#!/bin/bash ############################################################ # Author : Simona Flavoni for NEMO # Contact: sflod@locean-ipsl.upmc.fr # 2013 : A.C. Coward added options for testing with XIOS in dettached mode # # sette.sh : principal script of SET TEsts for NEMO (SETTE) # ---------------------------------------------------------------------- # NEMO/SETTE , NEMO Consortium (2010) # Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) # ---------------------------------------------------------------------- # ############################################################# #set -vx set -o posix #set -u #set -e # =========== # DESCRIPTION # =========== # # Variables to be checked by user: # # COMPILER : name of compiler as defined in NEMOGCM/ARCH directory # BATCH_COMMAND_PAR : name of the command for submitting parallel batch jobs # BATCH_COMMAND_SEQ : name of the command for submitting sequential batch jobs # INTERACT_FLAG : flag to run in interactive mode "yes" # to run in batch mode "no" # MPIRUN_FLAG : flag to run in parallel (MPI) "yes" # to run in sequential mode (NB_PROC = 1) "no" # USING_XIOS : flag to control the activation of key_iomput # "yes" to compile using key_iomput and link to the external XIOS library # "no" to compile without key_iomput and link to the old IOIPSL library # USING_MPMD : flag to control the use of stand-alone IO servers # requires USING_XIOS="yes" # "yes" to run in MPMD (detached) mode with stand-alone IO servers # "no" to run in SPMD (attached) mode without separate IO servers # NUM_XIOSERVERS : number of stand-alone IO servers to employ # set to zero if USING_MPMD="no" # # Principal script is sette.sh, that calls # # makenemo : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe # and links to nemo in ${CONFIG_NAME}/EXP00) # # param.cfg : sets and loads following directories: # # FORCING_DIR : is the directory for forcing files (tarfile) # INPUT_DIR : is the directory for input files storing # TMPDIR : is the temporary directory (if needed) # NEMO_VALIDATION_DIR : is the validation directory # # (NOTE: this file is the same for all configrations to be tested with sette) # # all_functions.sh : loads functions used by sette (note: new functions can be added here) # set_namelist : function declared in all_functions that sets namelist parameters # post_test_tidyup : creates validation storage directory and copies required output files # (run.stat and ocean.output) in it after execution of test. # # VALIDATION tree is: # # NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE) # # prepare_exe_dir.sh : defines and creates directory where the test is executed # execution directory takes name of TEST_NAME defined for every test # in sette.sh. (each test in executed in its own directory) # # prepare_job.sh : to generate the script run_job.sh # # fcm_job.sh : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes") # see sette.sh and BATCH_TEMPLATE directory # # NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which # can be found paths to the input tar file) # NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR} # directory # NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists # remain in ${NEW_CONF}/EXP00 # # NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of # executed commands # # NOTE: if sette.sh is stopped in output.sette there is written the last command # executed by sette.sh # # example use: ./sette.sh ######################################################################################### # # Compiler among those in NEMOGCM/ARCH COMPILER=X64_ADA export BATCH_COMMAND_PAR="llsubmit" export BATCH_COMMAND_SEQ=$BATCH_COMMAND_PAR export INTERACT_FLAG="no" export MPIRUN_FLAG="yes" export USING_XIOS="yes" export USING_ICEBERGS="yes" # export DEL_KEYS="key_iomput" if [ ${USING_XIOS} == "yes" ] then export DEL_KEYS="" fi # # Settings which control the use of stand alone servers (only relevant if using xios) # export USING_MPMD="no" export NUM_XIOSERVERS=4 export JOB_PREFIX=batch-mpmd # if [ ${USING_MPMD} == "no" ] then export NUM_XIOSERVERS=0 export JOB_PREFIX=batch fi # # if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no" ] then echo "Incompatible choices. MPMD mode requires the XIOS server" exit fi # Directory to run the tests SETTE_DIR=$(cd $(dirname "$0"); pwd) MAIN_DIR=$(dirname $SETTE_DIR) CONFIG_DIR0=${MAIN_DIR}/cfgs TOOLS_DIR=${MAIN_DIR}/tools CMP_NAM=${1:-$COMPILER} # Copy job_batch_COMPILER file for specific compiler into job_batch_template cd ${SETTE_DIR} cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template || exit # Description of configuration tested: # GYRE_PISCES : 1 # ORCA2_ICE_PISCES : 2 # ORCA2_OFF_PISCES : 3 # AMM12 : 4 # SAS : 5 # ORCA2_ICE_OBS : 6 # AGRIF : 7 & 8 test AGRIF in a double zoom configuration in the nordic seas + 1 zoom in the eq. Pacific (AGRIF_DEMO) # and check that key_agrif without zoom = no key_agrif # SPITZ12 : 9 regional configuration including sea-ice and tides (Spitzbergen) for config in 1 2 3 4 5 6 7 8 9 do # ----------- # GYRE_PISCES # ----------- if [ ${config} -eq 1 ] ; then ## Restartability tests for GYRE_PISCES export TEST_NAME="LONG" cd ${MAIN_DIR} . ./makenemo -m ${CMP_NAM} -n GYRE_PISCES_ST -r GYRE_PISCES -j 8 del_key ${DEL_KEYS} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=8 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"GYREPIS_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 1080 set_namelist namelist_cfg nn_stock 540 set_namelist namelist_cfg ln_linssh .true. set_namelist namelist_cfg jpni 2 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"GYREPIS_SHORT\" set_namelist namelist_cfg nn_it000 541 set_namelist namelist_cfg nn_itend 1080 set_namelist namelist_cfg nn_stock 540 set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_cfg ln_linssh .true. set_namelist namelist_cfg jpni 2 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_top_cfg ln_rsttr .true. set_namelist namelist_top_cfg nn_rsttr 2 set_namelist namelist_cfg cn_ocerst_in \"GYREPIS_LONG_00000540_restart\" set_namelist namelist_top_cfg cn_trcrst_in \"GYREPIS_LONG_00000540_restart_trc\" if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/GYREPIS_LONG_00000540_restart_${L_NPROC}.nc . ln -sf ../LONG/GYREPIS_LONG_00000540_restart_trc_${L_NPROC}.nc . done cd ${SETTE_DIR} . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} ## Reproducibility tests for GYRE_PISCES export TEST_NAME="REPRO_2_4" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=8 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"GYREPIS_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 1080 set_namelist namelist_cfg ln_linssh .true. set_namelist namelist_cfg jpni 2 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_4_2" . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=8 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"GYREPIS_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 1080 set_namelist namelist_cfg ln_linssh .true. set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 2 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # ----------------- # ORCA2_ICE_PISCES # ----------------- if [ ${config} -eq 2 ] ; then ## Restartability tests for ORCA2_ICE_PISCES export TEST_NAME="LONG" cd ${MAIN_DIR} . ./makenemo -m ${CMP_NAM} -n ORCA2_ICE_PISCES_ST -r ORCA2_ICE_PISCES -j 8 del_key ${DEL_KEYS} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3P_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 1000 set_namelist namelist_cfg nn_stock 500 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_use_calving .true. set_namelist namelist_cfg ln_wave .true. set_namelist namelist_cfg ln_cdgw .true. set_namelist namelist_cfg ln_sdw .true. set_namelist namelist_cfg nn_sdrift 1 set_namelist namelist_cfg ln_stcor .true. set_namelist namelist_cfg ln_tauwoc .true. # if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi # set_namelist namelist_ice_cfg ln_icediachk .true. set_namelist namelist_top_cfg ln_trcdta .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_presatm .false. set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_dust .false. set_namelist namelist_pisces_cfg ln_solub .false. set_namelist namelist_pisces_cfg ln_river .false. set_namelist namelist_pisces_cfg ln_ndepo .