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Biblio.bib in branches/2016/dev_r6325_SIMPLIF_1/DOC/TexFiles/Biblio – NEMO

source: branches/2016/dev_r6325_SIMPLIF_1/DOC/TexFiles/Biblio/Biblio.bib @ 6347

Last change on this file since 6347 was 6347, checked in by gm, 8 years ago

#1683: SIMPLIF-1 : Phase with the v3.6_Stable (DOC+ZDF+traqsr+lbedo)

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3
4@STRING{AP = {Academic Press}}
5
6@STRING{AREPS = {Annual Review of Earth Planetary Science}}
7
8@STRING{ARFM = {Annual Review of Fluid Mechanics}}
9
10@STRING{ASL = {Atmospheric Science Letters}}
11
12@STRING{AW = {Addison-Wesley}}
13
14@STRING{CP = {Clarendon Press}}
15
16@STRING{CD = {Clim. Dyn.}}
17
18@STRING{CUP = {Cambridge University Press}}
19
20@STRING{CSR = {Cont. Shelf Res.}}
21
22@STRING{D = {Dover Publications}}
23
24@STRING{DAO = {Dyn. Atmos. Ocean}}
25
26@STRING{DSR = {Deep-Sea Res.}}
27
28@STRING{E = {Eyrolles}}
29
30@STRING{EFM ={Environ. Fluid Mech.}}
31
32@STRING{GRL = {Geophys. Res. Let.}}
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36@STRING{JAOT = {J. Atmos. Ocean Tech.}}
37
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44@STRING{JFM = {J. Fluid Mech.}}
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46@STRING{JGR = {J. Geophys. Res}}
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66@STRING{MWR = {Mon. Wea. Rev.}}
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68@STRING{Nature = {Nat.}}
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70@STRING{NH = {North-Holland}}
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72@STRING{Ocean = {Oceanology}}
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74@STRING{OD = {Ocean Dyn.}}
75
76@STRING{OM = {Ocean Modelling}}
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78@STRING{OS = {Ocean Sc.}}
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80@STRING{OUP = {Oxford University Press}}
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82@STRING{PH = {Prentice-Hall}}
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613  journal = OM,
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636  pages = {1--14},
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651  author = {L. Carr\`{e}re and F. Lyard},
652  title = {Modelling the barotropic response of the global ocean to atmospheric
653   wind and pressure forcing - comparisons with observations},
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655  year = {2003},
656  volume = {30},  number = {6},
657  doi = {10.1029/2002GL016473},
658  url = {http://dx.doi.org/10.1029/2002GL016473}
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670@TECHREPORT{Chanut2005,
671 author = {J. Chanut},
672 title = {Nesting code for NEMO},
673 year = {2005},
674 institution = {European Union: Marine Environment and Security for the European Area (MERSEA) Integrated Project},
675note = {MERSEA-WP09-MERCA-TASK-9.1.1}
676}
677
678@ARTICLE{Chassignet_al_JPO03,
679  author = {Eric P. Chassignet and Linda T. Smith and George R. Halliwell},
680  title = {North Atlantic Simulations with the Hybrid Coordinate Ocean Model
681   (HYCOM): Impact of the Vertical Coordinate Choice, Reference Pressure, and Thermobaricity},
682  journal = JPO,
683  year = {2003},
684  volume = {33},
685  pages = {2504-2526}
686}
687
688@ARTICLE{Covey_al_CD00,
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690   and L. Fairhead and G.M. Flato and H. Gordon and E. Guilyardi and X. Jiang
691   and T.C. Johns and H. Le Treut and G. Madec and G.A. Meehl and R. Miller
692   and A. Noda and S. B. Power and E. Roeckner and G. Russell and E.K. Schneider
693   and R.J. Stouffer and L. Terray and J.-S. von Storch},
694  title = {The seasonal cycle in coupled ocean-atmosphere general circulation models},
695  journal = CD,
696  year = {2000},
697  volume = {16},
698  pages = {775--787}
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700
701@ARTICLE{Canuto_2001,
702  author = {V. M. Canuto and A. Howard and Y. Cheng and M. S. Dubovikov},
703  title = {Ocean turbulence. PartI: One-point closure model-momentum and heat vertical diffusivities},
704  journal = JPO,
705  year = {2001},
706  volume = {24},  number = {12},
707  pages = {2546--2559}
708}
709
710@ARTICLE{Cox1987,
711  author = {M. Cox},
712  title = {Isopycnal diffusion in a z-coordinate ocean model},
713  journal = OM,
714  year = {1987},
715  volume = {74},
716  pages = {1--9}
717}
718
719@ARTICLE{Craig_Banner_JPO94,
720  author = {P. D. Craig and M. L. Banner},
721  title = {Modeling wave-enhanced turbulence in the ocean surface layer},
722  journal = JPO,
723  year = {1994},
724  volume = {24},  number = {12},
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727
728@ARTICLE{Craik_Leibovich_JFM76,
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737@ARTICLE{Cravatte_al_OM07,
738  author = {Cravatte, S. and G. Madec and T. Izumo and C. Menkes and A. Bozec},
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740   in a climate ocean model},
741  journal = OM,
742  year = {2007},
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744  pages = {28--48}
745}
746
747@BOOK{Daley_Barker_Bk01,
748  author = {R. Daley and E. Barker},
749  title = {NAVDAS Source Book 2001},
750  publisher = {NRL/PU/7530-01-441, Available from the Naval Research Laboratory, Monterey, CA., 93943-5502},
751  year = {2001},
752  pages = {163pp}
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754
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756  author = {S. J. D. D'Alessio and K. Abdella and N. A. McFarlane},
757  title = {A new second-order turbulence closure scheme for modeling the oceanic mixed layer},
