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sette.sh in branches/2017/dev_r7663_ISOMIP_TEST_CASE/NEMOGCM/SETTE – NEMO

source: branches/2017/dev_r7663_ISOMIP_TEST_CASE/NEMOGCM/SETTE/sette.sh @ 7700

Last change on this file since 7700 was 7700, checked in by mathiot, 7 years ago

update makenemo to run ISOMIP correctly with sette.sh
  • Property svn:executable set to *
File size: 57.4 KB
RevLine 
[3520]1#!/bin/bash
[3708]2############################################################
[3520]3# Author : Simona Flavoni for NEMO
[4245]4# Contact: sflod@locean-ipsl.upmc.fr
5# 2013   : A.C. Coward added options for testing with XIOS in dettached mode
[3520]6#
7# sette.sh   : principal script of SET TEsts for NEMO (SETTE)
8# ----------------------------------------------------------------------
9# NEMO/SETTE , NEMO Consortium (2010)
10# Software governed by the CeCILL licence     (NEMOGCM/NEMO_CeCILL.txt)
11# ----------------------------------------------------------------------
12#
13#############################################################
[3532]14#set -x
[3520]15set -o posix
16#set -u
17#set -e
[4245]18# ===========
[3520]19# DESCRIPTION
20# ===========
21#
22# Variables to be checked by user:
23#
[4245]24# COMPILER          : name of compiler as defined in NEMOGCM/ARCH directory
25# BATCH_COMMAND_PAR :  name of the command for submitting parallel batch jobs
26# BATCH_COMMAND_SEQ :  name of the command for submitting sequential batch jobs 
27# INTERACT_FLAG     : flag to run in interactive mode "yes"
28#                           to run in batch mode "no"
29# MPIRUN_FLAG       : flag to run in parallel (MPI) "yes"
30#                           to run in sequential mode (NB_PROC = 1) "no"
31# USING_XIOS        : flag to control the activation of key_iomput
32#                      "yes" to compile using key_iomput and link to the external XIOS library
33#                      "no"  to compile without key_iomput and link to the old IOIPSL library
34# USING_MPMD        : flag to control the use of stand-alone IO servers
35#                     requires USING_XIOS="yes"
36#                      "yes" to run in MPMD (detached) mode with stand-alone IO servers
37#                      "no"  to run in SPMD (attached) mode without separate IO servers
38# NUM_XIOSERVERS    : number of stand-alone IO servers to employ
39#                     set to zero if USING_MPMD="no"
[3520]40#
41# Principal script is sette.sh, that calls
42#
[4245]43#  makenemo  : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
44#              and links to opa in ${CONFIG_NAME}/EXP00)
[3520]45#
46#  param.cfg : sets and loads following directories:
47#
[4245]48#   FORCING_DIR         : is the directory for forcing files (tarfile)
49#   INPUT_DIR           : is the directory for input files storing
50#   TMPDIR              : is the temporary directory (if needed)
[3520]51#   NEMO_VALIDATION_DIR : is the validation directory
52#
53#   (NOTE: this file is the same for all configrations to be tested with sette)
54#
[4245]55#   all_functions.sh : loads functions used by sette (note: new functions can be added here)
56#   set_namelist     : function declared in all_functions that sets namelist parameters
57#   post_test_tidyup : creates validation storage directory and copies required output files
58#                      (solver.stat and ocean.output) in it after execution of test.
[3520]59#
[4245]60#  VALIDATION tree is:
[3520]61#
62#   NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
63#
64#  prepare_exe_dir.sh : defines and creates directory where the test is executed
[4245]65#                       execution directory takes name of TEST_NAME defined for every test
66#                       in sette.sh. (each test in executed in its own directory)
[3520]67#
[4245]68#  prepare_job.sh     : to generate the script run_job.sh
[3520]69#
[4245]70#  fcm_job.sh         : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
71#                        see sette.sh and BATCH_TEMPLATE directory
[3520]72#
[4245]73#  NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
74#        can be found paths to the input tar file)
75#  NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
76#        directory
77#  NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
78#        remain in ${NEW_CONF}/EXP00
[3520]79#
[4245]80#  NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
81#        executed commands
[3520]82#
[4245]83#  NOTE: if sette.sh is stopped in output.sette there is written the last command
84#        executed by sette.sh
[3520]85#
[4245]86# example use: ./sette.sh
87#########################################################################################
[3520]88#
[4245]89# Compiler among those in NEMOGCM/ARCH
[7684]90COMPILER=XC40_METO
91export BATCH_COMMAND_PAR="qsub"
[4245]92export BATCH_COMMAND_SEQ=$BATCH_COMMAND_PAR
[4990]93export INTERACT_FLAG="no"
[4245]94export MPIRUN_FLAG="yes"
95export USING_XIOS="yes"
[3520]96#
[4245]97export DEL_KEYS="key_iomput"
98if [ ${USING_XIOS} == "yes" ] 
99 then
100   export DEL_KEYS=""
101fi
[3520]102#
[4245]103# Settings which control the use of stand alone servers (only relevant if using xios)
[3520]104#
[4245]105export USING_MPMD="no"
106export NUM_XIOSERVERS=4
107export JOB_PREFIX=batch-mpmd
[3520]108#
[4245]109if [ ${USING_MPMD} == "no" ] 
110 then
111   export NUM_XIOSERVERS=0
112   export JOB_PREFIX=batch
113fi
[3520]114#
115#
[4245]116if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no"]
117 then
118   echo "Incompatible choices. MPMD mode requires the XIOS server"
119   exit
120fi
[3520]121#
122
123# Directory to run the tests
124SETTE_DIR=$(cd $(dirname "$0"); pwd)
[6460]125MAIN_DIR=$(dirname $SETTE_DIR)
[7684]126CONFIG_DIR0=${MAIN_DIR}/CONFIG
[3520]127TOOLS_DIR=${MAIN_DIR}/TOOLS
128COMPIL_DIR=${TOOLS_DIR}/COMPILE
129
130CMP_NAM=${1:-$COMPILER}
131# Copy job_batch_COMPILER file for specific compiler into job_batch_template
132cd ${SETTE_DIR}
[4245]133cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template || exit
[4316]134# Description of configuration tested:
[7646]135# GYRE              :  1 &  2
136# ORCA2_LIM3        :  3 &  4
137# ORCA2_LIM3_PISCES :  5 &  6
138# ORCA2_OFF_PISCES  :  7 &  8
139# AMM12             :  9 & 10
140# SAS               : 11     fos SAS there is no solver so is useless to test REPRO
141# ISOMIP            : 12 & 13
142# ORCA2_LIM3_OBS    : 14
143# ORCA2_AGRIF_LIM   : 15 & 16
144#                     17 & 18
[4147]145
[7646]146for config in 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18
[5836]147
[3520]148do
149
[3680]150# TESTS FOR GYRE CONFIGURATION
[3520]151if [ ${config} -eq 1 ] ;  then
[3680]152    ## Restartability tests for GYRE
[3520]153    export TEST_NAME="LONG"
[7684]154    cd ${CONFIG_DIR0}
[4245]155    . ./makenemo -m ${CMP_NAM} -n GYRE_LONG -r GYRE -j 8 del_key ${DEL_KEYS}
[3520]156    cd ${SETTE_DIR}
[4252]157    . ./param.cfg
158    . ./all_functions.sh
159    . ./prepare_exe_dir.sh
[3520]160    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]161    NPROC=32
[4245]162    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]163    cd ${EXE_DIR} 
164    set_namelist namelist_cfg cn_exp \"GYRE_LONG\"
165    set_namelist namelist_cfg nn_it000 1
166    set_namelist namelist_cfg nn_itend 120
167    set_namelist namelist_cfg nn_stock 60
168    set_namelist namelist_cfg ln_clobber .true.
[7646]169    set_namelist namelist_cfg ln_linssh .true.
170    set_namelist namelist_cfg ln_read_cfg .false.
[4318]171    set_namelist namelist_cfg nn_fwb 0
[7646]172    set_namelist namelist_cfg jpni 4
173    set_namelist namelist_cfg jpnj 8
174    set_namelist namelist_cfg jpnij 32
[4245]175    if [ ${USING_MPMD} == "yes" ] ; then
176       set_xio_using_server iodef.xml true
177    else
178       set_xio_using_server iodef.xml false
179    fi
180    cd ${SETTE_DIR}
181    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]182
183    cd ${SETTE_DIR}
184    export TEST_NAME="SHORT"
[4252]185    . ./prepare_exe_dir.sh
[3520]186    cd ${EXE_DIR}
[4147]187    set_namelist namelist_cfg cn_exp \"GYRE_SHORT\"
188    set_namelist namelist_cfg nn_it000 61
189    set_namelist namelist_cfg nn_itend 120
190    set_namelist namelist_cfg nn_stock 60
191    set_namelist namelist_cfg ln_rstart .true.
192    set_namelist namelist_cfg nn_rstctl 2
193    set_namelist namelist_cfg ln_clobber .true.
[7646]194    set_namelist namelist_cfg ln_linssh .true.
195    set_namelist namelist_cfg ln_read_cfg .false.
