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sette.sh in trunk/NEMOGCM/SETTE – NEMO

source: trunk/NEMOGCM/SETTE/sette.sh @ 7722

Last change on this file since 7722 was 7722, checked in by flavoni, 7 years ago

update test for ORCA2_LIM3_OBS, active with pisces

  • Property svn:executable set to *
File size: 54.8 KB
RevLine 
[3520]1#!/bin/bash
[3708]2############################################################
[3520]3# Author : Simona Flavoni for NEMO
[4245]4# Contact: sflod@locean-ipsl.upmc.fr
5# 2013   : A.C. Coward added options for testing with XIOS in dettached mode
[3520]6#
7# sette.sh   : principal script of SET TEsts for NEMO (SETTE)
8# ----------------------------------------------------------------------
9# NEMO/SETTE , NEMO Consortium (2010)
10# Software governed by the CeCILL licence     (NEMOGCM/NEMO_CeCILL.txt)
11# ----------------------------------------------------------------------
12#
13#############################################################
[3532]14#set -x
[3520]15set -o posix
16#set -u
17#set -e
[4245]18# ===========
[3520]19# DESCRIPTION
20# ===========
21#
22# Variables to be checked by user:
23#
[4245]24# COMPILER          : name of compiler as defined in NEMOGCM/ARCH directory
25# BATCH_COMMAND_PAR :  name of the command for submitting parallel batch jobs
26# BATCH_COMMAND_SEQ :  name of the command for submitting sequential batch jobs 
27# INTERACT_FLAG     : flag to run in interactive mode "yes"
28#                           to run in batch mode "no"
29# MPIRUN_FLAG       : flag to run in parallel (MPI) "yes"
30#                           to run in sequential mode (NB_PROC = 1) "no"
31# USING_XIOS        : flag to control the activation of key_iomput
32#                      "yes" to compile using key_iomput and link to the external XIOS library
33#                      "no"  to compile without key_iomput and link to the old IOIPSL library
34# USING_MPMD        : flag to control the use of stand-alone IO servers
35#                     requires USING_XIOS="yes"
36#                      "yes" to run in MPMD (detached) mode with stand-alone IO servers
37#                      "no"  to run in SPMD (attached) mode without separate IO servers
[7698]38# USING_OMP         : flag to control the use of OpenMP parallelization
[4245]39# NUM_XIOSERVERS    : number of stand-alone IO servers to employ
40#                     set to zero if USING_MPMD="no"
[3520]41#
42# Principal script is sette.sh, that calls
43#
[4245]44#  makenemo  : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
45#              and links to opa in ${CONFIG_NAME}/EXP00)
[3520]46#
47#  param.cfg : sets and loads following directories:
48#
[4245]49#   FORCING_DIR         : is the directory for forcing files (tarfile)
50#   INPUT_DIR           : is the directory for input files storing
51#   TMPDIR              : is the temporary directory (if needed)
[3520]52#   NEMO_VALIDATION_DIR : is the validation directory
53#
54#   (NOTE: this file is the same for all configrations to be tested with sette)
55#
[4245]56#   all_functions.sh : loads functions used by sette (note: new functions can be added here)
57#   set_namelist     : function declared in all_functions that sets namelist parameters
58#   post_test_tidyup : creates validation storage directory and copies required output files
59#                      (solver.stat and ocean.output) in it after execution of test.
[3520]60#
[4245]61#  VALIDATION tree is:
[3520]62#
63#   NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
64#
65#  prepare_exe_dir.sh : defines and creates directory where the test is executed
[4245]66#                       execution directory takes name of TEST_NAME defined for every test
67#                       in sette.sh. (each test in executed in its own directory)
[3520]68#
[4245]69#  prepare_job.sh     : to generate the script run_job.sh
[3520]70#
[4245]71#  fcm_job.sh         : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
72#                        see sette.sh and BATCH_TEMPLATE directory
[3520]73#
[4245]74#  NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
75#        can be found paths to the input tar file)
76#  NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
77#        directory
78#  NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
79#        remain in ${NEW_CONF}/EXP00
[3520]80#
[4245]81#  NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
82#        executed commands
[3520]83#
[4245]84#  NOTE: if sette.sh is stopped in output.sette there is written the last command
85#        executed by sette.sh
[3520]86#
[4245]87# example use: ./sette.sh
88#########################################################################################
[3520]89#
[4245]90# Compiler among those in NEMOGCM/ARCH
[7698]91export USING_OMP="no"
92#
93if [ ${USING_OMP} == "yes" ]
94 then
95   COMPILER=ifort_athena_xios_omp
96 else
[7715]97   COMPILER=X64_ADA
[7698]98 fi
[5398]99export BATCH_COMMAND_PAR="llsubmit"
[4245]100export BATCH_COMMAND_SEQ=$BATCH_COMMAND_PAR
[4990]101export INTERACT_FLAG="no"
[4245]102export MPIRUN_FLAG="yes"
103export USING_XIOS="yes"
[3520]104#
[4245]105export DEL_KEYS="key_iomput"
106if [ ${USING_XIOS} == "yes" ] 
107 then
108   export DEL_KEYS=""
109fi
[3520]110#
[4245]111# Settings which control the use of stand alone servers (only relevant if using xios)
[3520]112#
[4245]113export USING_MPMD="no"
114export NUM_XIOSERVERS=4
115export JOB_PREFIX=batch-mpmd
[3520]116#
[4245]117if [ ${USING_MPMD} == "no" ] 
118 then
119   export NUM_XIOSERVERS=0
120   export JOB_PREFIX=batch
121fi
[3520]122#
123#
[4245]124if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no"]
125 then
126   echo "Incompatible choices. MPMD mode requires the XIOS server"
127   exit
128fi
[3520]129#
[7698]130# Settings which control the hybrid parallel execution
131#
132OMP_NTHR=1
133if [ ${USING_OMP} == "yes" ]
134 then
135   OMP_NTHR=8
136fi
[3520]137
138# Directory to run the tests
139SETTE_DIR=$(cd $(dirname "$0"); pwd)
[6460]140MAIN_DIR=$(dirname $SETTE_DIR)
[7715]141CONFIG_DIR0=${MAIN_DIR}/CONFIG
[3520]142TOOLS_DIR=${MAIN_DIR}/TOOLS
143COMPIL_DIR=${TOOLS_DIR}/COMPILE
144
145CMP_NAM=${1:-$COMPILER}
146# Copy job_batch_COMPILER file for specific compiler into job_batch_template
147cd ${SETTE_DIR}
[4245]148cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template || exit
[4316]149# Description of configuration tested:
[7715]150# GYRE_PISCES       :  1 &  2
151# ORCA2_LIM3_PISCES :  3 &  4
152# ORCA2_OFF_PISCES  :  5 &  6
153# AMM12             :  7 &  8
154# SAS               :  9     fos SAS there is no solver so is useless to test REPRO
155# ISOMIP            : 10 & 11
156# ORCA2_LIM3_OBS    : 12
157# ORCA2_AGRIF_LIM3  : 13 & 14
158#                     15 & 16
[4147]159
[7722]160for config in 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
[5836]161
[3520]162do
163
[7715]164# TESTS FOR GYRE_PISCES CONFIGURATION
[3520]165if [ ${config} -eq 1 ] ;  then
[7715]166    ## Restartability tests for GYRE_PISCES
[3520]167    export TEST_NAME="LONG"
[7715]168    cd ${CONFIG_DIR0}
169    . ./makenemo -m ${CMP_NAM} -n GYREPIS_LONG -r GYRE_PISCES -j 8 del_key ${DEL_KEYS}
[3520]170    cd ${SETTE_DIR}
[4252]171    . ./param.cfg
172    . ./all_functions.sh
173    . ./prepare_exe_dir.sh
[3520]174    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]175    NPROC=32
[4245]176    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]177    cd ${EXE_DIR} 
[7715]178    set_namelist namelist_cfg cn_exp \"GYREPIS_LONG\"
[4147]179    set_namelist namelist_cfg nn_it000 1
180    set_namelist namelist_cfg nn_itend 120
181    set_namelist namelist_cfg nn_stock 60
182    set_namelist namelist_cfg ln_clobber .true.
[7646]183    set_namelist namelist_cfg ln_linssh .true.
184    set_namelist namelist_cfg ln_read_cfg .false.
