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sette.sh in branches/2014/dev_r4650_UKMO14.11_SETTE_OBSASM/NEMOGCM/SETTE – NEMO

source: branches/2014/dev_r4650_UKMO14.11_SETTE_OBSASM/NEMOGCM/SETTE/sette.sh @ 4781

Last change on this file since 4781 was 4781, checked in by djlea, 10 years ago

Remove redundant error check preventing background write and increments being applied in the same run. Switch to use ctl_stop in diaobs. Fix to jul2greg to deal properly with negative julian dates. Tidying obs_write. Restore agrif sette test.

  • Property svn:executable set to *
File size: 37.3 KB
Line 
1#!/bin/bash
2############################################################
3# Author : Simona Flavoni for NEMO
4# Contact: sflod@locean-ipsl.upmc.fr
5# 2013   : A.C. Coward added options for testing with XIOS in dettached mode
6#
7# sette.sh   : principal script of SET TEsts for NEMO (SETTE)
8# ----------------------------------------------------------------------
9# NEMO/SETTE , NEMO Consortium (2010)
10# Software governed by the CeCILL licence     (NEMOGCM/NEMO_CeCILL.txt)
11# ----------------------------------------------------------------------
12#
13#############################################################
14#set -x
15set -o posix
16#set -u
17#set -e
18# ===========
19# DESCRIPTION
20# ===========
21#
22# Variables to be checked by user:
23#
24# COMPILER          : name of compiler as defined in NEMOGCM/ARCH directory
25# BATCH_COMMAND_PAR :  name of the command for submitting parallel batch jobs
26# BATCH_COMMAND_SEQ :  name of the command for submitting sequential batch jobs 
27# INTERACT_FLAG     : flag to run in interactive mode "yes"
28#                           to run in batch mode "no"
29# MPIRUN_FLAG       : flag to run in parallel (MPI) "yes"
30#                           to run in sequential mode (NB_PROC = 1) "no"
31# USING_XIOS        : flag to control the activation of key_iomput
32#                      "yes" to compile using key_iomput and link to the external XIOS library
33#                      "no"  to compile without key_iomput and link to the old IOIPSL library
34# USING_MPMD        : flag to control the use of stand-alone IO servers
35#                     requires USING_XIOS="yes"
36#                      "yes" to run in MPMD (detached) mode with stand-alone IO servers
37#                      "no"  to run in SPMD (attached) mode without separate IO servers
38# NUM_XIOSERVERS    : number of stand-alone IO servers to employ
39#                     set to zero if USING_MPMD="no"
40#
41# Principal script is sette.sh, that calls
42#
43#  makenemo  : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
44#              and links to opa in ${CONFIG_NAME}/EXP00)
45#
46#  param.cfg : sets and loads following directories:
47#
48#   FORCING_DIR         : is the directory for forcing files (tarfile)
49#   INPUT_DIR           : is the directory for input files storing
50#   TMPDIR              : is the temporary directory (if needed)
51#   NEMO_VALIDATION_DIR : is the validation directory
52#
53#   (NOTE: this file is the same for all configrations to be tested with sette)
54#
55#   all_functions.sh : loads functions used by sette (note: new functions can be added here)
56#   set_namelist     : function declared in all_functions that sets namelist parameters
57#   post_test_tidyup : creates validation storage directory and copies required output files
58#                      (solver.stat and ocean.output) in it after execution of test.
59#
60#  VALIDATION tree is:
61#
62#   NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
63#
64#  prepare_exe_dir.sh : defines and creates directory where the test is executed
65#                       execution directory takes name of TEST_NAME defined for every test
66#                       in sette.sh. (each test in executed in its own directory)
67#
68#  prepare_job.sh     : to generate the script run_job.sh
69#
70#  fcm_job.sh         : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
71#                        see sette.sh and BATCH_TEMPLATE directory
72#
73#  NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
74#        can be found paths to the input tar file)
75#  NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
76#        directory
77#  NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
78#        remain in ${NEW_CONF}/EXP00
79#
80#  NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
81#        executed commands
82#
83#  NOTE: if sette.sh is stopped in output.sette there is written the last command
84#        executed by sette.sh
85#
86# example use: ./sette.sh
87#########################################################################################
88#
89# Compiler among those in NEMOGCM/ARCH
90COMPILER=tobedefined
91export BATCH_COMMAND_PAR="llsubmit"
92export BATCH_COMMAND_SEQ=$BATCH_COMMAND_PAR
93export INTERACT_FLAG="yes"
94export MPIRUN_FLAG="yes"
95export USING_XIOS="yes"
96#
97export DEL_KEYS="key_iomput"
98if [ ${USING_XIOS} == "yes" ] 
99 then
100   export DEL_KEYS=""
101fi
102#
103# Settings which control the use of stand alone servers (only relevant if using xios)
104#
105export USING_MPMD="no"
106export NUM_XIOSERVERS=4
107export JOB_PREFIX=batch-mpmd
108#
109if [ ${USING_MPMD} == "no" ] 
110 then
111   export NUM_XIOSERVERS=0
112   export JOB_PREFIX=batch
113fi
114#
115#
116if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no"]
117 then
118   echo "Incompatible choices. MPMD mode requires the XIOS server"
119   exit
120fi
121#
122
123# Directory to run the tests
124SETTE_DIR=$(cd $(dirname "$0"); pwd)
125MAIN_DIR=${SETTE_DIR%/SETTE}
126CONFIG_DIR=${MAIN_DIR}/CONFIG
127TOOLS_DIR=${MAIN_DIR}/TOOLS
128COMPIL_DIR=${TOOLS_DIR}/COMPILE
129
130CMP_NAM=${1:-$COMPILER}
131# Copy job_batch_COMPILER file for specific compiler into job_batch_template
132cd ${SETTE_DIR}
133cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template || exit
134# Description of configuration tested:
135# GYRE            : 1 &  2
136# ORCA2_LIM_PISCES: 3 &  4
137# ORCA2_OFF_PISCES: 5 &  6
138# AMM12           : 7 &  8
139# SAS             : 9 & 10
140# ORCA2_LIM_OBS:   11
141# ORCA2_AGRIF_LIM: 12
142for config in 1 2 3 4 5 6 7 8 9 10 11 12
143
144do
145
146# TESTS FOR GYRE CONFIGURATION
147if [ ${config} -eq 1 ] ;  then
148    ## Restartability tests for GYRE
149    export TEST_NAME="LONG"
150    cd ${CONFIG_DIR}
151    . ./makenemo -m ${CMP_NAM} -n GYRE_LONG -r GYRE -j 8 del_key ${DEL_KEYS}
152    cd ${SETTE_DIR}
153    . ./param.cfg
154    . ./all_functions.sh
155    . ./prepare_exe_dir.sh
156    JOB_FILE=${EXE_DIR}/run_job.sh
157    NPROC=4
158    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
159    cd ${EXE_DIR} 
160    set_namelist namelist_cfg cn_exp \"GYRE_LONG\"
161    set_namelist namelist_cfg nn_it000 1
162    set_namelist namelist_cfg nn_itend 120
163    set_namelist namelist_cfg nn_stock 60
164    set_namelist namelist_cfg ln_clobber .true.
