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trcnam.F90 in branches/NERC/dev_r5107_NOC_MEDUSA/NEMOGCM/NEMO/TOP_SRC – NEMO

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source: branches/NERC/dev_r5107_NOC_MEDUSA/NEMOGCM/NEMO/TOP_SRC/trcnam.F90 @ 5712

Last change on this file since 5712 was 5707, checked in by acc, 9 years ago
JPALM --25-08-2015 -- add MEDUSA in the branch. MEDUSA version already up-to-date with this trunk revision
Property svn:keywords set to `Id`
File size: 20.3 KB

Line
1	MODULE trcnam
2	!!======================================================================
3	!! * MODULE trcnam *
4	!! TOP : Read and print options for the passive tracer run (namelist)
5	!!======================================================================
6	!! History : - ! 1996-11 (M.A. Foujols, M. Levy) original code
7	!! - ! 1998-04 (M.A Foujols, L. Bopp) ahtrb0 for isopycnal mixing
8	!! - ! 1999-10 (M.A. Foujols, M. Levy) separation of sms
9	!! - ! 2000-07 (A. Estublier) add TVD and MUSCL : Tests on ndttrc
10	!! - ! 2000-11 (M.A Foujols, E Kestenare) trcrat, ahtrc0 and aeivtr0
11	!! - ! 2001-01 (E Kestenare) suppress ndttrc=1 for CEN2 and TVD schemes
12	!! 1.0 ! 2005-03 (O. Aumont, A. El Moussaoui) F90
13	!!----------------------------------------------------------------------
14	#if defined key_top
15	!!----------------------------------------------------------------------
16	!! 'key_top' TOP models
17	!!----------------------------------------------------------------------
18	!! trc_nam : Read and print options for the passive tracer run (namelist)
19	!!----------------------------------------------------------------------
20	USE oce_trc ! shared variables between ocean and passive tracers
21	USE trc ! passive tracers common variables
22	USE trcnam_trp ! Transport namelist
23	USE trcnam_pisces ! PISCES namelist
24	USE trcnam_cfc ! CFC SMS namelist
25	USE trcnam_c14b ! C14 SMS namelist
26	USE trcnam_my_trc ! MY_TRC SMS namelist
27	USE trcnam_medusa ! MEDUSA namelist
28	USE trcnam_idtra ! Idealise tracer namelist
29	USE trd_oce
30	USE trdtrc_oce
31	USE iom ! I/O manager
32
33	IMPLICIT NONE
34	PRIVATE
35
36	PUBLIC trc_nam_run ! called in trcini
37	PUBLIC trc_nam ! called in trcini
38
39	!! * Substitutions
40	# include "top_substitute.h90"
41	!!----------------------------------------------------------------------
42	!! NEMO/TOP 3.3 , NEMO Consortium (2010)
43	!! $Id$
44	!! Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt)
45	!!----------------------------------------------------------------------
46
47	CONTAINS
48
49
50	SUBROUTINE trc_nam
51	!!---------------------------------------------------------------------
52	!! * ROUTINE trc_nam *
53	!!
54	!! ** Purpose : READ and PRINT options for the passive tracer run (namelist)
55	!!
56	!! ** Method : - read passive tracer namelist
57	!! - read namelist of each defined SMS model
58	!! ( (PISCES, CFC, MY_TRC )
59	!!---------------------------------------------------------------------
60	INTEGER :: jn, jk ! dummy loop indice
61	! ! Parameters of the run
62	IF( .NOT. lk_offline ) CALL trc_nam_run
63
64	! ! passive tracer informations
65	# if defined key_debug_medusa
66	CALL flush(numout)
67	IF (lwp) write (numout,*) '------------------------------'
68	IF (lwp) write (numout,*) 'Jpalm - debug'
69	IF (lwp) write (numout,*) 'in trc_nam - just before CALL trc_nam_trc'
70	IF (lwp) write (numout,*) ' '
71	# endif
72	!
73	CALL trc_nam_trc
74
75	! ! Parameters of additional diagnostics
76	# if defined key_debug_medusa
77	CALL flush(numout)
78	IF (lwp) write (numout,*) '------------------------------'
79	IF (lwp) write (numout,*) 'Jpalm - debug'
80	IF (lwp) write (numout,*) 'CALL trc_nam_trc -- OK'
81	IF (lwp) write (numout,*) 'in trc_nam - just before CALL trc_nam_dia'
82	IF (lwp) write (numout,*) ' '
83	# endif
84	!