[4316]196    set_namelist namelist_cfg nn_fwb 0
[7646]197    set_namelist namelist_cfg jpni 4
198    set_namelist namelist_cfg jpnj 8
199    set_namelist namelist_cfg jpnij 32
[4147]200    set_namelist namelist_cfg cn_ocerst_in \"GYRE_LONG_00000060_restart\"
[4245]201    if [ ${USING_MPMD} == "yes" ] ; then
202       set_xio_using_server iodef.xml true
203    else
204       set_xio_using_server iodef.xml false
205    fi
[3537]206    for (( i=1; i<=$NPROC; i++)) ; do
207        L_NPROC=$(( $i - 1 ))
208        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[3680]209        ln -sf ../LONG/GYRE_LONG_00000060_restart_${L_NPROC}.nc .
[3537]210    done
[4245]211    if [ ${USING_MPMD} == "yes" ] ; then
212       set_xio_using_server iodef.xml true
213    else
214       set_xio_using_server iodef.xml false
215    fi
[3520]216    cd ${SETTE_DIR}
[4245]217    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]218    cd ${SETTE_DIR}
[3532]219    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]220fi
221
222if [ ${config} -eq 2 ] ;  then
[3680]223    ## Reproducibility tests for GYRE
[7646]224    export TEST_NAME="REPRO_4_8"
[7684]225    cd ${CONFIG_DIR0}
[7646]226    . ./makenemo -m ${CMP_NAM} -n GYRE_32 -r GYRE -j 8 del_key ${DEL_KEYS}
[3520]227    cd ${SETTE_DIR}
[4252]228    . ./param.cfg
229    . ./all_functions.sh
230    . ./prepare_exe_dir.sh
[3520]231    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]232    NPROC=32
[4245]233    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]234    cd ${EXE_DIR}
[7646]235    set_namelist namelist_cfg cn_exp \"GYRE_48\"
[4147]236    set_namelist namelist_cfg nn_it000 1
237    set_namelist namelist_cfg nn_itend 60
238    set_namelist namelist_cfg nn_fwb 0
239    set_namelist namelist_cfg ln_ctl .false.
240    set_namelist namelist_cfg ln_clobber .true.
[7646]241    set_namelist namelist_cfg ln_linssh .true.
242    set_namelist namelist_cfg ln_read_cfg .false.
243    set_namelist namelist_cfg jpni 4
244    set_namelist namelist_cfg jpnj 8
245    set_namelist namelist_cfg jpnij 32
[4245]246    if [ ${USING_MPMD} == "yes" ] ; then
247       set_xio_using_server iodef.xml true
248    else
249       set_xio_using_server iodef.xml false
250    fi
[3520]251    cd ${SETTE_DIR}
[4245]252    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]253    cd ${SETTE_DIR}
254    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
255
256    cd ${SETTE_DIR}
[7646]257    export TEST_NAME="REPRO_8_4"
[4252]258    . ./prepare_exe_dir.sh
[3680]259    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]260    NPROC=32
[4245]261    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]262    cd ${EXE_DIR}
[7646]263    set_namelist namelist_cfg cn_exp \"GYRE_84\"
[4147]264    set_namelist namelist_cfg nn_it000 1
265    set_namelist namelist_cfg nn_itend 60
266    set_namelist namelist_cfg nn_fwb 0
267    set_namelist namelist_cfg ln_ctl .false.
268    set_namelist namelist_cfg ln_clobber .true.
[7646]269    set_namelist namelist_cfg ln_linssh .true.
270    set_namelist namelist_cfg ln_read_cfg .false.
271    set_namelist namelist_cfg jpni 8
272    set_namelist namelist_cfg jpnj 4
273    set_namelist namelist_cfg jpnij 32
[4245]274    if [ ${USING_MPMD} == "yes" ] ; then
275       set_xio_using_server iodef.xml true
276    else
277       set_xio_using_server iodef.xml false
278    fi
[3520]279    cd ${SETTE_DIR}
[4245]280    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]281    cd ${SETTE_DIR}
282    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3532]283
[3520]284fi
285
[7646]286# TESTS FOR ORCA2_LIM3 CONFIGURATION
[3520]287if [ ${config} -eq 3 ] ;  then
[7646]288    ## Restartability tests for ORCA2_LIM3
[3520]289    export TEST_NAME="LONG"
[7684]290    cd ${CONFIG_DIR0}
[7646]291    . ./makenemo -m ${CMP_NAM} -n ORCA2LIM3_LONG -r ORCA2_LIM3 -j 8 del_key ${DEL_KEYS}
[3520]292    cd ${SETTE_DIR}
[4252]293    . ./param.cfg
294    . ./all_functions.sh
295    . ./prepare_exe_dir.sh
[3520]296    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]297    NPROC=4
[4245]298    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]299    cd ${EXE_DIR}
[7646]300    set_namelist namelist_cfg cn_exp \"O2L3_LONG\"
[4147]301    set_namelist namelist_cfg nn_it000 1
302    set_namelist namelist_cfg nn_itend 150
303    set_namelist namelist_cfg nn_stock 75
304    set_namelist namelist_cfg ln_clobber .true.
[7646]305    set_namelist namelist_cfg ln_read_cfg .true.
306    set_namelist namelist_cfg ln_linssh .false.
307    set_namelist namelist_cfg ln_icebergs .true.
[4316]308    set_namelist namelist_cfg nn_fwb 0
[4147]309    set_namelist namelist_cfg jpni 2
[7646]310    set_namelist namelist_cfg jpnj 2
311    set_namelist namelist_cfg jpnij 4
312    if [ ${USING_MPMD} == "yes" ] ; then
313       set_xio_using_server iodef.xml true
314    else
315       set_xio_using_server iodef.xml false
316    fi
317    cd ${SETTE_DIR}
318    . ./prepare_job.sh input_ORCA2_LIM3.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
319
320    cd ${SETTE_DIR}
321    export TEST_NAME="SHORT"
322    . ./prepare_exe_dir.sh
323    cd ${EXE_DIR}
324    set_namelist namelist_cfg cn_exp \"O2L3_SHORT\"
325    set_namelist namelist_cfg nn_it000 76
326    set_namelist namelist_cfg nn_itend 150
327    set_namelist namelist_cfg nn_stock 75
328    set_namelist namelist_cfg ln_rstart .true.
329    set_namelist namelist_cfg nn_rstctl 2
330    set_namelist namelist_cfg ln_clobber .true.
331    set_namelist namelist_cfg ln_read_cfg .true.
332    set_namelist namelist_cfg ln_linssh .false.
333    set_namelist namelist_cfg ln_icebergs .true.
334    set_namelist namelist_cfg nn_fwb 0
335    set_namelist namelist_cfg jpni 2
336    set_namelist namelist_cfg jpnj 2
337    set_namelist namelist_cfg jpnij 4
338    set_namelist namelist_cfg cn_ocerst_in \"O2L3_LONG_00000075_restart\"
339    set_namelist namelist_ice_cfg cn_icerst_in \"O2L3_LONG_00000075_restart_ice\"
340    for (( i=1; i<=$NPROC; i++)) ; do
341        L_NPROC=$(( $i - 1 ))
342        L_NPROC=`printf "%04d\n" ${L_NPROC}`
343        ln -sf ../LONG/O2L3_LONG_00000075_restart_${L_NPROC}.nc .
344        ln -sf ../LONG/O2L3_LONG_00000075_restart_ice_${L_NPROC}.nc .
345        ln -sf ../LONG/O2L3_LONG_icebergs_00000075_restart_${L_NPROC}.nc O2L3_LONG_00000075_restart_icebergs_${L_NPROC}.nc
346    done
347    if [ ${USING_MPMD} == "yes" ] ; then
348       set_xio_using_server iodef.xml true
349    else
350       set_xio_using_server iodef.xml false
351    fi
352    cd ${SETTE_DIR}
353    . ./prepare_job.sh input_ORCA2_LIM3.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
354    cd ${SETTE_DIR}
355    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
356fi
357
358if [ ${config} -eq 4 ] ;  then
359    ## Reproducibility tests for ORCA2_LIM3
360    export TEST_NAME="REPRO_8_4"
[7684]361    cd ${CONFIG_DIR0}
[7646]362    . ./makenemo -m ${CMP_NAM} -n ORCA2LIM3_32 -r ORCA2_LIM3 -j 8 del_key ${DEL_KEYS}
363    cd ${SETTE_DIR}
364    . ./param.cfg
365    . ./all_functions.sh
366    . ./prepare_exe_dir.sh
367    JOB_FILE=${EXE_DIR}/run_job.sh
368    NPROC=32
369    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
370    cd ${EXE_DIR}
371    set_namelist namelist_cfg nn_it000 1
372    set_namelist namelist_cfg nn_itend 75
373    set_namelist namelist_cfg nn_fwb 0
374    set_namelist namelist_cfg ln_ctl .false.
375    set_namelist namelist_cfg ln_clobber .true.
376    set_namelist namelist_cfg ln_read_cfg .true.
377    set_namelist namelist_cfg ln_linssh .false.
378    set_namelist namelist_cfg ln_icebergs .true.