165    set_namelist namelist_cfg nn_fwb 0
166    set_namelist namelist_cfg nn_solv 2
167    set_namelist namelist_cfg jpni 2
168    set_namelist namelist_cfg jpnj 2
169    set_namelist namelist_cfg jpnij 4
170    if [ ${USING_MPMD} == "yes" ] ; then
171       set_xio_using_server iodef.xml true
172    else
173       set_xio_using_server iodef.xml false
174    fi
175    cd ${SETTE_DIR}
176    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
177
178    cd ${SETTE_DIR}
179    export TEST_NAME="SHORT"
180    . ./prepare_exe_dir.sh
181    cd ${EXE_DIR}
182    set_namelist namelist_cfg cn_exp \"GYRE_SHORT\"
183    set_namelist namelist_cfg nn_it000 61
184    set_namelist namelist_cfg nn_itend 120
185    set_namelist namelist_cfg nn_stock 60
186    set_namelist namelist_cfg ln_rstart .true.
187    set_namelist namelist_cfg nn_rstctl 2
188    set_namelist namelist_cfg ln_clobber .true.
189    set_namelist namelist_cfg nn_fwb 0
190    set_namelist namelist_cfg nn_solv 2
191    set_namelist namelist_cfg jpni 2
192    set_namelist namelist_cfg jpnj 2
193    set_namelist namelist_cfg jpnij 4
194    set_namelist namelist_cfg cn_ocerst_in \"GYRE_LONG_00000060_restart\"
195    if [ ${USING_MPMD} == "yes" ] ; then
196       set_xio_using_server iodef.xml true
197    else
198       set_xio_using_server iodef.xml false
199    fi
200    for (( i=1; i<=$NPROC; i++)) ; do
201        L_NPROC=$(( $i - 1 ))
202        L_NPROC=`printf "%04d\n" ${L_NPROC}`
203        ln -sf ../LONG/GYRE_LONG_00000060_restart_${L_NPROC}.nc .
204    done
205    if [ ${USING_MPMD} == "yes" ] ; then
206       set_xio_using_server iodef.xml true
207    else
208       set_xio_using_server iodef.xml false
209    fi
210    cd ${SETTE_DIR}
211    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
212    cd ${SETTE_DIR}
213    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
214fi
215
216if [ ${config} -eq 2 ] ;  then
217    ## Reproducibility tests for GYRE
218    export TEST_NAME="REPRO_1_4"
219    cd ${CONFIG_DIR}
220    . ./makenemo -m ${CMP_NAM} -n GYRE_4 -r GYRE -j 8 add_key "key_mpp_rep" del_key ${DEL_KEYS}
221    cd ${SETTE_DIR}
222    . ./param.cfg
223    . ./all_functions.sh
224    . ./prepare_exe_dir.sh
225    JOB_FILE=${EXE_DIR}/run_job.sh
226    NPROC=4
227    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
228    cd ${EXE_DIR}
229    set_namelist namelist_cfg cn_exp \"GYRE_14\"
230    set_namelist namelist_cfg nn_it000 1
231    set_namelist namelist_cfg nn_itend 60
232    set_namelist namelist_cfg nn_fwb 0
233    set_namelist namelist_cfg nn_bench 0
234    set_namelist namelist_cfg ln_ctl .false.
235    set_namelist namelist_cfg ln_clobber .true.
236    set_namelist namelist_cfg nn_solv 2
237    set_namelist namelist_cfg jpni 1
238    set_namelist namelist_cfg jpnj 4
239    set_namelist namelist_cfg jpnij 4
240    if [ ${USING_MPMD} == "yes" ] ; then
241       set_xio_using_server iodef.xml true
242    else
243       set_xio_using_server iodef.xml false
244    fi
245    cd ${SETTE_DIR}
246    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
247    cd ${SETTE_DIR}
248    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
249
250    cd ${SETTE_DIR}
251    export TEST_NAME="REPRO_2_2"
252    . ./prepare_exe_dir.sh
253    JOB_FILE=${EXE_DIR}/run_job.sh
254    NPROC=4
255    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
256    cd ${EXE_DIR}
257    set_namelist namelist_cfg cn_exp \"GYRE_22\"
258    set_namelist namelist_cfg nn_it000 1
259    set_namelist namelist_cfg nn_itend 60
260    set_namelist namelist_cfg nn_fwb 0
261    set_namelist namelist_cfg ln_ctl .false.
262    set_namelist namelist_cfg ln_clobber .true.