[4318]185    set_namelist namelist_cfg nn_fwb 0
[7646]186    set_namelist namelist_cfg jpni 4
187    set_namelist namelist_cfg jpnj 8
188    set_namelist namelist_cfg jpnij 32
[4245]189    if [ ${USING_MPMD} == "yes" ] ; then
190       set_xio_using_server iodef.xml true
191    else
192       set_xio_using_server iodef.xml false
193    fi
194    cd ${SETTE_DIR}
[7698]195    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]196
197    cd ${SETTE_DIR}
198    export TEST_NAME="SHORT"
[4252]199    . ./prepare_exe_dir.sh
[3520]200    cd ${EXE_DIR}
[7715]201    set_namelist namelist_cfg cn_exp \"GYREPIS_SHORT\"
[4147]202    set_namelist namelist_cfg nn_it000 61
203    set_namelist namelist_cfg nn_itend 120
204    set_namelist namelist_cfg nn_stock 60
205    set_namelist namelist_cfg ln_rstart .true.
206    set_namelist namelist_cfg nn_rstctl 2
207    set_namelist namelist_cfg ln_clobber .true.
[7646]208    set_namelist namelist_cfg ln_linssh .true.
209    set_namelist namelist_cfg ln_read_cfg .false.
[4316]210    set_namelist namelist_cfg nn_fwb 0
[7646]211    set_namelist namelist_cfg jpni 4
212    set_namelist namelist_cfg jpnj 8
213    set_namelist namelist_cfg jpnij 32
[7715]214    set_namelist namelist_cfg cn_ocerst_in \"GYREPIS_LONG_00000060_restart\"
[4245]215    if [ ${USING_MPMD} == "yes" ] ; then
216       set_xio_using_server iodef.xml true
217    else
218       set_xio_using_server iodef.xml false
219    fi
[3537]220    for (( i=1; i<=$NPROC; i++)) ; do
221        L_NPROC=$(( $i - 1 ))
222        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[7715]223        ln -sf ../LONG/GYREPIS_LONG_00000060_restart_${L_NPROC}.nc .
[3537]224    done
[4245]225    if [ ${USING_MPMD} == "yes" ] ; then
226       set_xio_using_server iodef.xml true
227    else
228       set_xio_using_server iodef.xml false
229    fi
[3520]230    cd ${SETTE_DIR}
[7698]231    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]232    cd ${SETTE_DIR}
[3532]233    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]234fi
235
236if [ ${config} -eq 2 ] ;  then
[7715]237    ## Reproducibility tests for GYRE_PISCES
[7646]238    export TEST_NAME="REPRO_4_8"
[7715]239    cd ${CONFIG_DIR0}
240    . ./makenemo -m ${CMP_NAM} -n GYREPIS_32 -r GYRE_PISCES -j 8 del_key ${DEL_KEYS}
[3520]241    cd ${SETTE_DIR}
[4252]242    . ./param.cfg
243    . ./all_functions.sh
244    . ./prepare_exe_dir.sh
[3520]245    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]246    NPROC=32
[4245]247    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]248    cd ${EXE_DIR}
[7715]249    set_namelist namelist_cfg cn_exp \"GYREPIS_48\"
[4147]250    set_namelist namelist_cfg nn_it000 1
251    set_namelist namelist_cfg nn_itend 60
252    set_namelist namelist_cfg nn_fwb 0
253    set_namelist namelist_cfg ln_ctl .false.
254    set_namelist namelist_cfg ln_clobber .true.
[7646]255    set_namelist namelist_cfg ln_linssh .true.
256    set_namelist namelist_cfg ln_read_cfg .false.
257    set_namelist namelist_cfg jpni 4
258    set_namelist namelist_cfg jpnj 8
259    set_namelist namelist_cfg jpnij 32
[4245]260    if [ ${USING_MPMD} == "yes" ] ; then
261       set_xio_using_server iodef.xml true
262    else
263       set_xio_using_server iodef.xml false
264    fi
[3520]265    cd ${SETTE_DIR}
[7698]266    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]267    cd ${SETTE_DIR}
268    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
269
270    cd ${SETTE_DIR}
[7646]271    export TEST_NAME="REPRO_8_4"
[4252]272    . ./prepare_exe_dir.sh
[3680]273    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]274    NPROC=32
[4245]275    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]276    cd ${EXE_DIR}
[7715]277    set_namelist namelist_cfg cn_exp \"GYREPIS_84\"
[4147]278    set_namelist namelist_cfg nn_it000 1
279    set_namelist namelist_cfg nn_itend 60
280    set_namelist namelist_cfg nn_fwb 0
281    set_namelist namelist_cfg ln_ctl .false.
282    set_namelist namelist_cfg ln_clobber .true.
[7646]283    set_namelist namelist_cfg ln_linssh .true.
284    set_namelist namelist_cfg ln_read_cfg .false.
285    set_namelist namelist_cfg jpni 8
286    set_namelist namelist_cfg jpnj 4
287    set_namelist namelist_cfg jpnij 32
[4245]288    if [ ${USING_MPMD} == "yes" ] ; then
289       set_xio_using_server iodef.xml true
290    else
291       set_xio_using_server iodef.xml false
292    fi
[3520]293    cd ${SETTE_DIR}
[7698]294    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]295    cd ${SETTE_DIR}
296    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3532]297
[3520]298fi
299
[7715]300# TESTS FOR ORCA2_LIM3_PISCES CONFIGURATION
[3520]301if [ ${config} -eq 3 ] ;  then
[7646]302    ## Restartability tests for ORCA2_LIM3_PISCES
303    export TEST_NAME="LONG"
[7715]304    cd ${CONFIG_DIR0}
[7646]305    . ./makenemo -m ${CMP_NAM} -n ORCA2LIM3PIS_LONG -r ORCA2_LIM3_PISCES -j 8 del_key ${DEL_KEYS}
306    cd ${SETTE_DIR}
307    . ./param.cfg
308    . ./all_functions.sh
309    . ./prepare_exe_dir.sh
310    JOB_FILE=${EXE_DIR}/run_job.sh
311    NPROC=32
312    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
313    cd ${EXE_DIR}
314    set_namelist namelist_cfg cn_exp \"O2L3P_LONG\"
315    set_namelist namelist_cfg nn_it000 1
316    set_namelist namelist_cfg nn_itend 150
317    set_namelist namelist_cfg nn_stock 75
318    set_namelist namelist_cfg ln_clobber .true.
319    set_namelist namelist_cfg ln_read_cfg .true.
320    set_namelist namelist_cfg ln_linssh .false.
321    set_namelist namelist_cfg nn_fwb 0
322    set_namelist namelist_cfg jpni 4
323    set_namelist namelist_cfg jpnj 8
324    set_namelist namelist_cfg jpnij 32
[4147]325    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]326    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
327    # if not you need input files, and for tests is not necessary
[4147]328    set_namelist namelist_pisces_cfg ln_presatm .false.
329    set_namelist namelist_pisces_cfg ln_varpar .false.
330    set_namelist namelist_pisces_cfg ln_dust .false.
331    set_namelist namelist_pisces_cfg ln_solub .false.
332    set_namelist namelist_pisces_cfg ln_river .false.
333    set_namelist namelist_pisces_cfg ln_ndepo .false.
334    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]335    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]336    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4245]337    if [ ${USING_MPMD} == "yes" ] ; then
338       set_xio_using_server iodef.xml true
339    else
340       set_xio_using_server iodef.xml false
341    fi
[3520]342    cd ${SETTE_DIR}
[7698]343    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3532]344   
345    cd ${SETTE_DIR}
[3520]346    export TEST_NAME="SHORT"
[4252]347    . ./prepare_exe_dir.sh
[3520]348    cd ${EXE_DIR}
[7646]349    set_namelist namelist_cfg cn_exp \"O2L3P_SHORT\"
[4147]350    set_namelist namelist_cfg nn_it000 76
351    set_namelist namelist_cfg nn_itend 150
352    set_namelist namelist_cfg nn_stock 75
353    set_namelist namelist_cfg ln_rstart .true.
354    set_namelist namelist_cfg nn_rstctl 2
355    set_namelist namelist_cfg ln_clobber .true.
[7646]356    set_namelist namelist_cfg ln_read_cfg .true.
357    set_namelist namelist_cfg ln_linssh .false.
[7715]358    set_namelist namelist_cfg ln_icebergs .true.
[4316]359    set_namelist namelist_cfg nn_fwb 0
[7646]360    set_namelist namelist_cfg jpni 4
361    set_namelist namelist_cfg jpnj 8
362    set_namelist namelist_cfg jpnij 32
[4147]363    set_namelist namelist_top_cfg ln_rsttr .true.