85
86	CALL trc_nam_dia
87
88	! ! namelist of transport
89	# if defined key_debug_medusa
90	CALL flush(numout)
91	IF (lwp) write (numout,*) '------------------------------'
92	IF (lwp) write (numout,*) 'Jpalm - debug'
93	IF (lwp) write (numout,*) 'CALL trc_nam_dia -- OK'
94	IF (lwp) write (numout,*) 'in trc_nam - just before CALL trc_nam_trp'
95	IF (lwp) write (numout,*) ' '
96	# endif
97	!
98	CALL trc_nam_trp
99	!
100	# if defined key_debug_medusa
101	CALL flush(numout)
102	IF (lwp) write (numout,*) '------------------------------'
103	IF (lwp) write (numout,*) 'Jpalm - debug'
104	IF (lwp) write (numout,*) 'CALL trc_nam_trp -- OK'
105	IF (lwp) write (numout,*) 'continue trc_nam '
106	IF (lwp) write (numout,*) ' '
107	CALL flush(numout)
108	# endif
109	!
110
111
112	IF( ln_rsttr ) ln_trcdta = .FALSE. ! restart : no need of clim data
113	!
114	IF( ln_trcdmp .OR. ln_trcdmp_clo ) ln_trcdta = .TRUE. ! damping : need to have clim data
115	!
116	IF( .NOT.ln_trcdta ) THEN
117	ln_trc_ini(:) = .FALSE.
118	ENDIF
119
120	IF(lwp) THEN ! control print
121	WRITE(numout,*)
122	WRITE(numout,*) ' Namelist : namtrc'
123	WRITE(numout,*) ' Read inputs data from file (y/n) ln_trcdta = ', ln_trcdta
124	WRITE(numout,*) ' Damping of passive tracer (y/n) ln_trcdmp = ', ln_trcdmp
125	WRITE(numout,*) ' Restoring of tracer on closed seas ln_trcdmp_clo = ', ln_trcdmp_clo
126	WRITE(numout,*) ' '
127	DO jn = 1, jptra
128	WRITE(numout,*) ' tracer nb : ', jn, ' short name : ', ctrcnm(jn)
129	END DO
130	WRITE(numout,*) ' '
131	# if defined key_debug_medusa
132	CALL flush(numout)
133	# endif
134	ENDIF
135
136	IF(lwp) THEN ! control print
137	IF( ln_rsttr ) THEN
138	WRITE(numout,*)
139	WRITE(numout,*) ' Read a restart file for passive tracer : ', TRIM( cn_trcrst_in )
140	WRITE(numout,*)
141	ENDIF
142	IF( ln_trcdta .AND. .NOT.ln_rsttr ) THEN
143	WRITE(numout,*)
144	WRITE(numout,*) ' Some of the passive tracers are initialised from climatologies '
145	WRITE(numout,*)
146	ENDIF
147	IF( .NOT.ln_trcdta ) THEN
148	WRITE(numout,*)
149	WRITE(numout,*) ' All the passive tracers are initialised with constant values '
150	WRITE(numout,*)
151	ENDIF
152	# if defined key_debug_medusa
153	CALL flush(numout)
154	# endif
155	ENDIF
156
157	# if defined key_debug_medusa
158	DO jk = 1, jpk
159	WRITE(numout,*) ' level number: ', jk, 'rdttrc: ',rdttrc(jk),'rdttra: ', rdttra(jk),'nn_dttrc: ', nn_dttrc
160	END DO
161	CALL flush(numout)
162	# endif
163
164	rdttrc(:) = rdttra(:) * FLOAT( nn_dttrc ) ! vertical profile of passive tracer time-step
165
166	IF(lwp) THEN ! control print
167	WRITE(numout,*)
168	WRITE(numout,*) ' Passive Tracer time step rdttrc = ', rdttrc(1)
169	WRITE(numout,*)
170	# if defined key_debug_medusa
171	CALL flush(numout)
172	# endif
173	ENDIF
174
175
176	#if defined key_trdmxl_trc \|\| defined key_trdtrc