263    set_namelist namelist_cfg nn_solv 2
264    set_namelist namelist_cfg jpni 2
265    set_namelist namelist_cfg jpnj 2
266    set_namelist namelist_cfg jpnij 4
267    if [ ${USING_MPMD} == "yes" ] ; then
268       set_xio_using_server iodef.xml true
269    else
270       set_xio_using_server iodef.xml false
271    fi
272    cd ${SETTE_DIR}
273    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
274    cd ${SETTE_DIR}
275    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
276
277fi
278
279# TESTS FOR ORCA2_LIM_PISCES CONFIGURATION
280if [ ${config} -eq 3 ] ;  then
281    ## Restartability tests for ORCA2_LIM_PISCES
282    export TEST_NAME="LONG"
283    cd ${CONFIG_DIR}
284    . ./makenemo -m ${CMP_NAM} -n ORCA2LIMPIS_LONG -r ORCA2_LIM_PISCES -j 8 del_key ${DEL_KEYS}
285    cd ${SETTE_DIR}
286    . ./param.cfg
287    . ./all_functions.sh
288    . ./prepare_exe_dir.sh
289    JOB_FILE=${EXE_DIR}/run_job.sh
290    NPROC=4
291    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
292    cd ${EXE_DIR}
293    set_namelist namelist_cfg cn_exp \"O2LP_LONG\"
294    set_namelist namelist_cfg nn_it000 1
295    set_namelist namelist_cfg nn_itend 150
296    set_namelist namelist_cfg nn_stock 75
297    set_namelist namelist_cfg ln_clobber .true.
298    set_namelist namelist_cfg nn_fwb 0
299    set_namelist namelist_cfg jpni 2
300    set_namelist namelist_cfg jpnj 2
301    set_namelist namelist_cfg jpnij 4
302    set_namelist namelist_cfg nn_solv 2
303    set_namelist namelist_top_cfg ln_trcdta .false.
304    set_namelist namelist_top_cfg ln_diatrc .false.
305    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
306    # if not you need input files, and for tests is not necessary
307    set_namelist namelist_pisces_cfg ln_presatm .false.
308    set_namelist namelist_pisces_cfg ln_varpar .false.
309    set_namelist namelist_pisces_cfg ln_dust .false.
310    set_namelist namelist_pisces_cfg ln_solub .false.
311    set_namelist namelist_pisces_cfg ln_river .false.
312    set_namelist namelist_pisces_cfg ln_ndepo .false.
313    set_namelist namelist_pisces_cfg ln_ironsed .false.
314    set_namelist namelist_pisces_cfg ln_hydrofe .false.
315    if [ ${USING_MPMD} == "yes" ] ; then
316       set_xio_using_server iodef.xml true
317    else
318       set_xio_using_server iodef.xml false
319    fi
320    cd ${SETTE_DIR}
321    . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
322   
323    cd ${SETTE_DIR}
324    export TEST_NAME="SHORT"
325    . ./prepare_exe_dir.sh
326    cd ${EXE_DIR}
327    set_namelist namelist_cfg cn_exp \"O2LP_SHORT\"
328    set_namelist namelist_cfg nn_it000 76
329    set_namelist namelist_cfg nn_itend 150
330    set_namelist namelist_cfg nn_stock 75
331    set_namelist namelist_cfg ln_rstart .true.
332    set_namelist namelist_cfg nn_rstctl 2
333    set_namelist namelist_cfg ln_clobber .true.
334    set_namelist namelist_cfg nn_fwb 0
335    set_namelist namelist_cfg jpni 2
336    set_namelist namelist_cfg jpnj 2
337    set_namelist namelist_cfg jpnij 4
338    set_namelist namelist_cfg nn_solv 2
339    set_namelist namelist_top_cfg ln_diatrc .false.
340    set_namelist namelist_top_cfg ln_rsttr .true.
341    set_namelist namelist_top_cfg nn_rsttr 2
342    set_namelist namelist_cfg cn_ocerst_in \"O2LP_LONG_00000075_restart\"
343    set_namelist namelist_ice_cfg cn_icerst_in \"O2LP_LONG_00000075_restart_ice\"
344    set_namelist namelist_top_cfg cn_trcrst_in \"O2LP_LONG_00000075_restart_trc\"
345    # put ln_ironsed, ln_river, ln_ndepo, ln_dust
346    # if not you need input files, and for tests is not necessary
347    set_namelist namelist_pisces_cfg ln_presatm .false.
348    set_namelist namelist_pisces_cfg ln_varpar .false.
349    set_namelist namelist_pisces_cfg ln_dust .false.
350    set_namelist namelist_pisces_cfg ln_solub .false.
351    set_namelist namelist_pisces_cfg ln_river .false.
352    set_namelist namelist_pisces_cfg ln_ndepo .false.
353    set_namelist namelist_pisces_cfg ln_ironsed .false.
354    set_namelist namelist_pisces_cfg ln_hydrofe .false.
355    # put ln_pisdmp to false : no restoring to global mean value
356    set_namelist namelist_pisces_cfg ln_pisdmp .false.
357    for (( i=1; i<=$NPROC; i++)) ; do
358        L_NPROC=$(( $i - 1 ))
359        L_NPROC=`printf "%04d\n" ${L_NPROC}`
360        ln -sf ../LONG/O2LP_LONG_00000075_restart_${L_NPROC}.nc .
361        ln -sf ../LONG/O2LP_LONG_00000075_restart_trc_${L_NPROC}.nc .
362        ln -sf ../LONG/O2LP_LONG_00000075_restart_ice_${L_NPROC}.nc .
