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namelist_cfg in trunk/NEMOGCM/TRUST/inputs/GYRE – NEMO

source: trunk/NEMOGCM/TRUST/inputs/GYRE/namelist_cfg @ 7646

Last change on this file since 7646 was 7646, checked in by timgraham, 7 years ago

Merge of dev_merge_2016 into trunk. UPDATE TO ARCHFILES NEEDED for XIOS2.
LIM_SRC_s/limrhg.F90 to follow in next commit due to change of kind (I'm unable to do it in this commit).
Merged using the following steps:

1) svn merge --reintegrate svn+ssh://forge.ipsl.jussieu.fr/ipsl/forge/projets/nemo/svn/trunk .
2) Resolve minor conflicts in sette.sh and namelist_cfg for ORCA2LIM3 (due to a change in trunk after branch was created)
3) svn commit
4) svn switch svn+ssh://forge.ipsl.jussieu.fr/ipsl/forge/projets/nemo/svn/trunk
5) svn merge svn+ssh://forge.ipsl.jussieu.fr/ipsl/forge/projets/nemo/svn/branches/2016/dev_merge_2016 .
6) At this stage I checked out a clean copy of the branch to compare against what is about to be committed to the trunk.
6) svn commit #Commit code to the trunk

In this commit I have also reverted a change to Fcheck_archfile.sh which was causing problems on the Paris machine.

File size: 22.1 KB
Line 
1!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
2!! NEMO/OPA  : GYRE_PISCES Configuration namelist to overwrite reference dynamical namelist
3!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
4!-----------------------------------------------------------------------
5&namrun        !   parameters of the run
6!-----------------------------------------------------------------------
7   cn_exp      =  'GYRE_trust'       !  experience name
8   nn_it000    =       1          !  first time step
9   nn_itend    =     120          !  last  time step
10   nn_stock    =      60          !  frequency of creation of a restart file (modulo referenced to 1)
11/
12!-----------------------------------------------------------------------
13&namcfg     !   parameters of the configuration   
14!-----------------------------------------------------------------------
15   cp_cfg      =  "gyre"                 !  name of the configuration
16   jp_cfg      =       1                 !  resolution of the configuration
17   jpidta      =      32                 !  1st lateral dimension ( >= jpi ) = 30*jp_cfg+2
18   jpjdta      =      22                 !  2nd    "         "    ( >= jpj ) = 20*jp_cfg+2
19   jpkdta      =      31                 !  number of levels      ( >= jpk )
20   jpiglo      =      32                 !  1st dimension of global domain --> i  = jpidta
21   jpjglo      =      22                 !  2nd    -                  -    --> j  = jpjdta
22   jpizoom     =       1                 !  left bottom (i,j) indices of the zoom
23   jpjzoom     =       1                 !  in data domain indices
24   jperio      =       0                 !  lateral cond. type (between 0 and 6)
25/
26!-----------------------------------------------------------------------
27&namzgr        !   vertical coordinate
28!-----------------------------------------------------------------------
29   ln_zco      = .true.    !  z-coordinate - full    steps   (T/F)      ("key_zco" may also be defined)
30   ln_zps      = .false.   !  z-coordinate - partial steps   (T/F)
31/
32!-----------------------------------------------------------------------
33&namzgr_sco    !   s-coordinate or hybrid z-s-coordinate
34!-----------------------------------------------------------------------
35/
36!-----------------------------------------------------------------------
37&namdom        !   space and time domain (bathymetry, mesh, timestep)
38!-----------------------------------------------------------------------
39   nn_bathy    =    0      !  compute (=0) or read (=1) the bathymetry file
40   rn_rdt      = 7200.     !  time step for the dynamics (and tracer if nn_acc=0)
41   rn_rdtmin   = 7200.           !  minimum time step on tracers (used if nn_acc=1)
42   rn_rdtmax   = 7200.           !  maximum time step on tracers (used if nn_acc=1)
43   jphgr_msh   =       5                 !  type of horizontal mesh
44   ppglam0     =       0.0               !  longitude of first raw and column T-point (jphgr_msh = 1)
45   ppgphi0     =      29.0               ! latitude  of first raw and column T-point (jphgr_msh = 1)
46   ppe1_deg    =  999999.0               !  zonal      grid-spacing (degrees)
47   ppe2_deg    =  999999.0               !  meridional grid-spacing (degrees)
48   ppe1_m      =  999999.0               !  zonal      grid-spacing (degrees)
49   ppe2_m      =  999999.0               !  meridional grid-spacing (degrees)
50   ppsur       =   -2033.194295283385    !  ORCA r4, r2 and r05 coefficients
51   ppa0        =     155.8325369664153   ! (default coefficients)
52   ppa1        =     146.3615918601890   !
