[10156] | 1 | MODULE trcini_fabm |
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| 2 | !!====================================================================== |
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| 3 | !! *** MODULE trcini_fabm *** |
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| 4 | !! TOP : initialisation of the FABM tracers |
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| 5 | !!====================================================================== |
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| 6 | !! History : 2.0 ! 2007-12 (C. Ethe, G. Madec) Original code |
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| 7 | !!---------------------------------------------------------------------- |
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| 8 | #if defined key_fabm |
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| 9 | !!---------------------------------------------------------------------- |
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| 10 | !! 'key_fabm' FABM tracers |
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| 11 | !!---------------------------------------------------------------------- |
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| 12 | !! trc_ini_fabm : FABM model initialisation |
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| 13 | !!---------------------------------------------------------------------- |
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| 14 | USE par_trc ! TOP parameters |
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| 15 | USE oce_trc |
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| 16 | USE trc |
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| 17 | USE par_fabm |
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| 18 | USE trcsms_fabm |
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| 19 | USE fabm_config,ONLY: fabm_create_model_from_yaml_file |
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[10308] | 20 | USE fabm,ONLY: type_external_variable, fabm_initialize_library, & |
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| 21 | fabm_get_bulk_diagnostic_data |
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[10156] | 22 | USE inputs_fabm,ONLY: initialize_inputs,link_inputs, & |
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| 23 | type_input_variable,type_input_data,type_river_data, & |
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| 24 | first_input_data,first_river_data |
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| 25 | #if defined key_git_version |
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| 26 | USE fabm_version,ONLY: fabm_commit_id=>git_commit_id, & |
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| 27 | fabm_branch_name=>git_branch_name |
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| 28 | USE fabm_types,ONLY: type_version,first_module_version |
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| 29 | #endif |
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| 30 | |
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| 31 | |
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| 32 | IMPLICIT NONE |
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| 33 | PRIVATE |
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| 34 | |
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| 35 | #if defined key_git_version |
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[10158] | 36 | !#include "gitversion.h90" |
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[10156] | 37 | CHARACTER(len=*),parameter :: git_commit_id = _NEMO_COMMIT_ID_ |
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| 38 | CHARACTER(len=*),parameter :: git_branch_name = _NEMO_BRANCH_ |
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| 39 | #endif |
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| 40 | |
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| 41 | PUBLIC trc_ini_fabm ! called by trcini.F90 module |
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| 42 | PUBLIC nemo_fabm_init |
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| 43 | |
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| 44 | !!---------------------------------------------------------------------- |
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| 45 | !! NEMO/TOP 3.3 , NEMO Consortium (2010) |
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| 46 | !! $Id$ |
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| 47 | !! Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) |
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| 48 | !!---------------------------------------------------------------------- |
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| 49 | CONTAINS |
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| 50 | |
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| 51 | SUBROUTINE nemo_fabm_init() |
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| 52 | INTEGER :: jn |
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| 53 | INTEGER, PARAMETER :: xml_unit = 1979 |
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| 54 | TYPE (type_input_data),POINTER :: input_data |
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| 55 | TYPE (type_river_data),POINTER :: river_data |
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| 56 | CLASS (type_input_variable),POINTER :: input_pointer |
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| 57 | |
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| 58 | ! Allow FABM to parse fabm.yaml. This ensures numbers of variables are known. |
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| 59 | call fabm_create_model_from_yaml_file(model) |
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| 60 | |
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| 61 | jp_fabm = size(model%state_variables) |
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| 62 | jp_fabm_bottom = size(model%bottom_state_variables) |
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| 63 | jp_fabm_surface = size(model%surface_state_variables) |
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| 64 | jp_fabm0 = jptra + 1 |
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| 65 | jp_fabm1 = jptra + jp_fabm |
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| 66 | jp_fabm_m1=jptra |
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| 67 | jptra = jptra + jp_fabm |