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771   journal = {J. Climate},
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773        url = {http://dx.doi.org/10.1175/2007JCLI1508.1}
774}
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776  author = {Y. Dandonneau and C. Menkes and T. Gorgues and G. Madec},
777  title = {Reply to Peter Killworth, 2004 : '' Comment on the Oceanic Rossby
778   Waves acting as a “Hay Rake” for ecosystem by-products ''},
779  journal = {Science},
780  year = {2004},
781  volume = {304},
782  pages = {390}
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801}
802
803@article{de_lavergne_JPO2016_mixing,
804   author = {C. de Lavergne and G. Madec and J. Le Sommer and A. J. G. Nurser and A. C. Naveira Garabato },
805   title = {On Antarctic Bottom Water consumption in the abyssal ocean},
806   issn = {0022-3670},
807   url = {http://dx.doi.org/10.1175/JPO-D-14-0201.1},
808   doi = {10.1175/JPO-D-14-0201.1},
809   abstract = {In studies of ocean mixing, it is generally assumed that small-scale turbulent overturns lose 15-20 \% of their energy in eroding the background stratification. Accumulating evidence that this energy fraction, or mixing efficiency Rf, significantly varies depending on flow properties challenges this assumption, however. Here, we examine the implications of a varying mixing efficiency for ocean energetics and deep water mass transformation. Combining current parameterizations of internal wave-driven mixing with a recent model expressing Rf as a function of a turbulence intensity parameter Reb = εν/νN2, we show that accounting for reduced mixing efficiencies in regions of weak stratification or energetic turbulence (high Reb) strongly limits the ability of breaking internal waves to supply oceanic potential energy and drive abyssal upwelling. Moving from a fixed Rf = 1/6 to a variable efficiency Rf(Reb) causes Antarctic Bottom Water upwelling induced by locally-dissipating internal tides and lee waves to fall from 9 to 4 Sv, and the corresponding potential energy source to plunge from 97 to 44 GW. When adding the contribution of remotely-dissipating internal tides under idealized distributions of energy dissipation, the total rate of Antarctic Bottom Water upwelling is reduced by about a factor of 2, reaching 5-15 Sv compared to 10-33 Sv for a fixed efficiency. Our results suggest that distributed mixing, overflow-related boundary processes and geothermal heating are more effective in consuming abyssal waters than topographically-enhanced mixing by breaking internal waves. Our calculations also point to the importance of accurately constraining Rf(Reb) and including the effect in ocean models.},
810   journal = {Journal of Physical Oceanography},
811   year = {2016},
812   volume = {46},  pages = {635-–661}
813}
814
815@article{de_lavergne_JPO2016_efficiency,
816   author = {C. de Lavergne and G. Madec and J. Le Sommer and A. J. G. Nurser and A. C. Naveira Garabato },
817   title = {The impact of a variable mixing efficiency on the abyssal overturning},
818   issn = {0022-3670},
819   url = {http://dx.doi.org//10.1175/JPO-D-14-0259.1},
820   doi = {10.1175/JPO-D-14-0259.1},
821   abstract = {In studies of ocean mixing, it is generally assumed that small-scale turbulent overturns lose 15-20 \% of their energy in eroding the background stratification. Accumulating evidence that this energy fraction, or mixing efficiency Rf, significantly varies depending on flow properties challenges this assumption, however. Here, we examine the implications of a varying mixing efficiency for ocean energetics and deep water mass transformation. Combining current parameterizations of internal wave-driven mixing with a recent model expressing Rf as a function of a turbulence intensity parameter Reb = εν/νN2, we show that accounting for reduced mixing efficiencies in regions of weak stratification or energetic turbulence (high Reb) strongly limits the ability of breaking internal waves to supply oceanic potential energy and drive abyssal upwelling. Moving from a fixed Rf = 1/6 to a variable efficiency Rf(Reb) causes Antarctic Bottom Water upwelling induced by locally-dissipating internal tides and lee waves to fall from 9 to 4 Sv, and the corresponding potential energy source to plunge from 97 to 44 GW. When adding the contribution of remotely-dissipating internal tides under idealized distributions of energy dissipation, the total rate of Antarctic Bottom Water upwelling is reduced by about a factor of 2, reaching 5-15 Sv compared to 10-33 Sv for a fixed efficiency. Our results suggest that distributed mixing, overflow-related boundary processes and geothermal heating are more effective in consuming abyssal waters than topographically-enhanced mixing by breaking internal waves. Our calculations also point to the importance of accurately constraining Rf(Reb) and including the effect in ocean models.},
822   journal = {Journal of Physical Oceanography},
823   year = {2016},
824   volume = {46},  pages = {663-–681}
825}
826
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841  school = {Doctorat es Applied Mathematiques, Grenoble University, France},
842  year = {2014},
843  pages = {138pp}
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940   and K. Lindsay and G. Madec and E. Maier-Reimer and J.C. Mashall
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942   and R. Schlitzer and R. Slater and I.J. Totterdell and M.-F. Weirig
943   and Y. Yamanaka and A. Tool},
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966   and E. M. -Reimer and R. J. Matear and A. Mouchet and I. J. Totterdell