364    set_namelist namelist_top_cfg nn_rsttr 2
[7646]365    set_namelist namelist_cfg cn_ocerst_in \"O2L3P_LONG_00000075_restart\"
366    set_namelist namelist_ice_cfg cn_icerst_in \"O2L3P_LONG_00000075_restart_ice\"
367    set_namelist namelist_top_cfg cn_trcrst_in \"O2L3P_LONG_00000075_restart_trc\"
[3520]368    # put ln_ironsed, ln_river, ln_ndepo, ln_dust
369    # if not you need input files, and for tests is not necessary
[4147]370    set_namelist namelist_pisces_cfg ln_presatm .false.
371    set_namelist namelist_pisces_cfg ln_varpar .false.
372    set_namelist namelist_pisces_cfg ln_dust .false.
373    set_namelist namelist_pisces_cfg ln_solub .false.
374    set_namelist namelist_pisces_cfg ln_river .false.
375    set_namelist namelist_pisces_cfg ln_ndepo .false.
376    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]377    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]378    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]379    # put ln_pisdmp to false : no restoring to global mean value
[4147]380    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[3537]381    for (( i=1; i<=$NPROC; i++)) ; do
382        L_NPROC=$(( $i - 1 ))
383        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[7646]384        ln -sf ../LONG/O2L3P_LONG_00000075_restart_${L_NPROC}.nc .
385        ln -sf ../LONG/O2L3P_LONG_00000075_restart_trc_${L_NPROC}.nc .
386        ln -sf ../LONG/O2L3P_LONG_00000075_restart_ice_${L_NPROC}.nc .
[7715]387        ln -sf ../LONG/O2L3P_LONG_icebergs_00000075_restart_${L_NPROC}.nc O2L3P_LONG_00000075_restart_icebergs_${L_NPROC}.nc
[3537]388    done
[4245]389    if [ ${USING_MPMD} == "yes" ] ; then
390       set_xio_using_server iodef.xml true
391    else
392       set_xio_using_server iodef.xml false
393    fi
[3520]394    cd ${SETTE_DIR}
[7698]395    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]396    cd ${SETTE_DIR}
[3532]397    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]398fi
399
[7715]400if [ ${config} -eq 4 ] ;  then
[7646]401    ## Reproducibility tests for ORCA2_LIM3_PISCES
402    export TEST_NAME="REPRO_4_8"
[7715]403    cd ${CONFIG_DIR0}
[7646]404    . ./makenemo -m ${CMP_NAM} -n ORCA2LIM3PIS_32 -r ORCA2_LIM3_PISCES -j 8 del_key ${DEL_KEYS}
[3520]405    cd ${SETTE_DIR}
[4252]406    . ./param.cfg
407    . ./all_functions.sh
408    . ./prepare_exe_dir.sh
[3520]409    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]410    NPROC=32
[4245]411    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]412    cd ${EXE_DIR}
[4147]413    set_namelist namelist_cfg nn_it000 1
414    set_namelist namelist_cfg nn_itend 75
415    set_namelist namelist_cfg nn_fwb 0
416    set_namelist namelist_cfg ln_ctl .false.
417    set_namelist namelist_cfg ln_clobber .true.
[7646]418    set_namelist namelist_cfg ln_read_cfg .true.
419    set_namelist namelist_cfg ln_linssh .false.
[7715]420    set_namelist namelist_cfg ln_icebergs .true.
[4147]421    set_namelist namelist_cfg jpni 4
[7646]422    set_namelist namelist_cfg jpnj 8
423    set_namelist namelist_cfg jpnij 32
[4147]424    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]425    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
426    # if not you need input files, and for tests is not necessary
[4147]427    set_namelist namelist_pisces_cfg ln_presatm .false.
428    set_namelist namelist_pisces_cfg ln_varpar .false.
429    set_namelist namelist_pisces_cfg ln_dust .false.
430    set_namelist namelist_pisces_cfg ln_solub .false.
431    set_namelist namelist_pisces_cfg ln_river .false.
432    set_namelist namelist_pisces_cfg ln_ndepo .false.
433    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]434    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]435    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]436    # put ln_pisdmp to false : no restoring to global mean value
[4147]437    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]438    if [ ${USING_MPMD} == "yes" ] ; then
439       set_xio_using_server iodef.xml true
440    else
441       set_xio_using_server iodef.xml false
442    fi
[3520]443    cd ${SETTE_DIR}
[7698]444    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]445    cd ${SETTE_DIR}
[3532]446    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]447
448    cd ${SETTE_DIR}
[7646]449    export TEST_NAME="REPRO_8_4"
[4252]450    . ./prepare_exe_dir.sh
[3680]451    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]452    NPROC=32
[4245]453    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]454    cd ${EXE_DIR}
[4147]455    set_namelist namelist_cfg nn_it000 1
456    set_namelist namelist_cfg nn_itend 75
457    set_namelist namelist_cfg ln_clobber .true.
[7646]458    set_namelist namelist_cfg ln_read_cfg .true.
[7715]459    set_namelist namelist_cfg ln_linssh .false.
460    set_namelist namelist_cfg ln_icebergs .true.
[4316]461    set_namelist namelist_cfg nn_fwb 0
[7646]462    set_namelist namelist_cfg jpni 8
463    set_namelist namelist_cfg jpnj 4
464    set_namelist namelist_cfg jpnij 32
[4147]465    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]466    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
467    # if not you need input files, and for tests is not necessary
[4147]468    set_namelist namelist_pisces_cfg ln_presatm .false.
469    set_namelist namelist_pisces_cfg ln_varpar .false.
470    set_namelist namelist_pisces_cfg ln_dust .false.
471    set_namelist namelist_pisces_cfg ln_solub .false.
472    set_namelist namelist_pisces_cfg ln_river .false.
473    set_namelist namelist_pisces_cfg ln_ndepo .false.
474    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]475    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]476    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]477    # put ln_pisdmp to false : no restoring to global mean value
[4147]478    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]479    if [ ${USING_MPMD} == "yes" ] ; then
480       set_xio_using_server iodef.xml true
481    else
482       set_xio_using_server iodef.xml false
483    fi
[3520]484    cd ${SETTE_DIR}
[7698]485    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]486    cd ${SETTE_DIR}
487    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
488fi
489
490# TESTS FOR ORCA2_OFF_PISCES CONFIGURATION
[7715]491if [ ${config} -eq 5 ] ;  then
[3520]492    ## Restartability tests for ORCA2_OFF_PISCES
493    export TEST_NAME="LONG"
[7715]494    cd ${CONFIG_DIR0}
[7646]495    . ./makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_LONG -r ORCA2_OFF_PISCES -j 8 del_key ${DEL_KEYS}
[3520]496    cd ${SETTE_DIR}
[4252]497    . ./param.cfg
498    . ./all_functions.sh
499    . ./prepare_exe_dir.sh
[3520]500    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]501    NPROC=32
[4245]502    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]503    cd ${EXE_DIR}
[4147]504    set_namelist namelist_cfg cn_exp \"OFFP_LONG\"
505    set_namelist namelist_cfg nn_it000 1
506    set_namelist namelist_cfg nn_itend 40
507    set_namelist namelist_cfg nn_stock 20
508    set_namelist namelist_cfg ln_clobber .true.
[7646]509    set_namelist namelist_cfg ln_read_cfg .true.
510    set_namelist namelist_cfg ln_linssh .true.
511    set_namelist namelist_cfg jpni 4
512    set_namelist namelist_cfg jpnj 8
513    set_namelist namelist_cfg jpnij 32
[4147]514    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]515    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
516    # if not you need input files, and for tests is not necessary
[4147]517    set_namelist namelist_pisces_cfg ln_presatm .false.
518    set_namelist namelist_pisces_cfg ln_varpar .false.
519    set_namelist namelist_pisces_cfg ln_dust .false.
520    set_namelist namelist_pisces_cfg ln_solub .false.
521    set_namelist namelist_pisces_cfg ln_river .false.
522    set_namelist namelist_pisces_cfg ln_ndepo .false.
523    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]524    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]525    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]526    # put ln_pisdmp to false : no restoring to global mean value
[4147]527    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]528    if [ ${USING_MPMD} == "yes" ] ; then
529       set_xio_using_server iodef.xml true
530    else
531       set_xio_using_server iodef.xml false
532    fi
[3520]533    cd ${SETTE_DIR}
[7698]534    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]535   
536    cd ${SETTE_DIR}
537    export TEST_NAME="SHORT"
[4252]538    . ./prepare_exe_dir.sh
[3520]539    cd ${EXE_DIR}
[4147]540    set_namelist namelist_cfg cn_exp \"OFFP_SHORT\"
541    set_namelist namelist_cfg nn_it000 21
542    set_namelist namelist_cfg nn_itend 40
543    set_namelist namelist_cfg nn_stock 20
544    set_namelist namelist_cfg ln_clobber .true.
