[10156] | 1 | MODULE trcini_fabm |
---|
| 2 | !!====================================================================== |
---|
| 3 | !! *** MODULE trcini_fabm *** |
---|
| 4 | !! TOP : initialisation of the FABM tracers |
---|
| 5 | !!====================================================================== |
---|
| 6 | !! History : 2.0 ! 2007-12 (C. Ethe, G. Madec) Original code |
---|
| 7 | !!---------------------------------------------------------------------- |
---|
| 8 | #if defined key_fabm |
---|
| 9 | !!---------------------------------------------------------------------- |
---|
| 10 | !! 'key_fabm' FABM tracers |
---|
| 11 | !!---------------------------------------------------------------------- |
---|
| 12 | !! trc_ini_fabm : FABM model initialisation |
---|
| 13 | !!---------------------------------------------------------------------- |
---|
| 14 | USE par_trc ! TOP parameters |
---|
| 15 | USE oce_trc |
---|
| 16 | USE trc |
---|
| 17 | USE par_fabm |
---|
| 18 | USE trcsms_fabm |
---|
| 19 | USE fabm_config,ONLY: fabm_create_model_from_yaml_file |
---|
| 20 | USE fabm,ONLY: type_external_variable, fabm_initialize_library |
---|
| 21 | USE inputs_fabm,ONLY: initialize_inputs,link_inputs, & |
---|
| 22 | type_input_variable,type_input_data,type_river_data, & |
---|
| 23 | first_input_data,first_river_data |
---|
| 24 | #if defined key_git_version |
---|
| 25 | USE fabm_version,ONLY: fabm_commit_id=>git_commit_id, & |
---|
| 26 | fabm_branch_name=>git_branch_name |
---|
| 27 | USE fabm_types,ONLY: type_version,first_module_version |
---|
| 28 | #endif |
---|
| 29 | |
---|
| 30 | |
---|
| 31 | IMPLICIT NONE |
---|
| 32 | PRIVATE |
---|
| 33 | |
---|
| 34 | #if defined key_git_version |
---|
[10158] | 35 | !#include "gitversion.h90" |
---|
[10156] | 36 | CHARACTER(len=*),parameter :: git_commit_id = _NEMO_COMMIT_ID_ |
---|
| 37 | CHARACTER(len=*),parameter :: git_branch_name = _NEMO_BRANCH_ |
---|
| 38 | #endif |
---|
| 39 | |
---|
| 40 | PUBLIC trc_ini_fabm ! called by trcini.F90 module |
---|
| 41 | PUBLIC nemo_fabm_init |
---|
| 42 | |
---|
| 43 | !!---------------------------------------------------------------------- |
---|
| 44 | !! NEMO/TOP 3.3 , NEMO Consortium (2010) |
---|
| 45 | !! $Id$ |
---|
| 46 | !! Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) |
---|
| 47 | !!---------------------------------------------------------------------- |
---|
| 48 | CONTAINS |
---|
| 49 | |
---|
| 50 | SUBROUTINE nemo_fabm_init() |
---|
| 51 | INTEGER :: jn |
---|
| 52 | INTEGER, PARAMETER :: xml_unit = 1979 |
---|
| 53 | TYPE (type_input_data),POINTER :: input_data |
---|
| 54 | TYPE (type_river_data),POINTER :: river_data |
---|
| 55 | CLASS (type_input_variable),POINTER :: input_pointer |
---|
| 56 | |
---|
| 57 | ! Allow FABM to parse fabm.yaml. This ensures numbers of variables are known. |
---|
| 58 | call fabm_create_model_from_yaml_file(model) |
---|
| 59 | |
---|
| 60 | jp_fabm = size(model%state_variables) |
---|
| 61 | jp_fabm_bottom = size(model%bottom_state_variables) |
---|
| 62 | jp_fabm_surface = size(model%surface_state_variables) |
---|
| 63 | jp_fabm0 = jptra + 1 |
---|
| 64 | jp_fabm1 = jptra + jp_fabm |
---|
| 65 | jp_fabm_m1=jptra |
---|
| 66 | jptra = jptra + jp_fabm |
---|
[10390] | 67 | jp_fabm_2d = size(model%horizontal_diagnostic_variables) |
---|
| 68 | jp_fabm_3d = size(model%diagnostic_variables) |
---|
| 69 | jpdia2d = jpdia2d + jp_fabm_2d |
---|
| 70 | jpdia3d = jpdia3d + jp_fabm_3d |