53   ppkth       =      17.28520372419791  !
54   ppacr       =       5.0               !
55   ppdzmin     =  999999.0               !  Minimum vertical spacing
56   pphmax      =  999999.0               !  Maximum depth
57   ldbletanh   =  .FALSE.                !  Use/do not use double tanf function for vertical coordinates
58   ppa2        =  999999.0               !  Double tanh function parameters
59   ppkth2      =  999999.0               !
60   ppacr2      =  999999.0               !
61/
62!-----------------------------------------------------------------------
63&namsplit      !   time splitting parameters                            ("key_dynspg_ts")
64!-----------------------------------------------------------------------
65/
66!-----------------------------------------------------------------------
67&namcrs        !   Grid coarsening for dynamics output and/or
68               !   passive tracer coarsened online simulations
69!-----------------------------------------------------------------------
70/
71!-----------------------------------------------------------------------
72&namtsd    !   data : Temperature  & Salinity
73!-----------------------------------------------------------------------
74   cn_dir        = './'      !  root directory for the location of the runoff files
75   ln_tsd_init   = .false.   !  Initialisation of ocean T & S with T &S input data (T) or not (F)
76   ln_tsd_tradmp = .false.   !  damping of ocean T & S toward T &S input data (T) or not (F)
77/
78!-----------------------------------------------------------------------
79&namsbc        !   Surface Boundary Condition (surface module)
80!-----------------------------------------------------------------------
81   nn_fsbc     = 1         !  frequency of surface boundary condition computation
82   !                       !     (also = the frequency of sea-ice model call)
83   ln_ana      = .true.    !  analytical formulation                    (T => fill namsbc_ana )
84   ln_blk_core = .false.   !  CORE bulk formulation                     (T => fill namsbc_core)
85   nn_ice      = 0         !  =0 no ice boundary condition   ,
86   ln_rnf      = .false.   !  runoffs                                   (T => fill namsbc_rnf)
87   ln_ssr      = .false.   !  Sea Surface Restoring on T and/or S       (T => fill namsbc_ssr)
88   nn_fwb      = 0         !  FreshWater Budget: =0 unchecked
89/
90!-----------------------------------------------------------------------
91&namsbc_ana    !   analytical surface boundary condition
92!-----------------------------------------------------------------------
93   nn_tau000   =   100     !  gently increase the stress over the first ntau_rst time-steps
94   rn_utau0    =   0.1e0   !  uniform value for the i-stress
95/
96!-----------------------------------------------------------------------
97&namsbc_flx    !   surface boundary condition : flux formulation
98!-----------------------------------------------------------------------
99/
100!-----------------------------------------------------------------------
101&namsbc_clio   !   namsbc_clio  CLIO bulk formulae
102!-----------------------------------------------------------------------
103/
104!-----------------------------------------------------------------------
105&namsbc_core   !   namsbc_core  CORE bulk formulae
106!-----------------------------------------------------------------------
107/
108!-----------------------------------------------------------------------
109&namsbc_mfs   !   namsbc_mfs  MFS bulk formulae
110!-----------------------------------------------------------------------
111/
112!-----------------------------------------------------------------------
113&namsbc_cpl    !   coupled ocean/atmosphere model                       ("key_oasis3")
114!-----------------------------------------------------------------------
115/
116!-----------------------------------------------------------------------
117&namtra_qsr    !   penetrative solar radiation
118!-----------------------------------------------------------------------
119   ln_qsr_rgb  = .false.   !  RGB (Red-Green-Blue) light penetration
120   ln_qsr_2bd  = .true.    !  2 bands              light penetration
121   nn_chldta   =      0    !  RGB : Chl data (=1) or cst value (=0)
122/
123!-----------------------------------------------------------------------
124&namsbc_rnf    !   runoffs namelist surface boundary condition
125!-----------------------------------------------------------------------
