| 1 | MODULE phytoplankton_mod |
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| 2 | !!====================================================================== |
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| 3 | !! *** MODULE phytoplankton_mod *** |
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| 4 | !! Calculates the phytoplankton growth |
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| 5 | !!====================================================================== |
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| 6 | !! History : |
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| 7 | !! - ! 2017-04 (M. Stringer) Code taken from trcbio_medusa.F90 |
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| 8 | !! - ! 2017-08 (A. Yool) Mean mixed layer chlorophyll |
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| 9 | !!---------------------------------------------------------------------- |
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| 10 | #if defined key_medusa |
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| 11 | !!---------------------------------------------------------------------- |
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| 12 | !! MEDUSA bio-model |
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| 13 | !!---------------------------------------------------------------------- |
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| 14 | |
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| 15 | IMPLICIT NONE |
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| 16 | PRIVATE |
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| 17 | |
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| 18 | PUBLIC phytoplankton ! Called in plankton.F90 |
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| 19 | |
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| 20 | !!---------------------------------------------------------------------- |
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| 21 | !! NEMO/TOP 2.0 , LOCEAN-IPSL (2007) |
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| 22 | !! $Id$ |
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| 23 | !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) |
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| 24 | !!---------------------------------------------------------------------- |
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| 25 | |
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| 26 | CONTAINS |
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| 27 | |
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| 28 | SUBROUTINE phytoplankton( jk ) |
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| 29 | !!--------------------------------------------------------------------- |
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| 30 | !! *** ROUTINE phytoplankton *** |
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| 31 | !! This called from PLANKTON and calculates the phytoplankton |
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| 32 | !! growth. |
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| 33 | !!---------------------------------------------------------------------- |
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| 34 | USE bio_medusa_mod, ONLY: fdep1, ffld, ffln2, & |
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| 35 | fjlim_pd, fjlim_pn, & |
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| 36 | fnld, fnln, & |
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| 37 | fprd, fprd_ml, fprds, & |
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| 38 | fprn, fprn_ml, frd, frn, & |
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| 39 | fsin, fsld, fsld2, fthetad, fthetan, & |
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| 40 | ftot_det, ftot_dtc, ftot_pd, & |
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| 41 | ftot_pn, ftot_zme, ftot_zmi, & |
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| 42 | fun_Q10, fun_T, idf, idfval, & |
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| 43 | zchd, zchn, zdet, zdin, zdtc, & |
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| 44 | zfer, zpds, zphd, zphn, zsil, & |
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| 45 | zzme, zzmi, fchl_ml |
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| 46 | USE dom_oce, ONLY: e3t_0, gdepw_0, tmask |
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| 47 | USE in_out_manager, ONLY: lwp, numout |
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| 48 | USE oce, ONLY: tsn |
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| 49 | USE par_kind, ONLY: wp |
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| 50 | USE par_oce, ONLY: jp_tem, jpi, jpim1, jpj, jpjm1 |
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| 51 | USE phycst, ONLY: rsmall |
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| 52 | USE sms_medusa, ONLY: jliebig, jphy, jq10, & |
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| 53 | xald, xaln, xfld, xfln, & |
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| 54 | xnld, xnln, xnsi0, xpar, & |
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| 55 | xsin0, xsld, xthetam, xthetamd, xuif, & |
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| 56 | xvpd, xvpn, xxi |
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| 57 | USE zdfmxl, ONLY: hmld |
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| 58 | USE lbclnk, ONLY: lbc_lnk |
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| 59 | |
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| 60 | !!* Substitution |
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| 61 | # include "domzgr_substitute.h90" |
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| 62 | |
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| 63 | !! Level |
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| 64 | INTEGER, INTENT( in ) :: jk |
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| 65 | |
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| 66 | INTEGER :: ji, jj |
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| 67 | |
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| 68 | REAL(wp), DIMENSION(jpi,jpj) :: faln, fchn, fjln |
