[5268] | 1 | #!/bin/bash |
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| 2 | |
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| 3 | |
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[5276] | 4 | # Set defaults |
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[5355] | 5 | #--------------------------------------------------- |
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| 6 | NEMO_TRUS=$( pwd $( dirname $0 ) ) |
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[5455] | 7 | DEBUG=0; PUBLISH=0 |
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[5464] | 8 | STATUS='FAILED'; STEP='' # Only at end status will change to OK |
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[5268] | 9 | |
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[5355] | 10 | # Get options for replacing some initials settings |
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| 11 | #--------------------------------------------------- |
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[5268] | 12 | while [ $# -ne 0 ]; do |
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| 13 | case $1 in |
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[5286] | 14 | -b|--branch ) NEMO_BRAN=$2 ; shift 2;; -d|--debug ) set -vx; DEBUG=1 ; shift ;; |
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[5464] | 15 | -e|--email ) EMAIL=$2 ; shift 2;; -j|--job ) NPROC=$2 ; shift 2;; |
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[5355] | 16 | -h|--help ) cat trusting_help.txt; exit 1;; -m|--machine) CFG_ARCH=$2 ; shift 2;; |
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| 17 | -n|--newconf) TEST_CONF=$2 ; shift 2;; -r|--refconf) REFE_CONF=$2 ; shift 2;; |
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[5286] | 18 | -t|--time ) TIME_LIMI=$2 ; shift 2;; -p|--publish) PUBLISH=1 ; shift ;; |
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[5383] | 19 | -u|--user ) CFG_USER=$2 ; shift 2;; -v|--version) NEMO_VERS=$2 ; shift 2;; |
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[5355] | 20 | *) cat trusting_help.txt; exit 1;; |
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[5268] | 21 | esac |
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| 22 | done |
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[5276] | 23 | |
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[5355] | 24 | # Initialization (super-computer & user environment) |
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| 25 | #--------------------------------------------------- |
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| 26 | if [[ ! -z "${CFG_ARCH}" && ! -z "${CFG_USER}" ]]; then |
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[5268] | 27 | |
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[5453] | 28 | if [ ! $( find ${NEMO_TRUS}/config -name ${CFG_USER}.cfg ) ]; then |
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| 29 | echo 'No configuration file in '${NEMO_TRUS}'/config for '${CFG_USER}; exit 1 |
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| 30 | elif [ ! $( find ${NEMO_TRUS}/config -name ${CFG_ARCH}.cfg ) ]; then |
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| 31 | echo 'No configuration file in '${NEMO_TRUS}'/config for '${CFG_ARCH}; exit 1 |
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[5355] | 32 | else |
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| 33 | . ${NEMO_TRUS}/trusting.env |
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| 34 | fi |
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[5268] | 35 | |
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[5355] | 36 | else |
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| 37 | cat ${NEMO_TRUS}/trusting_help.txt; exit 1 |
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| 38 | fi |
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[5268] | 39 | |
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[5355] | 40 | . ./trusting_func.sh |
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[5268] | 41 | |
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[5424] | 42 | # |
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| 43 | #--------------------------------------------------- |
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[5355] | 44 | mkdir -p ${TEST_DIR} ${REFE_DIR} |
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| 45 | echo ${TEST_DIR} && cd ${TEST_DIR} |
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[5464] | 46 | date_str=$( date -ud ${DATESTR} +"%F %R %Z" ) |
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| 47 | printf "Date\n${date_str}\n" > mesg_01_date_${CFG_USER}_${CFG_ARCH}.txt |
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[5355] | 48 | |
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[5444] | 49 | # SVN action on XIOS & NEMO essentials directories |
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| 50 | #--------------------------------------------------- |
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[5455] | 51 | print_step 'Get NEMO code state / repository' |
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[5444] | 52 | get_nemo_rev |
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| 53 | |
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[5438] | 54 | # Check softwares versions (source arch environment) |
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[5355] | 55 | #--------------------------------------------------- |
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[5452] | 56 | print_step 'Get softwares release' |
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[5438] | 57 | . ${ARCH_ENV} > /dev/null |
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[5424] | 58 | get_soft_rel |
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[5464] | 59 | cat model.log |
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[5268] | 60 | |
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[5444] | 61 | # XIOS compiling |
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[5355] | 62 | #--------------------------------------------------- |
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[5452] | 63 | print_step 'Compiling XIOS' |
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[5444] | 64 | cd ${DIR_XIOS} |
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[5459] | 65 | #./make_xios --full --arch $ARCH -job $NPROC #>& /dev/null |