967   and Y. Yamanaka and K. Rodgers and G. Madec and J.C. Orr},
968  title = {Evaluation of OCMIP-2 ocean models’ deep circulation with mantle helium-3},
969  journal = JMS,
970  year = {2004},
971  pages = {1--22}
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976   Testor and D. Antoine and S. Marullo and R. Santoleri and G. Madec},
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978   Sea : a new climatology based on analysis of individual profiles},
979  journal = GRL,
980  year = {2005},
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982  pages = {L12605},
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991  journal = JGR,
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1000   from satellite altimeter data},
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1018  title = {Geothermal heating, diapycnal mixing and the abyssal circulation},
1019  journal = OS,
1020  year = {2009},
1021  volume = {5},
1022  pages = {281--325}
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1035  author = {EUROMODEL Group (P.M. Lehucher, L. Beautier, M. Chartier, F. Martel,
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1038   C. Herbaut, G. Madec, S. Speich, J. Nihoul, J. M. Beckers, P. Brasseur,
1039   E. Deleersnijder, S. Djenidi, J. Font, A. Castellon, E. Garcia-Ladona,
1040   M. J. Lopez-Garcia, M. Manriquez, M. Maso, J. Salat, J. Tintore,
1041   S. Alonso, D. Gomis, A. Viudez, M. Astraldi, D. Bacciola, M. Borghini,
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1043   and A. Harzallah, 1995 : Progress from 1989 to 1992 in understanding
1044   the circulation of the Western Mediterranean Sea. Oceanologica Acta,
1045   18, 2, 255-271.},
1046  title = {EUROMODEL Group (P.M. Lehucher, L. Beautier, M. Chartier, F. Martel,
1047   L. Mortier, P. Brehmer, C. Millot, C. Alberola, M. Benzhora, I. Taupier-Letage,
1048   G. Chabert d'Hieres, H. Didelle, P. Gleizon, D. Obaton, M. Cr\'{e}pon,
1049   C. Herbaut, G. Madec, S. Speich, J. Nihoul, J. M. Beckers, P. Brasseur,
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1054   and A. Harzallah, 1995 : Progress from 1989 to 1992 in understanding
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1062@PHDTHESIS{Farge1987,
1063  author = {M. Farge},
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1065  school = {Doctorat es Mathematiques, Paris VI University, France},
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1069
1070@ARTICLE{Farrow1995,
1071  author = {D. E. Farrow and D. P. Stevens},
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1080@ARTICLE{Flather1976,
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1082 year = {1976},
1083 title = {A tidal model of the north-west European continental shelf},
1084 journal = {Memoires de la Societ\'{e} Royale des Sciences de Li\`{e}ge},
1085 volume = {6},
1086 pages = {141--164}
1087}
1088
1089@ARTICLE{Flather_JPO94,
1090 author = {R.A. Flather},
1091 year = {1994},
1092 title = {A storm surge prediction model for the northern Bay of Bengal with application to the cyclone disaster in April 1991},
1093 journal = JPO,
1094 volume = {24},
1095 pages = {172--190}
1096}
1097
1098@ARTICLE{Fujio1991,
1099  author = {S. Fujio and N. Imasato},
1100  title = {Diagnostic calculation for circulation and water mass movement in
1101   the deep Pacific},
1102  journal = JGR,
1103  year = {1991},
1104  volume = {96},
1105  pages = {759--774}
1106}
1107
1108@ARTICLE{Galperin_al_JAS88,
1109  author = {B. Galperin and L. H. Kantha and S. Hassid and A. Rosati},
1110  title = {A quasi-equilibrium turbulent energy model for geophysical flows},
1111  journal = JAS,
1112  year = {1988},
1113  volume = {45},
1114  pages = {55--62}
1115}
1116
1117@ARTICLE{Gargett1984,
1118  author = {A. E. Gargett},
1119  title = {Vertical eddy diffusivity in the ocean interior},
1120  journal = JMR,
1121  year = {1984},
1122  volume = {42}
1123}
1124
1125@ARTICLE{Gaspar1990,
1126  author = {P. Gaspar and Y. Gr{\'e}goris and J.-M. Lefevre},
1127  title = {A simple eddy kinetic energy model for simulations of the oceanic vertical mixing\:
1128    Tests at Station Papa and long-term upper ocean study site},
1129  journal = JGR,
1130  year = {1990},
1131  volume = {95},  number = {C9}
1132}
1133
1134@ARTICLE{Gent1990,
1135  author = {P. R. Gent and J. C. Mcwilliams},
1136  title = {Isopycnal Mixing in Ocean Circulation Models},
1137  journal = JPO,
1138  year = {1990},
1139  volume = {20},  number = {1},
1140  pages = {150--155},
1141}
1142
1143@Article{Gentemann_al_JGR09,
1144  author =   {C. L. Gentemann  and P. J. Minnett and B. Ward},
1145  title =        {Profiles of Ocean Surface heating ({POSH}): A new model
1146                  of upper ocean diurnal warming},
1147  journal =     JGR,
1148  year =     {2009},
1149  Volume =   {114},
1150  Pages =    {C07017},
1151  doi =   {10.1029/2008JC004825},
1152  OPTannote =   {}
1153}
1154
1155@ARTICLE{Gerdes1993a,
1156  author = {R. Gerdes},
1157  title = {A primitive equation ocean circulation model using a general vertical
1158   coordinate transformation 1. Description and testing of the model},
1159  journal = JGR,
1160  year = {1993},
1161  volume = {98}
1162}
1163
1164@ARTICLE{Gerdes1993b,
1165  author = {R. Gerdes},
1166  title = {A primitive equation ocean circulation model using a general vertical
1167   coordinate transformation 2. Application to an overflow problem},
1168  journal = JGR,
1169  year = {1993},
1170  volume = {98},
1171  pages = {14703--14726}
1172}
1173@ARTICLE{Gerdes1991,
1174   Author = {Gerdes, R{\"u}diger and K{\"o}berle, Cornelia and Willebrand, J{\"u}rgen},
1175   Doi = {10.1007/BF00210006},