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| 69 | REAL(wp), DIMENSION(jpi,jpj) :: fald, fchd, fjld |
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| 70 | REAL(wp) :: fchn1, fchd1 |
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| 71 | !! AXY (03/02/11): add in Liebig terms |
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| 72 | REAL(wp) :: fpnlim, fpdlim |
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| 73 | !! AXY (16/07/09): add in Eppley curve functionality |
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| 74 | REAL(wp) :: xvpnT,xvpdT |
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| 75 | !! silicon cycle |
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| 76 | REAL(wp) :: fnsi |
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| 77 | |
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| 78 | REAL(wp) :: fsin1, fnsi1, fnsi2 |
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| 79 | REAL(wp) :: fq0 |
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| 80 | |
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| 81 | DO jj = 2,jpjm1 |
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| 82 | DO ji = 2,jpim1 |
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| 83 | !! OPEN wet point IF..THEN loop |
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| 84 | if (tmask(ji,jj,jk) == 1) then |
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| 85 | !!---------------------------------------------------------- |
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| 86 | !! Chlorophyll calculations |
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| 87 | !!---------------------------------------------------------- |
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| 88 | !! |
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| 89 | !! non-diatoms |
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| 90 | if (zphn(ji,jj).GT.rsmall) then |
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| 91 | fthetan(ji,jj) = max(tiny(zchn(ji,jj)), & |
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| 92 | (zchn(ji,jj) * xxi) / & |
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| 93 | (zphn(ji,jj) + tiny(zphn(ji,jj)))) |
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| 94 | faln(ji,jj) = xaln * fthetan(ji,jj) |
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| 95 | else |
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| 96 | fthetan(ji,jj) = 0. |
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| 97 | faln(ji,jj) = 0. |
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| 98 | endif |
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| 99 | !! |
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| 100 | !! diatoms |
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| 101 | if (zphd(ji,jj).GT.rsmall) then |
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| 102 | fthetad(ji,jj) = max(tiny(zchd(ji,jj)), & |
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| 103 | (zchd(ji,jj) * xxi) / & |
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| 104 | (zphd(ji,jj) + tiny(zphd(ji,jj)))) |
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| 105 | fald(ji,jj) = xald * fthetad(ji,jj) |
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| 106 | else |
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| 107 | fthetad(ji,jj) = 0. |
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| 108 | fald(ji,jj) = 0. |
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| 109 | endif |
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| 110 | |
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| 111 | # if defined key_debug_medusa |
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| 112 | !! report biological calculations |
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| 113 | if (idf.eq.1.AND.idfval.eq.1) then |
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| 114 | IF (lwp) write (numout,*) '------------------------------' |
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| 115 | IF (lwp) write (numout,*) 'faln(',jk,') = ', faln(ji,jj) |
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| 116 | IF (lwp) write (numout,*) 'fald(',jk,') = ', fald(ji,jj) |
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| 117 | endif |
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| 118 | # endif |
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| 119 | ENDIF |
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| 120 | ENDDO |
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| 121 | ENDDO |
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| 122 | |
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| 123 | DO jj = 2,jpjm1 |
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| 124 | DO ji = 2,jpim1 |
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| 125 | if (tmask(ji,jj,jk) == 1) then |
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| 126 | !!---------------------------------------------------------- |
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| 127 | !! Phytoplankton light limitation |
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| 128 | !!---------------------------------------------------------- |
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| 129 | !! |
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| 130 | !! It is assumed xpar is the depth-averaged (vertical layer) PAR |
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| 131 | !! Light limitation (check self-shading) in W/m2 |
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| 132 | !! |
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| 133 | !! Note that there is no temperature dependence in phytoplankton |
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| 134 | !! growth rate or any other function. |
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| 135 | !! In calculation of Chl/Phy ratio tiny(phyto) is introduced to |
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| 136 | !! avoid NaNs in case of Phy==0. |
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| 137 | !! |
