1991,
2560  volume =       21,
2561  pages =        {1349--1371}
2562}
2563
2564@INBOOK{Madec_Crepon_Bk91,
2565  chapter =      {Thermohaline-driven deep water formation in the
2566                  Northwestern Mediterranean Sea},
2567  pages =        {241--265},
2568  title =        {Deep convection and deep water formation in the
2569                  oceans},
2570  publisher =    {Elsevier Oceanographic Series, P.C. Chu and
2571                  J.C. Gascard (Eds.)},
2572  year =         1991,
2573  author =       {G. Madec and M. Cr\'{e}pon}
2574}
2575
2576@ARTICLE{Madec1997,
2577  author =       {G. Madec and P. Delecluse},
2578  title =        {The OPA/ARPEGE and OPA/LMD Global Ocean-Atmosphere
2579                  Coupled Model},
2580  journal =      {Int. WOCE Newsletter},
2581  year =         1997,
2582  volume =       26,
2583  pages =        {12--15}
2584}
2585
2586@TECHREPORT{Madec1998,
2587  author =       {G. Madec and P. Delecluse and M. Imbard and C. Levy},
2588  title =        {OPA 8 Ocean General Circulation Model - Reference
2589                  Manual},
2590  institution =  {LODYC/IPSL Note 11},
2591  year =         1998
2592}
2593
2594@ARTICLE{Madec_Imbard_CD96,
2595  author =       {G Madec and M Imbard},
2596  title =        {A global ocean mesh to overcome the north pole
2597                  singularity},
2598  journal =      CD,
2599  year =         1996,
2600  volume =       12,
2601  pages =        {381--388}
2602}
2603
2604@ARTICLE{Madec_al_JPO96,
2605  author =       {G. Madec and F. Lott and P. Delecluse and
2606                  M. Cr\'{e}pon},
2607  title =        {Large-Scale Preconditioning of Deep-Water Formation
2608                  in the Northwestern Mediterranean Sea},
2609  journal =      JPO,
2610  year =         1996,
2611  volume =       26,
2612  number =       8,
2613  pages =        {1393--1408},
2614}
2615
2616@ARTICLE{Madec_al_OM88,
2617  author =       {G. Madec and C. Rahier and M. Chartier},
2618  title =        {A comparison of two-dimensional elliptic solvers for
2619                  the streamfunction in a multilevel OGCM},
2620  journal =      OM,
2621  year =         1988,
2622  volume =       78,
2623  pages =        {1-6}
2624}
2625
2626@ARTICLE{Maes_al_CD98,
2627  author =       {C. Maes and P. Delecluse and G. Madec},
2628  title =        {Impact of westerly wind bursts on the warm pool of
2629                  the TOGA-COARE domain in an OGCM},
2630  journal =      CD,
2631  year =         1998,
2632  volume =       14,
2633  pages =        {55--70}
2634}
2635
2636@ARTICLE{Maes_al_MWR97,
2637  author =       {C. Maes and G. Madec and P. Delecluse},
2638  title =        {Sensitivity of an Equatorial Pacific OGCM to the
2639                  lateral diffusion},
2640  journal =      MWR,
2641  year =         1997,
2642  volume =       125,
2643  number =       5,
2644  pages =        {958--971}
2645}
2646
2647@ARTICLE{Maggiore_al_PCE98,
2648  author =       {A. Maggiore and M. Zavatarelli and M. G. Angelucci
2649                  and N. Pinardi},
2650  title =        {Surface heat and water fluxes in the Adriatic Sea:
2651                  seasonal and interannual variability},
2652  journal =      {Phys Chem Earth},
2653  year =         1998,
2654  volume =       23,
2655  pages =        {561--567}
2656}
2657
2658@ARTICLE{Maltrud1998,
2659  author =       {M. E. Maltrud and R. D. Smith and A. J. Semtner and
2660                  R. C. Malone},
2661  title =        {Global eddy-resolving ocean simulations driven by
2662                  1985-1995 atmospheric winds},
2663  journal =      JGR,
2664  year =         1998,
2665  volume =       103,
2666  number =       {C13},
2667  pages =        {30,825--30,854}
2668}
2669
2670@ARTICLE{Marchesiello2001,
2671  author =       { P. Marchesiello and J. Mc Williams and
2672                  A. Shchepetkin },
2673  title =        {Open boundary conditions for long-term integrations
2674                  of Regional Oceanic Models},
2675  journal =      OM,
2676  year =         2001,
2677  volume =       3,
2678  pages =        {1--20}
2679}
2680
2681@ARTICLE{Marsaleix_al_OM08,
2682  author =       {P. Marsaleix and F. Auclair and J. W. Floor and
2683                  M. J. Herrmann and C. Estournel and I. Pairaud and
2684                  C. Ulses},
2685  title =        {Energy conservation issues in sigma-coordinate
2686                  free-surface ocean models},
2687  journal =      OM,
2688  year =         2008,
2689  volume =       20,
2690  number =       1,
2691  pages =        {61--89},
2692  doi =          {10.1016/j.ocemod.2007.07.005},
2693}
2694
2695@Article{Marsh_GMD2015,
2696  AUTHOR =       {R. Marsh and V. O. Ivchenko and N. Skliris and
2697                  S. Alderson and G. R. Bigg and G. Madec and
2698                  A. T. Blaker and Y. Aksenov and B. Sinha and