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[10308] | 68 | jp_fabm_2d = size(model%horizontal_diagnostic_variables) |
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| 69 | jp_fabm_3d = size(model%diagnostic_variables) |
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| 70 | jpdia2d = jpdia2d + jp_fabm_2d |
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| 71 | jpdia3d = jpdia3d + jp_fabm_3d |
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[10156] | 72 | jpdiabio = jpdiabio + jp_fabm |
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| 73 | |
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| 74 | !Initialize input data structures. |
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| 75 | call initialize_inputs |
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| 76 | |
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[10308] | 77 | ! Get indexes for select state variables |
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| 78 | jp_fabm_chl1 = fabm_state_index( 'P1_Chl' ) |
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| 79 | jp_fabm_chl2 = fabm_state_index( 'P2_Chl' ) |
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| 80 | jp_fabm_chl3 = fabm_state_index( 'P3_Chl' ) |
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| 81 | jp_fabm_chl4 = fabm_state_index( 'P4_Chl' ) |
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| 82 | jp_fabm_p1c = fabm_state_index( 'P1_c' ) |
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| 83 | jp_fabm_p1n = fabm_state_index( 'P1_n' ) |
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| 84 | jp_fabm_p1p = fabm_state_index( 'P1_p' ) |
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| 85 | jp_fabm_p1s = fabm_state_index( 'P1_s' ) |
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| 86 | jp_fabm_p2c = fabm_state_index( 'P2_c' ) |
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| 87 | jp_fabm_p2n = fabm_state_index( 'P2_n' ) |
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| 88 | jp_fabm_p2p = fabm_state_index( 'P2_p' ) |
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| 89 | jp_fabm_p3c = fabm_state_index( 'P3_c' ) |
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| 90 | jp_fabm_p3n = fabm_state_index( 'P3_n' ) |
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| 91 | jp_fabm_p3p = fabm_state_index( 'P3_p' ) |
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| 92 | jp_fabm_p4c = fabm_state_index( 'P4_c' ) |
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| 93 | jp_fabm_p4n = fabm_state_index( 'P4_n' ) |
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| 94 | jp_fabm_p4p = fabm_state_index( 'P4_p' ) |
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| 95 | jp_fabm_z4c = fabm_state_index( 'Z4_c' ) |
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| 96 | jp_fabm_z5c = fabm_state_index( 'Z5_c' ) |
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| 97 | jp_fabm_z5n = fabm_state_index( 'Z5_n' ) |
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| 98 | jp_fabm_z5p = fabm_state_index( 'Z5_p' ) |
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| 99 | jp_fabm_z6c = fabm_state_index( 'Z6_c' ) |
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| 100 | jp_fabm_z6n = fabm_state_index( 'Z6_n' ) |
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| 101 | jp_fabm_z6p = fabm_state_index( 'Z6_p' ) |
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| 102 | jp_fabm_n1p = fabm_state_index( 'N1_p' ) |
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| 103 | jp_fabm_n3n = fabm_state_index( 'N3_n' ) |
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| 104 | jp_fabm_n4n = fabm_state_index( 'N4_n' ) |
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| 105 | jp_fabm_n5s = fabm_state_index( 'N5_s' ) |
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| 106 | jp_fabm_o2o = fabm_state_index( 'O2_o' ) |
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| 107 | jp_fabm_o3c = fabm_state_index( 'O3_c' ) |
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| 108 | jp_fabm_o3a = fabm_state_index( 'O3_bioalk' ) |
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| 109 | |
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| 110 | ! Get indexes for select diagnostic variables |
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| 111 | jp_fabm_o3ph = fabm_diag_index( 'O3_pH' ) |
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| 112 | jp_fabm_o3pc = fabm_diag_index( 'O3_pCO2' ) |
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| 113 | jp_fabm_xeps = fabm_diag_index( 'light_xEPS') |
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| 114 | |
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[10156] | 115 | IF (lwp) THEN |
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| 116 | ! write field_def_fabm.xml on lead process |
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| 117 | OPEN(UNIT=xml_unit,FILE='field_def_fabm.xml',ACTION='WRITE',STATUS='REPLACE') |
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| 118 | |
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| 119 | WRITE (xml_unit,1000) '<field_definition level="1" prec="4" operation="average" enabled=".TRUE." default_value="1.e20" >' |
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| 120 | |
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| 121 | WRITE (xml_unit,1000) ' <field_group id="ptrc_T" grid_ref="grid_T_3D">' |
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| 122 | DO jn=1,jp_fabm |
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| 123 | CALL write_variable_xml(xml_unit,model%state_variables(jn)) |
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| 124 | #if defined key_trdtrc |
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| 125 | CALL write_trends_xml(xml_unit,model%state_variables(jn)) |
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| 126 | #endif |
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[10308] | 127 | CALL write_25hourm_xml(xml_unit,model%state_variables(jn)) |
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| 128 | CALL write_tmb_xml(xml_unit,model%state_variables(jn)) |
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[10156] | 129 | END DO |
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| 130 | WRITE (xml_unit,1000) ' </field_group>' |
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| 131 | |
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| 132 | WRITE (xml_unit,1000) ' <field_group id="sf_T" grid_ref="grid_T_2D">' |