---|
[10156] | 71 | jpdiabio = jpdiabio + jp_fabm |
---|
| 72 | |
---|
| 73 | !Initialize input data structures. |
---|
| 74 | call initialize_inputs |
---|
| 75 | |
---|
[10390] | 76 | ! Get indexes for select state variables |
---|
| 77 | jp_fabm_chl1 = fabm_state_index( 'P1_Chl' ) |
---|
| 78 | jp_fabm_chl2 = fabm_state_index( 'P2_Chl' ) |
---|
| 79 | jp_fabm_chl3 = fabm_state_index( 'P3_Chl' ) |
---|
| 80 | jp_fabm_chl4 = fabm_state_index( 'P4_Chl' ) |
---|
| 81 | jp_fabm_p1c = fabm_state_index( 'P1_c' ) |
---|
| 82 | jp_fabm_p1n = fabm_state_index( 'P1_n' ) |
---|
| 83 | jp_fabm_p1p = fabm_state_index( 'P1_p' ) |
---|
| 84 | jp_fabm_p1s = fabm_state_index( 'P1_s' ) |
---|
| 85 | jp_fabm_p2c = fabm_state_index( 'P2_c' ) |
---|
| 86 | jp_fabm_p2n = fabm_state_index( 'P2_n' ) |
---|
| 87 | jp_fabm_p2p = fabm_state_index( 'P2_p' ) |
---|
| 88 | jp_fabm_p3c = fabm_state_index( 'P3_c' ) |
---|
| 89 | jp_fabm_p3n = fabm_state_index( 'P3_n' ) |
---|
| 90 | jp_fabm_p3p = fabm_state_index( 'P3_p' ) |
---|
| 91 | jp_fabm_p4c = fabm_state_index( 'P4_c' ) |
---|
| 92 | jp_fabm_p4n = fabm_state_index( 'P4_n' ) |
---|
| 93 | jp_fabm_p4p = fabm_state_index( 'P4_p' ) |
---|
| 94 | jp_fabm_z4c = fabm_state_index( 'Z4_c' ) |
---|
| 95 | jp_fabm_z5c = fabm_state_index( 'Z5_c' ) |
---|
| 96 | jp_fabm_z5n = fabm_state_index( 'Z5_n' ) |
---|
| 97 | jp_fabm_z5p = fabm_state_index( 'Z5_p' ) |
---|
| 98 | jp_fabm_z6c = fabm_state_index( 'Z6_c' ) |
---|
| 99 | jp_fabm_z6n = fabm_state_index( 'Z6_n' ) |
---|
| 100 | jp_fabm_z6p = fabm_state_index( 'Z6_p' ) |
---|
| 101 | jp_fabm_n1p = fabm_state_index( 'N1_p' ) |
---|
| 102 | jp_fabm_n3n = fabm_state_index( 'N3_n' ) |
---|
| 103 | jp_fabm_n4n = fabm_state_index( 'N4_n' ) |
---|
| 104 | jp_fabm_n5s = fabm_state_index( 'N5_s' ) |
---|
| 105 | jp_fabm_o2o = fabm_state_index( 'O2_o' ) |
---|
| 106 | jp_fabm_o3c = fabm_state_index( 'O3_c' ) |
---|
[10728] | 107 | jp_fabm_o3ba = fabm_state_index( 'O3_bioalk' ) |
---|
| 108 | jp_fabm_r4n = fabm_state_index( 'R4_n' ) |
---|
| 109 | jp_fabm_r4c = fabm_state_index( 'R4_c' ) |
---|
| 110 | jp_fabm_r4p = fabm_state_index( 'R4_p' ) |
---|
| 111 | jp_fabm_r6n = fabm_state_index( 'R6_n' ) |
---|
| 112 | jp_fabm_r6c = fabm_state_index( 'R6_c' ) |
---|
| 113 | jp_fabm_r6p = fabm_state_index( 'R6_p' ) |
---|
| 114 | jp_fabm_r6s = fabm_state_index( 'R6_s' ) |
---|
| 115 | jp_fabm_r8n = fabm_state_index( 'R8_n' ) |
---|
| 116 | jp_fabm_r8c = fabm_state_index( 'R8_c' ) |
---|
| 117 | jp_fabm_r8p = fabm_state_index( 'R8_p' ) |
---|
| 118 | jp_fabm_r8s = fabm_state_index( 'R8_s' ) |
---|
[10390] | 119 | |
---|
| 120 | ! Get indexes for select diagnostic variables |
---|
[10728] | 121 | jp_fabm_o3ta = fabm_diag_index( 'O3_TA' ) |
---|
| 122 | jp_fabm_o3ph = fabm_diag_index( 'O3_pH' ) |
---|
| 123 | jp_fabm_o3pc = fabm_diag_index( 'O3_pCO2' ) |
---|
[11545] | 124 | jp_fabm_xeps = fabm_diag_index( 'light_xEPS' ) |
---|
[10728] | 125 | jp_fabm_pgrow = fabm_diag_index( 'p_grow_sum_result' ) |
---|
| 126 | jp_fabm_ploss = fabm_diag_index( 'p_loss_sum_result' ) |
---|
| 127 | |
---|
| 128 | MLD_MAX(:,:) = 0.0 |
---|
| 129 | PGROW_AVG(:,:) = 0.0 |
---|
| 130 | PLOSS_AVG(:,:) = 0.0 |
---|
| 131 | PHYT_AVG(:,:) = 0.0 |
---|
[10390] | 132 | |
---|
[10156] | 133 | IF (lwp) THEN |
---|
| 134 | ! write field_def_fabm.xml on lead process |
---|
| 135 | OPEN(UNIT=xml_unit,FILE='field_def_fabm.xml',ACTION='WRITE',STATUS='REPLACE') |
---|
| 136 | |
---|