[7646]545    set_namelist namelist_cfg ln_read_cfg .true.
546    set_namelist namelist_cfg ln_linssh .true.
547    set_namelist namelist_cfg jpni 4
548    set_namelist namelist_cfg jpnj 8
549    set_namelist namelist_cfg jpnij 32
[4147]550    set_namelist namelist_top_cfg ln_rsttr .true.
551    set_namelist namelist_top_cfg nn_rsttr 2
552    set_namelist namelist_top_cfg cn_trcrst_in \"OFFP_LONG_00000020_restart_trc\"
[3537]553    for (( i=1; i<=$NPROC; i++)) ; do
554        L_NPROC=$(( $i - 1 ))
555        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[3555]556        ln -sf ../LONG/OFFP_LONG_00000020_restart_trc_${L_NPROC}.nc .
[3537]557    done
[3520]558    # put ln_ironsed, ln_river, ln_ndepo, ln_dust
559    # if not you need input files, and for tests is not necessary
[4147]560    set_namelist namelist_pisces_cfg ln_presatm .false.
561    set_namelist namelist_pisces_cfg ln_varpar .false.
562    set_namelist namelist_pisces_cfg ln_dust .false.
563    set_namelist namelist_pisces_cfg ln_solub .false.
564    set_namelist namelist_pisces_cfg ln_river .false.
565    set_namelist namelist_pisces_cfg ln_ndepo .false.
566    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]567    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]568    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]569    # put ln_pisdmp to false : no restoring to global mean value
[4147]570    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]571    if [ ${USING_MPMD} == "yes" ] ; then
572       set_xio_using_server iodef.xml true
573    else
574       set_xio_using_server iodef.xml false
575    fi
[3520]576    cd ${SETTE_DIR}
[7698]577    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME}  ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]578    cd ${SETTE_DIR}
579    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
580fi
581
[7715]582if [ ${config} -eq 6 ] ;  then
[3680]583    ## Reproducibility tests for ORCA2_OFF_PISCES
[7646]584    export TEST_NAME="REPRO_4_8"
[7715]585    cd ${CONFIG_DIR0}
[7646]586    . ./makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_32 -r ORCA2_OFF_PISCES -j 8 del_key ${DEL_KEYS}
[3520]587    cd ${SETTE_DIR}
[4252]588    . ./param.cfg
589    . ./all_functions.sh
590    . ./prepare_exe_dir.sh
[3520]591    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]592    NPROC=32
[4245]593    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]594    cd ${EXE_DIR}
[4147]595    set_namelist namelist_cfg nn_it000 1
596    set_namelist namelist_cfg nn_itend 40
597    set_namelist namelist_cfg ln_ctl .false.
598    set_namelist namelist_cfg ln_clobber .true.
[7646]599    set_namelist namelist_cfg ln_read_cfg .true.
600    set_namelist namelist_cfg ln_linssh .true.
[4147]601    set_namelist namelist_cfg jpni 4
[7646]602    set_namelist namelist_cfg jpnj 8
603    set_namelist namelist_cfg jpnij 32
[4147]604    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]605    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
606    # if not you need input files, and for tests is not necessary
[4147]607    set_namelist namelist_pisces_cfg ln_presatm .false.
608    set_namelist namelist_pisces_cfg ln_varpar .false.
609    set_namelist namelist_pisces_cfg ln_dust .false.
610    set_namelist namelist_pisces_cfg ln_solub .false.
611    set_namelist namelist_pisces_cfg ln_river .false.
612    set_namelist namelist_pisces_cfg ln_ndepo .false.
613    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]614    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]615    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]616    # put ln_pisdmp to false : no restoring to global mean value
[4147]617    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]618    if [ ${USING_MPMD} == "yes" ] ; then
619       set_xio_using_server iodef.xml true
620    else
621       set_xio_using_server iodef.xml false
622    fi
[3520]623    cd ${SETTE_DIR}
[7698]624    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]625    cd ${SETTE_DIR}
[3532]626    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]627
628    cd ${SETTE_DIR}
[7646]629    export TEST_NAME="REPRO_8_4"
[4252]630    . ./prepare_exe_dir.sh
[3680]631    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]632    NPROC=32
[4245]633    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]634    cd ${EXE_DIR}
[4147]635    set_namelist namelist_cfg nn_it000 1
636    set_namelist namelist_cfg nn_itend 40
637    set_namelist namelist_cfg ln_ctl .false.
638    set_namelist namelist_cfg ln_clobber .true.
[7646]639    set_namelist namelist_cfg ln_read_cfg .true.
640    set_namelist namelist_cfg ln_linssh .true.
641    set_namelist namelist_cfg jpni 8
642    set_namelist namelist_cfg jpnj 4
643    set_namelist namelist_cfg jpnij 32
[4147]644    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]645    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
646    # if not you need input files, and for tests is not necessary
[4147]647    set_namelist namelist_pisces_cfg ln_presatm .false.
648    set_namelist namelist_pisces_cfg ln_varpar .false.
649    set_namelist namelist_pisces_cfg ln_dust .false.
650    set_namelist namelist_pisces_cfg ln_solub .false.
651    set_namelist namelist_pisces_cfg ln_river .false.
652    set_namelist namelist_pisces_cfg ln_ndepo .false.
653    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]654    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]655    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]656    # put ln_pisdmp to false : no restoring to global mean value
[4147]657    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]658    if [ ${USING_MPMD} == "yes" ] ; then
659       set_xio_using_server iodef.xml true
660    else
661       set_xio_using_server iodef.xml false
662    fi
[3520]663    cd ${SETTE_DIR}
[7698]664    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]665    cd ${SETTE_DIR}
666    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
667fi
668
[3680]669# TESTS FOR AMM12 CONFIGURATION
[7715]670if [ ${config} -eq 7 ] ;  then
[3532]671    ## Restartability tests for AMM12
672    export TEST_NAME="LONG"
[7715]673    cd ${CONFIG_DIR0}
[4245]674    . ./makenemo -m ${CMP_NAM} -n AMM12_LONG -r AMM12 -j 8 add_key "key_tide" del_key ${DEL_KEYS}
[3520]675    cd ${SETTE_DIR}
[4252]676    . ./param.cfg
677    . ./all_functions.sh
678    . ./prepare_exe_dir.sh
[3520]679    JOB_FILE=${EXE_DIR}/run_job.sh
680    NPROC=32
[4245]681    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]682    cd ${EXE_DIR}
[4147]683    set_namelist namelist_cfg nn_it000 1
[4252]684    set_namelist namelist_cfg nn_itend 576
685    set_namelist namelist_cfg nn_stock 288
[4147]686    set_namelist namelist_cfg nn_fwb 0
687    set_namelist namelist_cfg ln_ctl .false.
688    set_namelist namelist_cfg ln_clobber .true.
[7646]689    set_namelist namelist_cfg ln_read_cfg .true.
690    set_namelist namelist_cfg ln_linssh .false.
691    set_namelist namelist_cfg jpni 4
692    set_namelist namelist_cfg jpnj 8
[4147]693    set_namelist namelist_cfg jpnij 32
[4245]694    if [ ${USING_MPMD} == "yes" ] ; then
695       set_xio_using_server iodef.xml true
696    else
697       set_xio_using_server iodef.xml false
698    fi
[3520]699    cd ${SETTE_DIR}
[7698]700    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]701
702    cd ${SETTE_DIR}
[3532]703    export TEST_NAME="SHORT"
[4379]704    . ./prepare_exe_dir.sh
[3520]705    cd ${EXE_DIR}
[4252]706    set_namelist namelist_cfg nn_it000 289
707    set_namelist namelist_cfg nn_itend 576
[4147]708    set_namelist namelist_cfg nn_fwb 0
709    set_namelist namelist_cfg ln_ctl .false.
710    set_namelist namelist_cfg ln_clobber .true.
[7646]711    set_namelist namelist_cfg ln_read_cfg .true.
712    set_namelist namelist_cfg ln_linssh .false.
713    set_namelist namelist_cfg jpni 4
714    set_namelist namelist_cfg jpnj 8
[4147]715    set_namelist namelist_cfg jpnij 32
716    set_namelist namelist_cfg ln_rstart .true.