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| 133 | DO jn=1,jp_fabm_surface |
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| 134 | CALL write_variable_xml(xml_unit,model%surface_state_variables(jn)) |
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[10308] | 135 | CALL write_25hourm_xml(xml_unit,model%surface_state_variables(jn)) |
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[10156] | 136 | END DO |
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| 137 | DO jn=1,jp_fabm_bottom |
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| 138 | CALL write_variable_xml(xml_unit,model%bottom_state_variables(jn)) |
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[10308] | 139 | CALL write_25hourm_xml(xml_unit,model%bottom_state_variables(jn)) |
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[10156] | 140 | END DO |
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| 141 | WRITE (xml_unit,1000) ' </field_group>' |
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| 142 | |
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| 143 | WRITE (xml_unit,1000) ' <field_group id="diad_T" grid_ref="grid_T_2D">' |
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| 144 | DO jn=1,size(model%diagnostic_variables) |
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| 145 | CALL write_variable_xml(xml_unit,model%diagnostic_variables(jn),3) |
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[10308] | 146 | CALL write_25hourm_xml(xml_unit,model%diagnostic_variables(jn),3) |
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| 147 | CALL write_tmb_xml(xml_unit,model%diagnostic_variables(jn)) |
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[10156] | 148 | END DO |
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| 149 | DO jn=1,size(model%horizontal_diagnostic_variables) |
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| 150 | CALL write_variable_xml(xml_unit,model%horizontal_diagnostic_variables(jn)) |
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[10308] | 151 | CALL write_25hourm_xml(xml_unit,model%horizontal_diagnostic_variables(jn)) |
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[10156] | 152 | END DO |
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[10308] | 153 | WRITE (xml_unit,'(A)') ' <field id="visib" long_name="visibility" unit="m" default_value="1.e+20" grid_ref="grid_T_3D" />' |
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| 154 | WRITE (xml_unit,'(A)') ' <field id="visib25h" long_name="visibility 25-hour mean" unit="m" default_value="1.e+20" grid_ref="grid_T_3D" />' |
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| 155 | WRITE (xml_unit,'(A)') ' <field id="top_visib" long_name="Top-level visibility" unit="m" default_value="1.e+20" grid_ref="grid_T_2D" />' |
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| 156 | WRITE (xml_unit,'(A)') ' <field id="mid_visib" long_name="Middle-level visibility" unit="m" default_value="1.e+20" grid_ref="grid_T_2D" />' |
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| 157 | WRITE (xml_unit,'(A)') ' <field id="bot_visib" long_name="Bottom-level visibility" unit="m" default_value="1.e+20" grid_ref="grid_T_2D" />' |
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[10156] | 158 | WRITE (xml_unit,1000) ' </field_group>' |
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| 159 | |
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| 160 | WRITE (xml_unit,1000) ' <field_group id="fabm_scalar" grid_ref="grid_0">' |
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| 161 | DO jn=1,size(model%conserved_quantities) |
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| 162 | CALL write_variable_xml(xml_unit,model%conserved_quantities(jn)) |
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| 163 | END DO |
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| 164 | WRITE (xml_unit,1000) ' </field_group>' |
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| 165 | |
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| 166 | WRITE (xml_unit,1000) ' <field_group id="fabm_input" grid_ref="grid_T_2D">' |
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| 167 | input_data => first_input_data |
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| 168 | DO WHILE (ASSOCIATED(input_data)) |
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| 169 | input_pointer => input_data |
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| 170 | CALL write_input_xml(xml_unit,input_pointer) |
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| 171 | input_data => input_data%next |
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| 172 | END DO |
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| 173 | river_data => first_river_data |
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| 174 | DO WHILE (ASSOCIATED(river_data)) |
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| 175 | input_pointer => river_data |
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| 176 | CALL write_input_xml(xml_unit,input_pointer,3) |
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| 177 | river_data => river_data%next |
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| 178 | END DO |
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| 179 | WRITE (xml_unit,1000) ' </field_group>' |
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| 180 | |
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| 181 | WRITE (xml_unit,1000) '</field_definition>' |
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| 182 | |
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| 183 | CLOSE(xml_unit) |
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| 184 | END IF |
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| 185 | IF( lk_mpp ) CALL mppsync !Ensure field_def_fabm is ready. |
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| 186 | |
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| 187 | 1000 FORMAT (A) |
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| 188 | |
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| 189 | END SUBROUTINE nemo_fabm_init |
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| 190 | |
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| 191 | SUBROUTINE write_variable_xml(xml_unit,variable,flag_grid_ref) |
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| 192 | INTEGER,INTENT(IN) :: xml_unit |