177
178	REWIND( numnat_ref ) ! Namelist namtrc_trd in reference namelist : Passive tracer trends
179	READ ( numnat_ref, namtrc_trd, IOSTAT = ios, ERR = 905)
180	905 IF( ios /= 0 ) CALL ctl_nam ( ios , 'namtrc_trd in reference namelist', lwp )
181
182	REWIND( numnat_cfg ) ! Namelist namtrc_trd in configuration namelist : Passive tracer trends
183	READ ( numnat_cfg, namtrc_trd, IOSTAT = ios, ERR = 906 )
184	906 IF( ios /= 0 ) CALL ctl_nam ( ios , 'namtrc_trd in configuration namelist', lwp )
185	IF(lwm) WRITE ( numont, namtrc_trd )
186
187	IF(lwp) THEN
188	WRITE(numout,*)
189	WRITE(numout,*) ' trd_mxl_trc_init : read namelist namtrc_trd '
190	WRITE(numout,*) ' ~~~~~~~~~~~~~~~~ '
191	WRITE(numout,) ' frequency of trends diagnostics nn_trd_trc = ', nn_trd_trc
192	WRITE(numout,) ' control surface type nn_ctls_trc = ', nn_ctls_trc
193	WRITE(numout,) ' restart for ML diagnostics ln_trdmxl_trc_restart = ', ln_trdmxl_trc_restart
194	WRITE(numout,) ' flag to diagnose trends of '
195	WRITE(numout,*) ' instantantaneous or mean ML T/S ln_trdmxl_trc_instant = ', ln_trdmxl_trc_instant
196	WRITE(numout,) ' unit conversion factor rn_ucf_trc = ', rn_ucf_trc
197	DO jn = 1, jptra
198	IF( ln_trdtrc(jn) ) WRITE(numout,*) ' compute ML trends for tracer number :', jn
199	END DO
200	WRITE(numout,*) ' '
201	CALL flush(numout)
202	ENDIF
203	#endif
204
205	# if defined key_debug_medusa
206	CALL flush(numout)
207	IF (lwp) write (numout,*) '------------------------------'
208	IF (lwp) write (numout,*) 'Jpalm - debug'
209	IF (lwp) write (numout,*) 'Will now read SMS namelists : '
210	IF (lwp) write (numout,*) ' '
211	# endif
212	!
213
214	! namelist of SMS
215	! ---------------
216	IF( lk_pisces ) THEN ; CALL trc_nam_pisces ! PISCES bio-model
217	ELSE ; IF(lwp) WRITE(numout,*) ' PISCES not used'
218	ENDIF
219	!
220	# if defined key_debug_medusa
221	CALL flush(numout)
222	IF (lwp) write (numout,*) '------------------------------'
223	IF (lwp) write (numout,*) 'Jpalm - debug'
224	IF (lwp) write (numout,*) 'CALL trc_nam_pisces -- OK'
225	IF (lwp) write (numout,*) 'in trc_nam - just before CALL trc_nam_medusa'
226	IF (lwp) write (numout,*) ' '
227	# endif
228	!
229	IF( lk_medusa ) THEN ; CALL trc_nam_medusa ! MEDUSA tracers
230	ELSE ; IF(lwp) WRITE(numout,*) ' MEDUSA not used'
231	ENDIF
232	!
233	# if defined key_debug_medusa
234	CALL flush(numout)
235	IF (lwp) write (numout,*) '------------------------------'
236	IF (lwp) write (numout,*) 'Jpalm - debug'
237	IF (lwp) write (numout,*) 'CALL trc_nam_medusa -- OK'
238	IF (lwp) write (numout,*) 'in trc_nam - just before CALL trc_nam_idtra'
239	IF (lwp) write (numout,*) ' '
240	# endif
241	!
242	IF( lk_idtra ) THEN ; CALL trc_nam_idtra ! Idealize tracers
243	ELSE ; IF(lwp) WRITE(numout,*) ' Idealize tracers not used'
244	ENDIF
245	!