1176   Journal = {Clim. Dynamics},
1177   Number = {4},
1178   Pages = {211--226},
1179   Title = {The influence of numerical advection schemes on the results of ocean general circulation models},
1180   Url = {http://dx.doi.org/10.1007/BF00210006},
1181   Volume = {5},
1182   Year = {1991},
1183}
1184@TECHREPORT{Gibson_TR86,
1185  author = {J. K. Gibson},
1186  title = {Standard software development and maintenance},
1187  institution = {Operational Dep., ECMWF, Reading, UK.},
1188  year = {1986}
1189}
1190
1191@BOOK{Gill1982,
1192  title = {Atmosphere-Ocean Dynamics},
1193  publisher = {International Geophysics Series, Academic Press, New-York},
1194  year = {1982},
1195  author = {A. E. Gill}
1196}
1197
1198@article{goff_JGR2010,
1199   author = {J. A. Goff},
1200   title = {Global prediction of abyssal hill root-mean-square heights from small-scale altimetric gravity variability},
1201   issn = {2156-2202},
1202   url = {http://dx.doi.org/10.1029/2010JB007867},
1203   doi = {10.1029/2010JB007867},
1204   abstract = {Abyssal hills, which are pervasive landforms on the seafloor of the Earth's oceans, represent a potential tectonic record of the history of mid-ocean ridge spreading. However, the most detailed global maps of the seafloor, derived from the satellite altimetry-based gravity field, cannot be used to deterministically characterize such small-scale ({\textless}10 km) morphology. Nevertheless, the small-scale variability of the gravity field can be related to the statistical properties of abyssal hill morphology using the upward continuation formulation. In this paper, I construct a global prediction of abyssal hill root-mean-square (rms) heights from the small-scale variability of the altimetric gravity field. The abyssal hill-related component of the gravity field is derived by first masking distinct features, such as seamounts, mid-ocean ridges, and continental margins, and then applying a newly designed adaptive directional filter algorithm to remove fracture zone/discontinuity fabric. A noise field is derived empirically by correlating the rms variability of the small-scale gravity field to the altimetric noise field in regions of very low relief, and the noise variance is subtracted from the small-scale gravity variance. Suites of synthetically derived, abyssal hill formed gravity fields are generated as a function of water depth, basement rms heights, and sediment thickness and used to predict abyssal hill seafloor rms heights from corrected small-scale gravity rms height. The resulting global prediction of abyssal hill rms heights is validated qualitatively by comparing against expected variations in abyssal hill morphology and quantitatively by comparing against actual measurements of rms heights. Although there is scatter, the prediction appears unbiased.},
1205   volume = {115},
1206   number = {B12},
1207   journal = {Journal of Geophysical Research: Solid Earth},
1208   year = {2010},
1209   pages = {B12104},
1210}
1211
1212@ARTICLE{Goosse_al_JGR99,
1213  author = {H. Goosse and E. Deleersnijder and T. Fichefet and M. England},
1214  title = {Sensitivity of a global coupled ocean-sea ice model to the parameterization of vertical mixing},
1215  journal = JGR,
1216  year = {1999},
1217  volume = {104},
1218  pages = {13,681--13,695}
1219}
1220
1221@ARTICLE{Gorgues_al_GRL07,
1222  author = {T. Gorgues and C. Menkes and O. Aumont and K. Rodgers and G. Madec and Y. Dandonneau},
1223  title = {Indonesian Throughflow control of the eastern equatorial Pacific biogeochemistry},
1224  journal = GRL,
1225  year = {2007},
1226  volume = {34},
1227  pages = {L05609},
1228  doi = {10.1029/2006GL028210},
1229  url = {http://dx.doi.org/10.1029/2006GL028210}
1230}
1231
1232@ARTICLE{Graham_McDougall_JPO13,
1233  author = {F.S. Graham and T.J. McDougall},
1234  title = {Quantifying the nonconservative production of conservative temperature, potential temperature, and entropy},
1235  journal = JPO,
1236  year = {2013},
1237  volume = {43},
1238  pages = {838--862},
1239  url ={http://dx.doi.org/10.1175/JPO-D-11-0188.1}
1240}
1241
1242@ARTICLE{Greatbatch_JGR94,
1243  author = {R. J. Greatbatch},
1244  title = {A note on the representation of steric sea level in models that conserve
1245   volume rather than mass},
1246  journal = JGR,
1247  year = {1994},
1248  volume = {99},  number = {C6},
1249  pages = {12,767--12,771}
1250}
1251
1252@BOOK{Griffies_Bk04,
1253  title = {Fundamentals of ocean climate models},
1254  publisher = {Princeton University Press, 434pp},
1255  year = {2004},
1256  author = {S.M. Griffies}
1257}
1258
1259@ARTICLE{Griffies_JPO98,
1260  author = {S.M. Griffies},
1261  title = {The Gent-McWilliams skew-flux},
1262  journal = JPO,
1263  year = {1998},
1264  volume = {28},
1265  pages = {831--841}
1266}
1267
1268@ARTICLE{Griffies_al_OM09,
1269  author = {S.M. Griffies and A. Biastoch and C. Boning and F. Bryan and G. Danabasoglu
1270   and E. P. Chassignet and M. H. England and R. Gerdes and H. Haak
1271   and R. W. Hallberg and W. Hazeleger and J. Jungclaus and W. G. Large
1272   and G. Madec and A. Pirani and B. L. Samuels and M. Scheinert and
1273   A. Sen Gupta and C. A. Severijns and H. L. Simmons and A.-M. Treguier
1274   and M. Winton and S. Yeager and J. Yin},
1275  title = {Coordinated Ocean-ice Reference Experiments (COREs)},
1276  journal = OM,
1277  year = {2009},
1278  volume = {26},  number = {1-2},
1279  pages = {1--46},
1280  doi = {10.1016/j.ocemod.2008.08.007},
1281  url = {http://dx.doi.org/10.1016/j.ocemod.2008.08.007}
1282}
1283
1284@ARTICLE{Griffies_al_OS05,
1285  author = {S.M. Griffies and A. Gnanadesikan and K.W. Dixon and J.P. Dunne and