126   ln_rnf_mouth = .false.   !  specific treatment at rivers mouths
127/
128!-----------------------------------------------------------------------
129&namsbc_apr    !   Atmospheric pressure used as ocean forcing or in bulk
130!-----------------------------------------------------------------------
131/
132!-----------------------------------------------------------------------
133&namsbc_ssr    !   surface boundary condition : sea surface restoring
134!-----------------------------------------------------------------------
135   nn_sssr     =     0     !  add a damping     term in the surface freshwater flux (=2)
136   rn_deds     =   -27.7   !  magnitude of the damping on salinity   [mm/day]
137   ln_sssr_bnd =   .false. !  flag to bound erp term (associated with nn_sssr=2)
138/
139!-----------------------------------------------------------------------
140&namsbc_alb    !   albedo parameters
141!-----------------------------------------------------------------------
142/
143!-----------------------------------------------------------------------
144&namberg       !   iceberg parameters
145!-----------------------------------------------------------------------
146/
147!-----------------------------------------------------------------------
148&namlbc        !   lateral momentum boundary condition
149!-----------------------------------------------------------------------
150   rn_shlat    =    0.     !  shlat = 0  !  0 < shlat < 2  !  shlat = 2  !  2 < shlat
151/
152!-----------------------------------------------------------------------
153&namcla        !   cross land advection
154!-----------------------------------------------------------------------
155/
156!-----------------------------------------------------------------------
157&namobc        !   open boundaries parameters                           ("key_obc")
158!-----------------------------------------------------------------------
159/
160!-----------------------------------------------------------------------
161&namagrif      !  AGRIF zoom                                            ("key_agrif")
162!-----------------------------------------------------------------------
163/
164!-----------------------------------------------------------------------
165&nam_tide      !    tide parameters
166!-----------------------------------------------------------------------
167/
168!-----------------------------------------------------------------------
169&nambdy        !  unstructured open boundaries
170!-----------------------------------------------------------------------
171/
172!-----------------------------------------------------------------------
173&nambdy_dta      !  open boundaries - external data
174!-----------------------------------------------------------------------
175/
176!-----------------------------------------------------------------------
177&nambdy_tide     ! tidal forcing at open boundaries
178!-----------------------------------------------------------------------
179/
180!-----------------------------------------------------------------------
181&nambfr        !   bottom friction
182!-----------------------------------------------------------------------
183   nn_bfr      =    2      !  type of bottom friction :   = 0 : free slip,  = 1 : linear friction
184/
185!-----------------------------------------------------------------------
186&nambbc        !   bottom temperature boundary condition
187!-----------------------------------------------------------------------
188   ln_trabbc   = .false.   !  Apply a geothermal heating at the ocean bottom
189   nn_geoflx   =    0      !  geothermal heat flux: = 0 no flux
190/
191!-----------------------------------------------------------------------
192&nambbl        !   bottom boundary layer scheme
193!-----------------------------------------------------------------------
194/
195!-----------------------------------------------------------------------
196&nameos        !   ocean physical parameters
197!-----------------------------------------------------------------------
198   nn_eos      =  0       !  type of equation of state and Brunt-Vaisala frequency
199                                 !  =-1, TEOS-10
200                                 !  = 0, EOS-80
201                                 !  = 1, S-EOS   (simplified eos)
202   ln_useCT    = .false.  ! use of Conservative Temp. ==> surface CT converted in Pot. Temp. in sbcssm
203   !                             !