246	# if defined key_debug_medusa
247	CALL flush(numout)
248	IF (lwp) write (numout,*) '------------------------------'
249	IF (lwp) write (numout,*) 'Jpalm - debug'
250	IF (lwp) write (numout,*) 'CALL trc_nam_idtra -- OK'
251	IF (lwp) write (numout,*) 'in trc_nam - just before CALL trc_nam_cfc'
252	IF (lwp) write (numout,*) ' '
253	# endif
254	!
255	IF( lk_cfc ) THEN ; CALL trc_nam_cfc ! CFC tracers
256	ELSE ; IF(lwp) WRITE(numout,*) ' CFC not used'
257	ENDIF
258	!
259	# if defined key_debug_medusa
260	CALL flush(numout)
261	IF (lwp) write (numout,*) '------------------------------'
262	IF (lwp) write (numout,*) 'Jpalm - debug'
263	IF (lwp) write (numout,*) 'CALL trc_nam_cfc -- OK'
264	IF (lwp) write (numout,*) 'in trc_nam - just before CALL trc_nam_c14b'
265	IF (lwp) write (numout,*) ' '
266	# endif
267	!
268	IF( lk_c14b ) THEN ; CALL trc_nam_c14b ! C14 bomb tracers
269	ELSE ; IF(lwp) WRITE(numout,*) ' C14 not used'
270	ENDIF
271
272	IF( lk_my_trc ) THEN ; CALL trc_nam_my_trc ! MY_TRC tracers
273	ELSE ; IF(lwp) WRITE(numout,*) ' MY_TRC not used'
274	ENDIF
275	!
276	IF(lwp) CALL flush(numout)
277	END SUBROUTINE trc_nam
278
279	SUBROUTINE trc_nam_run
280	!!---------------------------------------------------------------------
281	!! * ROUTINE trc_nam *
282	!!
283	!! ** Purpose : read options for the passive tracer run (namelist)
284	!!
285	!!---------------------------------------------------------------------
286	NAMELIST/namtrc_run/ nn_dttrc, nn_writetrc, ln_rsttr, nn_rsttr, ln_top_euler, &
287	& cn_trcrst_in, cn_trcrst_out
288
289	INTEGER :: ios ! Local integer output status for namelist read
290
291	!!---------------------------------------------------------------------
292
293
294	IF(lwp) WRITE(numout,*) 'trc_nam : read the passive tracer namelists'
295	IF(lwp) WRITE(numout,*) '~~~~~~~'
296
297	CALL ctl_opn( numnat_ref, 'namelist_top_ref' , 'OLD' , 'FORMATTED', 'SEQUENTIAL', -1, numout, .FALSE. )
298	CALL ctl_opn( numnat_cfg, 'namelist_top_cfg' , 'OLD' , 'FORMATTED', 'SEQUENTIAL', -1, numout, .FALSE. )
299	IF(lwm) CALL ctl_opn( numont, 'output.namelist.top', 'UNKNOWN', 'FORMATTED', 'SEQUENTIAL', -1, numout, .FALSE., 1 )
300
301	REWIND( numnat_ref ) ! Namelist namtrc in reference namelist : Passive tracer variables
302	READ ( numnat_ref, namtrc_run, IOSTAT = ios, ERR = 901)
303	901 IF( ios /= 0 ) CALL ctl_nam ( ios , 'namtrc in reference namelist', lwp )
304
305	REWIND( numnat_cfg ) ! Namelist namtrc in configuration namelist : Passive tracer variables
306	READ ( numnat_cfg, namtrc_run, IOSTAT = ios, ERR = 902 )
307	902 IF( ios /= 0 ) CALL ctl_nam ( ios , 'namtrc in configuration namelist', lwp )
308	IF(lwm) WRITE ( numont, namtrc_run )
309
310	! computes the first time step of tracer model
311	nittrc000 = nit000 + nn_dttrc - 1
312
313	IF(lwp) THEN ! control print
314	WRITE(numout,*)
315	WRITE(numout,*) ' Namelist : namtrc_run'
316	WRITE(numout,*) ' time step freq. for passive tracer nn_dttrc = ', nn_dttrc
317	WRITE(numout,*) ' restart for passive tracer ln_rsttr = ', ln_rsttr
318	WRITE(numout,*) ' control of time step for passive tracer nn_rsttr = ', nn_rsttr
319	WRITE(numout,*) ' first time step for pass. trac. nittrc000 = ', nittrc000
320	WRITE(numout,*) ' frequency of outputs for passive tracers nn_writetrc = ', nn_writetrc
321	WRITE(numout,*) ' Use euler integration for TRC (y/n) ln_top_euler = ', ln_top_euler
322	WRITE(numout,*) ' '
323	CALL flush(numout)
324	ENDIF
325	!