1286   R. Gerdes and M.J. Harrison and A. Rosati and J.L. Russell and B.L.
1287   Samuels and M.J. Spelman and M. Winton and R. Zhang},
1288  title = {Formulation of an ocean model for global climate simulations},
1289  journal = OS,
1290  year = {2005},
1291  volume = {1},
1292  pages = {45--79}
1293  }
1294
1295@ARTICLE{Griffies_al_JPO98,
1296  author = {S.M. Griffies and A. Gnanadesikan and R.C. Pacanowski and V.D. Larichev
1297   and J.K. Dukowicz and R.D. Smith},
1298  title = {Isoneutral Diffusion in a z-Coordinate Ocean Model},
1299  journal = JPO,
1300  year = {1998},
1301  volume = {28},  number = {5},
1302  pages = {805--830},
1303}
1304
1305@ARTICLE{Griffies_al_MWR01,
1306  author = {S.M. Griffies and R.C. Pacanowski and M. Schmidt and V. Balaji},
1307  title = {Tracer Conservation with an Explicit Free Surface Method for z-Coordinate
1308   Ocean Models},
1309  journal = MWR,
1310  year = {2001},
1311  volume = {129},  number = {5},
1312  pages = {1081--1098},
1313}
1314
1315@ARTICLE{Griffies_Hallberg_MWR00,
1316  author = {S.M. Griffies and R.W. Hallberg},
1317  title = {Biharmonic friction with a Smagorinsky-like viscosity for use in large-scale eddy-permitting ocean models},
1318  journal = MWR,
1319  year = {2000},
1320  volume = {128}, 
1321  pages = {2935–-2946},
1322 url = {http://dx.doi.org/10.1175/1520-0493(2000)128}
1323}
1324
1325@ARTICLE{Guilyardi_al_JC04,
1326  author = {E. Guilyardi and S. Gualdi and J. M. Slingo and A. Navarra and P. Delecluse
1327    and J. Cole and G. Madec and M. Roberts and M. Latif and L. Terray},
1328  title = {Representing El Ni\~{n}o in coupled ocean-atmosphere GCMs: the dominant role of the atmospheric component},
1329  journal = JC,
1330  year = {2004},
1331  volume = {17},
1332  pages = {4623--4629}
1333}
1334
1335@ARTICLE{Guilyardi_Madec_CD98,
1336  author = {E. Guilyardi and G. Madec},
1337  title = {Performance of the OPA-ARPEGE-T21 global ocean-atmosphere coupled model},
1338  journal = CD,
1339  year = {1997},
1340  volume = {13},
1341  pages = {149--165}
1342}
1343
1344@ARTICLE{Guilyardi_al_CD01,
1345  author = {E. Guilyardi and G. Madec and L. Terray},
1346  title = {The role of lateral ocean physics in the upper ocean thermal balance of a coupled ocean-atmosphere GCM},
1347  journal = CD,
1348  year = {2001},
1349  volume = {17},
1350  pages = {589--599},
1351  number = {8}
1352}
1353
1354@ARTICLE{Guilyardi_al_CRAS95,
1355  author = {E. Guilyardi and G. Madec and L. Terray and M. D\'{e}qu\'{e} and
1356   M. Pontaud and M. Imbard and D. Stephenson and M.-A. Filiberti and
1357   D. Cariolle and P. Delecluse and O. Thual},
1358  title = {Simulation couplée océan-atmosphère de la variabilité du climat},
1359  journal = {C. R. Acad. Sci Paris},
1360  year = {1995},
1361  volume = {320},  number = {s\'{e}rie IIa},
1362  pages = {683--690}
1363}
1364
1365@ARTICLE{Guyon_al_EP99,
1366  author = {M. Guyon and G. Madec and F.-X. Roux and M. Imbard},
1367  title = {A Parallel ocean model for high resolution studies},
1368  journal = {Lecture Notes in Computer Science},
1369  year = {1999},
1370  volume = {Euro-Par'99},
1371  pages = {603--607}
1372}
1373
1374@ARTICLE{Guyon_al_CalPar99,
1375  author = {M. Guyon and G. Madec and F.-X. Roux and M. Imbard and C. Herbaut
1376   and P. Fronier},
1377  title = {Parallelization of the OPA ocean model},
1378  journal = {Calculateurs Paralleles},
1379  year = {1999},
1380  volume = {11},  number = {4},
1381  pages = {499--517}
1382}
1383
1384@BOOK{Haltiner1980,
1385  title = {Numerical prediction and dynamic meteorology},
1386  publisher = {John Wiley {\&} Sons Eds., second edition},
1387  year = {1980},
1388  author = {G. J. Haltiner and R. T. Williams},
1389  pages = {477pp}
1390}
1391
1392@ARTICLE{Haney1991,
1393  author = {R. L. Haney},
1394  title = {On the Pressure Gradient Force over Steep Topography in Sigma Coordinate Ocean Models},
1395  journal = JPO,
1396  year = {1991},
1397  volume = {21},  number = {4},
1398  pages = {610--619},
1399}
1400
1401@ARTICLE{Hazeleger_Drijfhout_JPO98,
1402  author = {W. Hazeleger and S. S. Drijfhout},
1403  title = {Mode water variability in a model of the subtropical gyre: response to anomalous forcing},
1404  journal = JPO,
1405  year = {1998},
1406  volume = {28},
1407  pages = {266--288},
1408}
1409
1410@ARTICLE{Hazeleger_Drijfhout_JPO99,
1411  author = {W. Hazeleger and S. S. Drijfhout},
1412  title = {Stochastically forced mode water variability},
1413  journal = JPO,
1414  year = {1999},
1415  volume = {29},
1416  pages = {1772--1786},
1417}
1418
1419@ARTICLE{Hazeleger_Drijfhout_JGR00,
1420  author = {W. Hazeleger and S. S. Drijfhout},
1421  title = {A model study on internally generated variability in subtropical mode water formation},
1422  journal = JGR,
1423  year = {2000},
1424  volume = {105},
1425  pages = {13,965--13,979},
1426}
1427@ARTICLE{Hazeleger_Drijfhout_JPO00,
