source: trunk/CONFIG/GYRE_LOBSTER/EXP00/namelist.sms.lobster @ 1016

Last change on this file since 1016 was 1016, checked in by cetlod, 13 years ago

renaming the SMS namelists, see ticket 174

File size: 5.0 KB
Line 
1!
2! OPA MODEL specific namelist for LOBSTER1 model (#ifdef key_trc_lobster1)
3! ---------
4!
5!       NATBIO   biological parameters
6!
7! PHYTOPLANKTON
8!  apmin     fixed phytoplancton concentration, mmol/m3
9!  tmumax    maximal phytoplankton growth rate, 2.00/86400 s-1 = 2.314815e-5,
10!  rgamma    phytoplankton exudation fraction, %
11!  fphylab   NH4 fraction of phytoplankton exsudation
12!  tmmaxp    maximal phytoplancton mortality rate, 0.
13!  tmminp    minimal phytoplancton mortality rate, 0.05/86400 s-1 = 20 jours
14!  rcchl     Carbone/Chlorophyl ratio, 60 mgC.mgChla-1
15!  aki       light photosynthesis half saturation constant 6.18 W/m2
16!  toptp     optimal photosynthesis temperature
17!
18! NUTRIENTS
19!  anmin  minimum nutrients concentration, mmol/m3
20!  akno3  nitrate limitation half-saturation value, mmol/m3
21!  aknh4  ammonium limitation half-saturation value, mmol/m3
22!  taunn  nitrification rate, s-1
23!  psinut inhibition of nitrate uptake by ammonium
24!
25! ZOOPLANKTON
26!  azmin  minimum zooplancton concentration, mmol/m3
27!  eggzoo minimum for zooplankton concentration, mmolN.m-3, egg effect
28!  rgz    ivlev coeff for zoo mortality
29!  rppz   zooplankton nominal preference for phytoplancton food, %
30!  taus   specific zooplankton maximal grazing rate, s-1
31!         0.75/86400 s-1=8.680555E-6    1/86400 = 1.15e-5
32!  aks    half-saturation constant for total zooplankton grazing,
33!         mmolN.m-3
34!  rpnaz  non-assimilated phytoplankton by zooplancton, %
35!  rdnaz  non-assimilated detritus by zooplankton, %
36!  tauzn  zooplancton specific excretion rate, 0.1/86400 s-1 = 10 jours
37!  fzoolab NH4 fraction of zooplankton excretion
38!  fdbod  zooplankton mortality fraction that goes to detritus
39!  tmmaxz maximal zooplankton mortality rate
40!  tmminz minimal zooplankton mortality rate,  1 (mmolN/m3)-1 d-1
41!
42! DETRITUS
43!  admin    minimum detritus concentration, mmol/m3
44!  taudn    detritus breakdown rate, 0.1/86400 s-1 = 10 jours
45!  fdetlab  NH4 fraction of detritus dissolution
46!  vsed     detritus sedimentation speed, m/s
47!
48! DOM
49!  taudomn DOM breakdown rate, s-1
50!          slow remineralization rate of semi-labile dom to nh4 (1 month)
51!
52! DIC, ALK
53!  rhocaco3 rain ratio organic carbon vs caco3
54!
55! COEF FOR FLUXES FROM THE APHOTIC LAYER TO THE SEDIMENTS
56!  sedlam     : time coefficient of POC remineralization in sediments, s-1
57!  sedlostpoc : mass of POC lost in sediments
58!  sedcallam  : time coefficient of CaCO3 remineralization in sediments
59!  sedlostcal : mass of CaCO3 lost in sediments
60!
61! GENERAL COEFFICIENTS
62!  redf     redfield ratio (C:N) for phyto
63!  reddom   redfield ratio (C:N) for DOM
64!  redfoxy  redfield ratio (O:N)
65!  slopet   van t Hoff "coefficient"         
66!  tmaxr    maximal damping coeff under euphotic layer, 0.
67!  tminr    minimal damping coeff under euphotic layer
68!  xhr      coeff for martin''s remineralisation profile
69!  xhrc     coeff for martin''s remineralisation profile for CaCO3
70!
71! COEF USED ?
72!  xzki      = 1. ki varies with depth, =0. ki = cte = aki
73!  filmax
74!  toptgz
75!  tmaxgz
76!  anumin
77!  afdmin
78!   rhocaco3 = 0.1
79!   sedcallam = 0.
80!   sedlostcal = 0.
81!   redfoxy = 10.75,
82!   xhrc  = -0.1,
83! avant 21-10-2005:
84!   reddom = 12.
85!
86&natbio
87   apmin = 0.,
88   tmumax= 1.21e-5
89   rgamma= 0.05
90   fphylab = 0.75
91   tmmaxp= 0.0
92   tmminp= 5.8e-7
93   rcchl = 60.
94   aki   = 33.
95   toptp = 0.
96
97   anmin = 0.
98   akno3 = 0.7
99   aknh4 = 0.001
100   taunn = 5.80e-7
101   psinut = 3.
102
103   azmin = 0.
104   eggzoo= 0.0
105   rgz   = 0.
106   rppz  = 0.8
107   taus  = 9.26E-6
108   aks   = 1.
109   rpnaz = 0.3
110   rdnaz = 0.3
111   tauzn = 8.1e-7
112   fzoolab = 0.5
113   fdbod = 0.5
114   tmmaxz= 0.
115   tmminz= 2.31e-6
116
117   admin = 0.
118   taudn = 5.80e-7
119   fdetlab = 0.
120   vsed  = 3.47e-5
121
122   taudomn = 6.43e-8
123
124   sedlam = 3.86e-7
125   sedlostpoc = 0.
126
127   redf  = 6.56
128   reddom = 6.56
129   slopet = 0.
130   tmaxr = 0.
131   tminr = 5.80e-7
132   xhr   = -0.858
133
134   filmax= 0.
135   toptgz= 0.
136   tmaxgz= 0.
137   anumin= 0.
138   afdmin= 0.
139/
140!
141!       NATOPT   optical parameters
142!
143!  xkg0  green absorption coefficient of water
144!  xkr0  red absorption coefficent of water
145!  xkgp  green absorption coefficient of chl
146!  xkrp  red absorption coefficient of chl
147!  xlg   green chl exposant for absorption
148!  xlr   red chl exposant for absorption
149!  rpig  chla/chla+pheo ratio
150!
151&natopt
152   xkg0  = 0.0232
153   xkr0  = 0.225
154   xkgp  = 0.074
155   xkrp  = 0.037
156   xlg   = 0.674
157   xlr   = 0.629
158   rpig  = 0.7
159/
160!
161!       NATDBI   biological diagnostics trends (#ifdef key_trc_diabio)
162!
163!  nwritebio : time step frequency for biological outputs (48 : 1/jour)
164!  ctrbio short title (max 8 characters) for biological trends
165!  ctrbil long title (max 80 characters) for biological trends
166!  ctrbiu unit for biological trends
167!
168 &NATDBI
169   nwritebio =  36
170   ctrbio(1) = 'FNO3PHY'
171   ctrbio(2) = 'FNH4PHY'
172   ctrbio(3) = 'FPHYZOO'
173   ctrbil(1) = 'New primary production'
174   ctrbil(2) = 'Regenerated primary production'
175   ctrbil(3) = 'Grazing'
176   ctrbiu(1) = 'mmole/m3/s'
177   ctrbiu(2) = 'mmole/m3/s'
178   ctrbiu(3) = 'mmole/m3/s'
179 &END
180!
181! &NATGAS
182!   gasfac = 1.7,
183!   igaswind = 2
184!   icice = 2
185! &END
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