363    done
364    if [ ${USING_MPMD} == "yes" ] ; then
365       set_xio_using_server iodef.xml true
366    else
367       set_xio_using_server iodef.xml false
368    fi
369    cd ${SETTE_DIR}
370    . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
371    cd ${SETTE_DIR}
372    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
373fi
374
375if [ ${config} -eq 4 ] ;  then
376    ## Reproducibility tests for ORCA2_LIM_PISCES
377    export TEST_NAME="REPRO_4_4"
378    cd ${CONFIG_DIR}
379    . ./makenemo -m ${CMP_NAM} -n ORCA2LIMPIS_16 -r ORCA2_LIM_PISCES -j 8 add_key "key_mpp_rep" del_key ${DEL_KEYS}
380    cd ${SETTE_DIR}
381    . ./param.cfg
382    . ./all_functions.sh
383    . ./prepare_exe_dir.sh
384    JOB_FILE=${EXE_DIR}/run_job.sh
385    NPROC=16
386    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
387    cd ${EXE_DIR}
388    set_namelist namelist_cfg nn_it000 1
389    set_namelist namelist_cfg nn_itend 75
390    set_namelist namelist_cfg nn_fwb 0
391    set_namelist namelist_cfg ln_ctl .false.
392    set_namelist namelist_cfg ln_clobber .true.
393    set_namelist namelist_cfg jpni 4
394    set_namelist namelist_cfg jpnj 4
395    set_namelist namelist_cfg jpnij 16
396    set_namelist namelist_cfg nn_solv 2
397    set_namelist namelist_top_cfg ln_trcdta .false.
398    set_namelist namelist_top_cfg ln_diatrc .false.
399    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
400    # if not you need input files, and for tests is not necessary
401    set_namelist namelist_pisces_cfg ln_presatm .false.
402    set_namelist namelist_pisces_cfg ln_varpar .false.
403    set_namelist namelist_pisces_cfg ln_dust .false.
404    set_namelist namelist_pisces_cfg ln_solub .false.
405    set_namelist namelist_pisces_cfg ln_river .false.
406    set_namelist namelist_pisces_cfg ln_ndepo .false.
407    set_namelist namelist_pisces_cfg ln_ironsed .false.
408    set_namelist namelist_pisces_cfg ln_hydrofe .false.
409    # put ln_pisdmp to false : no restoring to global mean value
410    set_namelist namelist_pisces_cfg ln_pisdmp .false.
411    if [ ${USING_MPMD} == "yes" ] ; then
412       set_xio_using_server iodef.xml true
413    else
414       set_xio_using_server iodef.xml false
415    fi
416    cd ${SETTE_DIR}
417    . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
418    cd ${SETTE_DIR}
419    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
420
421    cd ${SETTE_DIR}
422    export TEST_NAME="REPRO_2_8"
423    . ./prepare_exe_dir.sh
424    JOB_FILE=${EXE_DIR}/run_job.sh
425    NPROC=16
426    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
427    cd ${EXE_DIR}
428    set_namelist namelist_cfg nn_it000 1
429    set_namelist namelist_cfg nn_itend 75
430    set_namelist namelist_cfg ln_clobber .true.
431    set_namelist namelist_cfg nn_fwb 0
432    set_namelist namelist_cfg jpni 2
433    set_namelist namelist_cfg jpnj 8
434    set_namelist namelist_cfg jpnij 16
435    set_namelist namelist_cfg nn_solv 2
436    set_namelist namelist_top_cfg ln_trcdta .false.
437    set_namelist namelist_top_cfg ln_diatrc .false.
438    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
439    # if not you need input files, and for tests is not necessary
440    set_namelist namelist_pisces_cfg ln_presatm .false.
441    set_namelist namelist_pisces_cfg ln_varpar .false.
442    set_namelist namelist_pisces_cfg ln_dust .false.
443    set_namelist namelist_pisces_cfg ln_solub .false.
444    set_namelist namelist_pisces_cfg ln_river .false.
445    set_namelist namelist_pisces_cfg ln_ndepo .false.
446    set_namelist namelist_pisces_cfg ln_ironsed .false.
447    set_namelist namelist_pisces_cfg ln_hydrofe .false.
448    # put ln_pisdmp to false : no restoring to global mean value
449    set_namelist namelist_pisces_cfg ln_pisdmp .false.
450    if [ ${USING_MPMD} == "yes" ] ; then
451       set_xio_using_server iodef.xml true
452    else
453       set_xio_using_server iodef.xml false
454    fi
455    cd ${SETTE_DIR}
456    . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
457    cd ${SETTE_DIR}
458    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
459fi
460
461# TESTS FOR ORCA2_OFF_PISCES CONFIGURATION
462if [ ${config} -eq 5 ] ;  then
463    ## Restartability tests for ORCA2_OFF_PISCES
464    export TEST_NAME="LONG"
465    cd ${CONFIG_DIR}
466    . ./makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_LONG -r ORCA2_OFF_PISCES -j 8 add_key "key_mpp_rep" del_key ${DEL_KEYS}
467    cd ${SETTE_DIR}
468    . ./param.cfg
469    . ./all_functions.sh
470    . ./prepare_exe_dir.sh
471    JOB_FILE=${EXE_DIR}/run_job.sh
472    NPROC=4
473    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
474    cd ${EXE_DIR}
475    set_namelist namelist_cfg cn_exp \"OFFP_LONG\"
476    set_namelist namelist_cfg nn_it000 1
477    set_namelist namelist_cfg nn_itend 40
478    set_namelist namelist_cfg nn_stock 20
479    set_namelist namelist_cfg ln_clobber .true.
480    set_namelist namelist_cfg jpni 2
481    set_namelist namelist_cfg jpnj 2
482    set_namelist namelist_cfg jpnij 4
483    set_namelist namelist_top_cfg ln_trcdta .false.
484    set_namelist namelist_top_cfg ln_diatrc .false.
485    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
486    # if not you need input files, and for tests is not necessary
487    set_namelist namelist_pisces_cfg ln_presatm .false.
488    set_namelist namelist_pisces_cfg ln_varpar .false.