2699                  A. C. Coward and J. Le Sommer and N. Merino and
2700                  V. B. Zalesny},
2701  TITLE =        {NEMO-ICB (v1.0): interactive icebergs in the NEMO
2702                  ocean model globally configured at eddy-permitting
2703                  resolution},
2704  JOURNAL =      {Geoscientific Model Development},
2705  VOLUME =       8,
2706  YEAR =         2015,
2707  NUMBER =       5,
2708  PAGES =        {1547--1562},
2709  DOI =          {10.5194/gmd-8-1547-2015}
2710}
2711
2712@article{Martin_Adcroft_OM10,
2713  author =       {T. Martin and A. Adcroft},
2714  title =        {Parameterizing the fresh-water flux from land ice to
2715                  ocean with interactive icebergs in a coupled climate
2716                  model},
2717  journal =      OM,
2718  year =         2010,
2719  volume =       34,
2720  number =       {3--4},
2721  pages =        {111--124},
2722  issn =         {1463-5003},
2723  doi =          {10.1016/j.ocemod.2010.05.001},
2724}
2725
2726@BOOK{MIT-GCM_2004,
2727  title =        {MIT-gcm User Manual},
2728  year =         2004,
2729  editor =       {MIT Department of EAPS},
2730  author =       {J. Marshall and A. Adcroft and J.-M. Campin and
2731                  P. Heimbach and A.  Molod and S. Dutkiewicz and
2732                  H. Hill and M. Losch and B. Fox-Kemper and
2733                  D. Menemenlis and D. Ferreira and E. Hill and
2734                  M. Follows and C. Hill and C. Evangelinos and
2735                  G. Forget}
2736}
2737
2738@PHDTHESIS{Marti_PhD92,
2739  author =       {O. Marti},
2740  title =        {Etude de l'oc\'{e}an mondial : mod\'{e}lisation de
2741                  la circulation et du transport de traceurs
2742                  anthropog\'{e}niques},
2743  school =       {Universit\'{e} Pierre et Marie Curie, Paris, France,
2744                  201pp},
2745  year =         1992
2746}
2747
2748@ARTICLE{Marti_al_CD10,
2749  author =       {O. Marti and P. Braconnot and J.-L. Dufresne and
2750                  J. Bellier and R.  Benshila and S. Bony and
2751                  P. Brockmann and P. Cadule and A. Caubel and F
2752                  Codron and S. Denvil and L. Fairhead and T. Fichefet
2753                  and M.-A.  Filiberti and M.-A. Foujols and
2754                  P. Friedlingstein and H. Goosse and J.-Y. Grandpeix
2755                  and E. Guilyardi and F. Hourdin and G. Krinner and
2756                  C. L\'{e}vy and G. Madec and J. Mignot and I. Musat
2757                  and D. Swingedouw and C. Talandier},
2758  title =        {Key features of the IPSL ocean atmosphere model and
2759                  its sensitivity to atmospheric resolution},
2760  journal =      CD,
2761  year =         2010,
2762  volume =       34,
2763  number =       1,
2764  pages =        {1--26},
2765  doi =          {10.1007/s00382-009-0640-6},
2766}
2767
2768@ARTICLE{Marti_al_JGR92,
2769  author =       {O. Marti and G. Madec and P. Delecluse},
2770  title =        {Comment on "Net diffusivity in ocean general
2771                  circulation models with nonuniform grids" by
2772                  F. L. Yin and I. Y. Fung},
2773  journal =      JGR,
2774  year =         1992,
2775  volume =       97,
2776  pages =        {12,763--12,766}
2777}
2778
2779@INBOOK{Masson_al_Bk08,
2780  chapter =      {OPA9 - French experiments on the Earth Simulator and
2781                  Teraflop Workbench tunings},
2782  pages =        {25-34},
2783  title =        {In High Performance computing on Vector System 2007,
2784                  Stuttgart, Germany},
2785  publisher =    {Springer-Verlag},
2786  year =         2008,
2787  editor =       {Resch M, Roller S, Lammers P, Furui T, Galle M, Bez
2788                  W},
2789  author =       {S. Masson and M.-A. Foujols and P. Klein and
2790                  G. Madec and L. Hua and M. Levy and H. Sasaki and
2791                  K. Takahashi and F. Svensson},
2792  doi =          {10.1007/978-3-540-74384-2},
2793}
2794
2795@ARTICLE{Masson_al_GRL05,
2796  author =       {S. Masson and J.-J. Luo and G. Madec and J. Vialard
2797                  and F. Durand and S. Gualdi and E. Guilyardi and
2798                  S. Behera and P. Delecluse and A. Navarra and
2799                  T. Yamagata},
2800  title =        {Impact of barrier layer on winter-spring variability
2801                  of the South-Eastern Arabian Sea},
2802  journal =      GRL,
2803  year =         2005,
2804  volume =       32,
2805  pages =        {L07703},
2806  doi =          {10.1029/2004GL021980},
2807}
2808
2809@Article{Mathiot2017,
2810  AUTHOR =       {Mathiot, P. and Jenkins, A. and Harris, C. and Madec, G.},
2811  TITLE =        {Explicit representation and parametrised impacts of under ice shelf seas in the ${z}^{\ast}$ coordinate ocean model NEMO 3.6},
2812  JOURNAL =      {Geoscientific Model Development},