| 137 | WRITE (xml_unit,1000) '<field_definition level="1" prec="4" operation="average" enabled=".TRUE." default_value="1.e20" >' |
---|
| 138 | |
---|
| 139 | WRITE (xml_unit,1000) ' <field_group id="ptrc_T" grid_ref="grid_T_3D">' |
---|
| 140 | DO jn=1,jp_fabm |
---|
| 141 | CALL write_variable_xml(xml_unit,model%state_variables(jn)) |
---|
| 142 | #if defined key_trdtrc |
---|
| 143 | CALL write_trends_xml(xml_unit,model%state_variables(jn)) |
---|
| 144 | #endif |
---|
[10390] | 145 | CALL write_25hourm_xml(xml_unit,model%state_variables(jn)) |
---|
| 146 | CALL write_tmb_xml(xml_unit,model%state_variables(jn)) |
---|
[10156] | 147 | END DO |
---|
| 148 | WRITE (xml_unit,1000) ' </field_group>' |
---|
| 149 | |
---|
| 150 | WRITE (xml_unit,1000) ' <field_group id="sf_T" grid_ref="grid_T_2D">' |
---|
| 151 | DO jn=1,jp_fabm_surface |
---|
| 152 | CALL write_variable_xml(xml_unit,model%surface_state_variables(jn)) |
---|
[10390] | 153 | CALL write_25hourm_xml(xml_unit,model%surface_state_variables(jn)) |
---|
[10156] | 154 | END DO |
---|
| 155 | DO jn=1,jp_fabm_bottom |
---|
| 156 | CALL write_variable_xml(xml_unit,model%bottom_state_variables(jn)) |
---|
[10390] | 157 | CALL write_25hourm_xml(xml_unit,model%bottom_state_variables(jn)) |
---|
[10156] | 158 | END DO |
---|
| 159 | WRITE (xml_unit,1000) ' </field_group>' |
---|
| 160 | |
---|
| 161 | WRITE (xml_unit,1000) ' <field_group id="diad_T" grid_ref="grid_T_2D">' |
---|
| 162 | DO jn=1,size(model%diagnostic_variables) |
---|
| 163 | CALL write_variable_xml(xml_unit,model%diagnostic_variables(jn),3) |
---|
[10390] | 164 | CALL write_25hourm_xml(xml_unit,model%diagnostic_variables(jn),3) |
---|
| 165 | CALL write_tmb_xml(xml_unit,model%diagnostic_variables(jn)) |
---|
[10156] | 166 | END DO |
---|
| 167 | DO jn=1,size(model%horizontal_diagnostic_variables) |
---|
| 168 | CALL write_variable_xml(xml_unit,model%horizontal_diagnostic_variables(jn)) |
---|
[10390] | 169 | CALL write_25hourm_xml(xml_unit,model%horizontal_diagnostic_variables(jn)) |
---|
[10156] | 170 | END DO |
---|
| 171 | WRITE (xml_unit,1000) ' </field_group>' |
---|
| 172 | |
---|
| 173 | WRITE (xml_unit,1000) ' <field_group id="fabm_scalar" grid_ref="grid_0">' |
---|
| 174 | DO jn=1,size(model%conserved_quantities) |
---|
| 175 | CALL write_variable_xml(xml_unit,model%conserved_quantities(jn)) |
---|
| 176 | END DO |
---|
| 177 | WRITE (xml_unit,1000) ' </field_group>' |
---|
| 178 | |
---|
| 179 | WRITE (xml_unit,1000) ' <field_group id="fabm_input" grid_ref="grid_T_2D">' |
---|
| 180 | input_data => first_input_data |
---|
| 181 | DO WHILE (ASSOCIATED(input_data)) |
---|
| 182 | input_pointer => input_data |
---|
| 183 | CALL write_input_xml(xml_unit,input_pointer) |
---|
| 184 | input_data => input_data%next |
---|
| 185 | END DO |
---|
| 186 | river_data => first_river_data |
---|
| 187 | DO WHILE (ASSOCIATED(river_data)) |
---|
| 188 | input_pointer => river_data |
---|
| 189 | CALL write_input_xml(xml_unit,input_pointer,3) |
---|
| 190 | river_data => river_data%next |
---|
| 191 | END DO |
---|
| 192 | WRITE (xml_unit,1000) ' </field_group>' |
---|
| 193 | |
---|
| 194 | WRITE (xml_unit,1000) '</field_definition>' |
---|
| 195 | |
---|
| 196 | CLOSE(xml_unit) |
---|
| 197 | END IF |
---|
| 198 | IF( lk_mpp ) CALL mppsync !Ensure field_def_fabm is ready. |
---|
| 199 | |
---|
| 200 | 1000 FORMAT (A) |
---|
| 201 | |
---|
| 202 | END SUBROUTINE nemo_fabm_init |
---|
| 203 | |
---|