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[5455] | 66 | [ ! -e ${DIR_XIOS}/lib/libxios.a ] && get_out $STATUS $STEP |
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[5444] | 67 | |
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[5355] | 68 | # NEMO config compiled from scratch |
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| 69 | #--------------------------------------------------- |
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[5452] | 70 | print_step "Compiling ${CONF_REF} configuration" |
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[5276] | 71 | cd ${NEMO_CONF} |
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[5459] | 72 | #[ -d ${TEST_CONF} ] && ./makenemo -n ${TEST_CONF} clean |
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[5455] | 73 | ./makenemo -n ${TEST_CONF} -r ${REFE_CONF} -m $ARCH -j $NPROC #>& /dev/null |
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[5453] | 74 | [ ! -e ${TEST_CONF}/BLD/bin/nemo.exe ] && get_out $STATUS $STEP |
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[5268] | 75 | |
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[5355] | 76 | # Get namelists, xml & forced files for running |
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| 77 | #--------------------------------------------------- |
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[5455] | 78 | print_step "Preparing job by copying ${CONF_REF} input files" |
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[5444] | 79 | cd ${TEST_DIR} |
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[5355] | 80 | find ${NEMO_CONF}/${TEST_CONF}/EXP00 -regex '.*\(cfg\|opa\|ref\|xml\)' -exec cp {} . \; |
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[5464] | 81 | get_inputs |
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[5453] | 82 | [ $? -ne 0 ] && get_out $STATUS $STEP |
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[5402] | 83 | [ $( find . -name '*.gz' -print -quit ) ] && gunzip *.gz |
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[5286] | 84 | |
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[5438] | 85 | # Check input files in all cases |
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| 86 | #--------------------------------------------------- |
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[5464] | 87 | print_step 'Difference with standard input files list' |
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[5438] | 88 | diff_inputs |
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[5452] | 89 | |
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[5355] | 90 | # Job submission & computing |
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| 91 | #--------------------------------------------------- |
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[5455] | 92 | print_step 'Submitting job' |
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[5453] | 93 | JOB_ID=$( ${JOB_SUBM} | awk '{print $NF}' ) |
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| 94 | [ $? -ne 0 ] && get_out $STATUS $STEP |
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[5464] | 95 | print_step 'Holding-Running job' |
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| 96 | job_pending |
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[5455] | 97 | print_step 'Job finished' |
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| 98 | |
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[5355] | 99 | # Eventual crash during computing |
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| 100 | #--------------------------------------------------- |
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[5455] | 101 | print_step 'Test if job crashed' |
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[5452] | 102 | if [[ ! -e ocean.output || $( grep 'E R R O R' ocean.output ) ]]; then |
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[5453] | 103 | comments 'E R R O R' |
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| 104 | get_out $STATUS $STEP |
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[5459] | 105 | fi |
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[5286] | 106 | |
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[5459] | 107 | # Inspect output text files |
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| 108 | #--------------------------------------------------- |
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| 109 | print_step 'Test ASCII output files diff' |
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[5464] | 110 | diff_textfiles |
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[5286] | 111 | |
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[5459] | 112 | # Inspect output NetCDF files |
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| 113 | #--------------------------------------------------- |
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| 114 | print_step 'Test last restart NetCDF files diff' |
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| 115 | diff_restart |
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[5268] | 116 | |
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[5459] | 117 | # Get computation duration |
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| 118 | #--------------------------------------------------- |
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| 119 | print_step 'Get real CPU time' |
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| 120 | get_cpu_time |
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[5268] | 121 | |
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[5464] | 122 | # Get comments (ocean.output & diff model.log) |
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[5459] | 123 | #--------------------------------------------------- |
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| 124 | comments 'W A R N I N G' |
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[5268] | 125 | |
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[5355] | 126 | # End |
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| 127 | #--------------------------------------------------- |
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[5452] | 128 | [ $STATUS == 'OK' ] && STEP='Code is reliable' |
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[5453] | 129 | get_out $STATUS $STEP |
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