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| 138 | !! fthetad and fthetan are Chl:C ratio (gChl/gC) in diat and |
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| 139 | !! non-diat: |
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| 140 | !! for 1:1 Chl:P ratio (mgChl/mmolN) theta=0.012 |
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| 141 | !! |
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| 142 | !! AXY (16/07/09) |
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| 143 | !! temperature for new Eppley style phytoplankton growth |
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| 144 | fun_T(ji,jj) = 1.066**(1.0 * tsn(ji,jj,jk,jp_tem)) |
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| 145 | !! AXY (16/05/11): add in new Q10 (1.5, not 2.0) for |
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| 146 | !! phytoplankton growth; remin. unaffected |
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| 147 | fun_Q10(ji,jj) = jq10**((tsn(ji,jj,jk,jp_tem) - 0.0) / 10.0) |
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| 148 | if (jphy.eq.1) then |
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| 149 | xvpnT = xvpn * fun_T(ji,jj) |
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| 150 | xvpdT = xvpd * fun_T(ji,jj) |
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| 151 | elseif (jphy.eq.2) then |
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| 152 | xvpnT = xvpn * fun_Q10(ji,jj) |
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| 153 | xvpdT = xvpd * fun_Q10(ji,jj) |
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| 154 | else |
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| 155 | xvpnT = xvpn |
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| 156 | xvpdT = xvpd |
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| 157 | endif |
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| 158 | !! |
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| 159 | !! non-diatoms |
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| 160 | fchn1 = (xvpnT * xvpnT) + & |
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| 161 | (faln(ji,jj) * faln(ji,jj) * xpar(ji,jj,jk) * & |
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| 162 | xpar(ji,jj,jk)) |
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| 163 | if (fchn1.GT.rsmall) then |
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| 164 | fchn(ji,jj) = xvpnT / (sqrt(fchn1) + tiny(fchn1)) |
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| 165 | else |
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| 166 | fchn(ji,jj) = 0. |
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| 167 | endif |
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| 168 | !! non-diatom J term |
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| 169 | fjln(ji,jj) = fchn(ji,jj) * faln(ji,jj) * xpar(ji,jj,jk) |
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| 170 | fjlim_pn(ji,jj) = fjln(ji,jj) / xvpnT |
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| 171 | !! |
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| 172 | !! diatoms |
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| 173 | fchd1 = (xvpdT * xvpdT) + & |
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| 174 | (fald(ji,jj) * fald(ji,jj) * xpar(ji,jj,jk) * & |
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| 175 | xpar(ji,jj,jk)) |
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| 176 | if (fchd1.GT.rsmall) then |
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| 177 | fchd(ji,jj) = xvpdT / (sqrt(fchd1) + tiny(fchd1)) |
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| 178 | else |
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| 179 | fchd(ji,jj) = 0. |
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| 180 | endif |
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| 181 | !! diatom J term |
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| 182 | fjld(ji,jj) = fchd(ji,jj) * fald(ji,jj) * xpar(ji,jj,jk) |
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| 183 | fjlim_pd(ji,jj) = fjld(ji,jj) / xvpdT |
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| 184 | |
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| 185 | # if defined key_debug_medusa |
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| 186 | !! report phytoplankton light limitation |
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| 187 | if (idf.eq.1.AND.idfval.eq.1) then |
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| 188 | IF (lwp) write (numout,*) '------------------------------' |
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| 189 | IF (lwp) write (numout,*) 'fchn(',jk,') = ', fchn(ji,jj) |
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| 190 | IF (lwp) write (numout,*) 'fchd(',jk,') = ', fchd(ji,jj) |
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| 191 | IF (lwp) write (numout,*) 'fjln(',jk,') = ', fjln(ji,jj) |
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| 192 | IF (lwp) write (numout,*) 'fjld(',jk,') = ', fjld(ji,jj) |
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| 193 | endif |
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| 194 | # endif |
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| 195 | ENDIF |
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| 196 | ENDDO |
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| 197 | ENDDO |
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| 198 | |
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| 199 | DO jj = 2,jpjm1 |
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| 200 | DO ji = 2,jpim1 |
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| 201 | if (tmask(ji,jj,jk) == 1) then |
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| 202 | !!---------------------------------------------------------- |
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| 203 | !! Phytoplankton nutrient limitation |
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| 204 | !!---------------------------------------------------------- |
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| 205 | !! |
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| 206 | !! non-diatoms (N, Fe). |