| 204 | SUBROUTINE write_variable_xml(xml_unit,variable,flag_grid_ref) |
---|
| 205 | INTEGER,INTENT(IN) :: xml_unit |
---|
| 206 | INTEGER,INTENT(IN),OPTIONAL :: flag_grid_ref |
---|
| 207 | CLASS (type_external_variable),INTENT(IN) :: variable |
---|
| 208 | |
---|
| 209 | CHARACTER(LEN=20) :: missing_value,string_dimensions |
---|
| 210 | INTEGER :: number_dimensions |
---|
| 211 | |
---|
| 212 | ! Check variable dimension for grid_ref specificaiton. |
---|
| 213 | ! Default is to not specify the grid_ref in the field definition. |
---|
| 214 | IF (present(flag_grid_ref)) THEN |
---|
| 215 | number_dimensions=flag_grid_ref |
---|
| 216 | ELSE |
---|
| 217 | number_dimensions=-1 !default, don't specify grid_ref |
---|
| 218 | ENDIF |
---|
| 219 | |
---|
| 220 | WRITE (missing_value,'(E9.3)') variable%missing_value |
---|
| 221 | WRITE (string_dimensions,'(I1)') number_dimensions |
---|
| 222 | SELECT CASE (number_dimensions) |
---|
| 223 | CASE (3) |
---|
| 224 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'" long_name="'//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
---|
| 225 | CASE (2) |
---|
| 226 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'" long_name="'//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_2D"/>' |
---|
| 227 | CASE (0) |
---|
| 228 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'" long_name="'//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="1point"/>' |
---|
| 229 | CASE (-1) |
---|
| 230 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'" long_name="'//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" />' |
---|
| 231 | CASE default |
---|
| 232 | IF(lwp) WRITE(numout,*) ' trc_ini_fabm: Failing to initialise output of variable '//TRIM(variable%name)//': Output of '//TRIM(ADJUSTL(string_dimensions))//'-dimensional variables not supported!!!' |
---|
| 233 | END SELECT |
---|
| 234 | |
---|
| 235 | END SUBROUTINE write_variable_xml |
---|
| 236 | |
---|
[10390] | 237 | SUBROUTINE write_25hourm_xml(xml_unit,variable,flag_grid_ref) |
---|
| 238 | INTEGER,INTENT(IN) :: xml_unit |
---|
| 239 | INTEGER,INTENT(IN),OPTIONAL :: flag_grid_ref |
---|
| 240 | CLASS (type_external_variable),INTENT(IN) :: variable |
---|
| 241 | |
---|
| 242 | CHARACTER(LEN=20) :: missing_value,string_dimensions |
---|
| 243 | INTEGER :: number_dimensions |
---|
| 244 | |
---|
| 245 | ! Check variable dimension for grid_ref specificaiton. |
---|
| 246 | ! Default is to not specify the grid_ref in the field definition. |
---|
| 247 | IF (present(flag_grid_ref)) THEN |
---|
| 248 | number_dimensions=flag_grid_ref |
---|
| 249 | ELSE |
---|
| 250 | number_dimensions=-1 !default, don't specify grid_ref |
---|
| 251 | ENDIF |
---|
| 252 | |
---|
| 253 | WRITE (missing_value,'(E9.3)') 1.e+20 |
---|
| 254 | WRITE (string_dimensions,'(I1)') number_dimensions |
---|
| 255 | SELECT CASE (number_dimensions) |
---|
| 256 | CASE (3) |
---|
| 257 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'25h'//'" long_name="'//TRIM(variable%long_name)//' 25-hour mean'//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
---|
| 258 | CASE (2) |
---|
| 259 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'25h'//'" long_name="'//TRIM(variable%long_name)//' 25-hour mean'//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_2D"/>' |
---|
| 260 | CASE (0) |
---|
| 261 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'25h'//'" long_name="'//TRIM(variable%long_name)//' 25-hour mean'//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="1point"/>' |