717    set_namelist namelist_cfg nn_rstctl 2
[4252]718    set_namelist namelist_cfg cn_ocerst_in \"AMM12_00000288_restart_oce_out\"
719    set_namelist namelist_cfg nn_date0 20120102
[3537]720    for (( i=1; i<=$NPROC; i++)) ; do
721        L_NPROC=$(( $i - 1 ))
722        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[4252]723        ln -sf ../LONG/AMM12_00000288_restart_oce_out_${L_NPROC}.nc .
[3537]724    done
[4245]725    if [ ${USING_MPMD} == "yes" ] ; then
726       set_xio_using_server iodef.xml true
727    else
728       set_xio_using_server iodef.xml false
729    fi
[3520]730    cd ${SETTE_DIR}
[7698]731    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]732    cd ${SETTE_DIR}
[3532]733    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]734fi
735
[7715]736if [ ${config} -eq 8 ] ;  then
[3680]737## Reproducibility tests for AMM12
738    export TEST_NAME="REPRO_8_4"
[7715]739    cd ${CONFIG_DIR0}
[7646]740    . ./makenemo -m ${CMP_NAM} -n AMM12_32 -r AMM12 -j 8 del_key ${DEL_KEYS}
[3520]741    cd ${SETTE_DIR}
[4252]742    . ./param.cfg
743    . ./all_functions.sh
744    . ./prepare_exe_dir.sh
[3520]745    JOB_FILE=${EXE_DIR}/run_job.sh
746    NPROC=32
[4245]747    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]748    cd ${EXE_DIR}
[4147]749    set_namelist namelist_cfg nn_it000 1
750    set_namelist namelist_cfg nn_itend 576
751    set_namelist namelist_cfg nn_fwb 0
752    set_namelist namelist_cfg ln_ctl .false.
753    set_namelist namelist_cfg ln_clobber .true.
[7646]754    set_namelist namelist_cfg ln_read_cfg .true.
755    set_namelist namelist_cfg ln_linssh .false.
[4147]756    set_namelist namelist_cfg jpni 8
757    set_namelist namelist_cfg jpnj 4
758    set_namelist namelist_cfg jpnij 32
[4245]759    if [ ${USING_MPMD} == "yes" ] ; then
760       set_xio_using_server iodef.xml true
761    else
762       set_xio_using_server iodef.xml false
763    fi
[3520]764    cd ${SETTE_DIR}
[7698]765    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]766    cd ${SETTE_DIR}
767    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
768
769    cd ${SETTE_DIR}
[3680]770    export TEST_NAME="REPRO_4_8"
[4252]771    . ./prepare_exe_dir.sh
[5478]772    JOB_FILE=${EXE_DIR}/run_job.sh
773    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]774    cd ${EXE_DIR}
[4147]775    set_namelist namelist_cfg nn_it000 1
776    set_namelist namelist_cfg nn_itend 576
777    set_namelist namelist_cfg nn_fwb 0
778    set_namelist namelist_cfg ln_ctl .false.
779    set_namelist namelist_cfg ln_clobber .true.
[7646]780    set_namelist namelist_cfg ln_read_cfg .true.
781    set_namelist namelist_cfg ln_linssh .false.
[4147]782    set_namelist namelist_cfg jpni 4
783    set_namelist namelist_cfg jpnj 8
784    set_namelist namelist_cfg jpnij 32
[4245]785    if [ ${USING_MPMD} == "yes" ] ; then
786       set_xio_using_server iodef.xml true
787    else
788       set_xio_using_server iodef.xml false
789    fi
[3520]790    cd ${SETTE_DIR}
[7698]791    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[3520]792    cd ${SETTE_DIR}
[3532]793    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]794fi
795
796
[7646]797# TESTS FOR ORCA2_SAS_LIM3 CONFIGURATION
[7715]798if [ ${config} -eq 9 ] ;  then
[4147]799    ## Restartability tests for SAS
800    export TEST_NAME="LONG"
[7715]801    cd ${CONFIG_DIR0}
[7646]802    . ./makenemo -m ${CMP_NAM} -n SAS_LONG -r ORCA2_SAS_LIM3 -j 8 del_key ${DEL_KEYS}
[4147]803    cd ${SETTE_DIR}
[4252]804    . ./param.cfg
805    . ./all_functions.sh
806    . ./prepare_exe_dir.sh
[4147]807    JOB_FILE=${EXE_DIR}/run_job.sh
808    NPROC=32
[7646]809    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]810    cd ${EXE_DIR}
811    set_namelist namelist_cfg cn_exp \"SAS\"
812    set_namelist namelist_cfg nn_it000 1
813    set_namelist namelist_cfg nn_itend 100
814    set_namelist namelist_cfg nn_stock 50
815    set_namelist namelist_cfg ln_ctl .false.
816    set_namelist namelist_cfg ln_clobber .true.
[7646]817    set_namelist namelist_cfg ln_read_cfg .true.
818    set_namelist namelist_cfg ln_linssh .true.
[4316]819    set_namelist namelist_cfg nn_fwb 0
[7646]820    set_namelist namelist_cfg jpni 4
821    set_namelist namelist_cfg jpnj 8
[4147]822    set_namelist namelist_cfg jpnij 32
[4245]823    if [ ${USING_MPMD} == "yes" ] ; then
824       set_xio_using_server iodef.xml true
825    else
826       set_xio_using_server iodef.xml false
827    fi
[4147]828    cd ${SETTE_DIR}
[7698]829    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[4147]830
831    cd ${SETTE_DIR}
832    export TEST_NAME="SHORT"
[4252]833    . ./prepare_exe_dir.sh
[4147]834    cd ${EXE_DIR}
835    set_namelist namelist_cfg cn_exp \"SAS\"
836    set_namelist namelist_cfg nn_it000 51
837    set_namelist namelist_cfg nn_itend 100
838    set_namelist namelist_cfg ln_ctl .false.
839    set_namelist namelist_cfg ln_clobber .true.
[7646]840    set_namelist namelist_cfg ln_read_cfg .true.
841    set_namelist namelist_cfg ln_linssh .true.
[4316]842    set_namelist namelist_cfg nn_fwb 0
[7646]843    set_namelist namelist_cfg jpni 4
844    set_namelist namelist_cfg jpnj 8
[4147]845    set_namelist namelist_cfg jpnij 32
[7646]846    set_namelist namelist_cfg ln_rstart .true.
[4147]847    set_namelist namelist_cfg nn_rstctl 2
[7646]848    set_namelist namelist_ice_cfg cn_icerst_in \"SAS_00000050_restart_ice\"
[4245]849    if [ ${USING_MPMD} == "yes" ] ; then
850       set_xio_using_server iodef.xml true
851    else
852       set_xio_using_server iodef.xml false
853    fi
[7646]854    for (( i=1; i<=$NPROC; i++)) ; do
855        L_NPROC=$(( $i - 1 ))
856        L_NPROC=`printf "%04d\n" ${L_NPROC}`
857        ln -sf ../LONG/SAS_00000050_restart_ice_${L_NPROC}.nc .
858    done
[4147]859    cd ${SETTE_DIR}
[7698]860    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[4147]861    cd ${SETTE_DIR}
862    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
863fi
864
[7646]865# TESTS FOR ISOMIP CONFIGURATION
[7715]866if [ ${config} -eq 10 ] ;  then
[4990]867    ## Restartability tests for ISOMIP
868    export TEST_NAME="LONG"
[7715]869    cd ${CONFIG_DIR0}
870    . ./makenemo -m ${CMP_NAM} -n ISOMIP_LONG -r ISOMIP -a TEST_CASES -j 8 del_key ${DEL_KEYS}
[4990]871    cd ${SETTE_DIR}
872    . ./param.cfg
873    . ./all_functions.sh
874    . ./prepare_exe_dir.sh
875    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]876    NPROC=32
[4990]877    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
878    cd ${EXE_DIR}
879    set_namelist namelist_cfg cn_exp \"ISOMIP_LONG\"
880    set_namelist namelist_cfg nn_it000 1
881    set_namelist namelist_cfg nn_itend 96
882    set_namelist namelist_cfg nn_stock 48
883    set_namelist namelist_cfg ln_clobber .true.
[7715]884    set_namelist namelist_cfg ln_read_cfg .false.
