[2359] | 1 | ###################################################### |
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| 2 | # Author : Simona Flavoni for NEMO |
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| 3 | # Contact : sflod@locean-ipsl.upmc.fr |
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| 4 | # |
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[2546] | 5 | # ---------------------------------------------------------------------- |
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| 6 | # NEMO/SETTE , NEMO Consortium (2010) |
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| 7 | # Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) |
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| 8 | # ---------------------------------------------------------------------- |
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| 9 | # |
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[2359] | 10 | # Some scripts called by sette.sh |
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| 11 | # all_functions.sh : all functions used by sette.sh |
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| 12 | ###################################################### |
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| 13 | #set -x |
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[7646] | 14 | #set -o posix |
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[2359] | 15 | #set -u |
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| 16 | #set -e |
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| 17 | #+ |
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| 18 | # |
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| 19 | # ================ |
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| 20 | # all_functions.sh |
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| 21 | # ================ |
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| 22 | # |
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| 23 | # ---------------------------------------------- |
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| 24 | # Set of functions used by sette.sh (NEMO tests) |
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| 25 | # ---------------------------------------------- |
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| 26 | # |
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| 27 | # SYNOPSIS |
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| 28 | # ======== |
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| 29 | # |
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| 30 | # :: |
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| 31 | # |
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[2756] | 32 | # $ ./set_namelist INPUT_NAMELIST VARIABLE VALUE |
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[3294] | 33 | # $ post_test_tidyup |
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[2359] | 34 | # |
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| 35 | # |
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| 36 | # DESCRIPTION |
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| 37 | # =========== |
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| 38 | # |
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[2494] | 39 | # function superegrep |
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[2545] | 40 | # input variable value |
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[2500] | 41 | # |
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[2359] | 42 | # function set_namelist |
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[2545] | 43 | # input namelist_name variable value |
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| 44 | # output namelist |
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[2500] | 45 | # |
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[3294] | 46 | # function post_test_tidyup |
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| 47 | # creates nemo_validation tree, and save output & debug files |
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| 48 | # this function creates tree of validation in NEMO_VALIDATION_DIR as follows : |
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| 49 | # |
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| 50 | # NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/REVISION_NUMBER(or DATE)/TEST_NAME |
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| 51 | # |
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| 52 | # NEMO_VALIDATION_DIR : is choosen in param.cfg |
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| 53 | # |
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| 54 | # WCONFIG_NAME : set by makenemo at the moment of compilation |
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| 55 | # |
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| 56 | # WCOMPILER_NAME : set by makenemo at the moment of compilation |
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| 57 | # |
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| 58 | # REVISION_NUMBER(or DATE) : revision number by svn info, if problems with svn date is taken |
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| 59 | # |
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| 60 | # TEST_NAME : set in sette.sh for each configuration to be tested (directory TEST_NAME is created under ${NEW_CONF} directory ) |
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| 61 | # |
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[2500] | 62 | # EXAMPLES |
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| 63 | # ======== |
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| 64 | # |
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| 65 | # :: |
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| 66 | # |
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[2756] | 67 | # $ ./set_namelist namelist nn_itend 75 |
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[7715] | 68 | # $ ./set_namelist namelist_ice cn_icerst_in \"00101231_restart_ice\" |
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[3294] | 69 | # $ post_test_tidyup |
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[2500] | 70 | # |
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| 71 | # |