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| 207 | !! non-diatom Qn term |
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| 208 | fnln(ji,jj) = zdin(ji,jj) / (zdin(ji,jj) + xnln) |
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| 209 | !! non-diatom Qf term |
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| 210 | ffln2(ji,jj) = zfer(ji,jj) / (zfer(ji,jj) + xfln) |
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| 211 | !! |
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| 212 | !! diatoms (N, Si, Fe). |
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| 213 | !! diatom Qn term |
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| 214 | fnld(ji,jj) = zdin(ji,jj) / (zdin(ji,jj) + xnld) |
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| 215 | !! diatom Qs term |
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| 216 | fsld(ji,jj) = zsil(ji,jj) / (zsil(ji,jj) + xsld) |
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| 217 | !! diatom Qf term |
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| 218 | ffld(ji,jj) = zfer(ji,jj) / (zfer(ji,jj) + xfld) |
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| 219 | |
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| 220 | # if defined key_debug_medusa |
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| 221 | !! report phytoplankton nutrient limitation |
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| 222 | if (idf.eq.1.AND.idfval.eq.1) then |
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| 223 | IF (lwp) write (numout,*) '------------------------------' |
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| 224 | IF (lwp) write (numout,*) 'fnln(',jk,') = ', fnln(ji,jj) |
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| 225 | IF (lwp) write (numout,*) 'fnld(',jk,') = ', fnld(ji,jj) |
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| 226 | IF (lwp) write (numout,*) 'ffln2(',jk,') = ', ffln2(ji,jj) |
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| 227 | IF (lwp) write (numout,*) 'ffld(',jk,') = ', ffld(ji,jj) |
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| 228 | IF (lwp) write (numout,*) 'fsld(',jk,') = ', fsld(ji,jj) |
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| 229 | endif |
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| 230 | # endif |
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| 231 | ENDIF |
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| 232 | ENDDO |
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| 233 | ENDDO |
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| 234 | |
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| 235 | DO jj = 2,jpjm1 |
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| 236 | DO ji = 2,jpim1 |
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| 237 | if (tmask(ji,jj,jk) == 1) then |
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| 238 | !!---------------------------------------------------------- |
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| 239 | !! Primary production (non-diatoms) |
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| 240 | !! (note: still needs multiplying by phytoplankton |
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| 241 | !! concentration) |
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| 242 | !!---------------------------------------------------------- |
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| 243 | !! |
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| 244 | if (jliebig .eq. 0) then |
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| 245 | !! multiplicative nutrient limitation |
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| 246 | fpnlim = fnln(ji,jj) * ffln2(ji,jj) |
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| 247 | elseif (jliebig .eq. 1) then |
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| 248 | !! Liebig Law (= most limiting) nutrient limitation |
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| 249 | fpnlim = min(fnln(ji,jj), ffln2(ji,jj)) |
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| 250 | endif |
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| 251 | fprn(ji,jj) = fjln(ji,jj) * fpnlim |
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| 252 | ENDIF |
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| 253 | ENDDO |
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| 254 | ENDDO |
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| 255 | |
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| 256 | DO jj = 2,jpjm1 |
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| 257 | DO ji = 2,jpim1 |
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| 258 | if (tmask(ji,jj,jk) == 1) then |
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| 259 | !!---------------------------------------------------------- |
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| 260 | !! Primary production (diatoms) |
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| 261 | !! (note: still needs multiplying by phytoplankton |
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| 262 | !! concentration) |
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| 263 | !! |
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| 264 | !! Production here is split between nitrogen production and |
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| 265 | !! that of silicon; depending upon the "intracellular" ratio |
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| 266 | !! of Si:N, model diatoms will uptake nitrogen/silicon |
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| 267 | !! differentially; this borrows from the diatom model of |
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| 268 | !! Mongin et al. (2006) |
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| 269 | !!---------------------------------------------------------- |
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| 270 | !! |
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| 271 | if (jliebig .eq. 0) then |
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| 272 | !! multiplicative nutrient limitation |
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| 273 | fpdlim = fnld(ji,jj) * ffld(ji,jj) |