379    set_namelist namelist_cfg jpni 8
[5836]380    set_namelist namelist_cfg jpnj 4
[7646]381    set_namelist namelist_cfg jpnij 32
382    if [ ${USING_MPMD} == "yes" ] ; then
383       set_xio_using_server iodef.xml true
384    else
385       set_xio_using_server iodef.xml false
386    fi
387    cd ${SETTE_DIR}
388    . ./prepare_job.sh input_ORCA2_LIM3.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
389    cd ${SETTE_DIR}
390    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
391
392
393    cd ${SETTE_DIR}
394    export TEST_NAME="REPRO_4_8"
395    . ./prepare_exe_dir.sh
396    JOB_FILE=${EXE_DIR}/run_job.sh
397    NPROC=32
398    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
399    cd ${EXE_DIR}
400    set_namelist namelist_cfg nn_it000 1
401    set_namelist namelist_cfg nn_itend 75
402    set_namelist namelist_cfg ln_clobber .true.
403    set_namelist namelist_cfg ln_read_cfg .true.
404    set_namelist namelist_cfg ln_linssh .false.
405    set_namelist namelist_cfg ln_icebergs .true.
406    set_namelist namelist_cfg nn_fwb 0
407    set_namelist namelist_cfg jpni 4
408    set_namelist namelist_cfg jpnj 8
409    set_namelist namelist_cfg jpnij 32
410    if [ ${USING_MPMD} == "yes" ] ; then
411       set_xio_using_server iodef.xml true
412    else
413       set_xio_using_server iodef.xml false
414    fi
415
416    cd ${SETTE_DIR}
417    . ./prepare_job.sh input_ORCA2_LIM3.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
418    cd ${SETTE_DIR}
419    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
420fi
421
422# TESTS FOR ORCA2_LIM3_PISCES CONFIGURATION
423if [ ${config} -eq 5 ] ;  then
424    ## Restartability tests for ORCA2_LIM3_PISCES
425    export TEST_NAME="LONG"
[7684]426    cd ${CONFIG_DIR0}
[7646]427    . ./makenemo -m ${CMP_NAM} -n ORCA2LIM3PIS_LONG -r ORCA2_LIM3_PISCES -j 8 del_key ${DEL_KEYS}
428    cd ${SETTE_DIR}
429    . ./param.cfg
430    . ./all_functions.sh
431    . ./prepare_exe_dir.sh
432    JOB_FILE=${EXE_DIR}/run_job.sh
433    NPROC=32
434    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
435    cd ${EXE_DIR}
436    set_namelist namelist_cfg cn_exp \"O2L3P_LONG\"
437    set_namelist namelist_cfg nn_it000 1
438    set_namelist namelist_cfg nn_itend 150
439    set_namelist namelist_cfg nn_stock 75
440    set_namelist namelist_cfg ln_clobber .true.
441    set_namelist namelist_cfg ln_read_cfg .true.
442    set_namelist namelist_cfg ln_linssh .false.
443    set_namelist namelist_cfg nn_fwb 0
444    set_namelist namelist_cfg jpni 4
445    set_namelist namelist_cfg jpnj 8
446    set_namelist namelist_cfg jpnij 32
[4147]447    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]448    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
449    # if not you need input files, and for tests is not necessary
[4147]450    set_namelist namelist_pisces_cfg ln_presatm .false.
451    set_namelist namelist_pisces_cfg ln_varpar .false.
452    set_namelist namelist_pisces_cfg ln_dust .false.
453    set_namelist namelist_pisces_cfg ln_solub .false.
454    set_namelist namelist_pisces_cfg ln_river .false.
455    set_namelist namelist_pisces_cfg ln_ndepo .false.
456    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]457    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]458    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4245]459    if [ ${USING_MPMD} == "yes" ] ; then
460       set_xio_using_server iodef.xml true
461    else
462       set_xio_using_server iodef.xml false
463    fi
[3520]464    cd ${SETTE_DIR}
[7646]465    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3532]466   
467    cd ${SETTE_DIR}
[3520]468    export TEST_NAME="SHORT"
[4252]469    . ./prepare_exe_dir.sh
[3520]470    cd ${EXE_DIR}
[7646]471    set_namelist namelist_cfg cn_exp \"O2L3P_SHORT\"
[4147]472    set_namelist namelist_cfg nn_it000 76
473    set_namelist namelist_cfg nn_itend 150
474    set_namelist namelist_cfg nn_stock 75
475    set_namelist namelist_cfg ln_rstart .true.
476    set_namelist namelist_cfg nn_rstctl 2
477    set_namelist namelist_cfg ln_clobber .true.
[7646]478    set_namelist namelist_cfg ln_read_cfg .true.
479    set_namelist namelist_cfg ln_linssh .false.
[4316]480    set_namelist namelist_cfg nn_fwb 0
[7646]481    set_namelist namelist_cfg jpni 4
482    set_namelist namelist_cfg jpnj 8
483    set_namelist namelist_cfg jpnij 32
[4147]484    set_namelist namelist_top_cfg ln_rsttr .true.
485    set_namelist namelist_top_cfg nn_rsttr 2
[7646]486    set_namelist namelist_cfg cn_ocerst_in \"O2L3P_LONG_00000075_restart\"
487    set_namelist namelist_ice_cfg cn_icerst_in \"O2L3P_LONG_00000075_restart_ice\"
488    set_namelist namelist_top_cfg cn_trcrst_in \"O2L3P_LONG_00000075_restart_trc\"
[3520]489    # put ln_ironsed, ln_river, ln_ndepo, ln_dust
490    # if not you need input files, and for tests is not necessary
[4147]491    set_namelist namelist_pisces_cfg ln_presatm .false.
492    set_namelist namelist_pisces_cfg ln_varpar .false.
493    set_namelist namelist_pisces_cfg ln_dust .false.
494    set_namelist namelist_pisces_cfg ln_solub .false.
495    set_namelist namelist_pisces_cfg ln_river .false.
496    set_namelist namelist_pisces_cfg ln_ndepo .false.
497    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]498    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]499    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]500    # put ln_pisdmp to false : no restoring to global mean value
[4147]501    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[3537]502    for (( i=1; i<=$NPROC; i++)) ; do
503        L_NPROC=$(( $i - 1 ))
504        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[7646]505        ln -sf ../LONG/O2L3P_LONG_00000075_restart_${L_NPROC}.nc .
506        ln -sf ../LONG/O2L3P_LONG_00000075_restart_trc_${L_NPROC}.nc .
507        ln -sf ../LONG/O2L3P_LONG_00000075_restart_ice_${L_NPROC}.nc .
[3537]508    done
[4245]509    if [ ${USING_MPMD} == "yes" ] ; then
510       set_xio_using_server iodef.xml true
511    else
512       set_xio_using_server iodef.xml false
513    fi
[3520]514    cd ${SETTE_DIR}
[7646]515    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]516    cd ${SETTE_DIR}
[3532]517    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]518fi
519
[7646]520if [ ${config} -eq 6 ] ;  then
521    ## Reproducibility tests for ORCA2_LIM3_PISCES
522    export TEST_NAME="REPRO_4_8"
[7684]523    cd ${CONFIG_DIR0}
[7646]524    . ./makenemo -m ${CMP_NAM} -n ORCA2LIM3PIS_32 -r ORCA2_LIM3_PISCES -j 8 del_key ${DEL_KEYS}
[3520]525    cd ${SETTE_DIR}
[4252]526    . ./param.cfg
527    . ./all_functions.sh
528    . ./prepare_exe_dir.sh
[3520]529    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]530    NPROC=32
[4245]531    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]532    cd ${EXE_DIR}
[4147]533    set_namelist namelist_cfg nn_it000 1
534    set_namelist namelist_cfg nn_itend 75
535    set_namelist namelist_cfg nn_fwb 0
536    set_namelist namelist_cfg ln_ctl .false.
537    set_namelist namelist_cfg ln_clobber .true.
[7646]538    set_namelist namelist_cfg ln_read_cfg .true.
539    set_namelist namelist_cfg ln_linssh .false.
[4147]540    set_namelist namelist_cfg jpni 4
[7646]541    set_namelist namelist_cfg jpnj 8
542    set_namelist namelist_cfg jpnij 32
[4147]543    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]544    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
545    # if not you need input files, and for tests is not necessary
[4147]546    set_namelist namelist_pisces_cfg ln_presatm .false.
547    set_namelist namelist_pisces_cfg ln_varpar .false.
548    set_namelist namelist_pisces_cfg ln_dust .false.
549    set_namelist namelist_pisces_cfg ln_solub .false.
550    set_namelist namelist_pisces_cfg ln_river .false.
551    set_namelist namelist_pisces_cfg ln_ndepo .false.
552    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]553    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]554    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]555    # put ln_pisdmp to false : no restoring to global mean value
[4147]556    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]557    if [ ${USING_MPMD} == "yes" ] ; then
558       set_xio_using_server iodef.xml true
559    else
560       set_xio_using_server iodef.xml false
561    fi
[3520]562    cd ${SETTE_DIR}
[7646]563    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]564    cd ${SETTE_DIR}
[3532]565    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]566
567    cd ${SETTE_DIR}
[7646]568    export TEST_NAME="REPRO_8_4"
[4252]569    . ./prepare_exe_dir.sh
[3680]570    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]571    NPROC=32
[4245]572    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]573    cd ${EXE_DIR}
[4147]574    set_namelist namelist_cfg nn_it000 1
575    set_namelist namelist_cfg nn_itend 75
576    set_namelist namelist_cfg ln_clobber .true.