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| 193 | INTEGER,INTENT(IN),OPTIONAL :: flag_grid_ref |
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| 194 | CLASS (type_external_variable),INTENT(IN) :: variable |
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| 195 | |
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| 196 | CHARACTER(LEN=20) :: missing_value,string_dimensions |
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| 197 | INTEGER :: number_dimensions |
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| 198 | |
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| 199 | ! Check variable dimension for grid_ref specificaiton. |
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| 200 | ! Default is to not specify the grid_ref in the field definition. |
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| 201 | IF (present(flag_grid_ref)) THEN |
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| 202 | number_dimensions=flag_grid_ref |
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| 203 | ELSE |
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| 204 | number_dimensions=-1 !default, don't specify grid_ref |
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| 205 | ENDIF |
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| 206 | |
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| 207 | WRITE (missing_value,'(E9.3)') variable%missing_value |
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| 208 | WRITE (string_dimensions,'(I1)') number_dimensions |
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| 209 | SELECT CASE (number_dimensions) |
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| 210 | CASE (3) |
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| 211 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'" long_name="'//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
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| 212 | CASE (2) |
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| 213 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'" long_name="'//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_2D"/>' |
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| 214 | CASE (0) |
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| 215 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'" long_name="'//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="1point"/>' |
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| 216 | CASE (-1) |
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| 217 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'" long_name="'//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" />' |
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| 218 | CASE default |
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| 219 | IF(lwp) WRITE(numout,*) ' trc_ini_fabm: Failing to initialise output of variable '//TRIM(variable%name)//': Output of '//TRIM(ADJUSTL(string_dimensions))//'-dimensional variables not supported!!!' |
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| 220 | END SELECT |
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| 221 | |
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| 222 | END SUBROUTINE write_variable_xml |
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| 223 | |
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[10308] | 224 | SUBROUTINE write_25hourm_xml(xml_unit,variable,flag_grid_ref) |
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| 225 | INTEGER,INTENT(IN) :: xml_unit |
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| 226 | INTEGER,INTENT(IN),OPTIONAL :: flag_grid_ref |
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| 227 | CLASS (type_external_variable),INTENT(IN) :: variable |
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| 228 | |
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| 229 | CHARACTER(LEN=20) :: missing_value,string_dimensions |
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| 230 | INTEGER :: number_dimensions |
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| 231 | |
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| 232 | ! Check variable dimension for grid_ref specificaiton. |
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| 233 | ! Default is to not specify the grid_ref in the field definition. |
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| 234 | IF (present(flag_grid_ref)) THEN |
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| 235 | number_dimensions=flag_grid_ref |
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| 236 | ELSE |
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| 237 | number_dimensions=-1 !default, don't specify grid_ref |
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| 238 | ENDIF |
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| 239 | |
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| 240 | WRITE (missing_value,'(E9.3)') 1.e+20 |
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| 241 | WRITE (string_dimensions,'(I1)') number_dimensions |
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| 242 | SELECT CASE (number_dimensions) |
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| 243 | CASE (3) |
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| 244 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'25h'//'" long_name="'//TRIM(variable%long_name)//' 25-hour mean'//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
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| 245 | CASE (2) |
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| 246 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'25h'//'" long_name="'//TRIM(variable%long_name)//' 25-hour mean'//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_2D"/>' |
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| 247 | CASE (0) |
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| 248 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'25h'//'" long_name="'//TRIM(variable%long_name)//' 25-hour mean'//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="1point"/>' |
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| 249 | CASE (-1) |
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| 250 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'25h'//'" long_name="'//TRIM(variable%long_name)//' 25-hour mean'//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" />' |
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| 251 | CASE default |