1428  author = {W. Hazeleger and S. S. Drijfhout},
1429  title = {Eddy subduction in a model of the subtropical gyre},
1430  journal = JPO,
1431  year = {2000},
1432  volume = {30},
1433  pages = {677--695},
1434}
1435
1436@ARTICLE{Hellerman_Rosenstein_JPO83,
1437  author = {S. Hellerman and  M. Rosenstein },
1438  title = {Normal monthly wind stress over the world ocean with error estimates},
1439  journal = JPO,
1440  year = {1983},
1441  volume = {13},
1442  pages = {1093--1104},
1443}
1444
1445@ARTICLE{He_Ding_JSC01,
1446  author = {Y. He and C. H. Q. Ding},
1447  title = {Using Accurate Arithmetics to Improve Numerical Reproducibility and Stability in Parallel Applications},
1448  journal = JSC,
1449  year = {2001},
1450  volume = {18},
1451  pages = {259--277},
1452}
1453
1454@ARTICLE{Hirt_al_JCP74,
1455  author = {C. W. Hirt and A. A. Amsden and J. L. Cook},
1456  title = {An Arbitrary Lagrangian--Eulerian Computing Method for All Flow Speeds},
1457  journal = JCP,
1458  year = {1974},
1459  volume = {14},
1460  pages = {227--253}
1461}
1462
1463@ARTICLE{Hofmeister_al_OM09,
1464  author = {R. Hofmeister and H. Burchard and J.-M. Beckers},
1465  title = {Non-uniform adaptive vertical grids for 3D numerical ocean models},
1466  journal = OM,
1467  year = {2009},
1468  volume = {33},
1469  pages = {70--86},
1470  doi = {10.1016/j.ocemod.2009.12.003},
1471  url = {http://dx.doi.org/10.1016/j.ocemod.2009.12.003},
1472  issn = {1463-5003},
1473}
1474
1475@ARTICLE{Holland1999,
1476  author = {D. Holland and A. Jenkins},
1477  title = {Modeling Thermodynamic Ice-Ocean Interactions at the Base of an Ice Shelf},
1478  journal = JPO,
1479  year = {1999},
1480  volume = {29}, 
1481  pages = {1787--1800},
1482}
1483
1484@ARTICLE{HollowayOM86,
1485  author = {Greg Holloway},
1486  title = {A Shelf Wave/Topographic Pump Drives Mean Coastal Circulation (part I)},
1487  journal = OM,
1488  year = {1986},
1489  volume = {68}, 
1490}
1491
1492@ARTICLE{HollowayJPO92,
1493  author = {Greg Holloway},
1494  title = {Representing Topographic Stress for Large-Scale Ocean Models},
1495  journal = JPO,
1496  year = {1992},
1497  volume = {22}, 
1498  pages = {1033--1046},
1499}
1500
1501@ARTICLE{HollowayJPO94,
1502  author = {Michael Eby and Greg Holloway},
1503  title = {Sensitivity of a Large-Scale Ocean Model to a Parameterization of Topographic Stress},
1504  journal = JPO,
1505  year = {1994},
1506  volume = {24}, 
1507  pages = {2577--2587},
1508}
1509
1510@ARTICLE{HollowayJGR09,
1511  author = {Greg Holloway and Zeliang Wang},
1512  title = {Representing eddy stress in an Arctic Ocean model},
1513  journal = JGR,
1514  year = {2009},
1515  doi = {10.1029/2008JC005169}, 
1516}
1517
1518@ARTICLE{HollowayOM08,
1519  author = {Mathew Maltrud and Greg Holloway},
1520  title = {Implementing biharmonic neptune in a global eddying ocean model},
1521  journal = OM,
1522  year = {2008},
1523  volume = {21}, 
1524  pages = {22--34},
1525}
1526
1527@ARTICLE{Hordoir_al_CD08,
1528  author = {R. Hordoir and J. Polcher and J.-C. Brun-Cottan and G. Madec},
1529  title = {Towards a parametrization of river discharges into ocean general
1530   circulation models: a closure through energy conservation},
1531  journal = CD,
1532  year = {2008},
1533  volume = {31},  number = {7-8},
1534  pages = {891--908},
1535  doi = {10.1007/s00382-008-0416-4},
1536  url = {http://dx.doi.org/10.1007/s00382-008-0416-4}
1537}
1538
1539@ARTICLE{Hsu1990,
1540  author = {Hsu, Yueh-Jiuan G. and Arakawa, Akio},
1541  title = {Numerical Modeling of the Atmosphere with an Isentropic Vertical Coordinate},
1542  journal = MWR,
1543  year = {1990},
1544  volume = {118},  number = {10},
1545  pages = {1933--1959},
1546}
1547
1548@ARTICLE{Huang_JPO93,
1549  author = {R.X. Huang},
1550  title = {Real freshwater flux as a natural boundary condition for the salinity
1551   balance and thermohaline circulation forced by evaporation and precipitation},
1552  journal = JPO,
1553  year = {1993},
1554  volume = {23},
1555  pages = {2428--2446}
1556}
1557
1558@TECHREPORT{Hunke2008,
1559  author = {E.C. Hunke and W.H. Lipscomb},
1560  title = {CICE: the Los Alamos sea ice model documentation and software user's manual,
1561        Version 4.0},
1562  institution = { Los Alamos National Laboratory, N.M.},
1563  publisher = {LA-CC-06-012, Los Alamos National Laboratory, N.M.},
1564  year = {2008}
1565}
1566
1567@TechReport{Hunter2006,
1568  Title                    = {Specification for Test Models of Ice Shelf Cavities},
1569  Author                   = {J. R. Hunter},
1570  Institution              = {Antarctic Climate \& Ecosystems Cooperative Research Centre Private Bag 80, Hobart, Tasmania 7001},
1571  Year                     = {2006},
1572}
1573
1574@TECHREPORT{TEOS10,
1575  author = {IOC and SCOR and IAPSO},
1576  title = {The international thermodynamic equation of seawater - 2010: Calculation and use of thermodynamic properties},