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| 72 | # TODO |
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| 73 | # ==== |
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| 74 | # |
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| 75 | # option debug |
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| 76 | # |
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| 77 | # |
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| 78 | # EVOLUTIONS |
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| 79 | # ========== |
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| 80 | # |
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| 81 | # $Id$ |
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| 82 | # |
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| 83 | # * creation |
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[2507] | 84 | #- |
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[2359] | 85 | # function to find namelists parameters |
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| 86 | supergrep () { |
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| 87 | grep "^ *$1 *=" $2 | sed -e "s% *\!.*%%" |
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| 88 | } |
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| 89 | |
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[2494] | 90 | usage=" Usage : set_namelist input_namelist variable_name value" |
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[2510] | 91 | usage=" if value is a string ths is neede syntax : ./set_namelist namelist_name var_name \"new_value\" " |
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[2494] | 92 | |
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[11161] | 93 | # define validation dir |
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| 94 | set_valid_dir () { |
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| 95 | LANG=en_US |
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| 96 | REVISION_NB=`LC_MESSAGES=${LANG} ${SVN_CMD} info ${SETTE_DIR}/.. | grep "Last Changed Rev" | awk '{print $NF}'` |
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| 97 | if [ ${#REVISION_NB} -eq 0 ] |
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| 98 | then |
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| 99 | echo "some problems with ${SVN_CMD} info command" |
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| 100 | echo "some problems with ${SVN_CMD} info command" >> ${SETTE_DIR}/output.sette |
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| 101 | REVISION_NB=`date +%Y%m%d` |
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| 102 | echo "put in ${REVISION_NB} date" |
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| 103 | echo "put in ${REVISION_NB} date" >> ${SETTE_DIR}/output.sette |
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| 104 | else |
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| 105 | echo "value of revision number of NEMOGCM: ${REVISION_NB}" |
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| 106 | fi |
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[13622] | 107 | # detect local modifications (one MEDUSA-specific exception) |
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| 108 | [ `${SVN_CMD} status -q ${SETTE_DIR}/../{cfg,tests,src,src/TOP/MEDUSA,cfgs/SHARED_MEDUSA,cfgs/ORCA2_MEDUSA} | grep -v '~ ../tests/BENCH/EXPREF/namelist_top_cfg' | wc -l` -ge 1 ] && REVISION_NB=${REVISION_NB}+ |
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[11161] | 109 | NEMO_VALID=${NEMO_VALIDATION_DIR}/W${NEW_CONF}/${CMP_NAM}/${REVISION_NB}/${TEST_NAME} |
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| 110 | } |
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| 111 | |
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| 112 | # clean valid dir (move old ocean_output/run.stat and tracer to avoid checking them in case something wrong happen. |
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| 113 | clean_valid_dir () { |
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| 114 | # set_valid_dir # already done in sette_ref/sette_test |
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| 115 | echo "validation directory is : $NEMO_VALID" |
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| 116 | if [ -d $NEMO_VALID ] ; then |
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| 117 | [ -f ${NEMO_VALID}/ocean.output ] && mv ${NEMO_VALID}/ocean.output ${NEMO_VALID}/ocean.output_old |
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| 118 | [ -f ${NEMO_VALID}/run.stat ] && mv ${NEMO_VALID}/run.stat ${NEMO_VALID}/run.stat_old |
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| 119 | [ -f ${NEMO_VALID}/tracer.stat ] && mv ${NEMO_VALID}/tracer.stat ${NEMO_VALID}/tracer.stat_old |
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| 120 | fi |
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| 121 | } |
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| 122 | |
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[2359] | 123 | # function to set namelists parameters |
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| 124 | set_namelist () { |
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[2511] | 125 | minargcount=3 |
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[2545] | 126 | if [ ${#} -lt ${minargcount} ] |
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| 127 | then |
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[4245] | 128 | echo "not enough arguments for set_namelist" |
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[2511] | 129 | echo "${usage}" |
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| 130 | exit 1 |
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[2545] | 131 | fi |
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[2511] | 132 | unset minargcount |
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[2637] | 133 | if [ ! -f ${SETTE_DIR}/output.sette ] ; then |
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[2545] | 134 | touch ${SETTE_DIR}/output.sette |
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| 135 | fi |
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[2562] | 136 | |
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[2545] | 137 | echo "executing script : set_namelist $@" >> ${SETTE_DIR}/output.sette |