2813  VOLUME =       {10},
2814  YEAR =         {2017},
2815  NUMBER =       {7},
2816  PAGES =        {2849--2874},
2817  URL =          {https://www.geosci-model-dev.net/10/2849/2017/},
2818  DOI =          {10.5194/gmd-10-2849-2017}
2819}
2820
2821@ARTICLE{McDougall1987,
2822  author =       {T. J. McDougall},
2823  title =        {Neutral Surfaces},
2824  journal =      JPO,
2825  year =         1987,
2826  volume =       17,
2827  number =       11,
2828  pages =        {1950--1964},
2829}
2830
2831@ARTICLE{McDougall_Taylor_JMR84,
2832  author =       {T. J. McDougall and J. R. Taylor},
2833  title =        {Flux measurements across a finger interface at low
2834                  values of the stability ratio},
2835  journal =      JMR,
2836  year =         1984,
2837  volume =       42,
2838  pages =        {1--14}
2839}
2840
2841@ARTICLE{Mellor_Blumberg_JPO04,
2842  author =       {G. Mellor and A. Blumberg},
2843  title =        {Wave Breaking and Ocean Surface Layer Thermal
2844                  Response},
2845  journal =      JPO,
2846  volume =       34,
2847  number =       3,
2848  pages =        {693--698},
2849  year =         2004,
2850  doi =          {10.1175/2517.1},
2851}
2852
2853@ARTICLE{Mellor_Yamada_1982,
2854  author =       {G. L. Mellor and T. Yamada},
2855  title =        {Development of a turbulence closure model for
2856                  geophysical fluid problems},
2857  journal =      RGSP,
2858  year =         1982,
2859  volume =       20,
2860  pages =        {851--875}
2861}
2862
2863@ARTICLE{Menkes_al_JPO06,
2864  author =       {C. Menkes and J. Vialard and S C. Kennan and
2865                  J.-P. Boulanger and G. Madec},
2866  title =        {A modelling study of the three-dimensional heat
2867                  budget of Tropical Instability Waves in the
2868                  Equatorial Pacific},
2869  journal =      JPO,
2870  year =         2006,
2871  volume =       36,
2872  number =       5,
2873  pages =        {847--865}
2874}
2875
2876@ARTICLE{Merryfield1999,
2877  author =       {W. J. Merryfield and G. Holloway and A. E. Gargett},
2878  title =        {A Global Ocean Model with Double-Diffusive Mixing},
2879  journal =      JPO,
2880  year =         1999,
2881  volume =       29,
2882  number =       6,
2883  pages =        {1124--1142}
2884}
2885
2886@BOOK{Mesinger_Arakawa_Bk76,
2887  title =        {Numerical methods used in Atmospheric models},
2888  publisher =    {GARP Publication Series No 17},
2889  year =         1976,
2890  author =       {F. Mesinger and A. Arakawa}
2891}
2892
2893@ARTICLE{Morel_JGR88,
2894  author =       {A. Morel},
2895  title =        {Optical modeling of the upper ocean in relation to
2896                  its biogenous matter content (Case I waters)},
2897  journal =      JGR,
2898  year =         1988,
2899  volume =       93,
2900  pages =        {10,749--10,768}
2901}
2902
2903@ARTICLE{Morel_Berthon_LO89,
2904  author =       {A. Morel and J.-F. Berthon},
2905  title =        {Surface pigments, algal biomass profiles, and
2906                  potential production of the euphotic layer:
2907                  Relationships reinvestigated in view of
2908                  remote-sensing applications},
2909  journal =      {Limnol. Oceanogr.},
2910  year =         1989,
2911  volume =       {34(8)},
2912  pages =        {1545--1562}
2913}
2914
2915@ARTICLE{Morel_Maritorena_JGR01,
2916  author =       {A. Morel and S. Maritorena},
2917  title =        {Bio-optical properties of oceanic waters: a
2918                  reappraisal},
2919  journal =      JGR,
2920  year =         2001,
2921  volume =       106,
2922  number =       {C4},
2923  pages =        {7163--7180}
2924}
2925
2926@ARTICLE{Moun_al_JPO02,
2927  author =       {J.N. Moum and D.R. Caldwell and J.D. Nash and
2928                  G.D. Gunderson},
2929  title =        {Observations of boundary mixing over the continental
2930                  slope},
2931  journal =      JPO,
2932  year =         2002,
2933  volume =       32,
2934  number =       7,
2935  pages =        {2113--2130}
2936}
2937
2938@ARTICLE{Murray_JCP96,
2939  author =       {R. J. Murray},
2940  title =        {Explicit Generation of Orthogonal Grids for Ocean
2941                  Models},
2942  journal =      JCP,
2943  year =         1996,
2944  volume =       126,
2945  number =       2,
2946  pages =        {251--273},
2947}
2948
2949@ARTICLE{Oddo_al_OS09,
2950  author =       {P. Oddo and M. Adani and N. Pinardi and C. Fratianni
2951                  and M. Tonani and D. Pettenuzzo},
2952  title =        {A nested Atlantic-Mediterranean Sea general
2953                  circulation model for operational forecasting},
2954  journal =      OS,
2955  year =         2009,
2956  volume =       5,
2957  pages =        {1--13},
2958}
2959
2960@ARTICLE{Oey06,
