1 | #!/bin/bash |
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2 | |
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3 | |
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4 | cd $( dirname $0 ) |
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5 | |
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6 | ## Set defaults |
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7 | ##--------------------------------------------------- |
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8 | NEMO_TRUS=$PWD |
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9 | DEBUG=0; PUBLISH=0; TIME_STEP=0 |
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10 | I_MODULE=0; ST='FAILED' ## No 'module' command & 'FAILED' status |
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11 | xios_full='--full'; stderr_redir='>&' ## DEBUG options |
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12 | |
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13 | |
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14 | ## Get options for replacing some initials settings |
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15 | ##--------------------------------------------------- |
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16 | while [ $# -ne 0 ]; do |
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17 | |
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18 | case $1 in |
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19 | '-a'|'--archive') NEMO_TARF=$2 ; shift 2;; '-b'|'--branch ') NEMO_BRAN=$2 ; shift 2;; |
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20 | '-d'|'--debug ') set -vx; DEBUG=1; shift ;; '-e'|'--email ') EMAIL=$2 ; shift 2;; |
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21 | '-j'|'--job ') NPROC=$2 ; shift 2;; '-h'|'--help ') cat trusting_help.txt; exit 1;; |
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22 | '-m'|'--machine') NEMO_HPCC=$2 ; shift 2;; '-n'|'--newconf') TEST_CONF=$2 ; shift 2;; |
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23 | '-r'|'--refconf') REFE_CONF=$2 ; shift 2;; '-t'|'--time ') TIME_LIMI=$2 ; shift 2;; |
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24 | '-p'|'--publish') PUBLISH=1 ; shift ;; '-u'|'--user ') NEMO_USER=$2 ; shift 2;; |
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25 | '-v'|'--version') NEMO_VERS=$2 ; shift 2;; "*" ) cat trusting_help.txt; exit 1;; |
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26 | esac |
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27 | |
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28 | done |
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29 | |
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30 | |
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31 | ## Initialization (super-computer & user environment) |
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32 | ##--------------------------------------------------- |
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33 | if [[ ! -z "${NEMO_HPCC}" && ! -z "${NEMO_USER}" ]]; then |
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34 | |
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35 | if [ ! $( find ${NEMO_TRUS}/config -name ${NEMO_USER}'.cfg' ) ]; then |
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36 | echo 'No configuration file (.cfg) in '${NEMO_TRUS}'/config for '${NEMO_USER}; exit 1 |
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37 | elif [ ! $( find ${NEMO_TRUS}/config -name ${NEMO_HPCC}'.cfg' ) ]; then |
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38 | echo 'No configuration file (.cfg) in '${NEMO_TRUS}'/config for '${NEMO_HPCC}; exit 1 |
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39 | else |
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40 | . ${NEMO_TRUS}/trusting.env |
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41 | fi |
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42 | |
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43 | else |
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44 | cat ${NEMO_TRUS}/trusting_help.txt; exit 1 |
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45 | fi |
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46 | |
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47 | . ./trusting_func.sh |
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48 | |
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49 | |
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50 | ## Summary of trusting test context |
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51 | ##--------------------------------------------------- |
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52 | printf "\n\ |
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53 | NEMO Trusting test:\n\ |
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54 | -------------------\n\ |
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55 | Testing ${TEST_CONF} based on ${REFE_CONF} from ${NEMO_BRAN}\n\ |
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56 | NEMO installation: ${NEMO_USER}\n\ |
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57 | Computing architecture: ${NEMO_HPCC}\n\ |
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58 | Trusting SVN version: $( svn info | awk '(NR == 9) {print $NF}' )\n" |
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59 | |
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60 | |
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61 | ## Making timestamped directory with messenger files |
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62 | ##--------------------------------------------------- |
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63 | print_step 'Time-stamp generation & testing directory creation' |
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64 | mkdir -p ${TEST_DIR} ${REFE_DIR} |
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65 | echo ${TEST_DIR} && cd ${TEST_DIR} |
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66 | init_files && get_date |
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67 | |
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68 | |
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69 | ## SVN action on XIOS & NEMO essentials directories |
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70 | ##--------------------------------------------------- |
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71 | print_step 'SVN command on NEMO directories:' |
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72 | get_nemo_rev |
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73 | |
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74 | |
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75 | ## Check softwares versions (source arch environment) |
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76 | ##--------------------------------------------------- |
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77 | print_step 'Get softwares releases' |
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78 | [ -e ${ARCH_ENV} ] && . ${ARCH_ENV} > /dev/null |
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79 | (( $? == 0 )) && export I_MODULE=1 |
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80 | get_soft_rel |
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81 | cat model.log |
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82 | |
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83 | |
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84 | ## XIOS compiling |
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85 | ##--------------------------------------------------- |
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86 | print_step 'Compile XIOS' |
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87 | cd ${DIR_XIOS} |