[7646]885    set_namelist namelist_cfg jpni 4
886    set_namelist namelist_cfg jpnj 8
887    set_namelist namelist_cfg jpnij 32
[4990]888    if [ ${USING_MPMD} == "yes" ] ; then
889       set_xio_using_server iodef.xml true
890    else
891       set_xio_using_server iodef.xml false
892    fi
893    cd ${SETTE_DIR}
[7698]894    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[4147]895
[4990]896    cd ${SETTE_DIR}
897    export TEST_NAME="SHORT"
898    . ./prepare_exe_dir.sh
899    cd ${EXE_DIR}
900    set_namelist namelist_cfg cn_exp \"ISOMIP_SHORT\"
901    set_namelist namelist_cfg nn_it000 49
902    set_namelist namelist_cfg nn_itend 96
903    set_namelist namelist_cfg nn_stock 48
904    set_namelist namelist_cfg ln_rstart .true.
905    set_namelist namelist_cfg nn_rstctl 2
906    set_namelist namelist_cfg ln_clobber .true.
[7715]907    set_namelist namelist_cfg ln_read_cfg .false.
[7646]908    set_namelist namelist_cfg jpni 4
909    set_namelist namelist_cfg jpnj 8
910    set_namelist namelist_cfg jpnij 32
[4990]911    set_namelist namelist_cfg cn_ocerst_in \"ISOMIP_LONG_00000048_restart\"
912    if [ ${USING_MPMD} == "yes" ] ; then
913       set_xio_using_server iodef.xml true
914    else
915       set_xio_using_server iodef.xml false
916    fi
917    for (( i=1; i<=$NPROC; i++)) ; do
918        L_NPROC=$(( $i - 1 ))
919        L_NPROC=`printf "%04d\n" ${L_NPROC}`
920        ln -sf ../LONG/ISOMIP_LONG_00000048_restart_${L_NPROC}.nc .
921    done
922    if [ ${USING_MPMD} == "yes" ] ; then
923       set_xio_using_server iodef.xml true
924    else
925       set_xio_using_server iodef.xml false
926    fi
927    cd ${SETTE_DIR}
[7698]928    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[4990]929    cd ${SETTE_DIR}
930    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
931fi
[7715]932if [ ${config} -eq 11 ] ;  then
[4990]933    ## Reproducibility tests for ISOMIP
[7646]934    export TEST_NAME="REPRO_4_8"
[7715]935    cd ${CONFIG_DIR0}
936    . ./makenemo -m ${CMP_NAM} -n ISOMIP_32 -r ISOMIP -a TEST_CASES -j 8 del_key ${DEL_KEYS}
[4990]937    cd ${SETTE_DIR}
938    . ./param.cfg
939    . ./all_functions.sh
940    . ./prepare_exe_dir.sh
941    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]942    NPROC=32
[4990]943    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
944    cd ${EXE_DIR}
945    set_namelist namelist_cfg cn_exp \"ISOMIP_14\"
946    set_namelist namelist_cfg nn_it000 1
947    set_namelist namelist_cfg nn_itend 48
948    set_namelist namelist_cfg ln_ctl .false.
949    set_namelist namelist_cfg ln_clobber .true.
[7715]950    set_namelist namelist_cfg ln_read_cfg .false.
[7646]951    set_namelist namelist_cfg jpni 4
952    set_namelist namelist_cfg jpnj 8
953    set_namelist namelist_cfg jpnij 32
[4990]954    if [ ${USING_MPMD} == "yes" ] ; then
955       set_xio_using_server iodef.xml true
956    else
957       set_xio_using_server iodef.xml false
958    fi
959    cd ${SETTE_DIR}
[7698]960    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[4990]961    cd ${SETTE_DIR}
962    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
963
964    cd ${SETTE_DIR}
[7646]965    export TEST_NAME="REPRO_8_4"
[4990]966    . ./prepare_exe_dir.sh
967    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]968    NPROC=32
[4990]969    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
970    cd ${EXE_DIR}
971    set_namelist namelist_cfg cn_exp \"ISOMIP_22\"
972    set_namelist namelist_cfg nn_it000 1
973    set_namelist namelist_cfg nn_itend 48
974    set_namelist namelist_cfg ln_ctl .false.
975    set_namelist namelist_cfg ln_clobber .true.
[7715]976    set_namelist namelist_cfg ln_read_cfg .false.
[7646]977    set_namelist namelist_cfg jpni 8
978    set_namelist namelist_cfg jpnj 4
979    set_namelist namelist_cfg jpnij 32
[4990]980    if [ ${USING_MPMD} == "yes" ] ; then
981       set_xio_using_server iodef.xml true
982    else
983       set_xio_using_server iodef.xml false
984    fi
985    cd ${SETTE_DIR}
[7698]986    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[4990]987    cd ${SETTE_DIR}
988    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
989
990fi
991
992## Test assimilation interface code, OBS and ASM for reproducibility
993## Restartability not tested (ASM code not restartable while increments are being applied)
[7715]994if [ ${config} -eq 12 ] ; then
995   ## Reproducibility tests for ORCA2_LIM3_OBS
[7646]996    export TEST_NAME="REPRO_4_8"
[7715]997    cd ${CONFIG_DIR0}
[7722]998    . ./makenemo -m ${CMP_NAM} -n ORCA2_LIM3_OBS -r ORCA2_LIM3_PISCES -j 8 add_key "key_asminc"
[4990]999    cd ${SETTE_DIR}
1000    . ./param.cfg
1001    . ./all_functions.sh
1002    . ./prepare_exe_dir.sh
1003    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]1004    NPROC=32
[4990]1005    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1006    cd ${EXE_DIR}
1007    set_namelist namelist_cfg nn_it000 1
1008    set_namelist namelist_cfg nn_itend 75
1009    set_namelist namelist_cfg nn_fwb 0
1010    set_namelist namelist_cfg ln_ctl .false.
1011    set_namelist namelist_cfg ln_clobber .true.
[7646]1012    set_namelist namelist_cfg ln_read_cfg .true.
1013    set_namelist namelist_cfg ln_linssh .false.
[7722]1014    set_namelist namelist_cfg ln_icebergs .false.
[4990]1015    set_namelist namelist_cfg jpni 4
[7646]1016    set_namelist namelist_cfg jpnj 8
1017    set_namelist namelist_cfg jpnij 32
[6140]1018    set_namelist namelist_cfg ln_diaobs .true.
[4990]1019    set_namelist namelist_cfg ln_t3d .true.
1020    set_namelist namelist_cfg ln_s3d .true.
1021    set_namelist namelist_cfg ln_sst .true.
1022    set_namelist namelist_cfg ln_sla .true.
[6140]1023    set_namelist namelist_cfg ln_sic .true.
1024    set_namelist namelist_cfg ln_vel3d .true.
[4990]1025    set_namelist namelist_cfg ln_bkgwri .true.
1026    set_namelist namelist_cfg ln_trainc .true.
1027    set_namelist namelist_cfg ln_dyninc .true.
1028    set_namelist namelist_cfg ln_sshinc .true.
1029    set_namelist namelist_cfg ln_asmiau .true.
[7722]1030    #remove all useless options for pisces (due to ORCA2_LIM3_PISCES reference configuration)
1031    set_namelist namelist_top_cfg ln_trcdta .false.
1032    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
1033    # if not you need input files, and for tests is not necessary
1034    set_namelist namelist_pisces_cfg ln_presatm .false.
1035    set_namelist namelist_pisces_cfg ln_varpar .false.
1036    set_namelist namelist_pisces_cfg ln_dust .false.
1037    set_namelist namelist_pisces_cfg ln_solub .false.
1038    set_namelist namelist_pisces_cfg ln_river .false.
1039    set_namelist namelist_pisces_cfg ln_ndepo .false.
1040    set_namelist namelist_pisces_cfg ln_ironsed .false.
1041    set_namelist namelist_pisces_cfg ln_ironice .false.
1042    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4990]1043    if [ ${USING_MPMD} == "yes" ] ; then
1044       set_xio_using_server iodef.xml true
1045    else
1046       set_xio_using_server iodef.xml false
1047    fi
1048    cd ${SETTE_DIR}
[7698]1049    . ./prepare_job.sh input_ORCA2_LIM3_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[4990]1050    cd ${SETTE_DIR}
1051    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1052
1053   cd ${SETTE_DIR}
[7646]1054    export TEST_NAME="REPRO_8_4"
[4990]1055    . ./prepare_exe_dir.sh
1056    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]1057    NPROC=32
[4990]1058    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1059    cd ${EXE_DIR}
1060    set_namelist namelist_cfg nn_it000 1
1061    set_namelist namelist_cfg nn_itend 75
1062    set_namelist namelist_cfg nn_fwb 0
1063    set_namelist namelist_cfg ln_ctl .false.
1064    set_namelist namelist_cfg ln_clobber .true.
[7646]1065    set_namelist namelist_cfg ln_read_cfg .true.
1066    set_namelist namelist_cfg ln_linssh .false.