[7646]577    set_namelist namelist_cfg ln_read_cfg .true.
578    set_namelist namelist_cfg ln_linssh .false.
[4316]579    set_namelist namelist_cfg nn_fwb 0
[7646]580    set_namelist namelist_cfg jpni 8
581    set_namelist namelist_cfg jpnj 4
582    set_namelist namelist_cfg jpnij 32
[4147]583    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]584    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
585    # if not you need input files, and for tests is not necessary
[4147]586    set_namelist namelist_pisces_cfg ln_presatm .false.
587    set_namelist namelist_pisces_cfg ln_varpar .false.
588    set_namelist namelist_pisces_cfg ln_dust .false.
589    set_namelist namelist_pisces_cfg ln_solub .false.
590    set_namelist namelist_pisces_cfg ln_river .false.
591    set_namelist namelist_pisces_cfg ln_ndepo .false.
592    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]593    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]594    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]595    # put ln_pisdmp to false : no restoring to global mean value
[4147]596    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]597    if [ ${USING_MPMD} == "yes" ] ; then
598       set_xio_using_server iodef.xml true
599    else
600       set_xio_using_server iodef.xml false
601    fi
[3520]602    cd ${SETTE_DIR}
[7646]603    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]604    cd ${SETTE_DIR}
605    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
606fi
607
608# TESTS FOR ORCA2_OFF_PISCES CONFIGURATION
[7646]609if [ ${config} -eq 7 ] ;  then
[3520]610    ## Restartability tests for ORCA2_OFF_PISCES
611    export TEST_NAME="LONG"
[7684]612    cd ${CONFIG_DIR0}
[7646]613    . ./makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_LONG -r ORCA2_OFF_PISCES -j 8 del_key ${DEL_KEYS}
[3520]614    cd ${SETTE_DIR}
[4252]615    . ./param.cfg
616    . ./all_functions.sh
617    . ./prepare_exe_dir.sh
[3520]618    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]619    NPROC=32
[4245]620    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]621    cd ${EXE_DIR}
[4147]622    set_namelist namelist_cfg cn_exp \"OFFP_LONG\"
623    set_namelist namelist_cfg nn_it000 1
624    set_namelist namelist_cfg nn_itend 40
625    set_namelist namelist_cfg nn_stock 20
626    set_namelist namelist_cfg ln_clobber .true.
[7646]627    set_namelist namelist_cfg ln_read_cfg .true.
628    set_namelist namelist_cfg ln_linssh .true.
629    set_namelist namelist_cfg jpni 4
630    set_namelist namelist_cfg jpnj 8
631    set_namelist namelist_cfg jpnij 32
[4147]632    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]633    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
634    # if not you need input files, and for tests is not necessary
[4147]635    set_namelist namelist_pisces_cfg ln_presatm .false.
636    set_namelist namelist_pisces_cfg ln_varpar .false.
637    set_namelist namelist_pisces_cfg ln_dust .false.
638    set_namelist namelist_pisces_cfg ln_solub .false.
639    set_namelist namelist_pisces_cfg ln_river .false.
640    set_namelist namelist_pisces_cfg ln_ndepo .false.
641    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]642    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]643    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]644    # put ln_pisdmp to false : no restoring to global mean value
[4147]645    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]646    if [ ${USING_MPMD} == "yes" ] ; then
647       set_xio_using_server iodef.xml true
648    else
649       set_xio_using_server iodef.xml false
650    fi
[3520]651    cd ${SETTE_DIR}
[4245]652    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]653   
654    cd ${SETTE_DIR}
655    export TEST_NAME="SHORT"
[4252]656    . ./prepare_exe_dir.sh
[3520]657    cd ${EXE_DIR}
[4147]658    set_namelist namelist_cfg cn_exp \"OFFP_SHORT\"
659    set_namelist namelist_cfg nn_it000 21
660    set_namelist namelist_cfg nn_itend 40
661    set_namelist namelist_cfg nn_stock 20
662    set_namelist namelist_cfg ln_clobber .true.
[7646]663    set_namelist namelist_cfg ln_read_cfg .true.
664    set_namelist namelist_cfg ln_linssh .true.
665    set_namelist namelist_cfg jpni 4
666    set_namelist namelist_cfg jpnj 8
667    set_namelist namelist_cfg jpnij 32
[4147]668    set_namelist namelist_top_cfg ln_rsttr .true.
669    set_namelist namelist_top_cfg nn_rsttr 2
670    set_namelist namelist_top_cfg cn_trcrst_in \"OFFP_LONG_00000020_restart_trc\"
[3537]671    for (( i=1; i<=$NPROC; i++)) ; do
672        L_NPROC=$(( $i - 1 ))
673        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[3555]674        ln -sf ../LONG/OFFP_LONG_00000020_restart_trc_${L_NPROC}.nc .
[3537]675    done
[3520]676    # put ln_ironsed, ln_river, ln_ndepo, ln_dust
677    # if not you need input files, and for tests is not necessary
[4147]678    set_namelist namelist_pisces_cfg ln_presatm .false.
679    set_namelist namelist_pisces_cfg ln_varpar .false.
680    set_namelist namelist_pisces_cfg ln_dust .false.
681    set_namelist namelist_pisces_cfg ln_solub .false.
682    set_namelist namelist_pisces_cfg ln_river .false.
683    set_namelist namelist_pisces_cfg ln_ndepo .false.
684    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]685    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]686    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]687    # put ln_pisdmp to false : no restoring to global mean value
[4147]688    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]689    if [ ${USING_MPMD} == "yes" ] ; then
690       set_xio_using_server iodef.xml true
691    else
692       set_xio_using_server iodef.xml false
693    fi
[3520]694    cd ${SETTE_DIR}
[4245]695    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME}  ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]696    cd ${SETTE_DIR}
697    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
698fi
699
[7646]700if [ ${config} -eq 8 ] ;  then
[3680]701    ## Reproducibility tests for ORCA2_OFF_PISCES
[7646]702    export TEST_NAME="REPRO_4_8"
[7684]703    cd ${CONFIG_DIR0}
[7646]704    . ./makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_32 -r ORCA2_OFF_PISCES -j 8 del_key ${DEL_KEYS}
[3520]705    cd ${SETTE_DIR}
[4252]706    . ./param.cfg
707    . ./all_functions.sh
708    . ./prepare_exe_dir.sh
[3520]709    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]710    NPROC=32
[4245]711    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]712    cd ${EXE_DIR}
[4147]713    set_namelist namelist_cfg nn_it000 1
714    set_namelist namelist_cfg nn_itend 40
715    set_namelist namelist_cfg ln_ctl .false.
716    set_namelist namelist_cfg ln_clobber .true.
[7646]717    set_namelist namelist_cfg ln_read_cfg .true.
718    set_namelist namelist_cfg ln_linssh .true.
[4147]719    set_namelist namelist_cfg jpni 4
[7646]720    set_namelist namelist_cfg jpnj 8
721    set_namelist namelist_cfg jpnij 32
[4147]722    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]723    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
724    # if not you need input files, and for tests is not necessary
[4147]725    set_namelist namelist_pisces_cfg ln_presatm .false.
726    set_namelist namelist_pisces_cfg ln_varpar .false.
727    set_namelist namelist_pisces_cfg ln_dust .false.
728    set_namelist namelist_pisces_cfg ln_solub .false.
729    set_namelist namelist_pisces_cfg ln_river .false.
730    set_namelist namelist_pisces_cfg ln_ndepo .false.
731    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]732    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]733    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]734    # put ln_pisdmp to false : no restoring to global mean value
[4147]735    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]736    if [ ${USING_MPMD} == "yes" ] ; then
737       set_xio_using_server iodef.xml true
738    else
739       set_xio_using_server iodef.xml false
740    fi
[3520]741    cd ${SETTE_DIR}
[4245]742    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]743    cd ${SETTE_DIR}
[3532]744    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]745
746    cd ${SETTE_DIR}
[7646]747    export TEST_NAME="REPRO_8_4"
[4252]748    . ./prepare_exe_dir.sh
[3680]749    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]750    NPROC=32
[4245]751    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]752    cd ${EXE_DIR}
[4147]753    set_namelist namelist_cfg nn_it000 1
754    set_namelist namelist_cfg nn_itend 40
755    set_namelist namelist_cfg ln_ctl .false.
756    set_namelist namelist_cfg ln_clobber .true.
[7646]757    set_namelist namelist_cfg ln_read_cfg .true.
758    set_namelist namelist_cfg ln_linssh .true.
759    set_namelist namelist_cfg jpni 8
760    set_namelist namelist_cfg jpnj 4
761    set_namelist namelist_cfg jpnij 32
[4147]762    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]763    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
764    # if not you need input files, and for tests is not necessary
[4147]765    set_namelist namelist_pisces_cfg ln_presatm .false.