204   !                      ! S-EOS coefficients :
205   !                             !  rd(T,S,Z)*rau0 = -a0*(1+.5*lambda*dT+mu*Z+nu*dS)*dT+b0*dS
206   rn_a0       =  1.6550e-1      !  thermal expension coefficient (nn_eos= 1)
207   rn_b0       =  7.6554e-1      !  saline  expension coefficient (nn_eos= 1)
208   rn_lambda1  =  5.9520e-2      !  cabbeling coeff in T^2  (=0 for linear eos)
209   rn_lambda2  =  7.4914e-4      !  cabbeling coeff in S^2  (=0 for linear eos)
210   rn_mu1      =  1.4970e-4      !  thermobaric coeff. in T (=0 for linear eos)
211   rn_mu2      =  1.1090e-5      !  thermobaric coeff. in S (=0 for linear eos)
212   rn_nu       =  2.4341e-3      !  cabbeling coeff in T*S  (=0 for linear eos)
213!!org GYRE   rn_alpha    =   2.0e-4  !  thermal expension coefficient (nn_eos= 1 or 2)
214!!org GYRE   rn_beta     =   7.7e-4  !  saline  expension coefficient (nn_eos= 2)
215!!org  caution  now a0 = alpha / rau0   with rau0 = 1026
216/
217!-----------------------------------------------------------------------
218&namtra_adv    !   advection scheme for tracer
219!-----------------------------------------------------------------------
220   ln_traadv_cen2   =  .false.   !  2nd order centered scheme
221   ln_traadv_tvd    =  .true.    !  TVD scheme
222   ln_traadv_muscl  =  .false.   !  MUSCL scheme
223   ln_traadv_muscl2 =  .false.   !  MUSCL2 scheme + cen2 at boundaries
224   ln_traadv_ubs    =  .false.   !  UBS scheme
225   ln_traadv_qck    =  .false.   !  QUICKEST scheme
226   ln_traadv_msc_ups=  .false.   !  use upstream scheme within muscl
227/
228!-----------------------------------------------------------------------
229&namtra_adv_mle !  mixed layer eddy parametrisation (Fox-Kemper param)
230!-----------------------------------------------------------------------
231/
232!----------------------------------------------------------------------------------
233&namtra_ldf    !   lateral diffusion scheme for tracers
234!----------------------------------------------------------------------------------
235   rn_aeiv_0        =     0.    !  eddy induced velocity coefficient [m2/s]
236   rn_aht_0         =  1000.    !  horizontal eddy diffusivity for tracers [m2/s]
237/
238!-----------------------------------------------------------------------
239&namtra_dmp    !   tracer: T & S newtonian damping
240!-----------------------------------------------------------------------
241   ln_tradmp   =  .false.  !  add a damping termn (T) or not (F)
242/
243!-----------------------------------------------------------------------
244&namdyn_adv    !   formulation of the momentum advection
245!-----------------------------------------------------------------------
246/
247!-----------------------------------------------------------------------
248&namdyn_vor    !   option of physics/algorithm (not control by CPP keys)
249!-----------------------------------------------------------------------
250   ln_dynvor_ene = .true.  !  energy    conserving scheme 
251   ln_dynvor_ens = .false. !  enstrophy conserving scheme   
252   ln_dynvor_een = .false. !  energy & enstrophy scheme
253/
254!-----------------------------------------------------------------------
255&namdyn_hpg    !   Hydrostatic pressure gradient option
256!-----------------------------------------------------------------------
257   ln_hpg_zco  = .true.    !  z-coordinate - full steps
258   ln_hpg_zps  = .false.   !  z-coordinate - partial steps (interpolation)
259/
260!-----------------------------------------------------------------------
261!namdyn_spg    !   surface pressure gradient   (CPP key only)
262!-----------------------------------------------------------------------
263
264!-----------------------------------------------------------------------
265&namdyn_ldf    !   lateral diffusion on momentum
266!-----------------------------------------------------------------------
267   rn_ahm_0_lap     = 100000.   !  horizontal laplacian eddy viscosity   [m2/s]
268/
269!-----------------------------------------------------------------------
270&namzdf        !   vertical physics
271!-----------------------------------------------------------------------
272   nn_evdm     =    1      !  evd apply on tracer (=0) or on tracer and momentum (=1)
273/
274!-----------------------------------------------------------------------
275&namzdf_ric    !   richardson number dependent vertical diffusion       ("key_zdfric" )
276!-----------------------------------------------------------------------
277/
278!-----------------------------------------------------------------------
279&namzdf_tke    !   turbulent eddy kinetic dependent vertical diffusion  ("key_zdftke")
280!-----------------------------------------------------------------------
281   nn_etau     =   0       !  penetration of tke below the mixed layer (ML) due to internal & intertial waves
282/
283!------------------------------------------------------------------------
284&namzdf_kpp    !   K-Profile Parameterization dependent vertical mixing  ("key_zdfkpp", and optionally:
285!------------------------------------------------------------------------ "key_kppcustom" or "key_kpplktb")
286/
287!-----------------------------------------------------------------------
288&namzdf_gls                !   GLS vertical diffusion                   ("key_zdfgls")
289!-----------------------------------------------------------------------
290/
291!-----------------------------------------------------------------------