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| 252 | IF(lwp) WRITE(numout,*) ' trc_ini_fabm: Failing to initialise output of variable '//TRIM(variable%name)//'25h'//': Output of '//TRIM(ADJUSTL(string_dimensions))//'-dimensional variables not supported!!!' |
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| 253 | END SELECT |
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| 254 | |
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| 255 | END SUBROUTINE write_25hourm_xml |
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| 256 | |
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| 257 | SUBROUTINE write_tmb_xml(xml_unit,variable) |
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| 258 | INTEGER,INTENT(IN) :: xml_unit |
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| 259 | CLASS (type_external_variable),INTENT(IN) :: variable |
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| 260 | |
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| 261 | CHARACTER(LEN=20) :: missing_value |
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| 262 | |
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| 263 | WRITE (missing_value,'(E9.3)') 1.e+20 |
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| 264 | WRITE (xml_unit,'(A)') ' <field id="top_'//TRIM(variable%name)//'" long_name="Top-level '//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_2D"/>' |
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| 265 | WRITE (xml_unit,'(A)') ' <field id="mid_'//TRIM(variable%name)//'" long_name="Middle-level '//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_2D"/>' |
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| 266 | WRITE (xml_unit,'(A)') ' <field id="bot_'//TRIM(variable%name)//'" long_name="Bottom-level '//TRIM(variable%long_name)//'" unit="'//TRIM(variable%units)//'" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_2D"/>' |
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| 267 | |
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| 268 | END SUBROUTINE write_tmb_xml |
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| 269 | |
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[10156] | 270 | SUBROUTINE write_trends_xml(xml_unit,variable,flag_grid_ref) |
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| 271 | INTEGER,INTENT(IN) :: xml_unit |
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| 272 | INTEGER,INTENT(IN),OPTIONAL :: flag_grid_ref |
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| 273 | CLASS (type_external_variable),INTENT(IN) :: variable |
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| 274 | |
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| 275 | INTEGER :: number_dimensions,i |
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| 276 | CHARACTER(LEN=20) :: missing_value,string_dimensions |
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| 277 | #if defined key_tracer_budget |
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| 278 | CHARACTER(LEN=3),DIMENSION(10),PARAMETER :: trd_tags = (/ & |
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| 279 | 'LDF','BBL','FOR','ZDF','DMP','SMS','ATF', & |
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| 280 | 'RDB','RDN','VMV' /) |
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| 281 | CHARACTER(LEN=3),DIMENSION(3),PARAMETER :: trd_e3t_tags = (/ & |
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| 282 | 'XAD','YAD','ZAD' /) |
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| 283 | #else |
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| 284 | CHARACTER(LEN=3),DIMENSION(13),PARAMETER :: trd_tags = (/ & |
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| 285 | 'XAD','YAD','ZAD','LDF','BBL','FOR','ZDF','DMP','SMS','ATF', & |
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| 286 | 'RDB','RDN','VMV' /) |
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| 287 | #endif |
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| 288 | |
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| 289 | ! Check variable dimension for grid_ref specificaiton. |
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| 290 | ! Default is to not specify the grid_ref in the field definition. |
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| 291 | IF (present(flag_grid_ref)) THEN |
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| 292 | number_dimensions=flag_grid_ref |
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| 293 | ELSE |
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| 294 | number_dimensions=-1 !default, don't specify grid_ref |
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| 295 | ENDIF |
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| 296 | |
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| 297 | WRITE (missing_value,'(E9.3)') -2.E20 |
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| 298 | WRITE (string_dimensions,'(I1)') number_dimensions |
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| 299 | SELECT CASE (number_dimensions) |
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| 300 | CASE (3) |
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| 301 | DO i=1,size(trd_tags) |
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[10158] | 302 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(trd_tags(i))//'_'//TRIM(variable%name)//'" long_name="'// & |
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| 303 | & TRIM(variable%long_name)//' '//TRIM(trd_tags(i))//' trend" unit="'// & |
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| 304 | & TRIM(variable%units)//'/s" default_value="'// & |
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| 305 | & TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
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[10156] | 306 | END DO |
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| 307 | #if defined key_tracer_budget |
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| 308 | DO i=1,size(trd_e3t_tags) |
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[10158] | 309 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(trd_e3t_tags(i))//'_'//TRIM(variable%name)// & |
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| 310 | & '_e3t" long_name="'//TRIM(variable%long_name)//' cell depth integrated '// & |
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| 311 | & TRIM(trd_e3t_tags(i))//' trend" unit="'//TRIM(variable%units)//'/s" default_value="'// & |
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| 312 | & TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