2961   author =      {Lie-Yauw Oey},
2962   title =       {An OGCM with movable land-sea boundaries},
2963   journal =     {Ocean Modelling},
2964   volume =      "13",
2965   number =      "2",
2966   pages =       "176 - 195",
2967   year =        "2006",
2968   issn =        "1463-5003",
2969   doi =         "https://doi.org/10.1016/j.ocemod.2006.01.001",
2970   url =         "http://www.sciencedirect.com/science/article/pii/S1463500306000084",
2971}
2972
2973@PHDTHESIS{Olivier_PhD01,
2974  author =       {F. Olivier},
2975  title =        {Etude de l'activit\'{e} biologique et de la
2976                  circulation oc\'{e}anique dans un jet
2977                  g\'{e}ostrophique: le front Alm\'{e}ria-Oran},
2978  school =       {Universit\'{e} Pierre et Marie Curie, Paris, France},
2979  year =         2001
2980}
2981
2982@ARTICLE{Osborn_JPO80,
2983  author =       {T.R. Osborn},
2984  title =        {Estimates of the local rate of vertical diffusion
2985                  from dissipation measurements},
2986  journal =      JPO,
2987  year =         1980,
2988  volume =       10,
2989  pages =        {83--89}
2990}
2991
2992@ARTICLE{Pacanowski_Philander_JPO81,
2993  author =       {R.C. Pacanowski and S.G.H. Philander},
2994  title =        {Parameterization of Vertical Mixing in Numerical
2995                  Models of Tropical Oceans},
2996  journal =      JPO,
2997  year =         1981,
2998  volume =       11,
2999  number =       11,
3000  pages =        {1443--1451}
3001}
3002
3003@ARTICLE{Pacanowski_Gnanadesikan_MWR98,
3004  author =       {R. C. Pacanowski and A. Gnanadesikan},
3005  title =        {Transient response in a z-level ocean model that
3006                  resolves topography with partial-cells},
3007  journal =      MWR,
3008  year =         1998,
3009  volume =       126,
3010  pages =        {3248--3270}
3011}
3012
3013@ARTICLE{Park_al_JC09,
3014  author =       {W. Park and N. Keenlyside and M. Latif and
3015                  A. Str\¨{o}h and R. Redler and E. Roeckner and
3016                  G. Madec},
3017  title =        {Tropical Pacific Climate and its Response to Global
3018                  Warming in the Kiel Climate Model},
3019  journal =      JC,
3020  year =         2009,
3021  volume =       22,
3022  number =       1,
3023  pages =        {71--92},
3024  doi =          {10.1175/2008JCLI2261.1},
3025}
3026
3027@ARTICLE{Paulson1977,
3028  author =       {C. A. Paulson and J. J. Simpson},
3029  title =        {Irradiance Measurements in the Upper Ocean},
3030  journal =      JPO,
3031  year =         1977,
3032  volume =       7,
3033  number =       6,
3034  pages =        {952--956}
3035}
3036
3037@ARTICLE{Payne_JAS72,
3038  author =       {R. E. Payne},
3039  title =        {Albedo of the Sea Surface},
3040  journal =      JAS,
3041  year =         1972,
3042  volume =       29,
3043  pages =        {959--970}
3044}
3045
3046@ARTICLE{Penduff_al_OM06,
3047  author =       {T. Penduff and B. Barnier and J.-M. Molines and
3048                  G. Madec},
3049  title =        {On the use of current meter data to assess the
3050                  realism of ocean model simulations},
3051  journal =      OM,
3052  year =         2006,
3053  volume =       11,
3054  number =       {3--4},
3055  pages =        {399--416}
3056}
3057
3058@ARTICLE{Penduff_al_JGR00,
3059  author =       {T. Penduff and B. Barnier and A. Colin de
3060                  Verdi\`{e}re},
3061  title =        {Self-adapting open boundaries for a regional model
3062                  of the eastern North Atlantic},
3063  journal =      JGR,
3064  year =         2000,
3065  volume =       105,
3066  pages =        {11,279--11,297}
3067}
3068
3069@ARTICLE{Penduff_al_OS07,
3070  author =       {T. Penduff and J. Le Sommer and B. Barnier and
3071                  A.M. Treguier and J. Molines and G. Madec},
3072  title =        {Influence of numerical schemes on current-topography
3073                  interactions in 1/4$^{\circ}$ global ocean
3074                  simulations},
3075  journal =      OS,
3076  year =         2007,
3077  volume =       3,
3078  pages =        {509--524}
3079}
3080
3081@ARTICLE{Phillips1959,
3082  author =       {R. S. Phillips},
3083  title =        {Dissipative Operators and Hyperbolic Systems of
3084                  Partial Differential Equations},
3085  journal =      {Transactions of the American Mathematical Society},
3086  year =         1959,
3087  volume =       90,
3088  number =       2,
3089  pages =        {193--254},
3090  doi =          {10.2307/1993202},
3091}
3092
3093@ARTICLE{Le_Quere_al_GBC00,
3094  author =       {C. Le Qu\'{e}r\'{e} and J. C. Orr and P. Monfray and
3095                  O. Aumont and G. Madec},
3096  title =        {Interannual variability of the global and regional
3097                  sea-air flux of C02 from 1979 to 1993},