489    set_namelist namelist_pisces_cfg ln_dust .false.
490    set_namelist namelist_pisces_cfg ln_solub .false.
491    set_namelist namelist_pisces_cfg ln_river .false.
492    set_namelist namelist_pisces_cfg ln_ndepo .false.
493    set_namelist namelist_pisces_cfg ln_ironsed .false.
494    set_namelist namelist_pisces_cfg ln_hydrofe .false.
495    # put ln_pisdmp to false : no restoring to global mean value
496    set_namelist namelist_pisces_cfg ln_pisdmp .false.
497    if [ ${USING_MPMD} == "yes" ] ; then
498       set_xio_using_server iodef.xml true
499    else
500       set_xio_using_server iodef.xml false
501    fi
502    cd ${SETTE_DIR}
503    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
504   
505    cd ${SETTE_DIR}
506    export TEST_NAME="SHORT"
507    . ./prepare_exe_dir.sh
508    cd ${EXE_DIR}
509    set_namelist namelist_cfg cn_exp \"OFFP_SHORT\"
510    set_namelist namelist_cfg nn_it000 21
511    set_namelist namelist_cfg nn_itend 40
512    set_namelist namelist_cfg nn_stock 20
513    set_namelist namelist_cfg ln_clobber .true.
514    set_namelist namelist_cfg jpni 2
515    set_namelist namelist_cfg jpnj 2
516    set_namelist namelist_cfg jpnij 4
517    set_namelist namelist_top_cfg ln_diatrc .false.
518    set_namelist namelist_top_cfg ln_rsttr .true.
519    set_namelist namelist_top_cfg nn_rsttr 2
520    set_namelist namelist_top_cfg cn_trcrst_in \"OFFP_LONG_00000020_restart_trc\"
521    for (( i=1; i<=$NPROC; i++)) ; do
522        L_NPROC=$(( $i - 1 ))
523        L_NPROC=`printf "%04d\n" ${L_NPROC}`
524        ln -sf ../LONG/OFFP_LONG_00000020_restart_trc_${L_NPROC}.nc .
525    done
526    # put ln_ironsed, ln_river, ln_ndepo, ln_dust
527    # if not you need input files, and for tests is not necessary
528    set_namelist namelist_pisces_cfg ln_presatm .false.
529    set_namelist namelist_pisces_cfg ln_varpar .false.
530    set_namelist namelist_pisces_cfg ln_dust .false.
531    set_namelist namelist_pisces_cfg ln_solub .false.
532    set_namelist namelist_pisces_cfg ln_river .false.
533    set_namelist namelist_pisces_cfg ln_ndepo .false.
534    set_namelist namelist_pisces_cfg ln_ironsed .false.
535    set_namelist namelist_pisces_cfg ln_hydrofe .false.
536    # put ln_pisdmp to false : no restoring to global mean value
537    set_namelist namelist_pisces_cfg ln_pisdmp .false.
538    if [ ${USING_MPMD} == "yes" ] ; then
539       set_xio_using_server iodef.xml true
540    else
541       set_xio_using_server iodef.xml false
542    fi
543    cd ${SETTE_DIR}
544    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME}  ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
545    cd ${SETTE_DIR}
546    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
547fi
548
549if [ ${config} -eq 6 ] ;  then
550    ## Reproducibility tests for ORCA2_OFF_PISCES
551    export TEST_NAME="REPRO_4_4"
552    cd ${CONFIG_DIR}
553    . ./makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_16 -r ORCA2_OFF_PISCES -j 8 add_key "key_mpp_rep" del_key ${DEL_KEYS}
554    cd ${SETTE_DIR}
555    . ./param.cfg
556    . ./all_functions.sh
557    . ./prepare_exe_dir.sh
558    JOB_FILE=${EXE_DIR}/run_job.sh
559    NPROC=16
560    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
561    cd ${EXE_DIR}
562    set_namelist namelist_cfg nn_it000 1
563    set_namelist namelist_cfg nn_itend 40
564    set_namelist namelist_cfg ln_ctl .false.
565    set_namelist namelist_cfg ln_clobber .true.
566    set_namelist namelist_cfg jpni 4
567    set_namelist namelist_cfg jpnj 4
568    set_namelist namelist_cfg jpnij 16
569    set_namelist namelist_top_cfg ln_trcdta .false.
570    set_namelist namelist_top_cfg ln_diatrc .false.
571    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
572    # if not you need input files, and for tests is not necessary
573    set_namelist namelist_pisces_cfg ln_presatm .false.
574    set_namelist namelist_pisces_cfg ln_varpar .false.
575    set_namelist namelist_pisces_cfg ln_dust .false.
576    set_namelist namelist_pisces_cfg ln_solub .false.
577    set_namelist namelist_pisces_cfg ln_river .false.
578    set_namelist namelist_pisces_cfg ln_ndepo .false.
579    set_namelist namelist_pisces_cfg ln_ironsed .false.
580    set_namelist namelist_pisces_cfg ln_hydrofe .false.
581    # put ln_pisdmp to false : no restoring to global mean value
582    set_namelist namelist_pisces_cfg ln_pisdmp .false.
583    if [ ${USING_MPMD} == "yes" ] ; then
584       set_xio_using_server iodef.xml true
585    else
586       set_xio_using_server iodef.xml false
587    fi
588    cd ${SETTE_DIR}
589    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
590    cd ${SETTE_DIR}
591    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
592
593    cd ${SETTE_DIR}
594    export TEST_NAME="REPRO_2_8"
595    . ./prepare_exe_dir.sh
596    JOB_FILE=${EXE_DIR}/run_job.sh
597    NPROC=16
598    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
599    cd ${EXE_DIR}
600    set_namelist namelist_cfg nn_it000 1
601    set_namelist namelist_cfg nn_itend 40
602    set_namelist namelist_cfg ln_ctl .false.
