CCC$Header$ CCC TOP 1.0 , LOCEAN-IPSL (2005) C This software is governed by CeCILL licence see modipsl/doc/NEMO_CeCILL.txt C --------------------------------------------------------------------------- CDIR$ LIST SUBROUTINE p4zrem #if defined key_passivetrc && defined key_trc_pisces CCC--------------------------------------------------------------------- CCC CCC ROUTINE p4zrem : PISCES MODEL CCC ***************************** CCC CCC PURPOSE : CCC --------- CCC Compute remineralization/scavenging of organic compounds CCC CC INPUT : CC ----- CC common CC all the common defined in opa CC CC CC OUTPUT : : no CC ------ CC CC EXTERNAL : CC -------- CC None CC CC MODIFICATIONS: CC -------------- CC original : 2004 - O. Aumont CC---------------------------------------------------------------------- CC parameters and commons CC ====================== CDIR$ NOLIST USE oce_trc USE trp_trc USE sms IMPLICIT NONE CDIR$ LIST CC---------------------------------------------------------------------- CC local declarations CC ================== INTEGER ji, jj, jk REAL remip,remik,xlam1b REAL xkeq,xfeequi,siremin REAL zsatur,zsatur2,znusil REAL fesatur(jpi,jpj,jpk) CC---------------------------------------------------------------------- CC statement functions CC =================== CDIR$ NOLIST #include "domzgr_substitute.h90" CDIR$ LIST C C Computation of the mean phytoplankton concentration as C a crude estimate of the bacterial biomass C -------------------------------------------------- C DO jj=1,jpj DO ji=1,jpi phymoy(ji,jj)=min((trn(ji,jj,1,jpphy)+trn(ji,jj,1,jpdia)) . ,3.E-6) END DO END DO DO jk = 1,jpk-1 DO jj = 1,jpj DO ji = 1,jpi C C DENITRIFICATION FACTOR COMPUTED FROM O2 LEVELS C ---------------------------------------------- C nitrfac(ji,jj,jk)= & max(0.,0.4*(6.E-6-trn(ji,jj,jk,jpoxy))/(oxymin+ & trn(ji,jj,jk,jpoxy))) nitrfac(ji,jj,jk)=min(1.,nitrfac(ji,jj,jk)) END DO END DO END DO DO jk = 1,jpkm1 DO jj = 1,jpj DO ji = 1,jpi C C DOC ammonification. Depends on depth, phytoplankton biomass C and a limitation term which is supposed to be a parameterization C of the bacterial activity. C ---------------------------------------------------------------- remik= & xremik*rfact2/(rjjss*1.E-6)*tmask(ji,jj,jk) & *xlimbac(ji,jj,jk)*phymoy(ji,jj)*max(0.1 & ,exp(-max(0.,(fsdept(ji,jj,jk)-hmld(ji,jj)))/200.)) # if defined key_off_degrad & *facvol(ji,jj,jk) # endif C C Ammonification in oxic waters with oxygen consumption C ----------------------------------------------------- C olimi(ji,jj,jk)=min((trn(ji,jj,jk,jpoxy)-rtrn)/o2ut, & remik*(1.-nitrfac(ji,jj,jk))*trn(ji,jj,jk,jpdoc)) olimi(ji,jj,jk)=max(0.,olimi(ji,jj,jk)) C C Ammonification in suboxic waters with denitrification C ------------------------------------------------------- C denitr(ji,jj,jk)=min((trn(ji,jj,jk,jpno3)-rtrn)/6.1, & remik*nitrfac(ji,jj,jk)*trn(ji,jj,jk,jpdoc)) END DO END DO END DO DO jk = 1,jpkm1 DO jj = 1,jpj DO ji = 1,jpi C C NH4 nitrification to NO3. Ceased for oxygen concentrations C below 2 umol/L. Inhibited at strong light C ---------------------------------------------------------- C onitr(ji,jj,jk)=nitrif*rfact2/rjjss*trn(ji,jj,jk,jpnh4) & *1./(1.+emoy(ji,jj,jk))*tmask(ji,jj,jk) & *(1.