3098  journal =      GBC,
3099  year =         2000,
3100  volume =       14,
3101  pages =        {1247--1266}
3102}
3103
3104@ARTICLE{Raynaud_al_GRL00,
3105  author =       {S. Raynaud and S. Speich and E. Guilyardi and
3106                  G. Madec},
3107  title =        {Impact of the ocean lateral diffusion on the
3108                  ENSO-like variability of a global coupled GCM},
3109  journal =      GRL,
3110  year =         2000,
3111  volume =       27,
3112  number =       19,
3113  pages =        {3041--3044}
3114}
3115
3116@ARTICLE{Redi_JPO82,
3117  author =       {M. H. Redi},
3118  title =        {Oceanic isopycnal mixing by coordinate rotation},
3119  journal =      JPO,
3120  year =         1982,
3121  volume =       13,
3122  pages =        {1154--1158}
3123}
3124
3125@ARTICLE{Reed_JPO77,
3126  author =       {R. K. Reed},
3127  title =        {On estimating insolation over the ocean},
3128  journal =      JPO,
3129  year =         1977,
3130  volume =       1,
3131  pages =        {874--971}
3132}
3133
3134@ARTICLE{Reverdin1991,
3135  author =       {G. Reverdin and P. Delecluse and C. L\'{e}vy and
3136                  P. Andrich and A. Morli\`{e}re and J. M. Verstraete},
3137  title =        {The near surface tropical Atlantic in 1982-1984 :
3138                  results from a numerical simulation and a data
3139                  analysis},
3140  journal =      PO,
3141  year =         1991,
3142  volume =       27,
3143  pages =        {273--340}
3144}
3145
3146@BOOK{Richtmyer1967,
3147  title =        {Difference methods for initial-value problems},
3148  publisher =    {Interscience Publisher, Second Edition},
3149  year =         1967,
3150  author =       {R. D. Richtmyer and K. W. Morton},
3151  pages =        {405pp}
3152}
3153
3154@ARTICLE{Robert_JMSJ66,
3155  author =       {A. J. Robert},
3156  title =        {The integration of a Low order spectral form of the
3157                  primitive meteorological equations},
3158  journal =      JMSJ,
3159  year =         1966,
3160  volume =       44,
3161  number =       2
3162}
3163
3164@ARTICLE{Rodgers_al_GRL04,
3165  author =       {K. Rodgers and O. Aumont and G. Madec and C. Menkes},
3166  title =        {Radiocarbon as a thermocline proxy for the eastern
3167                  equatorial Pacific},
3168  journal =      GRL,
3169  year =         2004,
3170  volume =       31,
3171  pages =        {L14314},
3172  doi =          {10.1029/2004GL019764},
3173}
3174
3175@ARTICLE{Rodgers_al_GRL03,
3176  author =       {K. Rodgers and B. Blanke and G. Madec and O. Aumont
3177                  and P. Ciais and J.-C. Dutay},
3178  title =        {Extratropical sources of equatorial pacific
3179                  upwelling in an OGCM},
3180  journal =      GRL,
3181  year =         2003,
3182  volume =       30,
3183  number =       2,
3184  doi =          {10.1029/2002GL016003},
3185}
3186
3187@Article{Rodgers_2014,
3188  AUTHOR =       {Rodgers, K. B. and Aumont, O. and Mikaloff Fletcher,
3189                  S. E. and Plancherel, Y. and Bopp, L. and de Boyer
3190                  Mont\'egut, C. and Iudicone, D. and Keeling,
3191                  R. F. and Madec, G. and Wanninkhof, R.},
3192  TITLE =        {Strong sensitivity of Southern Ocean carbon uptake
3193                  and nutrient cycling to wind stirring},
3194  JOURNAL =      {Biogeosciences},
3195  VOLUME =       11,
3196  YEAR =         2014,
3197  NUMBER =       15,
3198  PAGES =        {4077--4098},
3199  DOI =          {10.5194/bg-11-4077-2014}
3200}
3201
3202@ARTICLE{Rodi_1987,
3203  author =       {W. Rodi},
3204  title =        {Examples of calculation methods for flow and mixing
3205                  in stratified fluids},
3206  journal =      JGR,
3207  year =         1987,
3208  volume =       92,
3209  number =       {C5},
3210  pages =        {5305--5328}
3211}
3212
3213@INCOLLECTION{Roed1986,
3214  author =       {L.P. Roed and C.K. Cooper},
3215  title =        {Open boundary conditions in numerical ocean models},
3216  booktitle =    {Advanced Physical Oceanography Numerical Modelling},
3217  publisher =    { NATO ASI Series, vol. 186.},
3218  year =         1986,
3219  editor =       {J.J. O'Brien}
3220}
3221
3222@article{Roquet_OM2015,
3223  author =       "F. Roquet and G. Madec and T.J. McDougall and
3224                  P.M. Barker",
3225  title =        "Accurate polynomial expressions for the density and
3226                  specific volume of seawater using the TEOS-10
3227                  standard ",
3228  journal =      OM,
3229  volume =       90,
3230  pages =        "29--43",
3231  year =         2015,
3232  issn =         "1463-5003",
3233  doi =          "10.1016/j.ocemod.2015.04.002",
3234}
3235
3236@article{Roquet_JPO2015,
3237  author =       "F. Roquet and G. Madec and L. Brodeau and
3238                  J. Nycander",