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| 138 | echo "################" >> ${SETTE_DIR}/output.sette |
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| 139 | |
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[3294] | 140 | VAR_NAME=$( supergrep $2 ${EXE_DIR}/$1 ) |
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[2637] | 141 | if [ ${#VAR_NAME} -eq 0 ] |
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| 142 | then |
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[4147] | 143 | echo "doing \"set_namelist $@\". " >> ${SETTE_DIR}/output.sette |
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| 144 | echo "variable: \"$2\" not found in \"${EXE_DIR}/$1\" " >> ${SETTE_DIR}/output.sette |
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| 145 | NAMREF=$( basename $1 _cfg )_ref |
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| 146 | echo "doing more : search in ${EXE_DIR}/$NAMREF " >> ${SETTE_DIR}/output.sette |
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| 147 | VAR_NAME=$( supergrep $2 ${EXE_DIR}/$NAMREF ) |
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| 148 | if [ ${#VAR_NAME} -eq 0 ] |
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| 149 | then |
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| 150 | echo " variable $VAR_NAME not found in ${EXE_DIR}/$1 nor in ${EXE_DIR}/$NAMREF " |
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| 151 | echo " check your variable name " |
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| 152 | echo "exit" |
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| 153 | echo "error in executing script : set_namelist $@" >> ${SETTE_DIR}/output.sette |
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| 154 | echo "....." >> ${SETTE_DIR}/output.sette |
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| 155 | exit 1 |
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| 156 | fi |
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| 157 | LINEVAR=$( grep -s -n "$VAR_NAME" ${EXE_DIR}/$NAMREF | awk -F: '{ { print $1} }' ) |
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| 158 | echo " $VAR_NAME found in ${EXE_DIR}/$NAMREF at line $LINEVAR " >> ${SETTE_DIR}/output.sette |
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| 159 | # search for namelist group name |
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| 160 | NAMGRP=$( head -n$LINEVAR ${EXE_DIR}/$NAMREF | grep --line-buffered "^&nam" | tail -1 | awk -F" " '{ { print $1} }' ) |
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| 161 | echo " variable $VAR_NAME will be added in $NAMGRP namelist-group of namelist file ${EXE_DIR}/$1 " >> ${SETTE_DIR}/output.sette |
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| 162 | # Add $VARNAME in namelist file ${EXE_DIR}/$1 in namelist group $NAMGRP |
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| 163 | # on mac osx, replace sed --posix by gsed (available with mac port) |
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| 164 | sed --posix "/${NAMGRP} /a\ ${VAR_NAME} " ${EXE_DIR}/$1 > ${EXE_DIR}/$1.tmp || gsed --posix "/${NAMGRP} /a\ ${VAR_NAME} " ${EXE_DIR}/$1 > ${EXE_DIR}/$1.tmp |
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| 165 | # if file not empty replace ${EXE_DIR}/$1 |
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| 166 | if [ -s ${EXE_DIR}/$1.tmp ] ; then |
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| 167 | mv ${EXE_DIR}/$1.tmp ${EXE_DIR}/$1 |
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| 168 | else |
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| 169 | echo "file ${EXE_DIR}/$1.tmp is empty. sed command went wrong "; exit 200 |
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| 170 | fi |
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[2637] | 171 | fi |
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[4147] | 172 | |
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[11161] | 173 | ARGS_LST="${@:3}" |
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| 174 | sed -e "s;${VAR_NAME}.*;${VAR_NAME};" ${EXE_DIR}/$1 > ${EXE_DIR}/$1.tmp |
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[3294] | 175 | mv ${EXE_DIR}/$1.tmp ${EXE_DIR}/$1 |
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[11161] | 176 | sed -e "s;${VAR_NAME};$2=${ARGS_LST};" ${EXE_DIR}/$1 > ${EXE_DIR}/$1.tmp |
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[3294] | 177 | mv ${EXE_DIR}/$1.tmp ${EXE_DIR}/$1 |
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[2583] | 178 | |
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[2545] | 179 | echo "finished script : set_namelist $@" >> ${SETTE_DIR}/output.sette |
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| 180 | echo "++++++++++++++++" >> ${SETTE_DIR}/output.sette |
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| 181 | echo " " >> ${SETTE_DIR}/output.sette |
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[2359] | 182 | } |
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[3294] | 183 | |
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[4245] | 184 | |
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[3294] | 185 | # function to tidy up after each test and populate the NEMO_VALIDATION store |
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| 186 | post_test_tidyup () { |
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[11161] | 187 | # Save current exit status of caller script |
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| 188 | RUN_STATUS=$? |
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| 189 | echo "Exit status: ${RUN_STATUS}" |
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[3294] | 190 | # |
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| 191 | # requires the following variables defined and exported from the calling script: |
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| 192 | # SETTE_DIR |
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| 193 | # INPUT_DIR |
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| 194 | # EXE_DIR |
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| 195 | # CONFIG_DIR |
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| 196 | # NEMO_VALIDATION_DIR |
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| 197 | # NEW_CONF |