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| 274 | elseif (jliebig .eq. 1) then |
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| 275 | !! Liebig Law (= most limiting) nutrient limitation |
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| 276 | fpdlim = min(fnld(ji,jj), ffld(ji,jj)) |
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| 277 | endif |
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| 278 | !! |
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| 279 | if (zphd(ji,jj).GT.rsmall .AND. zpds(ji,jj).GT.rsmall) then |
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| 280 | !! "intracellular" elemental ratios |
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| 281 | ! fsin(ji,jj) = zpds(ji,jj) / (zphd(ji,jj) + & |
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| 282 | ! tiny(zphd(ji,jj))) |
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| 283 | ! fnsi = zphd(ji,jj) / (zpds(ji,jj) + & |
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| 284 | ! tiny(zpds(ji,jj))) |
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| 285 | fsin(ji,jj) = 0.0 |
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| 286 | IF( zphd(ji,jj) .GT. rsmall) fsin(ji,jj) = zpds(ji,jj) / & |
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| 287 | zphd(ji,jj) |
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| 288 | fnsi = 0.0 |
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| 289 | IF( zpds(ji,jj) .GT. rsmall) fnsi = zphd(ji,jj) / & |
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| 290 | zpds(ji,jj) |
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| 291 | !! AXY (23/02/10): these next variables derive from |
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| 292 | !! Mongin et al. (2003) |
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| 293 | fsin1 = 3.0 * xsin0 !! = 0.6 |
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| 294 | fnsi1 = 1.0 / fsin1 !! = 1.667 |
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| 295 | fnsi2 = 1.0 / xsin0 !! = 5.0 |
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| 296 | !! |
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| 297 | !! conditionalities based on ratios |
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| 298 | !! nitrogen (and iron and carbon) |
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| 299 | if (fsin(ji,jj).le.xsin0) then |
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| 300 | fprd(ji,jj) = 0.0 |
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| 301 | fsld2(ji,jj) = 0.0 |
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| 302 | elseif (fsin(ji,jj).lt.fsin1) then |
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| 303 | fprd(ji,jj) = xuif * ((fsin(ji,jj) - xsin0) / & |
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| 304 | (fsin(ji,jj) + & |
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| 305 | tiny(fsin(ji,jj)))) * & |
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| 306 | (fjld(ji,jj) * fpdlim) |
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| 307 | fsld2(ji,jj) = xuif * ((fsin(ji,jj) - xsin0) / & |
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| 308 | (fsin(ji,jj) + & |
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| 309 | tiny(fsin(ji,jj)))) |
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| 310 | elseif (fsin(ji,jj).ge.fsin1) then |
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| 311 | fprd(ji,jj) = (fjld(ji,jj) * fpdlim) |
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| 312 | fsld2(ji,jj) = 1.0 |
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| 313 | endif |
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| 314 | !! |
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| 315 | !! silicon |
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| 316 | if (fsin(ji,jj).lt.fnsi1) then |
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| 317 | fprds(ji,jj) = (fjld(ji,jj) * fsld(ji,jj)) |
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| 318 | elseif (fsin(ji,jj).lt.fnsi2) then |
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| 319 | fprds(ji,jj) = xuif * ((fnsi - xnsi0) / & |
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| 320 | (fnsi + tiny(fnsi))) * & |
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| 321 | (fjld(ji,jj) * fsld(ji,jj)) |
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| 322 | else |
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| 323 | fprds(ji,jj) = 0.0 |
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| 324 | endif |
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| 325 | else |
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| 326 | fsin(ji,jj) = 0.0 |
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| 327 | fnsi = 0.0 |
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| 328 | fprd(ji,jj) = 0.0 |
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| 329 | fsld2(ji,jj) = 0.0 |
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| 330 | fprds(ji,jj) = 0.0 |
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| 331 | endif |
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| 332 | |
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| 333 | # if defined key_debug_medusa |
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| 334 | !! report phytoplankton growth (including diatom silicon |
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| 335 | !! submodel) |
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| 336 | if (idf.eq.1.AND.idfval.eq.1) then |
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| 337 | IF (lwp) write (numout,*) '------------------------------' |
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| 338 | IF (lwp) write (numout,*) 'fsin(',jk,') = ', fsin(ji,jj) |
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| 339 | IF (lwp) write (numout,*) 'fnsi(',jk,') = ', fnsi |
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| 340 | IF (lwp) write (numout,*) 'fsld2(',jk,') = ', fsld2(ji,jj) |
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| 341 | IF (lwp) write (numout,*) 'fprn(',jk,') = ', fprn(ji,jj) |
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| 342 | IF (lwp) write (numout,*) 'fprd(',jk,') = ', fprd(ji,jj) |