3239  title =        "Defining a Simplified Yet Realistic Equation of
3240                  State for Seawater",
3241  journal =      JPO,
3242  volume =       45,
3243  pages =        "2564--2579",
3244  year =         2015,
3245  doi =          "10.1175/JPO-D-15-0080.1",
3246}
3247
3248@ARTICLE{Roullet_Madec_JGR00,
3249  author =       {G. Roullet and G. Madec},
3250  title =        {salt conservation, free surface, and varying levels:
3251                  a new formulation for ocean general circulation
3252                  models},
3253  journal =      JGR,
3254  year =         2000,
3255  volume =       105,
3256  pages =        {23,927--23,942}
3257}
3258
3259@ARTICLE{Rousset_GMD2015,
3260  author =       {C. Rousset and M. Vancoppenolle and G. Madec and
3261                  T. Fichefet and S. Flavoni and A. Barth\'{e}lemy and
3262                  R. Benshila and J. Chanut and C. L\'{e}vy and
3263                  S. Masson and F. Vivier },
3264  title =        {The Louvain-La-Neuve sea-ice model LIM3.6: Global
3265                  and regional capabilities},
3266  journal =      {Geoscientific Model Development},
3267  year =         2015,
3268  volume =       8,
3269  pages =        {2991--3005},
3270  doi =          {10.5194/gmd-8-2991-2015},
3271}
3272
3273@ARTICLE{Sadourny1975,
3274  author =       {R. Sadourny},
3275  title =        {The Dynamics of Finite-Difference Models of the
3276                  Shallow-Water Equations},
3277  journal =      JAS,
3278  year =         1975,
3279  volume =       32,
3280  number =       4,
3281  pages =        {680--689},
3282}
3283
3284@ARTICLE{Sarmiento1982,
3285  author =       {J. L. Sarmiento and K. Bryan},
3286  title =        {Ocean transport model for the North Atlantic},
3287  journal =      JGR,
3288  year =         1982,
3289  volume =       87,
3290  pages =        {394--409}
3291}
3292
3293@ARTICLE{Saunders_JAS82,
3294  author =       {P. M. Saunders},
3295  title =        {{The Temperature at the Ocean-air Interface}},
3296  journal =      JAS,
3297  year =         1967,
3298  volume =       24,
3299  pages =        {269-273},
3300  doi =          {10.1175/1520-0469(1967)024<0269:TTATOA>2.0.CO;2},
3301}
3302
3303@BOOK{Shchepetkin_McWilliams_Bk08,
3304  author =       {A. F. Shchepetkin and J. C. McWilliams},
3305  title =        {Handbook of Numerical Analysis, Vol. XIV:
3306                  Computational Methods for the Ocean and the
3307                  Atmosphere, pp 121-183},
3308  publisher =    {P. G. Ciarlet, editor, R. Temam and J. Tribbia,
3309                  guest eds., Elsevier Science},
3310  year =         2008,
3311  pages =        784
3312}
3313
3314@ARTICLE{Shchepetkin_McWilliams_OM05,
3315  author =       {A. F. Shchepetkin and J. C. McWilliams},
3316  title =        {The regional oceanic modeling system (ROMS) - a
3317                  split-explicit, free-surface,
3318                  topography-following-coordinate oceanic modelr},
3319  journal =      OM,
3320  year =         2005,
3321  volume =       9,
3322  number =       4,
3323  pages =        {347--404}
3324}
3325
3326@ARTICLE{Sacha2003,
3327  author =       {A. F. Shchepetkin and J. C. McWilliams},
3328  title =        {A method for computing horizontal pressure-gradient
3329                  force in an oceanic model with a nonaligned vertical
3330                  coordinate},
3331  journal =      JGR,
3332  year =         2003,
3333  volume =       108,
3334  number =       {C3},
3335  pages =        3090,
3336  doi =          {10.1029/2001JC001047},
3337}
3338
3339@ARTICLE{Shchepetkin1996,
3340  author =       {A. F. Shchepetkin and J. J. O'Brien},
3341  title =        {A Physically Consistent Formulation of Lateral
3342                  Friction in Shallow-Water Equation Ocean Models},
3343  journal =      MWR,
3344  year =         1996,
3345  volume =       124,
3346  number =       6,
3347  pages =        {1285--1300}
3348}
3349
3350@ARTICLE{Siddorn_Furner_OM12,
3351  author =       {J. Siddorn and R. Furner},
3352  title =        {An analytical stretching function that combines the
3353                  best attributes of geopotential and
3354                  terrain-following vertical coordinates},
3355  journal =      OM,
3356  year =         2012,
3357  pages =        {submitted},
3358}
3359
3360@ARTICLE{Simmons_al_OM04,
3361  author =       {H. L. Simmons and S. R. Jayne and
3362                  L. C. {St. Laurent} and A. J. Weaver},
3363  title =        {Tidally driven mixing in a numerical model of the
3364                  ocean general circulation},
3365  journal =      OM,
3366  year =         2004,
3367  pages =        {245--263},
3368}
3369
3370@INBOOK{Smagorinsky_93,
3371  author =       {Smagorinsky, J.},
3372  chapter =      {Some historical remarks on the use of non-linear
3373                  viscosities},