766    set_namelist namelist_pisces_cfg ln_varpar .false.
767    set_namelist namelist_pisces_cfg ln_dust .false.
768    set_namelist namelist_pisces_cfg ln_solub .false.
769    set_namelist namelist_pisces_cfg ln_river .false.
770    set_namelist namelist_pisces_cfg ln_ndepo .false.
771    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]772    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]773    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]774    # put ln_pisdmp to false : no restoring to global mean value
[4147]775    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]776    if [ ${USING_MPMD} == "yes" ] ; then
777       set_xio_using_server iodef.xml true
778    else
779       set_xio_using_server iodef.xml false
780    fi
[3520]781    cd ${SETTE_DIR}
[4245]782    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]783    cd ${SETTE_DIR}
784    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
785fi
786
[3680]787# TESTS FOR AMM12 CONFIGURATION
[4796]788if [ ${config} -eq 9 ] ;  then
[3532]789    ## Restartability tests for AMM12
790    export TEST_NAME="LONG"
[7684]791    cd ${CONFIG_DIR0}
[4245]792    . ./makenemo -m ${CMP_NAM} -n AMM12_LONG -r AMM12 -j 8 add_key "key_tide" del_key ${DEL_KEYS}
[3520]793    cd ${SETTE_DIR}
[4252]794    . ./param.cfg
795    . ./all_functions.sh
796    . ./prepare_exe_dir.sh
[3520]797    JOB_FILE=${EXE_DIR}/run_job.sh
798    NPROC=32
[4245]799    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]800    cd ${EXE_DIR}
[4147]801    set_namelist namelist_cfg nn_it000 1
[4252]802    set_namelist namelist_cfg nn_itend 576
803    set_namelist namelist_cfg nn_stock 288
[4147]804    set_namelist namelist_cfg nn_fwb 0
805    set_namelist namelist_cfg ln_ctl .false.
806    set_namelist namelist_cfg ln_clobber .true.
[7646]807    set_namelist namelist_cfg ln_read_cfg .true.
808    set_namelist namelist_cfg ln_linssh .false.
809    set_namelist namelist_cfg jpni 4
810    set_namelist namelist_cfg jpnj 8
[4147]811    set_namelist namelist_cfg jpnij 32
[4245]812    if [ ${USING_MPMD} == "yes" ] ; then
813       set_xio_using_server iodef.xml true
814    else
815       set_xio_using_server iodef.xml false
816    fi
[3520]817    cd ${SETTE_DIR}
[4245]818    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]819
820    cd ${SETTE_DIR}
[3532]821    export TEST_NAME="SHORT"
[4379]822    . ./prepare_exe_dir.sh
[3520]823    cd ${EXE_DIR}
[4252]824    set_namelist namelist_cfg nn_it000 289
825    set_namelist namelist_cfg nn_itend 576
[4147]826    set_namelist namelist_cfg nn_fwb 0
827    set_namelist namelist_cfg ln_ctl .false.
828    set_namelist namelist_cfg ln_clobber .true.
[7646]829    set_namelist namelist_cfg ln_read_cfg .true.
830    set_namelist namelist_cfg ln_linssh .false.
831    set_namelist namelist_cfg jpni 4
832    set_namelist namelist_cfg jpnj 8
[4147]833    set_namelist namelist_cfg jpnij 32
834    set_namelist namelist_cfg ln_rstart .true.
835    set_namelist namelist_cfg nn_rstctl 2
[4252]836    set_namelist namelist_cfg cn_ocerst_in \"AMM12_00000288_restart_oce_out\"
837    set_namelist namelist_cfg nn_date0 20120102
[3537]838    for (( i=1; i<=$NPROC; i++)) ; do
839        L_NPROC=$(( $i - 1 ))
840        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[4252]841        ln -sf ../LONG/AMM12_00000288_restart_oce_out_${L_NPROC}.nc .
[3537]842    done
[4245]843    if [ ${USING_MPMD} == "yes" ] ; then
844       set_xio_using_server iodef.xml true
845    else
846       set_xio_using_server iodef.xml false
847    fi
[3520]848    cd ${SETTE_DIR}
[4245]849    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]850    cd ${SETTE_DIR}
[3532]851    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]852fi
853
[4796]854if [ ${config} -eq 10 ] ;  then
[3680]855## Reproducibility tests for AMM12
856    export TEST_NAME="REPRO_8_4"
[7684]857    cd ${CONFIG_DIR0}
[7646]858    . ./makenemo -m ${CMP_NAM} -n AMM12_32 -r AMM12 -j 8 del_key ${DEL_KEYS}
[3520]859    cd ${SETTE_DIR}
[4252]860    . ./param.cfg
861    . ./all_functions.sh
862    . ./prepare_exe_dir.sh
[3520]863    JOB_FILE=${EXE_DIR}/run_job.sh
864    NPROC=32
[4245]865    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]866    cd ${EXE_DIR}
[4147]867    set_namelist namelist_cfg nn_it000 1
868    set_namelist namelist_cfg nn_itend 576
869    set_namelist namelist_cfg nn_fwb 0
870    set_namelist namelist_cfg ln_ctl .false.
871    set_namelist namelist_cfg ln_clobber .true.
[7646]872    set_namelist namelist_cfg ln_read_cfg .true.
873    set_namelist namelist_cfg ln_linssh .false.
[4147]874    set_namelist namelist_cfg jpni 8
875    set_namelist namelist_cfg jpnj 4
876    set_namelist namelist_cfg jpnij 32
[4245]877    if [ ${USING_MPMD} == "yes" ] ; then
878       set_xio_using_server iodef.xml true
879    else
880       set_xio_using_server iodef.xml false
881    fi
[3520]882    cd ${SETTE_DIR}
[4245]883    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]884    cd ${SETTE_DIR}
885    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
886
887    cd ${SETTE_DIR}
[3680]888    export TEST_NAME="REPRO_4_8"
[4252]889    . ./prepare_exe_dir.sh
[5478]890    JOB_FILE=${EXE_DIR}/run_job.sh
891    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]892    cd ${EXE_DIR}
[4147]893    set_namelist namelist_cfg nn_it000 1
894    set_namelist namelist_cfg nn_itend 576
895    set_namelist namelist_cfg nn_fwb 0
896    set_namelist namelist_cfg ln_ctl .false.
897    set_namelist namelist_cfg ln_clobber .true.
[7646]898    set_namelist namelist_cfg ln_read_cfg .true.
899    set_namelist namelist_cfg ln_linssh .false.
[4147]900    set_namelist namelist_cfg jpni 4
901    set_namelist namelist_cfg jpnj 8
902    set_namelist namelist_cfg jpnij 32
[4245]903    if [ ${USING_MPMD} == "yes" ] ; then
904       set_xio_using_server iodef.xml true
905    else
906       set_xio_using_server iodef.xml false
907    fi
[3520]908    cd ${SETTE_DIR}
[4245]909    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]910    cd ${SETTE_DIR}
[3532]911    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]912fi
913
914
[7646]915# TESTS FOR ORCA2_SAS_LIM3 CONFIGURATION
[4796]916if [ ${config} -eq 11 ] ;  then
[4147]917    ## Restartability tests for SAS
918    export TEST_NAME="LONG"
[7684]919    cd ${CONFIG_DIR0}
[7646]920    . ./makenemo -m ${CMP_NAM} -n SAS_LONG -r ORCA2_SAS_LIM3 -j 8 del_key ${DEL_KEYS}
[4147]921    cd ${SETTE_DIR}
[4252]922    . ./param.cfg
923    . ./all_functions.sh
924    . ./prepare_exe_dir.sh
[4147]925    JOB_FILE=${EXE_DIR}/run_job.sh
926    NPROC=32
[7646]927    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]928    cd ${EXE_DIR}
929    set_namelist namelist_cfg cn_exp \"SAS\"
930    set_namelist namelist_cfg nn_it000 1
931    set_namelist namelist_cfg nn_itend 100
932    set_namelist namelist_cfg nn_stock 50
933    set_namelist namelist_cfg ln_ctl .false.
934    set_namelist namelist_cfg ln_clobber .true.
[7646]935    set_namelist namelist_cfg ln_read_cfg .true.
936    set_namelist namelist_cfg ln_linssh .true.
[4316]937    set_namelist namelist_cfg nn_fwb 0
[7646]938    set_namelist namelist_cfg jpni 4
939    set_namelist namelist_cfg jpnj 8
[4147]940    set_namelist namelist_cfg jpnij 32
[4245]941    if [ ${USING_MPMD} == "yes" ] ; then
942       set_xio_using_server iodef.xml true
943    else
944       set_xio_using_server iodef.xml false
945    fi
[4147]946    cd ${SETTE_DIR}
[4245]947    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4147]948
949    cd ${SETTE_DIR}
950    export TEST_NAME="SHORT"
[4252]951    . ./prepare_exe_dir.sh
[4147]952    cd ${EXE_DIR}
953    set_namelist namelist_cfg cn_exp \"SAS\"
954    set_namelist namelist_cfg nn_it000 51
955    set_namelist namelist_cfg nn_itend 100
956    set_namelist namelist_cfg ln_ctl .false.