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| 198 | # CMP_NAM |
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| 199 | # TEST_NAME |
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| 200 | echo "SETTE directory is : ${SETTE_DIR}" |
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| 201 | echo "INPUT directory is : ${INPUT_DIR}" |
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| 202 | echo "EXECUTION directory is : ${EXE_DIR}" |
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| 203 | echo "CONFIG directory is : ${CONFIG_DIR}" |
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[11161] | 204 | echo "VALIDATION directory is : ${NEMO_VALID}" |
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[3294] | 205 | echo "NEW CONFIGURATION is : ${NEW_CONF}" |
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| 206 | echo "COMPILER is : ${CMP_NAM}" |
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| 207 | echo "TEST is : ${TEST_NAME}" |
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[8468] | 208 | echo "TOOLS directory is : ${TOOLS_DIR}" |
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[3294] | 209 | ################################################################ |
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| 210 | # SMALL DEBUG |
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[11161] | 211 | EXIT_STATUS=${RUN_STATUS} |
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[4147] | 212 | if [ ! -r ${EXE_DIR}/ocean.output ] |
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| 213 | then |
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| 214 | grep "E R R O R" ${EXE_DIR}/ocean.output && echo "Some ERRORS at execution time, see ${EXE_DIR}/ocean.output" |
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[11161] | 215 | EXIT_STATUS=2 |
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| 216 | # exit 2 Error now catch in the report |
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[4147] | 217 | fi |
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| 218 | |
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[3294] | 219 | if [ ! -r ${EXE_DIR}/time.step ] |
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| 220 | then |
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| 221 | echo "file time.step does not exist" >> ${SETTE_DIR}/output.sette |
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| 222 | echo "some problems during execution of model" >> ${SETTE_DIR}/output.sette |
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[11161] | 223 | EXIT_STATUS=1 |
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| 224 | # exit 1 Error now catch in the report |
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[3294] | 225 | else |
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| 226 | echo "file time.step exists" >> ${SETTE_DIR}/output.sette |
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[4147] | 227 | echo "execution of model time step loop started" >> ${SETTE_DIR}/output.sette |
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[3294] | 228 | fi |
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[4147] | 229 | |
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[3294] | 230 | ################################################################ |
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| 231 | |
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| 232 | ################################################################ |
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[11161] | 233 | # |
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[3294] | 234 | # Creation of NEMO_VALIDATION tree |
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[11161] | 235 | # set_valid_dir already done in sette_reference_config |
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| 236 | mkdir -p ${NEMO_VALIDATION_DIR} |
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| 237 | if [ -d ${NEMO_VALIDATION_DIR} ] ; then |
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| 238 | echo "created ${NEMO_VALIDATION_DIR} directory" >> ${SETTE_DIR}/output.sette |
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[3294] | 239 | else |
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[11161] | 240 | echo "problems in creating ${NEMO_VALIDATION_DIR} directory" >> ${SETTE_DIR}/output.sette |
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[3294] | 241 | echo "EXIT," |
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| 242 | exit 1 |
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| 243 | fi |
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[11161] | 244 | # |
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| 245 | # Exit before populating validation directory if the model run has |
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| 246 | # returned a non-zero exit status |
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| 247 | # On CRAY NEMO exit is not the expected 999 or 123456 (let this bloc in case useful later on). |
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| 248 | # case ${EXIT_STATUS} in |
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| 249 | # 0|123456|999) echo " NEMO finished with exit code $EXIT_STATUS " ; post_test_tidyup ;; |
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| 250 | # *) echo " NEMO abort on an unexpected error (segmentation fault or whatever) $EXIT_STATUS " |
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| 251 | # esac |
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| 252 | |
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| 253 | [ ${EXIT_STATUS} -ne 0 ] && exit ${EXIT_STATUS} |
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| 254 | # |
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| 255 | # Save output & debug files in NEMO_VALIDATION tree |
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[9019] | 256 | echo "saving ocean & ice output, run.stat, tracer.stat files ...." >> ${SETTE_DIR}/output.sette |
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[3294] | 257 | echo " " >> ${SETTE_DIR}/output.sette |
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[11161] | 258 | [ -f ${EXE_DIR}/ocean.output ] && cp ${EXE_DIR}/*ocean.output ${NEMO_VALIDATION_DIR}/. |