---|
| 262 | CASE (-1) |
---|
| 263 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'25h'//'" long_name="'//TRIM(variable%long_name)//' 25-hour mean'//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" />' |
---|
| 264 | CASE default |
---|
| 265 | IF(lwp) WRITE(numout,*) ' trc_ini_fabm: Failing to initialise output of variable '//TRIM(variable%name)//'25h'//': Output of '//TRIM(ADJUSTL(string_dimensions))//'-dimensional variables not supported!!!' |
---|
| 266 | END SELECT |
---|
| 267 | |
---|
| 268 | END SUBROUTINE write_25hourm_xml |
---|
| 269 | |
---|
| 270 | SUBROUTINE write_tmb_xml(xml_unit,variable) |
---|
| 271 | INTEGER,INTENT(IN) :: xml_unit |
---|
| 272 | CLASS (type_external_variable),INTENT(IN) :: variable |
---|
| 273 | |
---|
| 274 | CHARACTER(LEN=20) :: missing_value |
---|
| 275 | |
---|
| 276 | WRITE (missing_value,'(E9.3)') 1.e+20 |
---|
| 277 | WRITE (xml_unit,'(A)') ' <field id="top_'//TRIM(variable%name)//'" long_name="Top-level '//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_2D"/>' |
---|
| 278 | WRITE (xml_unit,'(A)') ' <field id="mid_'//TRIM(variable%name)//'" long_name="Middle-level '//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_2D"/>' |
---|
| 279 | WRITE (xml_unit,'(A)') ' <field id="bot_'//TRIM(variable%name)//'" long_name="Bottom-level '//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_2D"/>' |
---|
| 280 | |
---|
| 281 | END SUBROUTINE write_tmb_xml |
---|
| 282 | |
---|
[10156] | 283 | SUBROUTINE write_trends_xml(xml_unit,variable,flag_grid_ref) |
---|
| 284 | INTEGER,INTENT(IN) :: xml_unit |
---|
| 285 | INTEGER,INTENT(IN),OPTIONAL :: flag_grid_ref |
---|
| 286 | CLASS (type_external_variable),INTENT(IN) :: variable |
---|
| 287 | |
---|
| 288 | INTEGER :: number_dimensions,i |
---|
| 289 | CHARACTER(LEN=20) :: missing_value,string_dimensions |
---|
| 290 | #if defined key_tracer_budget |
---|
| 291 | CHARACTER(LEN=3),DIMENSION(10),PARAMETER :: trd_tags = (/ & |
---|
| 292 | 'LDF','BBL','FOR','ZDF','DMP','SMS','ATF', & |
---|
| 293 | 'RDB','RDN','VMV' /) |
---|
| 294 | CHARACTER(LEN=3),DIMENSION(3),PARAMETER :: trd_e3t_tags = (/ & |
---|
| 295 | 'XAD','YAD','ZAD' /) |
---|
| 296 | #else |
---|
| 297 | CHARACTER(LEN=3),DIMENSION(13),PARAMETER :: trd_tags = (/ & |
---|
| 298 | 'XAD','YAD','ZAD','LDF','BBL','FOR','ZDF','DMP','SMS','ATF', & |
---|
| 299 | 'RDB','RDN','VMV' /) |
---|
| 300 | #endif |
---|
| 301 | |
---|
| 302 | ! Check variable dimension for grid_ref specificaiton. |
---|
| 303 | ! Default is to not specify the grid_ref in the field definition. |
---|
| 304 | IF (present(flag_grid_ref)) THEN |
---|
| 305 | number_dimensions=flag_grid_ref |
---|
| 306 | ELSE |
---|
| 307 | number_dimensions=-1 !default, don't specify grid_ref |
---|
| 308 | ENDIF |
---|
| 309 | |
---|
| 310 | WRITE (missing_value,'(E9.3)') -2.E20 |
---|
| 311 | WRITE (string_dimensions,'(I1)') number_dimensions |
---|
| 312 | SELECT CASE (number_dimensions) |
---|
| 313 | CASE (3) |
---|
| 314 | DO i=1,size(trd_tags) |
---|
[10158] | 315 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(trd_tags(i))//'_'//TRIM(variable%name)//'" long_name="'// & |
---|
| 316 | & TRIM(variable%long_name)//' '//TRIM(trd_tags(i))//' trend" unit="'// & |
---|
| 317 | & TRIM(variable%units)//'/s" default_value="'// & |
---|
| 318 | & TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
---|
[10156] | 319 | END DO |
---|
| 320 | #if defined key_tracer_budget |