957    set_namelist namelist_cfg ln_clobber .true.
[7646]958    set_namelist namelist_cfg ln_read_cfg .true.
959    set_namelist namelist_cfg ln_linssh .true.
[4316]960    set_namelist namelist_cfg nn_fwb 0
[7646]961    set_namelist namelist_cfg jpni 4
962    set_namelist namelist_cfg jpnj 8
[4147]963    set_namelist namelist_cfg jpnij 32
[7646]964    set_namelist namelist_cfg ln_rstart .true.
[4147]965    set_namelist namelist_cfg nn_rstctl 2
[7646]966    set_namelist namelist_ice_cfg cn_icerst_in \"SAS_00000050_restart_ice\"
[4245]967    if [ ${USING_MPMD} == "yes" ] ; then
968       set_xio_using_server iodef.xml true
969    else
970       set_xio_using_server iodef.xml false
971    fi
[7646]972    for (( i=1; i<=$NPROC; i++)) ; do
973        L_NPROC=$(( $i - 1 ))
974        L_NPROC=`printf "%04d\n" ${L_NPROC}`
975        ln -sf ../LONG/SAS_00000050_restart_ice_${L_NPROC}.nc .
976    done
[4147]977    cd ${SETTE_DIR}
[4245]978    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4147]979    cd ${SETTE_DIR}
980    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
981fi
982
[7646]983# TESTS FOR ISOMIP CONFIGURATION
[4796]984if [ ${config} -eq 12 ] ;  then
[4990]985    ## Restartability tests for ISOMIP
986    export TEST_NAME="LONG"
[7684]987    cd ${CONFIG_DIR0}
988    . ./makenemo -m ${CMP_NAM} -n ISOMIP_LONG -r ISOMIP -a TEST_CASES -j 8 del_key ${DEL_KEYS}
[4990]989    cd ${SETTE_DIR}
990    . ./param.cfg
991    . ./all_functions.sh
992    . ./prepare_exe_dir.sh
993    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]994    NPROC=32
[4990]995    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
996    cd ${EXE_DIR}
997    set_namelist namelist_cfg cn_exp \"ISOMIP_LONG\"
998    set_namelist namelist_cfg nn_it000 1
999    set_namelist namelist_cfg nn_itend 96
1000    set_namelist namelist_cfg nn_stock 48
1001    set_namelist namelist_cfg ln_clobber .true.
[7684]1002    set_namelist namelist_cfg ln_read_cfg .false.
[7646]1003    set_namelist namelist_cfg jpni 4
1004    set_namelist namelist_cfg jpnj 8
1005    set_namelist namelist_cfg jpnij 32
[4990]1006    if [ ${USING_MPMD} == "yes" ] ; then
1007       set_xio_using_server iodef.xml true
1008    else
1009       set_xio_using_server iodef.xml false
1010    fi
1011    cd ${SETTE_DIR}
1012    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4147]1013
[4990]1014    cd ${SETTE_DIR}
1015    export TEST_NAME="SHORT"
1016    . ./prepare_exe_dir.sh
1017    cd ${EXE_DIR}
1018    set_namelist namelist_cfg cn_exp \"ISOMIP_SHORT\"
1019    set_namelist namelist_cfg nn_it000 49
1020    set_namelist namelist_cfg nn_itend 96
1021    set_namelist namelist_cfg nn_stock 48
1022    set_namelist namelist_cfg ln_rstart .true.
1023    set_namelist namelist_cfg nn_rstctl 2
1024    set_namelist namelist_cfg ln_clobber .true.
[7684]1025    set_namelist namelist_cfg ln_read_cfg .false.
[7646]1026    set_namelist namelist_cfg jpni 4
1027    set_namelist namelist_cfg jpnj 8
1028    set_namelist namelist_cfg jpnij 32
[4990]1029    set_namelist namelist_cfg cn_ocerst_in \"ISOMIP_LONG_00000048_restart\"
1030    if [ ${USING_MPMD} == "yes" ] ; then
1031       set_xio_using_server iodef.xml true
1032    else
1033       set_xio_using_server iodef.xml false
1034    fi
1035    for (( i=1; i<=$NPROC; i++)) ; do
1036        L_NPROC=$(( $i - 1 ))
1037        L_NPROC=`printf "%04d\n" ${L_NPROC}`
1038        ln -sf ../LONG/ISOMIP_LONG_00000048_restart_${L_NPROC}.nc .
1039    done
1040    if [ ${USING_MPMD} == "yes" ] ; then
1041       set_xio_using_server iodef.xml true
1042    else
1043       set_xio_using_server iodef.xml false
1044    fi
1045    cd ${SETTE_DIR}
1046    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
1047    cd ${SETTE_DIR}
1048    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1049fi
[7646]1050if [ ${config} -eq 13 ] ;  then
[4990]1051    ## Reproducibility tests for ISOMIP
[7646]1052    export TEST_NAME="REPRO_4_8"
[7684]1053    cd ${CONFIG_DIR0}
1054    . ./makenemo -m ${CMP_NAM} -n ISOMIP_32 -r ISOMIP -a TEST_CASES -j 8 del_key ${DEL_KEYS}
[4990]1055    cd ${SETTE_DIR}
1056    . ./param.cfg
1057    . ./all_functions.sh
1058    . ./prepare_exe_dir.sh
1059    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]1060    NPROC=32
[4990]1061    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1062    cd ${EXE_DIR}
1063    set_namelist namelist_cfg cn_exp \"ISOMIP_14\"
1064    set_namelist namelist_cfg nn_it000 1
1065    set_namelist namelist_cfg nn_itend 48
1066    set_namelist namelist_cfg ln_ctl .false.
1067    set_namelist namelist_cfg ln_clobber .true.
[7684]1068    set_namelist namelist_cfg ln_read_cfg .false.
[7646]1069    set_namelist namelist_cfg jpni 4
1070    set_namelist namelist_cfg jpnj 8
1071    set_namelist namelist_cfg jpnij 32
[4990]1072    if [ ${USING_MPMD} == "yes" ] ; then
1073       set_xio_using_server iodef.xml true
1074    else
1075       set_xio_using_server iodef.xml false
1076    fi
1077    cd ${SETTE_DIR}
1078    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
1079    cd ${SETTE_DIR}
1080    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1081
1082    cd ${SETTE_DIR}
[7646]1083    export TEST_NAME="REPRO_8_4"
[4990]1084    . ./prepare_exe_dir.sh
1085    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]1086    NPROC=32
[4990]1087    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1088    cd ${EXE_DIR}
1089    set_namelist namelist_cfg cn_exp \"ISOMIP_22\"
1090    set_namelist namelist_cfg nn_it000 1
1091    set_namelist namelist_cfg nn_itend 48
1092    set_namelist namelist_cfg ln_ctl .false.
1093    set_namelist namelist_cfg ln_clobber .true.
[7684]1094    set_namelist namelist_cfg ln_read_cfg .false.
[7646]1095    set_namelist namelist_cfg jpni 8
1096    set_namelist namelist_cfg jpnj 4
1097    set_namelist namelist_cfg jpnij 32
[4990]1098    if [ ${USING_MPMD} == "yes" ] ; then
1099       set_xio_using_server iodef.xml true
1100    else
1101       set_xio_using_server iodef.xml false
1102    fi
1103    cd ${SETTE_DIR}
1104    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
1105    cd ${SETTE_DIR}
1106    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1107
1108fi
1109
1110## Test assimilation interface code, OBS and ASM for reproducibility
1111## Restartability not tested (ASM code not restartable while increments are being applied)
[7646]1112if [ ${config} -eq 14 ] ; then
[4990]1113   ## Reproducibility tests for ORCA2_LIM_OBS
[7646]1114    export TEST_NAME="REPRO_4_8"
[7684]1115    cd ${CONFIG_DIR0}
[7646]1116    . ./makenemo -m ${CMP_NAM} -n ORCA2_LIM3_OBS -r ORCA2_LIM3 -j 8 add_key "key_asminc" del_key ${DEL_KEYS}
[4990]1117    cd ${SETTE_DIR}
1118    . ./param.cfg
1119    . ./all_functions.sh
1120    . ./prepare_exe_dir.sh
1121    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]1122    NPROC=32
[4990]1123    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1124    cd ${EXE_DIR}
1125    set_namelist namelist_cfg nn_it000 1
1126    set_namelist namelist_cfg nn_itend 75
1127    set_namelist namelist_cfg nn_fwb 0
1128    set_namelist namelist_cfg ln_ctl .false.
1129    set_namelist namelist_cfg ln_clobber .true.
[7646]1130    set_namelist namelist_cfg ln_read_cfg .true.
1131    set_namelist namelist_cfg ln_linssh .false.
[4990]1132    set_namelist namelist_cfg jpni 4
[7646]1133    set_namelist namelist_cfg jpnj 8
1134    set_namelist namelist_cfg jpnij 32
[6140]1135    set_namelist namelist_cfg ln_diaobs .true.
[4990]1136    set_namelist namelist_cfg ln_t3d .true.
1137    set_namelist namelist_cfg ln_s3d .true.