[7722]1067    set_namelist namelist_cfg ln_icebergs .false.
[7646]1068    set_namelist namelist_cfg jpni 8
1069    set_namelist namelist_cfg jpnj 4
1070    set_namelist namelist_cfg jpnij 32
[6140]1071    set_namelist namelist_cfg ln_diaobs .true.
[4990]1072    set_namelist namelist_cfg ln_t3d .true.
1073    set_namelist namelist_cfg ln_s3d .true.
1074    set_namelist namelist_cfg ln_sst .true.
1075    set_namelist namelist_cfg ln_sla .true.
[6140]1076    set_namelist namelist_cfg ln_sic .true.
1077    set_namelist namelist_cfg ln_vel3d .true.
[4990]1078    set_namelist namelist_cfg ln_bkgwri .true.
1079    set_namelist namelist_cfg ln_trainc .true.
1080    set_namelist namelist_cfg ln_dyninc .true.
1081    set_namelist namelist_cfg ln_sshinc .true.
1082    set_namelist namelist_cfg ln_asmiau .true.
[7722]1083    #remove all useless options for pisces (due to ORCA2_LIM3_PISCES reference configuration)
1084    set_namelist namelist_top_cfg ln_trcdta .false.
1085    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
1086    # if not you need input files, and for tests is not necessary
1087    set_namelist namelist_pisces_cfg ln_presatm .false.
1088    set_namelist namelist_pisces_cfg ln_varpar .false.
1089    set_namelist namelist_pisces_cfg ln_dust .false.
1090    set_namelist namelist_pisces_cfg ln_solub .false.
1091    set_namelist namelist_pisces_cfg ln_river .false.
1092    set_namelist namelist_pisces_cfg ln_ndepo .false.
1093    set_namelist namelist_pisces_cfg ln_ironsed .false.
1094    set_namelist namelist_pisces_cfg ln_ironice .false.
1095    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4990]1096    if [ ${USING_MPMD} == "yes" ] ; then
1097       set_xio_using_server iodef.xml true
1098    else
1099       set_xio_using_server iodef.xml false
1100    fi
1101    cd ${SETTE_DIR}
[7698]1102    . ./prepare_job.sh input_ORCA2_LIM3_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[4990]1103    cd ${SETTE_DIR}
1104    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1105fi
[7715]1106# TEST FOR ORCA2_LIM3_AGRIF : simple test of running AGRIF (no restartability neither reproducibility tests)
1107if [ ${config} -eq 13 ] ;  then
1108    ## ORCA2_LIM3 with Agulhas AGRIF zoom in MPI
[4245]1109    export TEST_NAME="SHORT"
[7715]1110    cd ${CONFIG_DIR0}
[7722]1111    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_1_2 -r ORCA2_LIM3_PISCES -j 8 add_key "key_agrif" del_key "key_zdftmx"
[4245]1112    cd ${SETTE_DIR}
[4252]1113    . ./param.cfg
1114    . ./all_functions.sh
1115    . ./prepare_exe_dir.sh
[4245]1116    JOB_FILE=${EXE_DIR}/run_job.sh
1117    NPROC=2
1118    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1119    cd ${EXE_DIR}
1120    set_namelist namelist_cfg nn_it000 1
1121    set_namelist namelist_cfg nn_itend 75
1122    set_namelist namelist_cfg ln_ctl .false.
1123    set_namelist namelist_cfg ln_clobber .true.
[7646]1124    set_namelist namelist_cfg ln_read_cfg .true.
1125    set_namelist namelist_cfg ln_linssh .true.
1126    set_namelist namelist_cfg ln_hpg_sco .false.
1127    set_namelist namelist_cfg ln_hpg_zps .true.
[4316]1128    set_namelist namelist_cfg nn_fwb 0
[4245]1129    set_namelist namelist_cfg jpni 1
1130    set_namelist namelist_cfg jpnj 2
1131    set_namelist namelist_cfg jpnij 2
1132    set_namelist 1_namelist_cfg nn_it000 1
1133    set_namelist 1_namelist_cfg nn_itend 150
1134    set_namelist 1_namelist_cfg ln_ctl .false.
1135    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1136    set_namelist 1_namelist_cfg ln_read_cfg .true.
1137    set_namelist 1_namelist_cfg ln_linssh .true.
1138    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1139    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[4245]1140    if [ ${USING_MPMD} == "yes" ] ; then
1141       set_xio_using_server iodef.xml true
1142    else
1143       set_xio_using_server iodef.xml false
1144    fi
1145    cd ${SETTE_DIR}
[7715]1146    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[4245]1147    cd ${SETTE_DIR}
1148    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1149fi
1150
[5589]1151# test code corruption with AGRIF
[7715]1152# Compile and run with or without AGRIF ORCA2_LIM3
1153if [ ${config} -eq 14 ] ;  then
[7646]1154    # First run same as 15 but without zoom
[5589]1155    export TEST_NAME="SHORT_NOZOOM"
[7715]1156    cd ${CONFIG_DIR0}
[7722]1157    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_2_2 -r ORCA2_LIM3_PISCES -j 8 add_key "key_agrif" del_key "key_zdftmx"
[5589]1158    cd ${SETTE_DIR}
1159    . ./param.cfg
1160    . ./all_functions.sh
1161    . ./prepare_exe_dir.sh
1162    JOB_FILE=${EXE_DIR}/run_job.sh
1163    NPROC=4
1164    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1165    cd ${EXE_DIR}
1166    set_namelist namelist_cfg nn_it000 1
1167    set_namelist namelist_cfg nn_itend 75
1168    set_namelist namelist_cfg ln_ctl .false.
1169    set_namelist namelist_cfg ln_clobber .true.
[7646]1170    set_namelist namelist_cfg ln_read_cfg .true.
1171    set_namelist namelist_cfg ln_linssh .true.
1172    set_namelist namelist_cfg ln_hpg_sco .false.
1173    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1174    set_namelist namelist_cfg nn_fwb 0
1175    set_namelist namelist_cfg jpni 2
1176    set_namelist namelist_cfg jpnj 2
1177    set_namelist namelist_cfg jpnij 4
1178#
1179#   Set the number of fine grids to zero:   
1180    sed -i "1s/.*/0/" ${EXE_DIR}/AGRIF_FixedGrids.in
1181
1182    if [ ${USING_MPMD} == "yes" ] ; then
1183       set_xio_using_server iodef.xml true
1184    else
1185       set_xio_using_server iodef.xml false
1186    fi
1187    cd ${SETTE_DIR}
[7715]1188    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[5589]1189    cd ${SETTE_DIR}
1190    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1191
1192    export TEST_NAME="SHORT_NOAGRIF"
[7715]1193    cd ${CONFIG_DIR0}
[7722]1194    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_2_2_NAG -r ORCA2_LIM3_PISCES -j 8 del_key "key_zdftmx"
[5589]1195    cd ${SETTE_DIR}
1196    . ./param.cfg
1197    . ./all_functions.sh
1198    . ./prepare_exe_dir.sh
1199    JOB_FILE=${EXE_DIR}/run_job.sh
1200    NPROC=4
1201    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1202    cd ${EXE_DIR}
1203    set_namelist namelist_cfg nn_it000 1
1204    set_namelist namelist_cfg nn_itend 75
1205    set_namelist namelist_cfg ln_ctl .false.
1206    set_namelist namelist_cfg ln_clobber .true.
[7646]1207    set_namelist namelist_cfg ln_read_cfg .true.
1208    set_namelist namelist_cfg ln_linssh .true.
1209    set_namelist namelist_cfg ln_hpg_sco .false.
1210    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1211    set_namelist namelist_cfg nn_fwb 0
1212    set_namelist namelist_cfg jpni 2
1213    set_namelist namelist_cfg jpnj 2
1214    set_namelist namelist_cfg jpnij 4
1215#
1216    if [ ${USING_MPMD} == "yes" ] ; then
1217       set_xio_using_server iodef.xml true
1218    else
1219       set_xio_using_server iodef.xml false
1220    fi
1221    cd ${SETTE_DIR}
[7715]1222    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[5589]1223    cd ${SETTE_DIR}
1224    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1225
1226fi
1227
[7715]1228## Restartability tests for ORCA2_LIM3_AGRIF
1229if [ ${config} -eq 15 ] ;  then
[5589]1230    export TEST_NAME="LONG"
[7715]1231    cd ${CONFIG_DIR0}
[7722]1232    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_LONG -r ORCA2_LIM3_PISCES -j 8 add_key "key_agrif" del_key "key_zdftmx"
[5589]1233    cd ${SETTE_DIR}
1234    . ./param.cfg
1235    . ./all_functions.sh
1236    . ./prepare_exe_dir.sh
1237    JOB_FILE=${EXE_DIR}/run_job.sh
1238    NPROC=4
1239    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1240    cd ${EXE_DIR}
1241    set_namelist namelist_cfg cn_exp \"O2LP_LONG\"
1242    set_namelist namelist_cfg nn_it000 1
1243    set_namelist namelist_cfg nn_itend 150
1244    set_namelist namelist_cfg nn_stock 75
1245    set_namelist namelist_cfg ln_clobber .true.