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| 259 | [ -f ${EXE_DIR}/run.stat ] && cp ${EXE_DIR}/*run.stat ${NEMO_VALIDATION_DIR}/. |
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| 260 | [ -f ${EXE_DIR}/output.namelist.dyn ] && cp ${EXE_DIR}/*output.nam* ${NEMO_VALIDATION_DIR}/. |
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| 261 | [ -f ${EXE_DIR}/tracer.stat ] && cp ${EXE_DIR}/*tracer.stat ${NEMO_VALIDATION_DIR}/. |
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[4147] | 262 | |
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[11161] | 263 | if [ -n "$(ls ${NEMO_VALIDATION_DIR}/*run*)" ] ; then |
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| 264 | echo "moved run.stat in ${NEMO_VALIDATION_DIR} directory" >> ${SETTE_DIR}/output.sette |
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| 265 | echo "moved run.stat in ${NEMO_VALIDATION_DIR} directory" |
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[3294] | 266 | else |
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[11161] | 267 | echo "problem in looking for run.stat file in ${NEMO_VALIDATION_DIR} directory" >> ${SETTE_DIR}/output.sette |
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| 268 | echo "run.stat IS NOT in ${NEMO_VALIDATION_DIR} directory" |
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[3294] | 269 | fi |
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[11161] | 270 | if [ -n "$(ls ${NEMO_VALIDATION_DIR}/*ocean.output*)" ] ; then |
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| 271 | echo "moved ocean.output in ${NEMO_VALIDATION_DIR} directory" >> ${SETTE_DIR}/output.sette |
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| 272 | echo "moved ocean.output in ${NEMO_VALIDATION_DIR} directory" |
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[3294] | 273 | else |
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[11161] | 274 | echo "problem in looking for ocean.output file in ${NEMO_VALIDATION_DIR} directory" >> ${SETTE_DIR}/output.sette |
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| 275 | echo "ocean.output IS NOT in ${NEMO_VALIDATION_DIR} directory" |
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[3294] | 276 | fi |
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[11161] | 277 | if [ -n "$(ls ${NEMO_VALIDATION_DIR}/*tracer.stat*)" ] ; then |
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| 278 | echo "moved tracer.stat in ${NEMO_VALIDATION_DIR} directory" >> ${SETTE_DIR}/output.sette |
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| 279 | echo "moved tracer.stat in ${NEMO_VALIDATION_DIR} directory" |
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[3294] | 280 | else |
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[11161] | 281 | echo "problem in looking for tracer.stat file in ${NEMO_VALIDATION_DIR} directory" >> ${SETTE_DIR}/output.sette |
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| 282 | echo "tracer.stat IS NOT in ${NEMO_VALIDATION_DIR} directory" |
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[3294] | 283 | fi |
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| 284 | } |
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[4245] | 285 | |
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| 286 | ############################################################# |
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| 287 | # extra functions to manipulate settings in the iodef.xml file |
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| 288 | # |
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| 289 | # Examples: |
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| 290 | # set_xio_file_type iodef.xml one_file |
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| 291 | # set_xio_using_server iodef.xml true |
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| 292 | # set_xio_buffer_size iodef.xml 50000000 |
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[7646] | 293 | # set_xio_field_defs iodef.xml |
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[4245] | 294 | # |
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| 295 | ############################################################# |
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| 296 | |
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| 297 | usage2=" Usage : set_xio_file_type input_iodef.xml one_file||multiple_file" |
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| 298 | usage3=" Usage : set_xio_using_server input_iodef.xml true||false" |
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| 299 | usage4=" Usage : set_xio_buffer_size input_iodef.xml int_buffer_size" |
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[7646] | 300 | usage5=" Usage : set_xio_field_defs input_iodef.xml" |
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[4245] | 301 | |
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| 302 | set_xio_file_type () { |
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| 303 | minargcount=2 |
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| 304 | if [ ${#} -lt ${minargcount} ] |
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| 305 | then |
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| 306 | echo "not enough arguments for set_xio_file_type" |
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| 307 | echo "${usage2}" |
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| 308 | exit 1 |
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| 309 | fi |
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| 310 | if [ $2 != "one_file" ] && [ $2 != "multiple_file" ] |
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| 311 | then |
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| 312 | echo "unrecognised argument for set_xio_file_type" |
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| 313 | echo "${usage2}" |
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| 314 | echo $2 |
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| 315 | exit 1 |
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| 316 | fi |
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| 317 | unset minargcount |
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| 318 | if [ ! -f ${SETTE_DIR}/output.sette ] ; then |