---|
| 321 | DO i=1,size(trd_e3t_tags) |
---|
[10158] | 322 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(trd_e3t_tags(i))//'_'//TRIM(variable%name)// & |
---|
| 323 | & '_e3t" long_name="'//TRIM(variable%long_name)//' cell depth integrated '// & |
---|
| 324 | & TRIM(trd_e3t_tags(i))//' trend" unit="'//TRIM(variable%units)//'/s" default_value="'// & |
---|
| 325 | & TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
---|
[10156] | 326 | END DO |
---|
[10158] | 327 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'_e3t" long_name="'//TRIM(variable%long_name)// & |
---|
| 328 | & ' cell depth integrated" unit="'//TRIM(variable%units)//'/s" default_value="'// & |
---|
| 329 | & TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
---|
[10156] | 330 | #endif |
---|
| 331 | CASE (-1) |
---|
| 332 | DO i=1,size(trd_tags) |
---|
[10158] | 333 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(trd_tags(i))//'_'//TRIM(variable%name)//'" long_name="'// & |
---|
| 334 | & TRIM(variable%long_name)//' '//TRIM(trd_tags(i))//' trend" unit="'// & |
---|
| 335 | & TRIM(variable%units)//'/s" default_value="'//TRIM(ADJUSTL(missing_value))//'" />' |
---|
[10156] | 336 | END DO |
---|
| 337 | #if defined key_tracer_budget |
---|
| 338 | DO i=1,size(trd_e3t_tags) |
---|
[10158] | 339 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(trd_e3t_tags(i))//'_'//TRIM(variable%name)// & |
---|
| 340 | & '_e3t" long_name="'//TRIM(variable%long_name)//' cell depth integrated '// & |
---|
| 341 | & TRIM(trd_e3t_tags(i))//' trend" unit="'//TRIM(variable%units)//'/s" default_value="'// & |
---|
| 342 | & TRIM(ADJUSTL(missing_value))//'" />' |
---|
[10156] | 343 | END DO |
---|
[10158] | 344 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'_e3t" long_name="'//TRIM(variable%long_name)// & |
---|
| 345 | & ' cell depth integrated" unit="'//TRIM(variable%units)//'/s" default_value="'// & |
---|
| 346 | & TRIM(ADJUSTL(missing_value))//'" />' |
---|
[10156] | 347 | #endif |
---|
| 348 | CASE default |
---|
[10158] | 349 | IF(lwp) WRITE(numout,*) ' trc_ini_fabm: Failing to initialise trends of variable '//TRIM(variable%name)// & |
---|
| 350 | & ': Output of '//TRIM(ADJUSTL(string_dimensions))//'-dimensional trends not supported!!!' |
---|
[10156] | 351 | END SELECT |
---|
| 352 | |
---|
| 353 | END SUBROUTINE write_trends_xml |
---|
| 354 | |
---|
| 355 | SUBROUTINE write_input_xml(xml_unit,variable,flag_grid_ref) |
---|
| 356 | INTEGER,INTENT(IN) :: xml_unit |
---|
| 357 | INTEGER,INTENT(IN),OPTIONAL :: flag_grid_ref |
---|
| 358 | CLASS(type_input_variable),POINTER,INTENT(IN) :: variable |
---|
| 359 | |
---|
| 360 | INTEGER :: number_dimensions,i |
---|
| 361 | CHARACTER(LEN=20) :: missing_value,string_dimensions |
---|
| 362 | |
---|
| 363 | ! Check variable dimension for grid_ref specificaiton. |
---|
| 364 | ! Default is to not specify the grid_ref in the field definition. |
---|
| 365 | IF (present(flag_grid_ref)) THEN |
---|
| 366 | number_dimensions=flag_grid_ref |
---|
| 367 | ELSE |
---|
| 368 | number_dimensions=-1 !default, don't specify grid_ref |
---|
| 369 | ENDIF |
---|
| 370 | |
---|
| 371 | WRITE (missing_value,'(E9.3)') -2.E20 |
---|
| 372 | WRITE (string_dimensions,'(I1)') number_dimensions |
---|
| 373 | SELECT CASE (number_dimensions) |
---|
| 374 | CASE (3) |
---|
| 375 | WRITE (xml_unit,'(A)') ' <field id="'//'INP_'//TRIM(variable%sf(1)%clvar)//'" long_name="'//TRIM(variable%sf(1)%clvar)//' input" unit="" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