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3P_SHORT\" set_namelist namelist_cfg nn_it000 501 set_namelist namelist_cfg nn_itend 1000 set_namelist namelist_cfg nn_stock 500 set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg nn_test_icebergs -1 set_namelist namelist_cfg ln_wave .true. set_namelist namelist_cfg ln_cdgw .true. set_namelist namelist_cfg ln_sdw .true. set_namelist namelist_cfg nn_sdrift 1 set_namelist namelist_cfg ln_stcor .true. set_namelist namelist_cfg ln_tauwoc .true. # if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi # set_namelist namelist_ice_cfg ln_icediachk .true. set_namelist namelist_top_cfg ln_rsttr .true. set_namelist namelist_top_cfg nn_rsttr 2 set_namelist namelist_cfg cn_ocerst_in \"O2L3P_LONG_00000500_restart\" set_namelist namelist_top_cfg cn_trcrst_in \"O2L3P_LONG_00000500_restart_trc\" set_namelist namelist_ice_cfg cn_icerst_in \"O2L3P_LONG_00000500_restart_ice\" set_namelist namelist_top_cfg ln_trcdta .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_presatm .false. set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_dust .false. set_namelist namelist_pisces_cfg ln_solub .false. set_namelist namelist_pisces_cfg ln_river .false. set_namelist namelist_pisces_cfg ln_ndepo .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/O2L3P_LONG_00000500_restart_${L_NPROC}.nc . ln -sf ../LONG/O2L3P_LONG_00000500_restart_trc_${L_NPROC}.nc . ln -sf ../LONG/O2L3P_LONG_00000500_restart_ice_${L_NPROC}.nc . if [ ${USING_ICEBERGS} == "yes" ] then ln -sf ../LONG/O2L3P_LONG_icebergs_00000500_restart_${L_NPROC}.nc O2L3P_LONG_00000500_restart_icebergs_${L_NPROC}.nc fi done if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} ## Reproducibility tests for ORCA2_ICE_PISCES export TEST_NAME="REPRO_4_8" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3P_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 1000 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_wave .true. set_namelist namelist_cfg ln_cdgw .true. set_namelist namelist_cfg ln_sdw .true. set_namelist namelist_cfg nn_sdrift 1 set_namelist namelist_cfg ln_stcor .true. set_namelist namelist_cfg ln_tauwoc .true. if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi set_namelist namelist_top_cfg ln_trcdta .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_presatm .false. set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_dust .false. set_namelist namelist_pisces_cfg ln_solub .false. set_namelist namelist_pisces_cfg ln_river .false. set_namelist namelist_pisces_cfg ln_ndepo .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3P_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 1000 set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_wave .true. set_namelist namelist_cfg ln_cdgw .true. set_namelist namelist_cfg ln_sdw .true. set_namelist namelist_cfg nn_sdrift 1 set_namelist namelist_cfg ln_stcor .true. set_namelist namelist_cfg ln_tauwoc .true. if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi set_namelist namelist_top_cfg ln_trcdta .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_presatm .false. set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_dust .false. set_namelist namelist_pisces_cfg ln_solub .false. set_namelist namelist_pisces_cfg ln_river .false. set_namelist namelist_pisces_cfg ln_ndepo .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # ---------------- # ORCA2_OFF_PISCES # ---------------- if [ ${config} -eq 3 ] ; then ## Restartability tests for ORCA2_OFF_PISCES export TEST_NAME="LONG" cd ${MAIN_DIR} . ./makenemo -m ${CMP_NAM} -n ORCA2_OFF_PISCES_ST -r ORCA2_OFF_PISCES -j 8 del_key ${DEL_KEYS} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"OFFP_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 380 set_namelist namelist_cfg nn_stock 190 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_qsr_rgb .true. set_namelist namelist_top_cfg ln_trcdta .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_presatm .false. set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_dust .false. set_namelist namelist_pisces_cfg ln_solub .false. set_namelist namelist_pisces_cfg ln_river .false. set_namelist namelist_pisces_cfg ln_ndepo .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"OFFP_SHORT\" set_namelist namelist_cfg nn_it000 191 set_namelist namelist_cfg nn_itend 380 set_namelist namelist_cfg nn_stock 190 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_qsr_rgb .true. set_namelist namelist_top_cfg ln_rsttr .true. set_namelist namelist_top_cfg nn_rsttr 2 set_namelist namelist_top_cfg cn_trcrst_in \"OFFP_LONG_00000190_restart_trc\" for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/OFFP_LONG_00000190_restart_trc_${L_NPROC}.nc . done # put ln_ironsed, ln_river, ln_ndepo, ln_dust # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_presatm .false. set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_dust .false. set_namelist namelist_pisces_cfg ln_solub .false. set_namelist namelist_pisces_cfg ln_river .false. set_namelist namelist_pisces_cfg ln_ndepo .