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[10156] | 313 | END DO |
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[10158] | 314 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'_e3t" long_name="'//TRIM(variable%long_name)// & |
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| 315 | & ' cell depth integrated" unit="'//TRIM(variable%units)//'/s" default_value="'// & |
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| 316 | & TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
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[10156] | 317 | #endif |
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| 318 | CASE (-1) |
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| 319 | DO i=1,size(trd_tags) |
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[10158] | 320 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(trd_tags(i))//'_'//TRIM(variable%name)//'" long_name="'// & |
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| 321 | & TRIM(variable%long_name)//' '//TRIM(trd_tags(i))//' trend" unit="'// & |
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| 322 | & TRIM(variable%units)//'/s" default_value="'//TRIM(ADJUSTL(missing_value))//'" />' |
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[10156] | 323 | END DO |
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| 324 | #if defined key_tracer_budget |
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| 325 | DO i=1,size(trd_e3t_tags) |
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[10158] | 326 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(trd_e3t_tags(i))//'_'//TRIM(variable%name)// & |
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| 327 | & '_e3t" long_name="'//TRIM(variable%long_name)//' cell depth integrated '// & |
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| 328 | & TRIM(trd_e3t_tags(i))//' trend" unit="'//TRIM(variable%units)//'/s" default_value="'// & |
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| 329 | & TRIM(ADJUSTL(missing_value))//'" />' |
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[10156] | 330 | END DO |
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[10158] | 331 | WRITE (xml_unit,'(A)') ' <field id="'//TRIM(variable%name)//'_e3t" long_name="'//TRIM(variable%long_name)// & |
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| 332 | & ' cell depth integrated" unit="'//TRIM(variable%units)//'/s" default_value="'// & |
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| 333 | & TRIM(ADJUSTL(missing_value))//'" />' |
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[10156] | 334 | #endif |
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| 335 | CASE default |
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[10158] | 336 | IF(lwp) WRITE(numout,*) ' trc_ini_fabm: Failing to initialise trends of variable '//TRIM(variable%name)// & |
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| 337 | & ': Output of '//TRIM(ADJUSTL(string_dimensions))//'-dimensional trends not supported!!!' |
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[10156] | 338 | END SELECT |
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| 339 | |
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| 340 | END SUBROUTINE write_trends_xml |
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| 341 | |
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| 342 | SUBROUTINE write_input_xml(xml_unit,variable,flag_grid_ref) |
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| 343 | INTEGER,INTENT(IN) :: xml_unit |
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| 344 | INTEGER,INTENT(IN),OPTIONAL :: flag_grid_ref |
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| 345 | CLASS(type_input_variable),POINTER,INTENT(IN) :: variable |
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| 346 | |
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| 347 | INTEGER :: number_dimensions,i |
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| 348 | CHARACTER(LEN=20) :: missing_value,string_dimensions |
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| 349 | |
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| 350 | ! Check variable dimension for grid_ref specificaiton. |
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| 351 | ! Default is to not specify the grid_ref in the field definition. |
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| 352 | IF (present(flag_grid_ref)) THEN |
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| 353 | number_dimensions=flag_grid_ref |
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| 354 | ELSE |
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| 355 | number_dimensions=-1 !default, don't specify grid_ref |
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| 356 | ENDIF |
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| 357 | |
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| 358 | WRITE (missing_value,'(E9.3)') -2.E20 |
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| 359 | WRITE (string_dimensions,'(I1)') number_dimensions |
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| 360 | SELECT CASE (number_dimensions) |
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| 361 | CASE (3) |
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| 362 | WRITE (xml_unit,'(A)') ' <field id="'//'INP_'//TRIM(variable%sf(1)%clvar)//'" long_name="'//TRIM(variable%sf(1)%clvar)//' input" unit="" default_value="'//TRIM(ADJUSTL(missing_value))//'" grid_ref="grid_T_3D" />' |
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| 363 | CASE (-1) |
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| 364 | WRITE (xml_unit,'(A)') ' <field id="'//'INP_'//TRIM(variable%sf(1)%clvar)//'" long_name="'//TRIM(variable%sf(1)%clvar)//' input" unit="" default_value="'//TRIM(ADJUSTL(missing_value))//'" />' |
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| 365 | CASE default |
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| 366 | IF(lwp) WRITE(numout,*) ' trc_ini_fabm: Failing to initialise input diagnostic of variable '//TRIM(variable%sf(1)%clvar)//': Output of '//TRIM(ADJUSTL(string_dimensions))//'-dimensional diagnostic not supported!!!' |
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| 367 | END SELECT |
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| 368 | |
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| 369 | END SUBROUTINE write_input_xml |
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| 370 | |