---|
| 376 | CASE (-1) |
---|
| 377 | WRITE (xml_unit,'(A)') ' <field id="'//'INP_'//TRIM(variable%sf(1)%clvar)//'" long_name="'//TRIM(variable%sf(1)%clvar)//' input" unit="" default_value="'//TRIM(ADJUSTL(missing_value))//'" />' |
---|
| 378 | CASE default |
---|
| 379 | IF(lwp) WRITE(numout,*) ' trc_ini_fabm: Failing to initialise input diagnostic of variable '//TRIM(variable%sf(1)%clvar)//': Output of '//TRIM(ADJUSTL(string_dimensions))//'-dimensional diagnostic not supported!!!' |
---|
| 380 | END SELECT |
---|
| 381 | |
---|
| 382 | END SUBROUTINE write_input_xml |
---|
| 383 | |
---|
| 384 | SUBROUTINE trc_ini_fabm |
---|
| 385 | !!---------------------------------------------------------------------- |
---|
| 386 | !! *** trc_ini_fabm *** |
---|
| 387 | !! |
---|
| 388 | !! ** Purpose : initialization for FABM model |
---|
| 389 | !! |
---|
| 390 | !! ** Method : - Read the namcfc namelist and check the parameter values |
---|
| 391 | !!---------------------------------------------------------------------- |
---|
| 392 | #if defined key_git_version |
---|
| 393 | TYPE (type_version),POINTER :: version |
---|
| 394 | #endif |
---|
| 395 | INTEGER :: jn |
---|
| 396 | |
---|
| 397 | ! ! Allocate FABM arrays |
---|
| 398 | IF( trc_sms_fabm_alloc() /= 0 ) CALL ctl_stop( 'STOP', 'trc_ini_fabm: unable to allocate FABM arrays' ) |
---|
| 399 | |
---|
| 400 | IF(lwp) WRITE(numout,*) |
---|
| 401 | IF(lwp) WRITE(numout,*) ' trc_ini_fabm: initialisation of FABM model' |
---|
| 402 | IF(lwp) WRITE(numout,*) ' ~~~~~~~~~~~~~~' |
---|
| 403 | #if defined key_git_version |
---|
| 404 | IF(lwp) WRITE(numout,*) ' NEMO version: ',git_commit_id,' (',git_branch_name,' branch)' |
---|
| 405 | IF(lwp) WRITE(numout,*) ' FABM version: ',fabm_commit_id,' (',fabm_branch_name,' branch)' |
---|
| 406 | #endif |
---|
| 407 | |
---|
| 408 | call fabm_initialize_library() |
---|
| 409 | #if defined key_git_version |
---|
| 410 | version => first_module_version |
---|
| 411 | |
---|
| 412 | do while (associated(version)) |
---|
| 413 | IF(lwp) WRITE(numout,*) ' '//trim(version%module_name)//' version: ',trim(version%version_string) |
---|
| 414 | version => version%next |
---|
| 415 | end do |
---|
| 416 | #endif |
---|
| 417 | |
---|
| 418 | ! Log mapping of FABM states: |
---|
| 419 | IF (lwp) THEN |
---|
| 420 | IF (jp_fabm.gt.0) WRITE(numout,*) " FABM tracers:" |
---|
| 421 | DO jn=1,jp_fabm |
---|
| 422 | WRITE(numout,*) " State",jn,":",trim(model%state_variables(jn)%name), & |
---|
| 423 | " (",trim(model%state_variables(jn)%long_name), & |
---|
| 424 | ") [",trim(model%state_variables(jn)%units),"]" |
---|
| 425 | ENDDO |
---|
| 426 | IF (jp_fabm_surface.gt.0) WRITE(numout,*) "FABM seasurface states:" |
---|
| 427 | DO jn=1,jp_fabm_surface |
---|
| 428 | WRITE(numout,*) " State",jn,":",trim(model%surface_state_variables(jn)%name), & |
---|
| 429 | " (",trim(model%surface_state_variables(jn)%long_name), & |
---|
| 430 | ") [",trim(model%surface_state_variables(jn)%units),"]" |
---|
| 431 | ENDDO |
---|
| 432 | IF (jp_fabm_bottom.gt.0) WRITE(numout,*) "FABM seafloor states:" |
---|
| 433 | DO jn=1,jp_fabm_bottom |
---|
| 434 | WRITE(numout,*) " State",jn,":",trim(model%bottom_state_variables(jn)%name), & |
---|
| 435 | " (",trim(model%bottom_state_variables(jn)%long_name), & |
---|
| 436 | ") [",trim(model%bottom_state_variables(jn)%units),"]" |
---|
| 437 | ENDDO |
---|