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| 319 | touch ${SETTE_DIR}/output.sette |
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| 320 | fi |
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| 321 | |
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| 322 | echo "executing script : set_xio_file_type $@" >> ${SETTE_DIR}/output.sette |
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| 323 | echo "################" >> ${SETTE_DIR}/output.sette |
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| 324 | |
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| 325 | VAR_NAME=$( grep "^.*<.*file_definition.*type.*=" ${EXE_DIR}/$1 | sed -e "s% *\!.*%%" ) |
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| 326 | if [ ${#VAR_NAME} -eq 0 ] |
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| 327 | then |
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| 328 | echo "doing \"set_xio_file_type $@\". " |
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| 329 | echo "xml_tag: file_definition with variable: type is empty" |
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| 330 | echo "confirm that an appropriate file_definition is in \"${EXE_DIR}/$1\" " |
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| 331 | echo "exit" |
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| 332 | echo "error in executing script : set_xio_file_type $@" >> ${SETTE_DIR}/output.sette |
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| 333 | echo "....." >> ${SETTE_DIR}/output.sette |
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| 334 | exit 1 |
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| 335 | fi |
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| 336 | if [ $2 == "one_file" ] |
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| 337 | then |
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| 338 | sed -e "s:multiple_file:one_file:" ${EXE_DIR}/$1 > ${EXE_DIR}/$1.tmp |
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| 339 | else |
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| 340 | sed -e "s:one_file:multiple_file:" ${EXE_DIR}/$1 > ${EXE_DIR}/$1.tmp |
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| 341 | fi |
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| 342 | mv ${EXE_DIR}/$1.tmp ${EXE_DIR}/$1 |
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| 343 | |
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| 344 | echo "finished script : set_xio_file_type $@" >> ${SETTE_DIR}/output.sette |
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| 345 | echo "++++++++++++++++" >> ${SETTE_DIR}/output.sette |
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| 346 | echo " " >> ${SETTE_DIR}/output.sette |
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| 347 | } |
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| 348 | |
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| 349 | set_xio_using_server () { |
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| 350 | minargcount=2 |
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| 351 | if [ ${#} -lt ${minargcount} ] |
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| 352 | then |
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| 353 | echo "not enough arguments for set_xio_using_server" |
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| 354 | echo "${usage2}" |
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| 355 | exit 1 |
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| 356 | fi |
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| 357 | if [ $2 != "true" ] && [ $2 != "false" ] |
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| 358 | then |
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| 359 | echo "unrecognised argument for set_xio_using_server" |
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| 360 | echo "${usage2}" |
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| 361 | echo $2 |
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| 362 | exit 1 |
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| 363 | fi |
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| 364 | unset minargcount |
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| 365 | if [ ! -f ${SETTE_DIR}/output.sette ] ; then |
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| 366 | touch ${SETTE_DIR}/output.sette |
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| 367 | fi |
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| 368 | |
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| 369 | echo "executing script : set_xio_using_server $@" >> ${SETTE_DIR}/output.sette |
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| 370 | echo "################" >> ${SETTE_DIR}/output.sette |
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| 371 | |
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[7646] | 372 | VAR_NAME=$( grep "^.*<.*variable id.*=.*using_server.*=.*bool" ${EXE_DIR}/$1 | sed -e "s% *\!.*%%" ) |
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[4245] | 373 | if [ ${#VAR_NAME} -eq 0 ] |
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| 374 | then |
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| 375 | echo "doing \"set_xio_using_server $@\". " |
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[7646] | 376 | echo "xml_tag: "variable id=using_server" with variable: bool is empty" |
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[4245] | 377 | echo "confirm that an appropriate variable id is in \"${EXE_DIR}/$1\" " |
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| 378 | echo "exit" |
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| 379 | echo "error in executing script : set_xio_using_server $@" >> ${SETTE_DIR}/output.sette |
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| 380 | echo "....." >> ${SETTE_DIR}/output.sette |
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| 381 | exit 1 |
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| 382 | fi |
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| 383 | if [ $2 == "false" ] |
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| 384 | then |
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| 385 | sed -e "/using_server/s:true:false:" ${EXE_DIR}/$1 > ${EXE_DIR}/$1.tmp |