292&namzdf_ddm    !   double diffusive mixing parameterization             ("key_zdfddm")
293!-----------------------------------------------------------------------
294/
295!-----------------------------------------------------------------------
296&namzdf_tmx    !   tidal mixing parameterization                        ("key_zdftmx")
297!-----------------------------------------------------------------------
298   ln_tmx_itf  = .false.   !  ITF specific parameterisation
299/
300!-----------------------------------------------------------------------
301&namsol        !   elliptic solver / island / free surface
302!-----------------------------------------------------------------------
303   nn_solv     =      2    !  elliptic solver: =1 preconditioned conjugate gradient (pcg)
304   nn_nmin     =    210    !  minimum of iterations for the SOR solver
305   rn_sor      =  1.96     !  optimal coefficient for SOR solver (to be adjusted with the domain)
306/
307!-----------------------------------------------------------------------
308&nammpp        !   Massively Parallel Processing                        ("key_mpp_mpi)
309!-----------------------------------------------------------------------
310/
311!-----------------------------------------------------------------------
312&namctl        !   Control prints & Benchmark
313!-----------------------------------------------------------------------
314/
315!-----------------------------------------------------------------------
316&namnc4        !   netcdf4 chunking and compression settings            ("key_netcdf4")
317!-----------------------------------------------------------------------
318/
319!-----------------------------------------------------------------------
320&namtrd        !   diagnostics on dynamics and/or tracer trends         ("key_trddyn" and/or "key_trdtra")
321!              !       or mixed-layer trends or barotropic vorticity    ("key_trdmld" or     "key_trdvor")
322!-----------------------------------------------------------------------
323   ln_glo_trd  = .false.   ! (T) global domain averaged diag for T, T^2, KE, and PE
324   ln_dyn_trd  = .false.   ! (T) 3D momentum trend output
325   ln_dyn_mxl  = .FALSE.   ! (T) 2D momentum trends averaged over the mixed layer (not coded yet)
326   ln_vor_trd  = .FALSE.   ! (T) 2D barotropic vorticity trends (not coded yet)
327   ln_KE_trd   = .false.   ! (T) 3D Kinetic   Energy     trends
328   ln_PE_trd   = .false.   ! (T) 3D Potential Energy     trends
329   ln_tra_trd  = .false.    ! (T) 3D tracer trend output
330   ln_tra_mxl  = .false.   ! (T) 2D tracer trends averaged over the mixed layer (not coded yet)
331   nn_trd      = 365       !  print frequency (ln_glo_trd=T) (unit=time step)
332/
333!!gm   nn_ctls     =   0       !  control surface type in mixed-layer trends (0,1 or n<jpk)
334!!gm   rn_ucf      =   1.      !  unit conversion factor (=1 -> /seconds ; =86400. -> /day)
335!!gm   cn_trdrst_in      = "restart_mld"   ! suffix of ocean restart name (input)
336!!gm   cn_trdrst_out     = "restart_mld"   ! suffix of ocean restart name (output)
337!!gm   ln_trdmld_restart = .false.         !  restart for ML diagnostics
338!!gm   ln_trdmld_instant = .false.         !  flag to diagnose trends of instantantaneous or mean ML T/S
339!!gm
340!-----------------------------------------------------------------------
341&namflo       !   float parameters                                      ("key_float")
342!-----------------------------------------------------------------------
343/
344!-----------------------------------------------------------------------
345&namptr       !   Poleward Transport Diagnostic
346!-----------------------------------------------------------------------
347/
348!-----------------------------------------------------------------------
349&namhsb       !  Heat and salt budgets
350!-----------------------------------------------------------------------
351/
352!-----------------------------------------------------------------------
353&namdct        ! transports through sections
354!-----------------------------------------------------------------------
355    nn_dct      = 60       !  time step frequency for transports computing
356    nn_dctwri   = 60       !  time step frequency for transports writing
357    nn_secdebug = 0        !      0 : no section to debug
358/
359!-----------------------------------------------------------------------
360&namobs       !  observation usage switch                               ('key_diaobs')
361!-----------------------------------------------------------------------
362/
363!-----------------------------------------------------------------------
364&nam_asminc   !   assimilation increments                               ('key_asminc')
365!-----------------------------------------------------------------------
366/
367!-----------------------------------------------------------------------
368&namsbc_wave   ! External fields from wave model
369!-----------------------------------------------------------------------
370/
371!-----------------------------------------------------------------------
372&namdyn_nept  !   Neptune effect (simplified: lateral and vertical diffusions removed)
373!-----------------------------------------------------------------------
374   ln_neptramp       = .false.  ! ramp down Neptune velocity in shallow water
375/
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