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| 343 | IF (lwp) write (numout,*) 'fprds(',jk,') = ', fprds(ji,jj) |
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| 344 | endif |
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| 345 | # endif |
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| 346 | ENDIF |
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| 347 | ENDDO |
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| 348 | ENDDO |
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| 349 | |
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| 350 | DO jj = 2,jpjm1 |
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| 351 | DO ji = 2,jpim1 |
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| 352 | if (tmask(ji,jj,jk) == 1) then |
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| 353 | !!---------------------------------------------------------- |
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| 354 | !! Mixed layer primary production |
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| 355 | !! this block calculates the amount of primary production |
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| 356 | !! that occurs within the upper mixed layer; this allows the |
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| 357 | !! separate diagnosis of "sub-surface" primary production; it |
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| 358 | !! does assume that short-term variability in mixed layer |
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| 359 | !! depth doesn't mess with things though |
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| 360 | !!---------------------------------------------------------- |
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| 361 | !! |
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| 362 | if (fdep1(ji,jj).le.hmld(ji,jj)) then |
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| 363 | !! this level is entirely in the mixed layer |
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| 364 | fq0 = 1.0 |
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| 365 | elseif (fsdepw(ji,jj,jk).ge.hmld(ji,jj)) then |
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| 366 | !! this level is entirely below the mixed layer |
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| 367 | fq0 = 0.0 |
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| 368 | else |
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| 369 | !! this level straddles the mixed layer |
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| 370 | fq0 = (hmld(ji,jj) - fsdepw(ji,jj,jk)) / fse3t(ji,jj,jk) |
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| 371 | endif |
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| 372 | !! |
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| 373 | fprn_ml(ji,jj) = fprn_ml(ji,jj) + (fprn(ji,jj) * zphn(ji,jj) * & |
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| 374 | fse3t(ji,jj,jk) * fq0) |
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| 375 | fprd_ml(ji,jj) = fprd_ml(ji,jj) + (fprd(ji,jj) * zphd(ji,jj) * & |
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| 376 | fse3t(ji,jj,jk) * fq0) |
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| 377 | !! AXY (16/08/17) |
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| 378 | fchl_ml(ji,jj) = fchl_ml(ji,jj) + ((zchn(ji,jj) + zchd(ji,jj)) * & |
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| 379 | (fse3t(ji,jj,jk) * fq0) / hmld(ji,jj)) |
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| 380 | ENDIF |
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| 381 | ENDDO |
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| 382 | ENDDO |
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| 383 | CALL lbc_lnk(fchl_ml(:,:),'T',1. ) |
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| 384 | |
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| 385 | DO jj = 2,jpjm1 |
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| 386 | DO ji = 2,jpim1 |
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| 387 | if (tmask(ji,jj,jk) == 1) then |
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| 388 | !!---------------------------------------------------------- |
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| 389 | !! Vertical Integral -- |
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| 390 | !!---------------------------------------------------------- |
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| 391 | !! vertical integral non-diatom phytoplankton |
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| 392 | ftot_pn(ji,jj) = ftot_pn(ji,jj) + (zphn(ji,jj) * & |
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| 393 | fse3t(ji,jj,jk)) |
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| 394 | !! vertical integral diatom phytoplankton |
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| 395 | ftot_pd(ji,jj) = ftot_pd(ji,jj) + (zphd(ji,jj) * & |
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| 396 | fse3t(ji,jj,jk)) |
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| 397 | !! vertical integral microzooplankton |
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| 398 | ftot_zmi(ji,jj) = ftot_zmi(ji,jj) + (zzmi(ji,jj) * & |
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| 399 | fse3t(ji,jj,jk)) |
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| 400 | !! vertical integral mesozooplankton |
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| 401 | ftot_zme(ji,jj) = ftot_zme(ji,jj) + (zzme(ji,jj) * & |
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| 402 | fse3t(ji,jj,jk)) |
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| 403 | !! vertical integral slow detritus, nitrogen |
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| 404 | ftot_det(ji,jj) = ftot_det(ji,jj) + (zdet(ji,jj) * & |
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| 405 | fse3t(ji,jj,jk)) |
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| 406 | !! vertical integral slow detritus, carbon |
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| 407 | ftot_dtc(ji,jj) = ftot_dtc(ji,jj) + (zdtc(ji,jj) * & |