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| 371 | SUBROUTINE trc_ini_fabm |
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| 372 | !!---------------------------------------------------------------------- |
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| 373 | !! *** trc_ini_fabm *** |
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| 374 | !! |
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| 375 | !! ** Purpose : initialization for FABM model |
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| 376 | !! |
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| 377 | !! ** Method : - Read the namcfc namelist and check the parameter values |
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| 378 | !!---------------------------------------------------------------------- |
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| 379 | #if defined key_git_version |
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| 380 | TYPE (type_version),POINTER :: version |
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| 381 | #endif |
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| 382 | INTEGER :: jn |
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| 383 | |
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| 384 | ! ! Allocate FABM arrays |
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| 385 | IF( trc_sms_fabm_alloc() /= 0 ) CALL ctl_stop( 'STOP', 'trc_ini_fabm: unable to allocate FABM arrays' ) |
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| 386 | |
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| 387 | IF(lwp) WRITE(numout,*) |
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| 388 | IF(lwp) WRITE(numout,*) ' trc_ini_fabm: initialisation of FABM model' |
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| 389 | IF(lwp) WRITE(numout,*) ' ~~~~~~~~~~~~~~' |
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| 390 | #if defined key_git_version |
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| 391 | IF(lwp) WRITE(numout,*) ' NEMO version: ',git_commit_id,' (',git_branch_name,' branch)' |
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| 392 | IF(lwp) WRITE(numout,*) ' FABM version: ',fabm_commit_id,' (',fabm_branch_name,' branch)' |
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| 393 | #endif |
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| 394 | |
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| 395 | call fabm_initialize_library() |
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| 396 | #if defined key_git_version |
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| 397 | version => first_module_version |
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| 398 | |
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| 399 | do while (associated(version)) |
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| 400 | IF(lwp) WRITE(numout,*) ' '//trim(version%module_name)//' version: ',trim(version%version_string) |
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| 401 | version => version%next |
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| 402 | end do |
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| 403 | #endif |
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| 404 | |
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[10308] | 405 | ! Initialise visibility |
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| 406 | visib(:,:,:) = 1.7 / fabm_get_bulk_diagnostic_data(model, jp_fabm_xeps) |
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| 407 | |
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[10156] | 408 | ! Log mapping of FABM states: |
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| 409 | IF (lwp) THEN |
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| 410 | IF (jp_fabm.gt.0) WRITE(numout,*) " FABM tracers:" |
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| 411 | DO jn=1,jp_fabm |
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| 412 | WRITE(numout,*) " State",jn,":",trim(model%state_variables(jn)%name), & |
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| 413 | " (",trim(model%state_variables(jn)%long_name), & |
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| 414 | ") [",trim(model%state_variables(jn)%units),"]" |
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| 415 | ENDDO |
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| 416 | IF (jp_fabm_surface.gt.0) WRITE(numout,*) "FABM seasurface states:" |
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| 417 | DO jn=1,jp_fabm_surface |
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| 418 | WRITE(numout,*) " State",jn,":",trim(model%surface_state_variables(jn)%name), & |
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| 419 | " (",trim(model%surface_state_variables(jn)%long_name), & |
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| 420 | ") [",trim(model%surface_state_variables(jn)%units),"]" |
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| 421 | ENDDO |
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| 422 | IF (jp_fabm_bottom.gt.0) WRITE(numout,*) "FABM seafloor states:" |
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| 423 | DO jn=1,jp_fabm_bottom |
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| 424 | WRITE(numout,*) " State",jn,":",trim(model%bottom_state_variables(jn)%name), & |
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| 425 | " (",trim(model%bottom_state_variables(jn)%long_name), & |
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| 426 | ") [",trim(model%bottom_state_variables(jn)%units),"]" |
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| 427 | ENDDO |
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| 428 | ENDIF |
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| 429 | |
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| 430 | END SUBROUTINE trc_ini_fabm |
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| 431 | |
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[10308] | 432 | INTEGER FUNCTION fabm_state_index( state_name ) |
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| 433 | !!---------------------------------------------------------------------- |
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| 434 | !! *** fabm_state_index *** |
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| 435 | !! |
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| 436 | !! ** Purpose : return index of a given FABM state variable |