1138    set_namelist namelist_cfg ln_sst .true.
1139    set_namelist namelist_cfg ln_sla .true.
[6140]1140    set_namelist namelist_cfg ln_sic .true.
1141    set_namelist namelist_cfg ln_vel3d .true.
[4990]1142    set_namelist namelist_cfg ln_bkgwri .true.
1143    set_namelist namelist_cfg ln_trainc .true.
1144    set_namelist namelist_cfg ln_dyninc .true.
1145    set_namelist namelist_cfg ln_sshinc .true.
1146    set_namelist namelist_cfg ln_asmiau .true.
1147    if [ ${USING_MPMD} == "yes" ] ; then
1148       set_xio_using_server iodef.xml true
1149    else
1150       set_xio_using_server iodef.xml false
1151    fi
1152    cd ${SETTE_DIR}
[7646]1153    . ./prepare_job.sh input_ORCA2_LIM3_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4990]1154    cd ${SETTE_DIR}
1155    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1156
1157   cd ${SETTE_DIR}
[7646]1158    export TEST_NAME="REPRO_8_4"
[4990]1159    . ./prepare_exe_dir.sh
1160    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]1161    NPROC=32
[4990]1162    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1163    cd ${EXE_DIR}
1164    set_namelist namelist_cfg nn_it000 1
1165    set_namelist namelist_cfg nn_itend 75
1166    set_namelist namelist_cfg nn_fwb 0
1167    set_namelist namelist_cfg ln_ctl .false.
1168    set_namelist namelist_cfg ln_clobber .true.
[7646]1169    set_namelist namelist_cfg ln_read_cfg .true.
1170    set_namelist namelist_cfg ln_linssh .false.
1171    set_namelist namelist_cfg jpni 8
1172    set_namelist namelist_cfg jpnj 4
1173    set_namelist namelist_cfg jpnij 32
[6140]1174    set_namelist namelist_cfg ln_diaobs .true.
[4990]1175    set_namelist namelist_cfg ln_t3d .true.
1176    set_namelist namelist_cfg ln_s3d .true.
1177    set_namelist namelist_cfg ln_sst .true.
1178    set_namelist namelist_cfg ln_sla .true.
[6140]1179    set_namelist namelist_cfg ln_sic .true.
1180    set_namelist namelist_cfg ln_vel3d .true.
[4990]1181    set_namelist namelist_cfg ln_bkgwri .true.
1182    set_namelist namelist_cfg ln_trainc .true.
1183    set_namelist namelist_cfg ln_dyninc .true.
1184    set_namelist namelist_cfg ln_sshinc .true.
1185    set_namelist namelist_cfg ln_asmiau .true.
1186    if [ ${USING_MPMD} == "yes" ] ; then
1187       set_xio_using_server iodef.xml true
1188    else
1189       set_xio_using_server iodef.xml false
1190    fi
1191    cd ${SETTE_DIR}
[7646]1192    . ./prepare_job.sh input_ORCA2_LIM3_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4990]1193    cd ${SETTE_DIR}
1194    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1195fi
[4245]1196# TEST FOR ORCA2_LIM_AGRIF : simple test of running AGRIF (no restartability neither reproducibility tests)
[7646]1197if [ ${config} -eq 15 ] ;  then
[4245]1198    ## ORCA2_LIM with Agulhas AGRIF zoom in MPI
1199    export TEST_NAME="SHORT"
[7684]1200    cd ${CONFIG_DIR0}
[7646]1201    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_1_2 -r ORCA2_LIM -j 8 add_key "key_agrif" del_key "key_zdftmx" del_key ${DEL_KEYS}
[4245]1202    cd ${SETTE_DIR}
[4252]1203    . ./param.cfg
1204    . ./all_functions.sh
1205    . ./prepare_exe_dir.sh
[4245]1206    JOB_FILE=${EXE_DIR}/run_job.sh
1207    NPROC=2
1208    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1209    cd ${EXE_DIR}
1210    set_namelist namelist_cfg nn_it000 1
1211    set_namelist namelist_cfg nn_itend 75
1212    set_namelist namelist_cfg ln_ctl .false.
1213    set_namelist namelist_cfg ln_clobber .true.
[7646]1214    set_namelist namelist_cfg ln_read_cfg .true.
1215    set_namelist namelist_cfg ln_linssh .true.
1216    set_namelist namelist_cfg ln_hpg_sco .false.
1217    set_namelist namelist_cfg ln_hpg_zps .true.
[4316]1218    set_namelist namelist_cfg nn_fwb 0
[4245]1219    set_namelist namelist_cfg jpni 1
1220    set_namelist namelist_cfg jpnj 2
1221    set_namelist namelist_cfg jpnij 2
1222    set_namelist 1_namelist_cfg nn_it000 1
1223    set_namelist 1_namelist_cfg nn_itend 150
1224    set_namelist 1_namelist_cfg ln_ctl .false.
1225    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1226    set_namelist 1_namelist_cfg ln_read_cfg .true.
1227    set_namelist 1_namelist_cfg ln_linssh .true.
1228    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1229    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[4245]1230    if [ ${USING_MPMD} == "yes" ] ; then
1231       set_xio_using_server iodef.xml true
1232    else
1233       set_xio_using_server iodef.xml false
1234    fi
1235    cd ${SETTE_DIR}
1236    . ./prepare_job.sh input_ORCA2_LIM_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
1237    cd ${SETTE_DIR}
1238    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1239fi
1240
[5589]1241# test code corruption with AGRIF
1242# Compile and run with or without AGRIF ORCA2_LIM
[7646]1243if [ ${config} -eq 16 ] ;  then
1244    # First run same as 15 but without zoom
[5589]1245    export TEST_NAME="SHORT_NOZOOM"
[7684]1246    cd ${CONFIG_DIR0}
[7646]1247    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_2_2 -r ORCA2_LIM -j 8 add_key "key_agrif" del_key "key_zdftmx" del_key ${DEL_KEYS}
[5589]1248    cd ${SETTE_DIR}
1249    . ./param.cfg
1250    . ./all_functions.sh
1251    . ./prepare_exe_dir.sh
1252    JOB_FILE=${EXE_DIR}/run_job.sh
1253    NPROC=4
1254    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1255    cd ${EXE_DIR}
1256    set_namelist namelist_cfg nn_it000 1
1257    set_namelist namelist_cfg nn_itend 75
1258    set_namelist namelist_cfg ln_ctl .false.
1259    set_namelist namelist_cfg ln_clobber .true.
[7646]1260    set_namelist namelist_cfg ln_read_cfg .true.
1261    set_namelist namelist_cfg ln_linssh .true.
1262    set_namelist namelist_cfg ln_hpg_sco .false.
1263    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1264    set_namelist namelist_cfg nn_fwb 0
1265    set_namelist namelist_cfg jpni 2
1266    set_namelist namelist_cfg jpnj 2
1267    set_namelist namelist_cfg jpnij 4
1268#
1269#   Set the number of fine grids to zero:   
1270    sed -i "1s/.*/0/" ${EXE_DIR}/AGRIF_FixedGrids.in
1271
1272    if [ ${USING_MPMD} == "yes" ] ; then
1273       set_xio_using_server iodef.xml true
1274    else
1275       set_xio_using_server iodef.xml false
1276    fi
1277    cd ${SETTE_DIR}
1278    . ./prepare_job.sh input_ORCA2_LIM_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
1279    cd ${SETTE_DIR}
1280    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1281
1282    export TEST_NAME="SHORT_NOAGRIF"
[7684]1283    cd ${CONFIG_DIR0}
[7646]1284    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_2_2_NAG -r ORCA2_LIM -j 8 del_key "key_zdftmx" del_key ${DEL_KEYS}
[5589]1285    cd ${SETTE_DIR}
1286    . ./param.cfg
1287    . ./all_functions.sh
1288    . ./prepare_exe_dir.sh
1289    JOB_FILE=${EXE_DIR}/run_job.sh
1290    NPROC=4
1291    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1292    cd ${EXE_DIR}
1293    set_namelist namelist_cfg nn_it000 1
1294    set_namelist namelist_cfg nn_itend 75
1295    set_namelist namelist_cfg ln_ctl .false.
1296    set_namelist namelist_cfg ln_clobber .true.
[7646]1297    set_namelist namelist_cfg ln_read_cfg .true.
1298    set_namelist namelist_cfg ln_linssh .true.
1299    set_namelist namelist_cfg ln_hpg_sco .false.