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| 386 | export USING_MPMD=no |
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| 387 | else |
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| 388 | sed -e "/using_server/s:false:true:" ${EXE_DIR}/$1 > ${EXE_DIR}/$1.tmp |
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| 389 | export USING_MPMD=yes |
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| 390 | fi |
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| 391 | mv ${EXE_DIR}/$1.tmp ${EXE_DIR}/$1 |
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| 392 | |
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| 393 | echo "finished script : set_xio_using_server $@" >> ${SETTE_DIR}/output.sette |
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| 394 | echo "++++++++++++++++" >> ${SETTE_DIR}/output.sette |
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| 395 | echo " " >> ${SETTE_DIR}/output.sette |
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| 396 | } |
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| 397 | |
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| 398 | set_xio_buffer_size () { |
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| 399 | minargcount=2 |
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| 400 | if [ ${#} -lt ${minargcount} ] |
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| 401 | then |
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| 402 | echo "not enough arguments for set_xio_buffer_size" |
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| 403 | echo "${usage4}" |
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| 404 | exit 1 |
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| 405 | fi |
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| 406 | unset minargcount |
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| 407 | if [ ! -f ${SETTE_DIR}/output.sette ] ; then |
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| 408 | touch ${SETTE_DIR}/output.sette |
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| 409 | fi |
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| 410 | |
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| 411 | echo "executing script : set_xio_buffer_size $@" >> ${SETTE_DIR}/output.sette |
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| 412 | echo "################" >> ${SETTE_DIR}/output.sette |
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| 413 | |
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| 414 | VAR_NAME=$( grep "^.*<.*variable id.*=.*buffer_size.*=.*integer" ${EXE_DIR}/$1 | sed -e "s% *\!.*%%" ) |
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| 415 | if [ ${#VAR_NAME} -eq 0 ] |
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| 416 | then |
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| 417 | echo "doing \"set_xio_buffer_size $@\". " |
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| 418 | echo "xml_tag: "variable id=buffer_size" with variable: integer is empty" |
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| 419 | echo "confirm that an appropriate variable id is in \"${EXE_DIR}/$1\" " |
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| 420 | echo "exit" |
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| 421 | echo "error in executing script : set_xio_buffer_size $@" >> ${SETTE_DIR}/output.sette |
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| 422 | echo "....." >> ${SETTE_DIR}/output.sette |
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| 423 | exit 1 |
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| 424 | fi |
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| 425 | sed -e "/buffer_size/s:>.*<:>$2<:" ${EXE_DIR}/$1 > ${EXE_DIR}/$1.tmp |
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| 426 | mv ${EXE_DIR}/$1.tmp ${EXE_DIR}/$1 |
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| 427 | |
---|
| 428 | echo "finished script : set_xio_buffer_size $@" >> ${SETTE_DIR}/output.sette |
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| 429 | echo "++++++++++++++++" >> ${SETTE_DIR}/output.sette |
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| 430 | echo " " >> ${SETTE_DIR}/output.sette |
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| 431 | } |
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| 432 | |
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[7646] | 433 | set_xio_field_defs () { |
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| 434 | minargcount=1 |
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| 435 | if [ ${#} -lt ${minargcount} ] |
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| 436 | then |
---|
| 437 | echo "not enough arguments for set_xio_field_defs" |
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| 438 | echo "${usage5}" |
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| 439 | exit 1 |
---|
| 440 | fi |
---|
| 441 | unset minargcount |
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| 442 | if [ ! -f ${SETTE_DIR}/output.sette ] ; then |
---|
| 443 | touch ${SETTE_DIR}/output.sette |
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| 444 | fi |
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| 445 | |
---|
| 446 | echo "executing script : set_xio_field_defs $@" >> ${SETTE_DIR}/output.sette |
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| 447 | echo "################" >> ${SETTE_DIR}/output.sette |
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| 448 | |
---|
| 449 | |
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[9576] | 450 | [ -f ${EXE_DIR}/field_def_nemo-oce.xml ] || sed -i '/field_def_nemo-oce/d' $1 |
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| 451 | [ -f ${EXE_DIR}/field_def_nemo-ice.xml ] || sed -i '/field_def_nemo-ice/d' $1 |
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[7646] | 452 | [ -f ${EXE_DIR}/field_def_nemo-pisces.xml ] || sed -i '/field_def_nemo-pisces/d' $1 |
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| 453 | |
---|
| 454 | echo "finished script : set_xio_field_defs $@" >> ${SETTE_DIR}/output.sette |
---|
| 455 | echo "++++++++++++++++" >> ${SETTE_DIR}/output.sette |
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| 456 | echo " " >> ${SETTE_DIR}/output.sette |
---|
| 457 | } |
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