| 438 | ENDIF |
---|
| 439 | |
---|
| 440 | END SUBROUTINE trc_ini_fabm |
---|
| 441 | |
---|
[10390] | 442 | INTEGER FUNCTION fabm_state_index( state_name ) |
---|
| 443 | !!---------------------------------------------------------------------- |
---|
| 444 | !! *** fabm_state_index *** |
---|
| 445 | !! |
---|
| 446 | !! ** Purpose : return index of a given FABM state variable |
---|
| 447 | !! |
---|
| 448 | !! ** Method : - loop through state variables until found |
---|
| 449 | !!---------------------------------------------------------------------- |
---|
| 450 | |
---|
| 451 | IMPLICIT NONE |
---|
| 452 | |
---|
| 453 | CHARACTER(LEN=256), INTENT(IN) :: state_name |
---|
| 454 | |
---|
| 455 | INTEGER :: jn |
---|
| 456 | |
---|
| 457 | !!---------------------------------------------------------------------- |
---|
| 458 | |
---|
| 459 | fabm_state_index = -1 |
---|
| 460 | DO jn=1,jp_fabm |
---|
| 461 | IF (TRIM(model%state_variables(jn)%name) == TRIM(state_name)) THEN |
---|
| 462 | fabm_state_index = jn |
---|
| 463 | EXIT |
---|
| 464 | ENDIF |
---|
| 465 | END DO |
---|
| 466 | IF (fabm_state_index == -1) THEN |
---|
[10728] | 467 | CALL ctl_warn( 'Could not find '//TRIM(state_name)//' state variable' ) |
---|
[10390] | 468 | ELSE |
---|
| 469 | IF (lwp) WRITE(numout,*) 'Index for '//TRIM(state_name)//' is: ', fabm_state_index |
---|
| 470 | ENDIF |
---|
| 471 | |
---|
| 472 | END FUNCTION fabm_state_index |
---|
| 473 | |
---|
| 474 | INTEGER FUNCTION fabm_diag_index( diag_name ) |
---|
| 475 | !!---------------------------------------------------------------------- |
---|
| 476 | !! *** fabm_state_index *** |
---|
| 477 | !! |
---|
| 478 | !! ** Purpose : return index of a given FABM diagnostic variable |
---|
| 479 | !! |
---|
| 480 | !! ** Method : - loop through diagnostic variables until found |
---|
| 481 | !!---------------------------------------------------------------------- |
---|
| 482 | |
---|
| 483 | IMPLICIT NONE |
---|
| 484 | |
---|
| 485 | CHARACTER(LEN=256), INTENT(IN) :: diag_name |
---|
| 486 | |
---|
| 487 | INTEGER :: jn |
---|
| 488 | |
---|
| 489 | !!---------------------------------------------------------------------- |
---|
| 490 | |
---|
| 491 | fabm_diag_index = -1 |
---|
| 492 | DO jn = 1, SIZE(model%diagnostic_variables) |
---|
| 493 | IF (TRIM(model%diagnostic_variables(jn)%name) == TRIM(diag_name)) THEN |
---|
| 494 | fabm_diag_index = jn |
---|
| 495 | EXIT |
---|
| 496 | ENDIF |
---|
| 497 | END DO |
---|
| 498 | IF (fabm_diag_index == -1) THEN |
---|
[10728] | 499 | CALL ctl_warn( 'Could not find '//TRIM(diag_name)//' diagnostic' ) |
---|
[10390] | 500 | ELSE |
---|
| 501 | IF (lwp) WRITE(numout,*) 'Index for '//TRIM(diag_name)//' is: ', fabm_diag_index |
---|
| 502 | ENDIF |
---|
| 503 | |
---|
| 504 | END FUNCTION fabm_diag_index |
---|
| 505 | |
---|
[10156] | 506 | #else |
---|
| 507 | !!---------------------------------------------------------------------- |
---|
| 508 | !! Dummy module No FABM model |
---|
| 509 | !!---------------------------------------------------------------------- |
---|
| 510 | CONTAINS |
---|
| 511 | SUBROUTINE nemo_fabm_init |
---|
| 512 | END SUBROUTINE nemo_fabm_init |
---|
| 513 | |
---|
| 514 | SUBROUTINE trc_ini_fabm ! Empty routine |
---|
| 515 | END SUBROUTINE trc_ini_fabm |
---|
| 516 | #endif |
---|
| 517 | |
---|
| 518 | !!====================================================================== |
---|
| 519 | END MODULE trcini_fabm |
---|