1300    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1301    set_namelist namelist_cfg nn_fwb 0
1302    set_namelist namelist_cfg jpni 2
1303    set_namelist namelist_cfg jpnj 2
1304    set_namelist namelist_cfg jpnij 4
1305#
1306    if [ ${USING_MPMD} == "yes" ] ; then
1307       set_xio_using_server iodef.xml true
1308    else
1309       set_xio_using_server iodef.xml false
1310    fi
1311    cd ${SETTE_DIR}
1312    . ./prepare_job.sh input_ORCA2_LIM_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
1313    cd ${SETTE_DIR}
1314    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1315
1316fi
1317
1318## Restartability tests for ORCA2_LIM_AGRIF
[7646]1319if [ ${config} -eq 17 ] ;  then
[5589]1320    export TEST_NAME="LONG"
[7684]1321    cd ${CONFIG_DIR0}
[7646]1322    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_LONG -r ORCA2_LIM -j 8 add_key "key_agrif" del_key "key_zdftmx" del_key ${DEL_KEYS}
[5589]1323    cd ${SETTE_DIR}
1324    . ./param.cfg
1325    . ./all_functions.sh
1326    . ./prepare_exe_dir.sh
1327    JOB_FILE=${EXE_DIR}/run_job.sh
1328    NPROC=4
1329    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1330    cd ${EXE_DIR}
1331    set_namelist namelist_cfg cn_exp \"O2LP_LONG\"
1332    set_namelist namelist_cfg nn_it000 1
1333    set_namelist namelist_cfg nn_itend 150
1334    set_namelist namelist_cfg nn_stock 75
1335    set_namelist namelist_cfg ln_clobber .true.
[7646]1336    set_namelist namelist_cfg ln_read_cfg .true.
1337    set_namelist namelist_cfg ln_linssh .true.
1338    set_namelist namelist_cfg ln_hpg_sco .false.
1339    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1340    set_namelist namelist_cfg nn_fwb 0
1341    set_namelist namelist_cfg jpni 2
1342    set_namelist namelist_cfg jpnj 2
1343    set_namelist namelist_cfg jpnij 4
1344    set_namelist 1_namelist_cfg cn_exp \"O2LP_LONG\"
1345    set_namelist 1_namelist_cfg nn_it000 1
1346    set_namelist 1_namelist_cfg nn_itend 300
1347    set_namelist 1_namelist_cfg nn_stock 150
1348    set_namelist 1_namelist_cfg ln_ctl .false.
1349    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1350    set_namelist 1_namelist_cfg ln_read_cfg .true.
1351    set_namelist 1_namelist_cfg ln_linssh .true.
1352    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1353    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1354#
1355    if [ ${USING_MPMD} == "yes" ] ; then
1356       set_xio_using_server iodef.xml true
1357    else
1358       set_xio_using_server iodef.xml false
1359    fi
1360    cd ${SETTE_DIR}
1361    . ./prepare_job.sh input_ORCA2_LIM_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
1362   
1363    cd ${SETTE_DIR}
1364    export TEST_NAME="SHORT"
1365    . ./prepare_exe_dir.sh
1366    cd ${EXE_DIR}
1367    set_namelist namelist_cfg cn_exp \"O2LP_SHORT\"
1368    set_namelist namelist_cfg nn_it000 76
1369    set_namelist namelist_cfg nn_itend 150
1370    set_namelist namelist_cfg nn_stock 75
1371    set_namelist namelist_cfg ln_rstart .true.
1372    set_namelist namelist_cfg nn_rstctl 2
1373    set_namelist namelist_cfg ln_clobber .true.
[7646]1374    set_namelist namelist_cfg ln_read_cfg .true.
1375    set_namelist namelist_cfg ln_linssh .true.
1376    set_namelist namelist_cfg ln_hpg_sco .false.
1377    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1378    set_namelist namelist_cfg nn_fwb 0
1379    set_namelist namelist_cfg jpni 2
1380    set_namelist namelist_cfg jpnj 2
1381
1382    set_namelist namelist_cfg jpnij 4
[6140]1383#   set_namelist namelist_cfg nn_solv 2
[5589]1384    set_namelist 1_namelist_cfg cn_exp \"O2LP_SHORT\"
1385    set_namelist 1_namelist_cfg nn_it000 151
1386    set_namelist 1_namelist_cfg nn_itend 300
1387    set_namelist 1_namelist_cfg nn_stock 150
1388    set_namelist 1_namelist_cfg ln_rstart .true.
1389    set_namelist 1_namelist_cfg nn_rstctl 2
1390    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1391    set_namelist 1_namelist_cfg ln_read_cfg .true.
1392    set_namelist 1_namelist_cfg ln_linssh .true.
1393    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1394    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1395    set_namelist namelist_cfg cn_ocerst_in \"O2LP_LONG_00000075_restart\"
1396    set_namelist namelist_ice_cfg cn_icerst_in \"O2LP_LONG_00000075_restart_ice\"
1397
1398    set_namelist 1_namelist_cfg cn_ocerst_in \"O2LP_LONG_00000150_restart\"
1399
1400    for (( i=1; i<=$NPROC; i++)) ; do
1401        L_NPROC=$(( $i - 1 ))
1402        L_NPROC=`printf "%04d\n" ${L_NPROC}`
1403        ln -sf ../LONG/O2LP_LONG_00000075_restart_${L_NPROC}.nc .
1404        ln -sf ../LONG/O2LP_LONG_00000075_restart_ice_${L_NPROC}.nc .
1405        ln -sf ../LONG/1_O2LP_LONG_00000150_restart_${L_NPROC}.nc .
1406    done
1407    if [ ${USING_MPMD} == "yes" ] ; then
1408       set_xio_using_server iodef.xml true
1409    else
1410       set_xio_using_server iodef.xml false
1411    fi
1412    cd ${SETTE_DIR}
1413    . ./prepare_job.sh input_ORCA2_LIM_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
1414    cd ${SETTE_DIR}
1415    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1416fi
1417
1418## Reproducibility tests for ORCA2_LIM_AGRIF
[7646]1419if [ ${config} -eq 18 ] ;  then
[5589]1420    export TEST_NAME="REPRO_4_4"
[7684]1421    cd ${CONFIG_DIR0}
[7646]1422    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_16 -r ORCA2_LIM -j 8 add_key "key_agrif" del_key "key_zdftmx" del_key ${DEL_KEYS}
[5589]1423    cd ${SETTE_DIR}
1424    . ./param.cfg
1425    . ./all_functions.sh
1426    . ./prepare_exe_dir.sh
1427    JOB_FILE=${EXE_DIR}/run_job.sh
1428    NPROC=16
1429    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1430    cd ${EXE_DIR}
1431    set_namelist namelist_cfg nn_it000 1
1432    set_namelist namelist_cfg nn_itend 75
1433    set_namelist namelist_cfg ln_ctl .false.
1434    set_namelist namelist_cfg ln_clobber .true.
[7646]1435    set_namelist namelist_cfg ln_read_cfg .true.
1436    set_namelist namelist_cfg ln_linssh .true.
1437    set_namelist namelist_cfg ln_hpg_sco .false.
1438    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1439    set_namelist namelist_cfg nn_fwb 0
1440    set_namelist namelist_cfg jpni 4
1441    set_namelist namelist_cfg jpnj 4
1442    set_namelist namelist_cfg jpnij 16
1443    set_namelist 1_namelist_cfg nn_it000 1
1444    set_namelist 1_namelist_cfg nn_itend 150
1445    set_namelist 1_namelist_cfg ln_ctl .false.
1446    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1447    set_namelist 1_namelist_cfg ln_read_cfg .true.
1448    set_namelist 1_namelist_cfg ln_linssh .true.
1449    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1450    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1451
1452    if [ ${USING_MPMD} == "yes" ] ; then
1453       set_xio_using_server iodef.xml true
1454    else
1455       set_xio_using_server iodef.xml false
1456    fi
1457    cd ${SETTE_DIR}
1458    . ./prepare_job.sh input_ORCA2_LIM_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
1459    cd ${SETTE_DIR}
1460    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1461
1462    cd ${SETTE_DIR}
1463    export TEST_NAME="REPRO_2_8"
1464    . ./prepare_exe_dir.sh
1465    JOB_FILE=${EXE_DIR}/run_job.sh
1466    NPROC=16
1467    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1468    cd ${EXE_DIR}
1469    set_namelist namelist_cfg nn_it000 1
1470    set_namelist namelist_cfg nn_itend 75
1471    set_namelist namelist_cfg ln_ctl .false.
1472    set_namelist namelist_cfg ln_clobber .true.
[7646]1473    set_namelist namelist_cfg ln_read_cfg .true.
1474    set_namelist namelist_cfg ln_linssh .true.
1475    set_namelist namelist_cfg ln_hpg_sco .false.
1476    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1477    set_namelist namelist_cfg nn_fwb 0
1478    set_namelist namelist_cfg jpni 2
1479    set_namelist namelist_cfg jpnj 8
1480    set_namelist namelist_cfg jpnij 16
1481    set_namelist 1_namelist_cfg nn_it000 1
1482    set_namelist 1_namelist_cfg nn_itend 150
1483    set_namelist 1_namelist_cfg ln_ctl .false.
1484    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1485    set_namelist 1_namelist_cfg ln_read_cfg .true.
1486    set_namelist 1_namelist_cfg ln_linssh .true.
1487    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1488    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1489
1490    if [ ${USING_MPMD} == "yes" ] ; then
1491       set_xio_using_server iodef.xml true
1492    else
1493       set_xio_using_server iodef.xml false
1494    fi
1495    cd ${SETTE_DIR}
1496    . ./prepare_job.sh input_ORCA2_LIM_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
1497    cd ${SETTE_DIR}
1498    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1499fi
1500
[3520]1501done
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