326	END SUBROUTINE trc_nam_run
327
328
329	SUBROUTINE trc_nam_trc
330	!!---------------------------------------------------------------------
331	!! * ROUTINE trc_nam *
332	!!
333	!! ** Purpose : read options for the passive tracer run (namelist)
334	!!
335	!!---------------------------------------------------------------------
336	TYPE(PTRACER), DIMENSION(jptra) :: sn_tracer ! type of tracer for saving if not key_iomput
337	!!
338	NAMELIST/namtrc/ sn_tracer, ln_trcdta,ln_trcdmp, ln_trcdmp_clo
339
340	INTEGER :: ios ! Local integer output status for namelist read
341	INTEGER :: jn ! dummy loop indice
342	!!---------------------------------------------------------------------
343	IF(lwp) WRITE(numout,*)
344	IF(lwp) WRITE(numout,*) 'trc_nam : read the passive tracer namelists'
345	IF(lwp) WRITE(numout,*) '~~~~~~~'
346
347
348	REWIND( numnat_ref ) ! Namelist namtrc in reference namelist : Passive tracer variables
349	READ ( numnat_ref, namtrc, IOSTAT = ios, ERR = 901)
350	901 IF( ios /= 0 ) CALL ctl_nam ( ios , 'namtrc in reference namelist', lwp )
351
352	REWIND( numnat_cfg ) ! Namelist namtrc in configuration namelist : Passive tracer variables
353	READ ( numnat_cfg, namtrc, IOSTAT = ios, ERR = 902 )
354	902 IF( ios /= 0 ) CALL ctl_nam ( ios , 'namtrc in configuration namelist', lwp )
355	IF(lwm) WRITE ( numont, namtrc )
356
357	DO jn = 1, jptra
358	ctrcnm (jn) = TRIM( sn_tracer(jn)%clsname )
359	ctrcln (jn) = TRIM( sn_tracer(jn)%cllname )
360	ctrcun (jn) = TRIM( sn_tracer(jn)%clunit )
361	ln_trc_ini(jn) = sn_tracer(jn)%llinit
362	ln_trc_wri(jn) = sn_tracer(jn)%llsave
363	END DO
364	IF(lwp) CALL flush(numout)
365
366	END SUBROUTINE trc_nam_trc
367
368
369	SUBROUTINE trc_nam_dia
370	!!---------------------------------------------------------------------
371	!! * ROUTINE trc_nam_dia *
372	!!
373	!! ** Purpose : read options for the passive tracer diagnostics
374	!!
375	!! ** Method : - read passive tracer namelist
376	!! - read namelist of each defined SMS model
377	!! ( (PISCES, CFC, MY_TRC )
378	!!---------------------------------------------------------------------
379	INTEGER :: ierr
380	#if defined key_trdmxl_trc \|\| defined key_trdtrc
381	NAMELIST/namtrc_trd/ nn_trd_trc, nn_ctls_trc, rn_ucf_trc, &
382	& ln_trdmxl_trc_restart, ln_trdmxl_trc_instant, &
383	& cn_trdrst_trc_in, cn_trdrst_trc_out, ln_trdtrc
384	#endif
385	NAMELIST/namtrc_dia/ ln_diatrc, ln_diabio, nn_writedia, nn_writebio
386
387	INTEGER :: ios ! Local integer output status for namelist read
388	!!---------------------------------------------------------------------
389
390	IF(lwp) WRITE(numout,*)
391	IF(lwp) WRITE(numout,*) 'trc_nam_dia : read the passive tracer diagnostics options'
392	IF(lwp) WRITE(numout,*) '~~~~~~~'
393
394	IF(lwp) WRITE(numout,*)
395	IF(lwp) WRITE(numout,*) 'trc_nam_dia : read the passive tracer diagnostics options'
396	IF(lwp) WRITE(numout,*) '~~~~~~~'
397
398	REWIND( numnat_ref ) ! Namelist namtrc_dia in reference namelist : Passive tracer diagnostics
