#!/bin/bash #! # @ shell = /usr/bin/ksh # @ job_name = MPI_config # @ output = out.$(job_name).$(jobid) # @ error = err.$(job_name).$(jobid) # @ job_type = parallel # @ total_tasks = NPROCS # @ wall_clock_limit = 0:30:00 # @ resources = ConsumableMemory(1562mb) # @ class = parallel # @ node_usage = shared # @ notification = error # @ task_affinity = core # @ group = science # @ queue ulimit -c unlimited ulimit -s unlimited # # Test specific settings. Do not hand edit these lines; the fcm_job.sh script will set these # (via sed operating on this template job file). # OCEANCORES=NPROCS export SETTE_DIR=DEF_SETTE_DIR ############################################################### # # set up mpp computing environment # # Local settings for machine IBM Power7 (hpc2e at UK Met Office) # export MPIRUN="poe -pgmodel $MP_PGMMODEL -n $OCEANCORES -cmdfile" # # load sette functions (only post_test_tidyup needed) # . ${SETTE_DIR}/all_functions.sh # Don't remove neither change the following comment line # BODY # # These variables are needed by post_test_tidyup function in all_functions.sh # export EXE_DIR=DEF_EXE_DIR export INPUT_DIR=DEF_INPUT_DIR export CONFIG_DIR=DEF_CONFIG_DIR export NEMO_VALIDATION_DIR=DEF_NEMO_VALIDATION export NEW_CONF=DEF_NEW_CONF export CMP_NAM=DEF_CMP_NAM export TEST_NAME=DEF_TEST_NAME # # end of set up ############################################################### # # change to the working directory # cd ${EXE_DIR} echo Running on host `hostname` echo Time is `date` echo Directory is `pwd` # # Run the parallel MPI executable # if [ MPI_FLAG == "yes" ]; then n=1 echo "./opa" > ./alltasks while [ $n -lt $OCEANCORES ] do echo "./opa" >> ./alltasks n=$(( $n + 1 )) done time ${MPIRUN} ./alltasks else time ./opa fi # post_test_tidyup # END_BODY # Don't remove neither change the previous comment line exit