603    set_namelist namelist_cfg ln_clobber .true.
604    set_namelist namelist_cfg jpni 2
605    set_namelist namelist_cfg jpnj 8
606    set_namelist namelist_cfg jpnij 16
607    set_namelist namelist_top_cfg ln_trcdta .false.
608    set_namelist namelist_top_cfg ln_diatrc .false.
609    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
610    # if not you need input files, and for tests is not necessary
611    set_namelist namelist_pisces_cfg ln_presatm .false.
612    set_namelist namelist_pisces_cfg ln_varpar .false.
613    set_namelist namelist_pisces_cfg ln_dust .false.
614    set_namelist namelist_pisces_cfg ln_solub .false.
615    set_namelist namelist_pisces_cfg ln_river .false.
616    set_namelist namelist_pisces_cfg ln_ndepo .false.
617    set_namelist namelist_pisces_cfg ln_ironsed .false.
618    set_namelist namelist_pisces_cfg ln_hydrofe .false.
619    # put ln_pisdmp to false : no restoring to global mean value
620    set_namelist namelist_pisces_cfg ln_pisdmp .false.
621    if [ ${USING_MPMD} == "yes" ] ; then
622       set_xio_using_server iodef.xml true
623    else
624       set_xio_using_server iodef.xml false
625    fi
626    cd ${SETTE_DIR}
627    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
628    cd ${SETTE_DIR}
629    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
630fi
631
632# TESTS FOR AMM12 CONFIGURATION
633if [ ${config} -eq 7 ] ;  then
634    ## Restartability tests for AMM12
635    export TEST_NAME="LONG"
636    cd ${CONFIG_DIR}
637    . ./makenemo -m ${CMP_NAM} -n AMM12_LONG -r AMM12 -j 8 add_key "key_tide" del_key ${DEL_KEYS}
638    cd ${SETTE_DIR}
639    . ./param.cfg
640    . ./all_functions.sh
641    . ./prepare_exe_dir.sh
642    JOB_FILE=${EXE_DIR}/run_job.sh
643    NPROC=32
644    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
645    cd ${EXE_DIR}
646    set_namelist namelist_cfg nn_it000 1
647    set_namelist namelist_cfg nn_itend 576
648    set_namelist namelist_cfg nn_stock 288
649    set_namelist namelist_cfg nn_fwb 0
650    set_namelist namelist_cfg ln_ctl .false.
651    set_namelist namelist_cfg ln_clobber .true.
652    set_namelist namelist_cfg jpni 8
653    set_namelist namelist_cfg jpnj 4
654    set_namelist namelist_cfg jpnij 32
655    if [ ${USING_MPMD} == "yes" ] ; then
656       set_xio_using_server iodef.xml true
657    else
658       set_xio_using_server iodef.xml false
659    fi
660    cd ${SETTE_DIR}
661    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
662
663    cd ${SETTE_DIR}
664    export TEST_NAME="SHORT"
665    . ./prepare_exe_dir.sh
666    cd ${EXE_DIR}
667    set_namelist namelist_cfg nn_it000 289
668    set_namelist namelist_cfg nn_itend 576
669    set_namelist namelist_cfg nn_fwb 0
670    set_namelist namelist_cfg ln_ctl .false.
671    set_namelist namelist_cfg ln_clobber .true.
672    set_namelist namelist_cfg jpni 8
673    set_namelist namelist_cfg jpnj 4
674    set_namelist namelist_cfg jpnij 32
675    set_namelist namelist_cfg ln_rstart .true.
676    set_namelist namelist_cfg nn_rstctl 2
677    set_namelist namelist_cfg cn_ocerst_in \"AMM12_00000288_restart_oce_out\"
678    set_namelist namelist_cfg nn_date0 20120102
679    for (( i=1; i<=$NPROC; i++)) ; do
680        L_NPROC=$(( $i - 1 ))
681        L_NPROC=`printf "%04d\n" ${L_NPROC}`
682        ln -sf ../LONG/AMM12_00000288_restart_oce_out_${L_NPROC}.nc .
683    done
684    if [ ${USING_MPMD} == "yes" ] ; then
685       set_xio_using_server iodef.xml true
686    else
687       set_xio_using_server iodef.xml false
688    fi
689    cd ${SETTE_DIR}
690    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
691    cd ${SETTE_DIR}
692    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
693fi
694
695if [ ${config} -eq 8 ] ;  then
696## Reproducibility tests for AMM12
697    export TEST_NAME="REPRO_8_4"
698    cd ${CONFIG_DIR}
699    . ./makenemo -m ${CMP_NAM} -n AMM12_32 -r AMM12 -j 8 add_key "key_mpp_rep key_tide" del_key ${DEL_KEYS}
700    cd ${SETTE_DIR}
701    . ./param.cfg
702    . ./all_functions.sh
703    . ./prepare_exe_dir.sh
704    JOB_FILE=${EXE_DIR}/run_job.sh
705    NPROC=32
706    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
707    cd ${EXE_DIR}
708    set_namelist namelist_cfg nn_it000 1
709    set_namelist namelist_cfg nn_itend 576
710    set_namelist namelist_cfg nn_fwb 0
711    set_namelist namelist_cfg ln_ctl .false.
712    set_namelist namelist_cfg ln_clobber .true.
713    set_namelist namelist_cfg jpni 8
714    set_namelist namelist_cfg jpnj 4
715    set_namelist namelist_cfg jpnij 32
716    if [ ${USING_MPMD} == "yes" ] ; then
717       set_xio_using_server iodef.xml true
718    else
719       set_xio_using_server iodef.xml false
720    fi
721    cd ${SETTE_DIR}
722    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
723    cd ${SETTE_DIR}
724    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
725
726    cd ${SETTE_DIR}
727    export TEST_NAME="REPRO_4_8"
728    . ./prepare_exe_dir.sh
729    cd ${EXE_DIR}
730    set_namelist namelist_cfg nn_it000 1
731    set_namelist namelist_cfg nn_itend 576
732    set_namelist namelist_cfg nn_fwb 0
733    set_namelist namelist_cfg ln_ctl .false.