399	READ ( numnat_ref, namtrc_dia, IOSTAT = ios, ERR = 903)
400	903 IF( ios /= 0 ) CALL ctl_nam ( ios , 'namtrc_dia in reference namelist', lwp )
401
402	REWIND( numnat_cfg ) ! Namelist namtrc_dia in configuration namelist : Passive tracer diagnostics
403	READ ( numnat_cfg, namtrc_dia, IOSTAT = ios, ERR = 904 )
404	904 IF( ios /= 0 ) CALL ctl_nam ( ios , 'namtrc_dia in configuration namelist', lwp )
405	IF(lwm) WRITE ( numont, namtrc_dia )
406
407	IF(lwp) THEN
408	WRITE(numout,*)
409	WRITE(numout,*)
410	WRITE(numout,*) ' Namelist : namtrc_dia'
411	WRITE(numout,*) ' save additionnal diagnostics arrays ln_diatrc = ', ln_diatrc
412	WRITE(numout,*) ' save additionnal biology diagnostics arrays ln_diabio = ', ln_diabio
413	WRITE(numout,*) ' frequency of outputs for additional arrays nn_writedia = ', nn_writedia
414	WRITE(numout,*) ' frequency of outputs for biological trends nn_writebio = ', nn_writebio
415	WRITE(numout,*) ' '
416	CALL flush(numout)
417	ENDIF
418	!!
419	!! JPALM -- 17-07-2015 --
420	!! MEDUSA is not yet up-to-date with the iom server.
421	!! we use it for the main tracer, but not fully with diagnostics.
422	!! will have to adapt it properly when visiting Christian Ethee
423	!! for now, we change
424	!! IF( ln_diatrc .AND. .NOT. lk_iomput ) THEN
425	!! to :
426	!!
427	IF( ( ln_diatrc .AND. .NOT. lk_iomput ) .OR. ( ln_diatrc .AND. lk_medusa ) ) THEN
428	ALLOCATE( trc2d(jpi,jpj,jpdia2d), trc3d(jpi,jpj,jpk,jpdia3d), &
429	& ctrc2d(jpdia2d), ctrc2l(jpdia2d), ctrc2u(jpdia2d) , &
430	& ctrc3d(jpdia3d), ctrc3l(jpdia3d), ctrc3u(jpdia3d) , STAT = ierr )
431	IF( ierr > 0 ) CALL ctl_stop( 'STOP', 'trcnam: unable to allocate add. diag. array' )
432	!
433	trc2d(:,:,: ) = 0._wp ; ctrc2d(:) = ' ' ; ctrc2l(:) = ' ' ; ctrc2u(:) = ' '
434	trc3d(:,:,:,:) = 0._wp ; ctrc3d(:) = ' ' ; ctrc3l(:) = ' ' ; ctrc3u(:) = ' '
435	!
436	ENDIF
437
438	IF( ( ln_diabio .AND. .NOT. lk_iomput ) .OR. l_trdtrc ) THEN
439	ALLOCATE( trbio (jpi,jpj,jpk,jpdiabio) , &
440	& ctrbio(jpdiabio), ctrbil(jpdiabio), ctrbiu(jpdiabio), STAT = ierr )
441	IF( ierr > 0 ) CALL ctl_stop( 'STOP', 'trcnam: unable to allocate bio. diag. array' )
442	!
443	trbio(:,:,:,:) = 0._wp ; ctrbio(:) = ' ' ; ctrbil(:) = ' ' ; ctrbiu(:) = ' '
444	!
445	ENDIF
446	!
447	END SUBROUTINE trc_nam_dia
448
449	#else
450	!!----------------------------------------------------------------------
451	!! Dummy module : No passive tracer
452	!!----------------------------------------------------------------------
453	CONTAINS
454	SUBROUTINE trc_nam ! Empty routine
455	END SUBROUTINE trc_nam
456	SUBROUTINE trc_nam_run ! Empty routine
457	END SUBROUTINE trc_nam_run
458	#endif
459
460	!!----------------------------------------------------------------------
461	!! NEMO/TOP 3.3 , NEMO Consortium (2010)
462	!! $Id$
463	!! Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt)
464	!!======================================================================
465	END MODULE trcnam

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