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88 | [ $DEBUG -eq 1 ] && xios_full='' && stderr_redir='>' |
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89 | eval ./make_xios ${xios_full} --arch ${NEMO_HPCC} --job $NPROC \ |
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90 | ${stderr_redir} /dev/null |
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91 | [ ! -e ${DIR_XIOS}/lib/libxios.a ] && get_out 1 |
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92 | |
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93 | ## NEMO config compiled from scratch |
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94 | ##--------------------------------------------------- |
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95 | print_step "Compile ${REFE_CONF} configuration" |
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96 | cd ${NEMO_CONF} |
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97 | |
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98 | if [[ -d ${TEST_CONF} && $DEBUG -eq 0 ]]; then |
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99 | eval ./makenemo -n ${TEST_CONF} clean_config > /dev/null <<EOF |
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100 | y |
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101 | EOF |
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102 | fi |
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103 | |
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104 | eval ./makenemo -n ${TEST_CONF} -r ${REFE_CONF} -m ${NEMO_HPCC} -j $NPROC \ |
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105 | add_key ${KEYS_ADD} del_key ${KEYS_DEL} \ |
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106 | ${stderr_redir} /dev/null |
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107 | [ ! -e ${TEST_CONF}/BLD/bin/nemo.exe ] && get_out 2 |
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108 | |
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109 | |
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110 | ## Get namelists, xml & forcing files for running |
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111 | ##--------------------------------------------------- |
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112 | print_step 'Set job (copying & extracting input files)' |
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113 | cd ${TEST_DIR} |
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114 | cp ${NEMO_CONF}/${TEST_CONF}/cpp_* . |
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115 | find ${NEMO_CONF}/${TEST_CONF}/EXP00 -regex '.*\(_cfg\|.in\|opa\|_ref\|.xml\)' -exec cp {} . \; |
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116 | get_inputs |
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117 | (( $? != 0 )) && get_out 3 |
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118 | [ $( find . -name '*.gz' -print -quit ) ] && find . -name '*.gz' -exec gunzip {} \; |
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119 | |
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120 | |
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121 | ## Check input files in all cases |
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122 | ##--------------------------------------------------- |
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123 | print_step 'Compare with standard input files list' |
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124 | diff_inputs |
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125 | |
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126 | |
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127 | ## Job submission & computing |
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128 | ##--------------------------------------------------- |
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129 | print_step 'Submit job' |
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130 | JOB_ID=$( eval ${JOB_SUBM} ) |
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131 | (( $? != 0 )) && get_out 4 |
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132 | print_step 'Pending job' |
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133 | job_pending |
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134 | print_step 'Job finished' |
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135 | |
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136 | |
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137 | ## Job state |
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138 | ##--------------------------------------------------- |
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139 | print_step 'Test job state' |
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140 | |
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141 | if [[ ! -e time.step || $( grep -q 'E R R O R' ocean.output ) ]]; then |
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142 | echo 'Error' |
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143 | comments 'E R R O R' |
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144 | get_out 5 |
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145 | else |
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146 | echo 'Good' |
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147 | ## Get time computation |
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148 | ##--------------------------------------------------- |
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149 | print_step 'Get real CPU time' |
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150 | get_cpu_time |
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151 | fi |
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152 | |
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153 | ST='OK' ## 'OK' by default |
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154 | |
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155 | |
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156 | ## Inspect output text files |
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157 | ##--------------------------------------------------- |
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158 | print_step 'Test output files diff' |
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159 | diff_results |
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160 | |
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161 | |
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162 | ## Inspect output NetCDF files |
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163 | ##--------------------------------------------------- |
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164 | print_step 'Test last restart files diff' |
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165 | diff_restart |
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166 | [ $ST == 'FAILED' ] && get_out 8 |
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167 | |
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168 | |
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169 | ## Get comments (ocean.output & diff model.log) |
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170 | ##--------------------------------------------------- |
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171 | comments 'W A R N I N G' |
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172 | |
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173 | |
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174 | ## End |
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175 | ##--------------------------------------------------- |
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176 | get_out 'Code is reliable' |
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