734    set_namelist namelist_cfg ln_clobber .true.
735    set_namelist namelist_cfg jpni 4
736    set_namelist namelist_cfg jpnj 8
737    set_namelist namelist_cfg jpnij 32
738    if [ ${USING_MPMD} == "yes" ] ; then
739       set_xio_using_server iodef.xml true
740    else
741       set_xio_using_server iodef.xml false
742    fi
743    cd ${SETTE_DIR}
744    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
745    cd ${SETTE_DIR}
746    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
747fi
748
749
750# TESTS FOR ORCA2_SAS_LIM CONFIGURATION
751if [ ${config} -eq 9 ] ;  then
752    ## Restartability tests for SAS
753    export TEST_NAME="LONG"
754    cd ${CONFIG_DIR}
755    . ./makenemo -m ${CMP_NAM} -n SAS_LONG -r ORCA2_SAS_LIM -j 8 add_key "key_mpp_rep" del_key ${DEL_KEYS}
756    cd ${SETTE_DIR}
757    . ./param.cfg
758    . ./all_functions.sh
759    . ./prepare_exe_dir.sh
760    JOB_FILE=${EXE_DIR}/run_job.sh
761    NPROC=32
762    \rm $JOB_FILE
763    cd ${EXE_DIR}
764    set_namelist namelist_cfg cn_exp \"SAS\"
765    set_namelist namelist_cfg nn_it000 1
766    set_namelist namelist_cfg nn_itend 100
767    set_namelist namelist_cfg nn_stock 50
768    set_namelist namelist_cfg ln_ctl .false.
769    set_namelist namelist_cfg ln_clobber .true.
770    set_namelist namelist_cfg nn_fwb 0
771    set_namelist namelist_cfg jpni 8
772    set_namelist namelist_cfg jpnj 4
773    set_namelist namelist_cfg jpnij 32
774    if [ ${USING_MPMD} == "yes" ] ; then
775       set_xio_using_server iodef.xml true
776    else
777       set_xio_using_server iodef.xml false
778    fi
779    cd ${SETTE_DIR}
780    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
781
782    cd ${SETTE_DIR}
783    export TEST_NAME="SHORT"
784    . ./prepare_exe_dir.sh
785    cd ${EXE_DIR}
786    set_namelist namelist_cfg cn_exp \"SAS\"
787    set_namelist namelist_cfg nn_it000 51
788    set_namelist namelist_cfg nn_itend 100
789    set_namelist namelist_cfg ln_ctl .false.
790    set_namelist namelist_cfg ln_clobber .true.
791    set_namelist namelist_cfg nn_fwb 0
792    set_namelist namelist_cfg jpni 8
793    set_namelist namelist_cfg jpnj 4
794    set_namelist namelist_cfg jpnij 32
795    set_namelist namelist_cfg nn_rstctl 2
796    set_namelist namelist_cfg cn_ocerst_in \"SAS_00000050_restart\"
797    for (( i=1; i<=$NPROC; i++)) ; do
798        L_NPROC=$(( $i - 1 ))
799        L_NPROC=`printf "%04d\n" ${L_NPROC}`
800        ln -sf ../LONG/SAS_00000050_restart_${L_NPROC}.nc .
801    done
802    if [ ${USING_MPMD} == "yes" ] ; then
803       set_xio_using_server iodef.xml true
804    else
805       set_xio_using_server iodef.xml false
806    fi
807    cd ${SETTE_DIR}
808    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
809    cd ${SETTE_DIR}
810    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
811fi
812
813if [ ${config} -eq 10 ] ;  then
814## Reproducibility tests for ORCA2_SAS_LIM
815    export TEST_NAME="REPRO_8_4"
816    cd ${CONFIG_DIR}
817    . ./makenemo -m ${CMP_NAM} -n SAS_32 -r ORCA2_SAS_LIM -j 8 add_key "key_mpp_rep" del_key ${DEL_KEYS}
818    cd ${SETTE_DIR}
819    . ./param.cfg
820    . ./all_functions.sh
821    . ./prepare_exe_dir.sh
822    JOB_FILE=${EXE_DIR}/run_job.sh
823    NPROC=32
824    \rm ${JOB_FILE}
825    cd ${EXE_DIR}
826    set_namelist namelist_cfg cn_exp \"SAS\"
827    set_namelist namelist_cfg nn_it000 51
828    set_namelist namelist_cfg nn_itend 100
829    set_namelist namelist_cfg ln_ctl .false.
830    set_namelist namelist_cfg ln_clobber .true.
831    set_namelist namelist_cfg nn_fwb 0
832    set_namelist namelist_cfg jpni 8
833    set_namelist namelist_cfg jpnj 4
834    set_namelist namelist_cfg jpnij 32
835    if [ ${USING_MPMD} == "yes" ] ; then
836       set_xio_using_server iodef.xml true
837    else
838       set_xio_using_server iodef.xml false
839    fi
840    cd ${SETTE_DIR}
841    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE}  ${NUM_XIOSERVERS}
842    cd ${SETTE_DIR}
843    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
844    cd ${SETTE_DIR}
845    export TEST_NAME="REPRO_4_8"
846    . ./prepare_exe_dir.sh
847    cd ${EXE_DIR}
848    set_namelist namelist_cfg cn_exp \"SAS\"
849    set_namelist namelist_cfg nn_it000 51
850    set_namelist namelist_cfg nn_itend 100
851    set_namelist namelist_cfg ln_ctl .false.
852    set_namelist namelist_cfg ln_clobber .true.