3374  title =        {Large Eddy Simulation of Complex Engineering and
3375                  Geophysical Flows},
3376  pages =        {3--36},
3377  year =         1993,
3378  publisher =    {Cambridge University Press, B. Galperin and
3379                  S. A. Orszag (eds.)},
3380}
3381
3382@ARTICLE{Song_Haidvogel_JCP94,
3383  author =       {Y. Song and D. Haidvogel},
3384  title =        {A semi-implicit ocean circulation model using a
3385                  generalized topography-following coordinate system},
3386  journal =      JCP,
3387  year =         1994,
3388  volume =       115,
3389  number =       1,
3390  pages =        {228--244}
3391}
3392
3393@ARTICLE{Song1998,
3394  author =       {Y. T. Song},
3395  title =        {A General Pressure Gradient Formulation for Ocean
3396                  Models. Part I: Scheme Design and Diagnostic
3397                  Analysis},
3398  journal =      MWR,
3399  year =         1998,
3400  volume =       126,
3401  number =       12,
3402  pages =        {3213--3230}
3403}
3404
3405@ARTICLE{SongWright1998,
3406  author =       {Y. T. Song and D. G. Wright},
3407  title =        {A General Pressure Gradient Formulation for Ocean
3408                  Models.  Part II: Energy, Momentum, and Bottom
3409                  Torque Consistency},
3410  journal =      MWR,
3411  year =         1998,
3412  volume =       126,
3413  number =       12,
3414  pages =        {3231--3247}
3415}
3416
3417@ARTICLE{Speer_al_Tel00,
3418  author =       {K. Speer and E. Guilyardi and G. Madec},
3419  title =        {Southern Ocean transformation in a coupled model
3420                  with and without eddy mass fluxes},
3421  journal =      {Tellus},
3422  year =         2000,
3423  volume =       {52A},
3424  number =       5,
3425  pages =        {554--565}
3426}
3427
3428@PHDTHESIS{Speich_PhD92,
3429  author =       {S. Speich},
3430  title =        {Etude du for\c{c}age de la circulation
3431                  g\'{e}n\'{e}rale oc\'{e}anique par les d\'{e}troits
3432                  - cas de la mer d'Alboran},
3433  school =       {Universit\'{e} Pierre et Marie Curie, Paris, France},
3434  year =         1992
3435}
3436
3437@ARTICLE{Speich_al_GRL01,
3438  author =       {S. Speich and B. Blanke and G. Madec},
3439  title =        {Warm and cold water paths of an OGCM thermohaline
3440                  conveyor belt},
3441  journal =      GRL,
3442  year =         2001,
3443  volume =       28,
3444  number =       2,
3445  pages =        {311--314}
3446}
3447
3448@ARTICLE{Speich_al_JPO96,
3449  author =       {S. Speich and G. Madec and M. Cr\'{e}pon},
3450  title =        {The circulation in the Alboran Sea - a sensitivity
3451                  study},
3452  journal =      JPO,
3453  year =         1996,
3454  volume =       26,
3455  number =       3,
3456  pages =        {320--340}
3457}
3458
3459@ARTICLE{St_Laurent_Garrett_JPO02,
3460  author =       {L.C. {St. Laurent} and C. Garrett},
3461  title =        {The role of internal tides in mixing the deep ocean},
3462  journal =      JPO,
3463  pages =        {2882--2899}
3464}
3465
3466@ARTICLE{St_Laurent_Nash_DSR04,
3467  author =       {L.C. {St. Laurent} and J. D. Nash},
3468  title =        {An examination of the radiative and dissipative
3469                  properties of deep ocean internal tides},
3470  journal =      DSR,
3471  year =         2004,
3472  volume =       {II},
3473  number =       51,
3474  pages =        {3029--3042},
3475  doi =          {10.1016/j.dsr2.2004.09.008},
3476}
3477
3478@ARTICLE{St_Laurent_al_GRL02,
3479  author =       {L.C. {St. Laurent} and H.L. Simmons and S.R. Jayne},
3480  title =        {Estimating tidally driven mixing in the deep ocean},
3481  journal =      GRL,
3482  year =         2002,
3483  volume =       29,
3484  pages =        2106,
3485  doi =          {10.1029/2002GL015633},
3486}
3487
3488@ARTICLE{Stacey_JPO99,
3489  author =       {M. W. Stacey},
3490  title =        {Simulations of the wind-forced near-surface
3491                  circulation in Knight Inlet: A parameterization of
3492                  the roughness length},
3493  journal =      JPO,
3494  year =         1999,
3495  volume =       29,
3496  pages =        {1363--1367},
3497}
3498
3499@ARTICLE{Steele2001,
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3511  author =       {C. A. Stein and S. Stein},
3512  title =        {A model for the global variation in oceanic depth
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3522  title =        {On the theory of oscillatory waves},
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3604  pages =        {22,115--22,129}
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3607@ARTICLE{Treguier_al_DSR03,
3608  author =       {A.-M. Tr\'{e}guier and O. Boedel and B. Barnier and
3609                  G. Madec},
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3614}