[7646]1246    set_namelist namelist_cfg ln_read_cfg .true.
1247    set_namelist namelist_cfg ln_linssh .true.
1248    set_namelist namelist_cfg ln_hpg_sco .false.
1249    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1250    set_namelist namelist_cfg nn_fwb 0
1251    set_namelist namelist_cfg jpni 2
1252    set_namelist namelist_cfg jpnj 2
1253    set_namelist namelist_cfg jpnij 4
1254    set_namelist 1_namelist_cfg cn_exp \"O2LP_LONG\"
1255    set_namelist 1_namelist_cfg nn_it000 1
1256    set_namelist 1_namelist_cfg nn_itend 300
1257    set_namelist 1_namelist_cfg nn_stock 150
1258    set_namelist 1_namelist_cfg ln_ctl .false.
1259    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1260    set_namelist 1_namelist_cfg ln_read_cfg .true.
1261    set_namelist 1_namelist_cfg ln_linssh .true.
1262    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1263    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1264#
1265    if [ ${USING_MPMD} == "yes" ] ; then
1266       set_xio_using_server iodef.xml true
1267    else
1268       set_xio_using_server iodef.xml false
1269    fi
1270    cd ${SETTE_DIR}
[7715]1271    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[5589]1272   
1273    cd ${SETTE_DIR}
1274    export TEST_NAME="SHORT"
1275    . ./prepare_exe_dir.sh
1276    cd ${EXE_DIR}
1277    set_namelist namelist_cfg cn_exp \"O2LP_SHORT\"
1278    set_namelist namelist_cfg nn_it000 76
1279    set_namelist namelist_cfg nn_itend 150
1280    set_namelist namelist_cfg nn_stock 75
1281    set_namelist namelist_cfg ln_rstart .true.
1282    set_namelist namelist_cfg nn_rstctl 2
1283    set_namelist namelist_cfg ln_clobber .true.
[7646]1284    set_namelist namelist_cfg ln_read_cfg .true.
1285    set_namelist namelist_cfg ln_linssh .true.
1286    set_namelist namelist_cfg ln_hpg_sco .false.
1287    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1288    set_namelist namelist_cfg nn_fwb 0
1289    set_namelist namelist_cfg jpni 2
1290    set_namelist namelist_cfg jpnj 2
1291    set_namelist namelist_cfg jpnij 4
1292    set_namelist 1_namelist_cfg cn_exp \"O2LP_SHORT\"
1293    set_namelist 1_namelist_cfg nn_it000 151
1294    set_namelist 1_namelist_cfg nn_itend 300
1295    set_namelist 1_namelist_cfg nn_stock 150
1296    set_namelist 1_namelist_cfg ln_rstart .true.
1297    set_namelist 1_namelist_cfg nn_rstctl 2
1298    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1299    set_namelist 1_namelist_cfg ln_read_cfg .true.
1300    set_namelist 1_namelist_cfg ln_linssh .true.
1301    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1302    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1303    set_namelist namelist_cfg cn_ocerst_in \"O2LP_LONG_00000075_restart\"
1304    set_namelist namelist_ice_cfg cn_icerst_in \"O2LP_LONG_00000075_restart_ice\"
1305    set_namelist 1_namelist_cfg cn_ocerst_in \"O2LP_LONG_00000150_restart\"
1306
1307    for (( i=1; i<=$NPROC; i++)) ; do
1308        L_NPROC=$(( $i - 1 ))
1309        L_NPROC=`printf "%04d\n" ${L_NPROC}`
1310        ln -sf ../LONG/O2LP_LONG_00000075_restart_${L_NPROC}.nc .
1311        ln -sf ../LONG/O2LP_LONG_00000075_restart_ice_${L_NPROC}.nc .
1312        ln -sf ../LONG/1_O2LP_LONG_00000150_restart_${L_NPROC}.nc .
1313    done
1314    if [ ${USING_MPMD} == "yes" ] ; then
1315       set_xio_using_server iodef.xml true
1316    else
1317       set_xio_using_server iodef.xml false
1318    fi
1319    cd ${SETTE_DIR}
[7715]1320    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[5589]1321    cd ${SETTE_DIR}
1322    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1323fi
1324
[7715]1325## Reproducibility tests for ORCA2_LIM3_AGRIF
1326if [ ${config} -eq 16 ] ;  then
[5589]1327    export TEST_NAME="REPRO_4_4"
[7715]1328    cd ${CONFIG_DIR0}
[7722]1329    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_16 -r ORCA2_LIM3_PISCES -j 8 add_key "key_agrif" del_key "key_zdftmx"
[5589]1330    cd ${SETTE_DIR}
1331    . ./param.cfg
1332    . ./all_functions.sh
1333    . ./prepare_exe_dir.sh
1334    JOB_FILE=${EXE_DIR}/run_job.sh
1335    NPROC=16
1336    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1337    cd ${EXE_DIR}
1338    set_namelist namelist_cfg nn_it000 1
1339    set_namelist namelist_cfg nn_itend 75
1340    set_namelist namelist_cfg ln_ctl .false.
1341    set_namelist namelist_cfg ln_clobber .true.
[7646]1342    set_namelist namelist_cfg ln_read_cfg .true.
1343    set_namelist namelist_cfg ln_linssh .true.
1344    set_namelist namelist_cfg ln_hpg_sco .false.
1345    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1346    set_namelist namelist_cfg nn_fwb 0
1347    set_namelist namelist_cfg jpni 4
1348    set_namelist namelist_cfg jpnj 4
1349    set_namelist namelist_cfg jpnij 16
1350    set_namelist 1_namelist_cfg nn_it000 1
1351    set_namelist 1_namelist_cfg nn_itend 150
1352    set_namelist 1_namelist_cfg ln_ctl .false.
1353    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1354    set_namelist 1_namelist_cfg ln_read_cfg .true.
1355    set_namelist 1_namelist_cfg ln_linssh .true.
1356    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1357    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1358
1359    if [ ${USING_MPMD} == "yes" ] ; then
1360       set_xio_using_server iodef.xml true
1361    else
1362       set_xio_using_server iodef.xml false
1363    fi
1364    cd ${SETTE_DIR}
[7715]1365    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[5589]1366    cd ${SETTE_DIR}
1367    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1368
1369    cd ${SETTE_DIR}
1370    export TEST_NAME="REPRO_2_8"
1371    . ./prepare_exe_dir.sh
1372    JOB_FILE=${EXE_DIR}/run_job.sh
1373    NPROC=16
1374    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1375    cd ${EXE_DIR}
1376    set_namelist namelist_cfg nn_it000 1
1377    set_namelist namelist_cfg nn_itend 75
1378    set_namelist namelist_cfg ln_ctl .false.
1379    set_namelist namelist_cfg ln_clobber .true.
[7646]1380    set_namelist namelist_cfg ln_read_cfg .true.
1381    set_namelist namelist_cfg ln_linssh .true.
1382    set_namelist namelist_cfg ln_hpg_sco .false.
1383    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1384    set_namelist namelist_cfg nn_fwb 0
1385    set_namelist namelist_cfg jpni 2
1386    set_namelist namelist_cfg jpnj 8
1387    set_namelist namelist_cfg jpnij 16
1388    set_namelist 1_namelist_cfg nn_it000 1
1389    set_namelist 1_namelist_cfg nn_itend 150
1390    set_namelist 1_namelist_cfg ln_ctl .false.
1391    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1392    set_namelist 1_namelist_cfg ln_read_cfg .true.
1393    set_namelist 1_namelist_cfg ln_linssh .true.
1394    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1395    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1396
1397    if [ ${USING_MPMD} == "yes" ] ; then
1398       set_xio_using_server iodef.xml true
1399    else
1400       set_xio_using_server iodef.xml false
1401    fi
1402    cd ${SETTE_DIR}
[7715]1403    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${OMP_NTHR}
[5589]1404    cd ${SETTE_DIR}
1405    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1406fi
1407
[3520]1408done
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