1577  institution = {Intergovernmental Oceanographic Commission},
1578  publisher = {Manuals and Guides No. 56, UNESCO (English)},
1579  year = {2010},
1580  pages = {196pp},
1581  url = {http://www.teos-10.org/pubs/TEOS-10_Manual.pdf}
1582}
1583
1584@ARTICLE{Iudicone_al_JPO08b,
1585  author = {D. Iudicone and G. Madec and B. Blanke and S. Speich},
1586  title = {The role of Southern Ocean surface forcings and mixing in the global conveyor},
1587  journal = JPO,
1588  year = {2008},
1589  volume = {38},
1590  pages = {1377--1400}
1591}
1592
1593@ARTICLE{Iudicone_al_JPO08a,
1594  author = {D. Iudicone and G. Madec and T. J. McDougall},
1595  title = {Diagnosing water transformations and the key role of light penetration},
1596  journal = JPO,
1597  year = {2008},
1598  volume = {38},
1599  pages = {1357--1376}
1600}
1601
1602@ARTICLE{Iudicone_al_JPO07,
1603  author = {D. Iudicone and K. Rodgers and R. Schopp and G. Madec},
1604  title = {An Exchange window for the Antarctic Intermediate Water Injection into the South Pacific},
1605  journal = JPO,
1606  year = {2007},
1607  volume = {37},
1608  pages = {31--49}
1609}
1610
1611@ARTICLE{Iudicone_al_JPO08c,
1612  author = {D. Iudicone and S. Speich and G. Madec and B. Blanke},
1613  title = {The global Conveyor Belt in a Southern Ocean perspective},
1614  journal = JPO,
1615  year = {2008},
1616  volume = {38},
1617  pages = {1401--1425}
1618}
1619
1620@ARTICLE{Izumo_al_CD10,
1621  author = {T. Izumo and S.Masson and J. Vialard and C. de Boyer Montegut and
1622   S. K. Behera and G. Madec and K. Takahashi and T. Yamagata},
1623  title = {Interannual variations of low-frequency Madden-Julian Oscillation in autral summer: Observations},
1624  journal = CD,
1625  year = {2010},
1626  volume = {35},  number = {4},
1627  pages = {669--683},
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2182   en M\'{e}diterran\'{e}e Occidentale - une approche num\'{e}rique},
2183  school = {Universit\'{e} Pierre et Marie Curie, Paris, France, 194pp.},
2184  year = {1990},
2185  month = {2 mai}
2186}
2187
2188@ARTICLE{Madec_al_DAO91,
2189  author = {G. Madec and M. Chartier and M. Cr\'{e}pon},
2190  title = {Effect of thermohaline forcing variability on deep water formation
2191   in the Northwestern Mediterranean Sea - a high resulution three-dimensional
2192   study},
2193  journal = DAO,
2194  year = {1991},
2195  volume = {15},
2196  pages = {301--332}
2197}
2198
2199@ARTICLE{Madec_al_JPO91,
2200  author = {G. Madec and M. Chartier and P. Delecluse and M. Cr\'{e}pon},
2201  title = {A three-dimensional numerical study of deep water formation in the Northwestern Mediterranean Sea .},
2202  journal = JPO,
2203  year = {1991},
2204  volume = {21},
2205  pages = {1349--1371}
2206}
2207
2208@INBOOK{Madec_Crepon_Bk91,
2209  chapter = {Thermohaline-driven deep water formation in the Northwestern Mediterranean
2210   Sea},
2211  pages = {241--265},
2212  title = {Deep convection and deep water formation in the oceans},
2213  publisher = {Elsevier Oceanographic Series, P.C. Chu and J.C. Gascard (Eds.)},
2214  year = {1991},
2215  author = {G. Madec and M. Cr\'{e}pon}
2216  }
2217
2218@ARTICLE{Madec1997,
2219  author = {G. Madec and P. Delecluse},
2220  title = {The OPA/ARPEGE and OPA/LMD Global Ocean-Atmosphere Coupled Model},
2221  journal = {Int. WOCE Newsletter},
2222  year = {1997},
2223  volume = {26},
2224  pages = {12--15}
2225}
2226
2227@TECHREPORT{Madec1998,
2228  author = {G. Madec and P. Delecluse and M. Imbard and C. Levy},
2229  title = {OPA 8 Ocean General Circulation Model - Reference Manual},
2230  institution = {LODYC/IPSL Note 11},
2231  year = {1998}
2232}
2233
2234@ARTICLE{Madec_Imbard_CD96,
2235  author = {G Madec and M Imbard},
2236  title = {A global ocean mesh to overcome the north pole singularity},
2237  journal = CD,
2238  year = {1996},
2239  volume = {12},
2240  pages = {381--388}
2241}
2242
2243@ARTICLE{Madec_al_JPO96,
2244  author = {G. Madec and F. Lott and P. Delecluse and M. Cr\'{e}pon},
2245  title = {Large-Scale Preconditioning of Deep-Water Formation in the Northwestern
2246   Mediterranean Sea},
2247  journal = JPO,
2248  year = {1996},
2249  volume = {26},  number = {8},
2250  pages = {1393--1408},
2251}
2252
2253@ARTICLE{Madec_al_OM88,
2254  author = {G. Madec and C. Rahier and M. Chartier},
2255  title = {A comparison of two-dimensional elliptic solvers for the streamfunction
2256   in a multilevel OGCM},
2257  journal = OM,
2258  year = {1988},
2259  volume = {78},
2260  pages = {1-6}
2261}
2262
2263@ARTICLE{Maes_al_CD98,
2264  author = {C. Maes and P. Delecluse and G. Madec},
2265  title = {Impact of westerly wind bursts on the warm pool of the TOGA-COARE
2266   domain in an OGCM},
2267  journal = CD,
2268  year = {1998},
2269  volume = {14},
2270  pages = {55--70}
2271}
2272
2273@ARTICLE{Maes_al_MWR97,
