source: branches/2015/dev_r5092_CNRS_SETTE/NEMOGCM/TRUST/trusting.sh @ 5464

Last change on this file since 5464 was 5464, checked in by nicolasmartin, 5 years ago

dev_r5092_CNRS_SETTE End of main script trusting.sh size reduction

  • Property eol-style set to native
  • Property svn:executable set to *
  • Property svn:keywords set to Author Date Id Rev URL
File size: 4.4 KB
Line 
1#!/bin/bash
2
3
4# Set defaults
5#---------------------------------------------------
6NEMO_TRUS=$( pwd $( dirname $0 ) )
7DEBUG=0; PUBLISH=0
8STATUS='FAILED'; STEP='' # Only at end status will change to OK
9
10# Get options for replacing some initials settings
11#---------------------------------------------------
12while [ $# -ne 0 ]; do
13    case $1 in
14        -b|--branch ) NEMO_BRAN=$2         ; shift 2;; -d|--debug  ) set -vx; DEBUG=1     ; shift  ;;
15   -e|--email  ) EMAIL=$2             ; shift 2;; -j|--job    ) NPROC=$2             ; shift 2;;
16   -h|--help   ) cat trusting_help.txt; exit  1;; -m|--machine) CFG_ARCH=$2          ; shift 2;;
17   -n|--newconf) TEST_CONF=$2         ; shift 2;; -r|--refconf) REFE_CONF=$2         ; shift 2;;
18   -t|--time   ) TIME_LIMI=$2         ; shift 2;; -p|--publish) PUBLISH=1            ; shift  ;;
19        -u|--user   ) CFG_USER=$2          ; shift 2;; -v|--version) NEMO_VERS=$2         ; shift 2;;
20                   *) cat trusting_help.txt; exit  1;;
21    esac
22done
23
24# Initialization (super-computer & user environment)
25#---------------------------------------------------
26if [[ ! -z "${CFG_ARCH}" && ! -z "${CFG_USER}" ]]; then
27
28    if   [ ! $( find ${NEMO_TRUS}/config -name ${CFG_USER}.cfg ) ]; then
29   echo 'No configuration file in '${NEMO_TRUS}'/config for '${CFG_USER}; exit 1
30    elif [ ! $( find ${NEMO_TRUS}/config -name ${CFG_ARCH}.cfg ) ]; then
31   echo 'No configuration file in '${NEMO_TRUS}'/config for '${CFG_ARCH}; exit 1
32    else
33   . ${NEMO_TRUS}/trusting.env
34    fi
35
36else
37    cat ${NEMO_TRUS}/trusting_help.txt; exit 1
38fi
39
40. ./trusting_func.sh
41
42#
43#---------------------------------------------------
44mkdir -p ${TEST_DIR} ${REFE_DIR}
45echo ${TEST_DIR} && cd ${TEST_DIR}
46date_str=$( date -ud ${DATESTR} +"%F %R %Z" )
47printf "Date\n${date_str}\n" > mesg_01_date_${CFG_USER}_${CFG_ARCH}.txt
48
49# SVN action on XIOS & NEMO essentials directories
50#---------------------------------------------------
51print_step 'Get NEMO code state / repository'
52get_nemo_rev
53
54# Check softwares versions (source arch environment)
55#---------------------------------------------------
56print_step 'Get softwares release'
57. ${ARCH_ENV} > /dev/null
58get_soft_rel
59cat model.log
60
61# XIOS compiling
62#---------------------------------------------------
63print_step 'Compiling XIOS'
64cd ${DIR_XIOS}
65#./make_xios --full --arch $ARCH -job $NPROC #>& /dev/null
66[ ! -e ${DIR_XIOS}/lib/libxios.a ] && get_out $STATUS $STEP
67
68# NEMO config compiled from scratch
69#---------------------------------------------------
70print_step "Compiling ${CONF_REF} configuration"
71cd ${NEMO_CONF}
72#[ -d ${TEST_CONF} ] && ./makenemo -n ${TEST_CONF} clean
73./makenemo -n ${TEST_CONF} -r ${REFE_CONF} -m $ARCH -j $NPROC #>& /dev/null
74[ ! -e ${TEST_CONF}/BLD/bin/nemo.exe ] && get_out $STATUS $STEP
75
76# Get namelists, xml & forced files for running
77#---------------------------------------------------
78print_step "Preparing job by copying ${CONF_REF} input files"
79cd ${TEST_DIR}
80find ${NEMO_CONF}/${TEST_CONF}/EXP00 -regex '.*\(cfg\|opa\|ref\|xml\)' -exec cp {} . \;
81get_inputs
82[ $? -ne 0 ] && get_out $STATUS $STEP
83[ $( find . -name '*.gz' -print -quit ) ] && gunzip *.gz
84
85# Check input files in all cases
86#---------------------------------------------------
87print_step 'Difference with standard input files list'
88diff_inputs
89
90# Job submission & computing
91#---------------------------------------------------
92print_step 'Submitting job'
93JOB_ID=$( ${JOB_SUBM} | awk '{print $NF}' )
94[ $? -ne 0 ] && get_out $STATUS $STEP
95print_step 'Holding-Running job'
96job_pending
97print_step 'Job finished'
98
99# Eventual crash during computing
100#---------------------------------------------------
101print_step 'Test if job crashed'
102if   [[ ! -e ocean.output || $( grep 'E R R O R' ocean.output ) ]]; then
103    comments 'E R R O R'
104    get_out $STATUS $STEP
105fi
106
107# Inspect output text files
108#---------------------------------------------------
109print_step 'Test ASCII output files diff'
110diff_textfiles
111
112# Inspect output NetCDF files
113#---------------------------------------------------
114print_step 'Test last restart NetCDF files diff'
115diff_restart
116
117# Get computation duration
118#---------------------------------------------------
119print_step 'Get real CPU time'
120get_cpu_time
121
122# Get comments (ocean.output & diff model.log)
123#---------------------------------------------------
124comments 'W A R N I N G'
125
126# End
127#---------------------------------------------------
128[ $STATUS == 'OK' ] && STEP='Code is reliable'
129get_out $STATUS $STEP
Note: See TracBrowser for help on using the repository browser.