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| 408 | fse3t(ji,jj,jk)) |
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| 409 | ENDIF |
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| 410 | ENDDO |
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| 411 | ENDDO |
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| 412 | |
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| 413 | DO jj = 2,jpjm1 |
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| 414 | DO ji = 2,jpim1 |
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| 415 | if (tmask(ji,jj,jk) == 1) then |
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| 416 | !!---------------------------------------------------------- |
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| 417 | !! More chlorophyll calculations |
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| 418 | !!---------------------------------------------------------- |
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| 419 | !! |
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| 420 | !! frn(ji,jj) = (xthetam / fthetan(ji,jj)) * & |
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| 421 | !! (fprn(ji,jj) / (fthetan(ji,jj) * xpar(ji,jj,jk))) |
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| 422 | !! frd(ji,jj) = (xthetam / fthetad(ji,jj)) * & |
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| 423 | !! (fprd(ji,jj) / (fthetad(ji,jj) * xpar(ji,jj,jk))) |
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| 424 | frn(ji,jj) = (xthetam * fchn(ji,jj) * fnln(ji,jj) * & |
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| 425 | ffln2(ji,jj)) / (fthetan(ji,jj) + & |
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| 426 | tiny(fthetan(ji,jj))) |
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| 427 | !! AXY (12/05/09): there's potentially a problem here; fsld, |
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| 428 | !! silicic acid limitation, is used in the following line |
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| 429 | !! to regulate chlorophyll growth in a manner that is |
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| 430 | !! inconsistent with its use in the regulation of biomass |
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| 431 | !! growth; the Mongin term term used in growth is more |
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| 432 | !! complex than the simple multiplicative function used |
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| 433 | !! below |
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| 434 | !! frd(ji,jj) = (xthetam * fchd(ji,jj) * fnld(ji,jj) * & |
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| 435 | !! ffld(ji,jj) * fsld(ji,jj)) / & |
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| 436 | !! (fthetad(ji,jj) + tiny(fthetad(ji,jj))) |
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| 437 | !! AXY (12/05/09): this replacement line uses the new |
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| 438 | !! variable, fsld2, to regulate chlorophyll growth |
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| 439 | frd(ji,jj) = (xthetamd * fchd(ji,jj) * fnld(ji,jj) * & |
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| 440 | ffld(ji,jj) * fsld2(ji,jj)) / & |
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| 441 | (fthetad(ji,jj) + tiny(fthetad(ji,jj))) |
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| 442 | |
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| 443 | # if defined key_debug_medusa |
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| 444 | !! report chlorophyll calculations |
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| 445 | if (idf.eq.1.AND.idfval.eq.1) then |
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| 446 | IF (lwp) write (numout,*) '------------------------------' |
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| 447 | IF (lwp) write (numout,*) 'fthetan(',jk,') = ', fthetan(ji,jj) |
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| 448 | IF (lwp) write (numout,*) 'fthetad(',jk,') = ', fthetad(ji,jj) |
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| 449 | IF (lwp) write (numout,*) 'frn(',jk,') = ', frn(ji,jj) |
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| 450 | IF (lwp) write (numout,*) 'frd(',jk,') = ', frd(ji,jj) |
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| 451 | endif |
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| 452 | # endif |
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| 453 | |
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| 454 | ENDIF |
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| 455 | ENDDO |
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| 456 | ENDDO |
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| 457 | |
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| 458 | END SUBROUTINE phytoplankton |
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| 459 | |
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| 460 | #else |
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| 461 | !!====================================================================== |
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| 462 | !! Dummy module : No MEDUSA bio-model |
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| 463 | !!====================================================================== |
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| 464 | CONTAINS |
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| 465 | SUBROUTINE phytoplankton( ) ! Empty routine |
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| 466 | WRITE(*,*) 'phytoplankton: You should not have seen this print! error?' |
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| 467 | END SUBROUTINE phytoplankton |
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| 468 | #endif |
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| 469 | |
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| 470 | !!====================================================================== |
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| 471 | END MODULE phytoplankton_mod |
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