853    set_namelist namelist_cfg nn_fwb 0
854    set_namelist namelist_cfg jpni 4
855    set_namelist namelist_cfg jpnj 8
856    set_namelist namelist_cfg jpnij 32
857    if [ ${USING_MPMD} == "yes" ] ; then
858       set_xio_using_server iodef.xml true
859    else
860       set_xio_using_server iodef.xml false
861    fi
862    cd ${SETTE_DIR}
863    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
864    cd ${SETTE_DIR}
865    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
866fi
867
868if [ ${config} -eq 11 ] ; then
869   ## Reproducibility tests for ORCA2_LIM_OBS
870    export TEST_NAME="REPRO_4_4"
871    cd ${CONFIG_DIR}
872    . ./makenemo -m ${CMP_NAM} -n ORCA2_LIM_OBS -r ORCA2_LIM_OBS -j 8 del_key ${DEL_KEYS}
873    cd ${SETTE_DIR}
874    . ./param.cfg
875    . ./all_functions.sh
876    . ./prepare_exe_dir.sh
877    JOB_FILE=${EXE_DIR}/run_job.sh
878    NPROC=16
879    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
880    cd ${EXE_DIR}
881    set_namelist namelist_cfg nn_it000 1
882    set_namelist namelist_cfg nn_itend 75
883    set_namelist namelist_cfg nn_fwb 0
884    set_namelist namelist_cfg ln_ctl .false.
885    set_namelist namelist_cfg ln_clobber .true.
886    set_namelist namelist_cfg jpni 4
887    set_namelist namelist_cfg jpnj 4
888    set_namelist namelist_cfg jpnij 16
889    set_namelist namelist_cfg nn_solv 2
890# DJL perhaps put the below in the namelist_cfg   
891    set_namelist namelist_cfg ln_t3d .true.
892    set_namelist namelist_cfg ln_s3d .true.
893    set_namelist namelist_cfg ln_profb .true.
894    set_namelist namelist_cfg ln_sst .true.
895    set_namelist namelist_cfg ln_sstfb .true.
896    set_namelist namelist_cfg ln_sla .true.
897    set_namelist namelist_cfg ln_slafb .true.
898    set_namelist namelist_cfg ln_seaice .false.
899    if [ ${USING_MPMD} == "yes" ] ; then
900       set_xio_using_server iodef.xml true
901    else
902       set_xio_using_server iodef.xml false
903    fi
904    cd ${SETTE_DIR}
905    . ./prepare_job.sh input_ORCA2_LIM_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
906    cd ${SETTE_DIR}
907    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
908
909   cd ${SETTE_DIR}
910    export TEST_NAME="REPRO_2_8"
911    . ./prepare_exe_dir.sh
912    JOB_FILE=${EXE_DIR}/run_job.sh
913    NPROC=16
914    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
915    cd ${EXE_DIR}
916    set_namelist namelist_cfg nn_it000 1
917    set_namelist namelist_cfg nn_itend 75
918    set_namelist namelist_cfg ln_clobber .true.
919    set_namelist namelist_cfg nn_fwb 0
920    set_namelist namelist_cfg jpni 2
921    set_namelist namelist_cfg jpnj 8
922    set_namelist namelist_cfg jpnij 16
923    set_namelist namelist_cfg nn_solv 2
924    set_namelist namelist_cfg ln_t3d .true.
925    set_namelist namelist_cfg ln_s3d .true.
926    set_namelist namelist_cfg ln_profb .true.
927    set_namelist namelist_cfg ln_sst .true.
928    set_namelist namelist_cfg ln_sstfb .true.
929    set_namelist namelist_cfg ln_sla .true.
930    set_namelist namelist_cfg ln_slafb .true.
931    set_namelist namelist_cfg ln_seaice .false.
932   if [ ${USING_MPMD} == "yes" ] ; then
933       set_xio_using_server iodef.xml true
934    else
935       set_xio_using_server iodef.xml false
936    fi
937    cd ${SETTE_DIR}
938    . ./prepare_job.sh input_ORCA2_LIM_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
939    cd ${SETTE_DIR}
940    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
941fi
942
943# TEST FOR ORCA2_LIM_AGRIF : simple test of running AGRIF (no restartability neither reproducibility tests)
944if [ ${config} -eq 12 ] ;  then
945    ## ORCA2_LIM with Agulhas AGRIF zoom in MPI
946    export TEST_NAME="SHORT"
947    cd ${CONFIG_DIR}
948    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_1_2 -r ORCA2_LIM -j 8 add_key "key_mpp_rep key_agrif" del_key "key_zdftmx" del_key ${DEL_KEYS}
949    cd ${SETTE_DIR}
950    . ./param.cfg
951    . ./all_functions.sh
952    . ./prepare_exe_dir.sh
953    JOB_FILE=${EXE_DIR}/run_job.sh
954    NPROC=2
955    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
956    cd ${EXE_DIR}
957    set_namelist namelist_cfg nn_it000 1
958    set_namelist namelist_cfg nn_itend 75
959    set_namelist namelist_cfg ln_ctl .false.
960    set_namelist namelist_cfg ln_clobber .true.
961    set_namelist namelist_cfg nn_fwb 0
962    set_namelist namelist_cfg jpni 1
963    set_namelist namelist_cfg jpnj 2
964    set_namelist namelist_cfg jpnij 2
965    set_namelist 1_namelist_cfg nn_it000 1
966    set_namelist 1_namelist_cfg nn_itend 150
967    set_namelist 1_namelist_cfg ln_ctl .false.
968    set_namelist 1_namelist_cfg ln_clobber .true.
969    if [ ${USING_MPMD} == "yes" ] ; then
970       set_xio_using_server iodef.xml true
971    else
972       set_xio_using_server iodef.xml false
973    fi
974    cd ${SETTE_DIR}
975    . ./prepare_job.sh input_ORCA2_LIM_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
976    cd ${SETTE_DIR}
977    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
978fi
979
980done
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