2274  author = {C. Maes and G. Madec and P. Delecluse},
2275  title = {Sensitivity of an Equatorial Pacific OGCM to the lateral diffusion},
2276  journal = MWR,
2277  year = {1997},
2278  volume = {125},  number = {5},
2279  pages = {958--971}
2280}
2281
2282@ARTICLE{Maggiore_al_PCE98,
2283  author = {A. Maggiore and  M. Zavatarelli and M. G. Angelucci and N. Pinardi},
2284  title = {Surface heat and water fluxes in the Adriatic Sea: seasonal and interannual variability},
2285  journal = {Phys Chem Earth},
2286  year = {1998},
2287  volume = {23},
2288  pages = {561--567}
2289}
2290
2291@ARTICLE{Maltrud1998,
2292  author = {M. E. Maltrud and R. D. Smith and A. J. Semtner and R. C. Malone},
2293  title = {Global eddy-resolving ocean simulations driven by 1985-1995 atmospheric
2294   winds},
2295  journal = JGR,
2296  year = {1998},
2297  volume = {103},  number = {C13},
2298  pages = {30,825--30,854}
2299}
2300
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2303  title = {Open boundary conditions for long-term integrations of Regional Oceanic
2304   Models},
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2306  year = {2001},
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2309}
2310
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2312  author = {P. Marsaleix and F. Auclair and J. W. Floor and M. J. Herrmann and
2313   C. Estournel and I. Pairaud and C. Ulses},
2314  title = {Energy conservation issues in sigma-coordinate free-surface ocean
2315   models},
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2317  year = {2008},
2318  volume = {20},  number = {1},
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2322}
2323
2324@Article{Marsh_GMD2015,
2325AUTHOR = {R. Marsh and V. O. Ivchenko and N. Skliris and S. Alderson and G. R. Bigg and G. Madec and A. T. Blaker and Y. Aksenov and B. Sinha and A. C. Coward and J. Le Sommer and N. Merino and V. B. Zalesny},
2326TITLE = {NEMO-ICB (v1.0): interactive icebergs in the NEMO ocean model globally configured at eddy-permitting resolution},
2327JOURNAL = {Geoscientific Model Development},
2328VOLUME = {8},
2329YEAR = {2015},
2330NUMBER = {5},
2331PAGES = {1547--1562},
2332url = {HTTP://www.geosci-model-dev.net/8/1547/2015/},
2333DOI = {10.5194/gmd-8-1547-2015}
2334}
2335
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2360  title = {Etude de l'oc\'{e}an mondial : mod\'{e}lisation de la circulation
2361   et du transport de traceurs anthropog\'{e}niques},
2362  school = {Universit\'{e} Pierre et Marie Curie, Paris, France, 201pp},
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2369   and F Codron and S. Denvil and L. Fairhead and T. Fichefet and M.-A.
2370   Filiberti and M.-A. Foujols and P. Friedlingstein and H. Goosse and
2371   J.-Y. Grandpeix and E. Guilyardi and F. Hourdin and G. Krinner and
2372   C. L\'{e}vy and G. Madec and J. Mignot and I. Musat and D. Swingedouw
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2382}
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2544   dans un jet g\'{e}ostrophique: le front Alm\'{e}ria-Oran},
2545  school = {Universit\'{e} Pierre et Marie Curie, Paris, France},
2546  year = {2001}
2547}
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3286
3287@ARTICLE{Williams_al_DAO09,
3288  author = {P.D. Williams and E. Guilyardi and G. Madec and S. Gualdi and E. Scoccimarro},
3289  title = {The role of mean ocean salinity on climate},
3290  journal = DAO,
3291  year = {2010},
3292  volume = {49},  number = {2-3},
3293  pages = {108--123},
3294  doi = {10.1016/j.dynatmoce.2009.02.001},
3295  url = {http://dx.doi.org/10.1016/j.dynatmoce.2009.02.001}
3296}
3297
3298@ARTICLE{Williams_al_GRL07,
3299  author = {P.D. Williams and E. Guilyardi and R. Sutton and J.M. Gregory and G. Madec},
3300  title = {A new feedback on climate change from the hydrological cycle},
3301  journal = GRL,
3302  year = {2007},
3303  volume = {34},
3304  pages = {L08706},
3305  doi = {10.1029/2007GL029275},
3306  url = {http://dx.doi.org/10.1029/2007GL029275}
3307}
3308
3309@ARTICLE{Williams_al_CD06,
3310  author = {P.D. Williams and E. Guilyardi and R. Sutton and J.M. Gregory and G. Madec},
3311  title = {On the climate response of the low-latitude Pacific ocean to changes in the global freshwater cycle},
3312  journal = CD,
3313  year = {2006},
3314  volume = {27},
3315  pages = {593--611}
3316}
3317
3318@ARTICLE{Zalesak_JCP79,
3319  author = {S. T. Zalesak},
3320  title = {Fully multidimensional flux corrected transport algorithms for fluids},
3321  journal = JCP,
3322  year = {1979},
3323  volume = {31}
3324}
3325
3326@ARTICLE{Zhang_Endoh_JGR92,
3327  author = {Zhang, R.-H. and Endoh, M.},
3328  title = {A free surface general circulation model for the tropical Pacific Ocean},
3329  journal = JGR,
3330  year = {1992},
3331  volume = {97},
3332  pages = {11,237--11,255}
3333}
3334
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