-nitrfac(ji,jj,jk)) # if defined key_off_degrad & *facvol(ji,jj,jk) # endif END DO END DO END DO DO jk = 1,jpkm1 DO jj = 1,jpj DO ji = 1,jpi C C Bacterial uptake of iron. No iron is available in DOC. So C Bacteries are obliged to take up iron from the water. Some C studies (especially at Papa) have shown this uptake to be C significant C ---------------------------------------------------------- C xbactfer(ji,jj,jk)=0.02*20E-6*rfact2 & *prmax(ji,jj,jk)*tmask(ji,jj,jk)*xlimphy(ji,jj,jk) & *xlimdia(ji,jj,jk)*phymoy(ji,jj)*exp(-max & (fsdept(ji,jj,jk)-hmld(ji,jj),0.)/200.) END DO END DO END DO C DO jk = 1,jpkm1 DO jj = 1,jpj DO ji = 1,jpi C C POC disaggregation by turbulence and bacterial activity. C ------------------------------------------------------------- C remip=xremip/rjjss*rfact2*tmask(ji,jj,jk)*(0.25+0.75 & *exp(-max((fsdept(ji,jj,jk)-150.),0.)/1000.)) # if defined key_off_degrad & *facvol(ji,jj,jk) # endif C C POC disaggregation rate is reduced in anoxic zone as shown by C sediment traps data. In oxic area, the exponent of the martin's C law is around -0.87. In anoxic zone, it is around -0.35. This C means a disaggregation constant about 0.5 the value in oxic zones C ----------------------------------------------------------------- C remip=remip*(1.-0.5*nitrfac(ji,jj,jk)) C orem(ji,jj,jk)=remip*trn(ji,jj,jk,jppoc) orem2(ji,jj,jk)=remip*trn(ji,jj,jk,jpgoc) ofer(ji,jj,jk)=remip*trn(ji,jj,jk,jpsfe) ofer2(ji,jj,jk)=remip*trn(ji,jj,jk,jpbfe) C END DO END DO END DO DO jk = 1,jpkm1 DO jj = 1,jpj DO ji = 1,jpi C C Remineralization rate of BSi depedant on T and saturation C --------------------------------------------------------- C zsatur=(sio3eq(ji,jj,jk)-trn(ji,jj,jk,jpsil))/ & (sio3eq(ji,jj,jk)+rtrn) zsatur2=zsatur*(1.+tn(ji,jj,jk)/400.)**2* & (1.+tn(ji,jj,jk)/400.)**2 znusil=0.225*(1.+tn(ji,jj,jk)/15.)*zsatur+0.775 & *exp(9.25*log(zsatur2)) siremin=xsirem/rjjss*rfact2*tmask(ji,jj,jk)*znusil # if defined key_off_degrad & *facvol(ji,jj,jk) # endif C osil(ji,jj,jk)=siremin*trn(ji,jj,jk,jpdsi) END DO END DO END DO DO jk = 1,jpkm1 DO jj = 1,jpj DO ji = 1,jpi C C scavenging rate of iron. this scavenging rate depends on the C load in particles on which they are adsorbed. The C parameterization has been taken from studies on Th C ------------------------------------------------------------ C xkeq=fekeq(ji,jj,jk) fesatur(ji,jj,jk)=0.6E-9 xfeequi=(-(1.+fesatur(ji,jj,jk)*xkeq-xkeq*trn(ji,jj,jk,jpfer))+ & sqrt((1.+fesatur(ji,jj,jk)*xkeq-xkeq*trn(ji,jj,jk,jpfer))**2 & +4.*trn(ji,jj,jk,jpfer)*xkeq))/(2.*xkeq) xlam1b=3E-5+xlam1*(trn(ji,jj,jk,jppoc) & +trn(ji,jj,jk,jpgoc)+trn(ji,jj,jk,jpcal)+ & trn(ji,jj,jk,jpdsi))*1E6 xscave(ji,jj,jk)=xfeequi*xlam1b/rjjss*rfact2*tmask(ji,jj,jk) # if defined key_off_degrad & *facvol(ji,jj,jk) # endif C C Increased scavenging for very high iron concentrations C found near the coasts due to increased lithogenic particles C and let's say it unknown processes (precipitation, ...) C ----------------------------------------------------------- C xaggdfe(ji,jj,jk)=2.*xlam1*rfact2/rjjss*max(0., & (trn(ji,jj,jk,jpfer)*1E9-1.))*trn(ji,jj,jk,jpfer) & *tmask(ji,jj,jk) # if defined key_off_degrad & *facvol(ji,jj,jk) # endif C END DO END DO END DO C #endif RETURN END