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| 437 | !! |
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| 438 | !! ** Method : - loop through state variables until found |
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| 439 | !!---------------------------------------------------------------------- |
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| 440 | |
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| 441 | IMPLICIT NONE |
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| 442 | |
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| 443 | CHARACTER(LEN=256), INTENT(IN) :: state_name |
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| 444 | |
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| 445 | INTEGER :: jn |
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| 446 | |
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| 447 | !!---------------------------------------------------------------------- |
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| 448 | |
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| 449 | fabm_state_index = -1 |
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| 450 | DO jn=1,jp_fabm |
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| 451 | IF (TRIM(model%state_variables(jn)%name) == TRIM(state_name)) THEN |
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| 452 | fabm_state_index = jn |
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| 453 | EXIT |
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| 454 | ENDIF |
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| 455 | END DO |
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| 456 | IF (fabm_state_index == -1) THEN |
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| 457 | CALL ctl_stop( 'Could not find '//TRIM(state_name)//' state variable' ) |
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| 458 | ELSE |
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| 459 | IF (lwp) WRITE(numout,*) 'Index for '//TRIM(state_name)//' is: ', fabm_state_index |
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| 460 | ENDIF |
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| 461 | |
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| 462 | END FUNCTION fabm_state_index |
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| 463 | |
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| 464 | INTEGER FUNCTION fabm_diag_index( diag_name ) |
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| 465 | !!---------------------------------------------------------------------- |
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| 466 | !! *** fabm_state_index *** |
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| 467 | !! |
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| 468 | !! ** Purpose : return index of a given FABM diagnostic variable |
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| 469 | !! |
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| 470 | !! ** Method : - loop through diagnostic variables until found |
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| 471 | !!---------------------------------------------------------------------- |
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| 472 | |
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| 473 | IMPLICIT NONE |
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| 474 | |
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| 475 | CHARACTER(LEN=256), INTENT(IN) :: diag_name |
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| 476 | |
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| 477 | INTEGER :: jn |
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| 478 | |
---|
| 479 | !!---------------------------------------------------------------------- |
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| 480 | |
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| 481 | fabm_diag_index = -1 |
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| 482 | DO jn = 1, SIZE(model%diagnostic_variables) |
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| 483 | IF (TRIM(model%diagnostic_variables(jn)%name) == TRIM(diag_name)) THEN |
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| 484 | fabm_diag_index = jn |
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| 485 | EXIT |
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| 486 | ENDIF |
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| 487 | END DO |
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| 488 | IF (fabm_diag_index == -1) THEN |
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| 489 | CALL ctl_stop( 'Could not find '//TRIM(diag_name)//' diagnostic' ) |
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| 490 | ELSE |
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| 491 | IF (lwp) WRITE(numout,*) 'Index for '//TRIM(diag_name)//' is: ', fabm_diag_index |
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| 492 | ENDIF |
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| 493 | |
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| 494 | END FUNCTION fabm_diag_index |
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| 495 | |
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[10156] | 496 | #else |
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| 497 | !!---------------------------------------------------------------------- |
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| 498 | !! Dummy module No FABM model |
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| 499 | !!---------------------------------------------------------------------- |
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| 500 | CONTAINS |
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| 501 | SUBROUTINE nemo_fabm_init |
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| 502 | END SUBROUTINE nemo_fabm_init |
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| 503 | |
---|
| 504 | SUBROUTINE trc_ini_fabm ! Empty routine |
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| 505 | END SUBROUTINE trc_ini_fabm |
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| 506 | #endif |
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| 507 | |
---|
| 508 | !!====================================================================== |
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| 509 | END MODULE trcini_fabm |
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