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3628                  S. R. Rintoul and G. Madec and J. Le Sommer and
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3639@ARTICLE{Treguier_al_OD06,
3640  author =       {A.-M. Tr\'{e}guier and C. Gourcuff and P. Lherminier
3641                  and H. Mercier and B. Barnier and G. Madec and
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3643                  C. Böning},
3644  title =        {Internal and forced variability along a section
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3652}
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3688  author =       {L. Umlauf and H. Burchard},
3689  title =        {Second-order turbulence closure models for
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3699  title =        {Algorithms for computation of fundamental property
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3703  author =       {UNESCO}
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3707  author =       {S. Valcke},
3708  title =        {OASIS3 User Guide (prism\_2-5)},
3709  institution =  {PRISM Support Initiative Report No 3, CERFACS,
3710                  Toulouse, France},
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3713}
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3716  author =       {S. Valcke and L. Terray and A. Piacentini },
3717  title =        {The OASIS Coupled User Guide Version 2.4},
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3724  author =       {M. Vancoppenolle and T. Fichefet and H. Goosse},
3725  title =        {Simulating the mass balance and salinity of Arctic
3726                  and Antarctic sea ice. 2.  Importance of sea ice
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3732}
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3734@book{Vallis06,
3735  author =       {Vallis, G. K.},
3736  title =        {Atmospheric and Oceanic Fluid Dynamics},
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3744  author =       {M. Vancoppenolle and T. Fichefet and H. Goosse and
3745                  S. Bouillon and G. Madec and M. A. Morales Maqueda},
3746  title =        {Simulating the mass balance and salinity of Arctic
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3748                  validation},
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3771  author =       {J. C. Warner and C. R. Sherwood and H. G. Arango and
3772                  R. P. Signell},
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3778  pages =        {81--113},
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3780}
3781
3782@ARTICLE{WarnerEtal13,
3783   author =      {John C. Warner and Zafer Defne and Kevin Haas and
3784                  Hernan G. Arango},
3785   title =       {A wetting and drying scheme for ROMS},
3786   journal =     "Computers \& Geosciences",
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3789   year =        "2013",
3790   issn =        "0098-3004",
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3792   url =         "http://www.sciencedirect.com/science/article/pii/S0098300413001362",
3793}
3794
3795@ARTICLE{Weatherly_JMR84,
3796  author =       {G. L. Weatherly},
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3807  author =       {A. J. Weaver and M. Eby},
3808  title =        {On the numerical implementation of advection schemes
3809                  for use in conjuction with various mixing
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3813  volume =       27
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3838  author =       {D. C. Wilcox},
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3849  author =       {J. Willebrand and B. Barnier and C. Boning and
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3862  author =       {P.D. Williams and E. Guilyardi and G. Madec and
3863                  S. Gualdi and E. Scoccimarro},
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3873@ARTICLE{Williams_al_GRL07,
3874  author =       {P.D. Williams and E. Guilyardi and R. Sutton and
3875                  J.M. Gregory and G. Madec},
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3885@ARTICLE{Williams_al_CD06,
3886  author =       {P.D. Williams and E. Guilyardi and R. Sutton and
3887                  J.M. Gregory and G. Madec},
3888  title =        {On the climate response of the low-latitude Pacific
3889                  ocean to changes in the global freshwater cycle},
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3896@ARTICLE{Zalesak_JCP79,
3897  author =       {S. T. Zalesak},
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3906  author =       {Zhang, R.-H. and Endoh, M.},
3907  title =        {A free surface general circulation model for the
3908                  tropical Pacific Ocean},
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