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} ## Reproducibility tests for ORCA2_OFF_PISCES export TEST_NAME="REPRO_4_8" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"OFFP_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 380 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_qsr_rgb .true. set_namelist namelist_top_cfg ln_trcdta .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_presatm .false. set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_dust .false. set_namelist namelist_pisces_cfg ln_solub .false. set_namelist namelist_pisces_cfg ln_river .false. set_namelist namelist_pisces_cfg ln_ndepo .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"OFFP_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 380 set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_qsr_rgb .true. set_namelist namelist_top_cfg ln_trcdta .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_presatm .false. set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_dust .false. set_namelist namelist_pisces_cfg ln_solub .false. set_namelist namelist_pisces_cfg ln_river .false. set_namelist namelist_pisces_cfg ln_ndepo .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # ----- # AMM12 # ----- if [ ${config} -eq 4 ] ; then ## Restartability tests for AMM12 export TEST_NAME="LONG" cd ${MAIN_DIR} . ./makenemo -m ${CMP_NAM} -n AMM12_ST -r AMM12 -j 8 del_key ${DEL_KEYS} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AMM12_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 576 set_namelist namelist_cfg nn_stock 288 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AMM12_SHORT\" set_namelist namelist_cfg nn_it000 289 set_namelist namelist_cfg nn_itend 576 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_cfg cn_ocerst_in \"AMM12_LONG_00000288_restart\" set_namelist namelist_cfg nn_date0 20120102 for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/AMM12_LONG_00000288_restart_${L_NPROC}.nc . done if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} ## Reproducibility tests for AMM12 export TEST_NAME="REPRO_8_4" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AMM12_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 576 set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_4_8" . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AMM12_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 576 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # --------- # ORCA2_SAS # --------- if [ ${config} -eq 5 ] ; then ## Restartability tests export TEST_NAME="LONG" cd ${MAIN_DIR} . ./makenemo -m ${CMP_NAM} -n ORCA2_SAS_ICE_ST -r ORCA2_SAS_ICE -j 8 del_key ${DEL_KEYS} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"SAS\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 240 set_namelist namelist_cfg nn_stock 120 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_ice_cfg ln_icediachk .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"SAS\" set_namelist namelist_cfg nn_it000 121 set_namelist namelist_cfg nn_itend 240 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_cfg nn_date0 010109 set_namelist namelist_cfg cn_ocerst_in \"SAS_00000120_restart\" set_namelist namelist_ice_cfg cn_icerst_in \"SAS_00000120_restart_ice\" if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/SAS_00000120_restart_${L_NPROC}.nc . ln -sf ../LONG/SAS_00000120_restart_ice_${L_NPROC}.nc . done cd ${SETTE_DIR} . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} ## Reproducibility tests export TEST_NAME="REPRO_4_8" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"SAS_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 75 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"SAS_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 75 set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # -------------- # ORCA2_ICE_OBS # -------------- ## Test assimilation interface code, OBS and ASM for reproducibility ## Restartability not tested (ASM code not restartable while increments are being applied) if [ ${config} -eq 6 ] ; then ## Reproducibility tests export TEST_NAME="REPRO_4_8" cd ${MAIN_DIR} . ./makenemo -m ${CMP_NAM} -n ORCA2_ICE_OBS_ST -r ORCA2_ICE_PISCES -d "OCE ICE" -j 8 add_key "key_asminc" del_key "key_top" cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3OBS_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 75 set_namelist namelist_cfg ln_read_cfg .true. set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_diaobs .true. set_namelist namelist_cfg ln_t3d .true. set_namelist namelist_cfg ln_s3d .true. set_namelist namelist_cfg ln_sst .true. set_namelist namelist_cfg ln_sla .true. set_namelist namelist_cfg ln_sic .true. set_namelist namelist_cfg ln_vel3d .true. set_namelist namelist_cfg ln_bkgwri .true. set_namelist namelist_cfg ln_trainc .true. set_namelist namelist_cfg ln_dyninc .true. set_namelist namelist_cfg ln_sshinc .true. set_namelist namelist_cfg ln_asmiau .true. #remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration) set_namelist namelist_top_cfg ln_trcdta .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_presatm .false. set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_dust .false. set_namelist namelist_pisces_cfg ln_solub .false. set_namelist namelist_pisces_cfg ln_river .false. set_namelist namelist_pisces_cfg ln_ndepo .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3OBS_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 75 set_namelist namelist_cfg ln_read_cfg .true. set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_diaobs .true. set_namelist namelist_cfg ln_t3d .true. set_namelist namelist_cfg ln_s3d .true. set_namelist namelist_cfg ln_sst .true. set_namelist namelist_cfg ln_sla .true. set_namelist namelist_cfg ln_sic .true. set_namelist namelist_cfg ln_vel3d .true. set_namelist namelist_cfg ln_bkgwri .true. set_namelist namelist_cfg ln_trainc .true. set_namelist namelist_cfg ln_dyninc .true. set_namelist namelist_cfg ln_sshinc .true. set_namelist namelist_cfg ln_asmiau .true. #remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration) set_namelist namelist_top_cfg ln_trcdta .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_presatm .false. set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_dust .false. set_namelist namelist_pisces_cfg ln_solub .false. set_namelist namelist_pisces_cfg ln_river .false. set_namelist namelist_pisces_cfg ln_ndepo .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # ------------ # AGRIF ICE # ----------- if [ ${config} -eq 7 ] ; then ## Restartability tests export TEST_NAME="LONG" cd ${MAIN_DIR} . ./makenemo -m ${CMP_NAM} -n AGRIF_DEMO_ST -r AGRIF_DEMO -j 8 del_key ${DEL_KEYS} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=16 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AGRIF_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 20 set_namelist namelist_cfg nn_stock 10 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist 1_namelist_cfg cn_exp \"AGRIF_LONG\" set_namelist 1_namelist_cfg nn_it000 1 set_namelist 1_namelist_cfg nn_itend 20 set_namelist 1_namelist_cfg nn_stock 10 set_namelist 1_namelist_cfg ln_ctl .false. set_namelist 1_namelist_cfg sn_cfctl%l_config .true. set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 2_namelist_cfg cn_exp \"AGRIF_LONG\" set_namelist 2_namelist_cfg nn_it000 1 set_namelist 2_namelist_cfg nn_itend 80 set_namelist 2_namelist_cfg nn_stock 40 set_namelist 2_namelist_cfg ln_ctl .false. set_namelist 2_namelist_cfg sn_cfctl%l_config .true. set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 3_namelist_cfg cn_exp \"AGRIF_LONG\" set_namelist 3_namelist_cfg nn_it000 1 set_namelist 3_namelist_cfg nn_itend 240 set_namelist 3_namelist_cfg nn_stock 120 set_namelist 3_namelist_cfg ln_ctl .false. set_namelist 3_namelist_cfg sn_cfctl%l_config .true. set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AGRIF_SHORT\" set_namelist namelist_cfg nn_it000 11 set_namelist namelist_cfg nn_itend 20 set_namelist namelist_cfg nn_stock 10 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist 1_namelist_cfg cn_exp \"AGRIF_SHORT\" set_namelist 1_namelist_cfg nn_it000 11 set_namelist 1_namelist_cfg nn_itend 20 set_namelist 1_namelist_cfg nn_stock 10 set_namelist 1_namelist_cfg ln_ctl .false. set_namelist 1_namelist_cfg sn_cfctl%l_config .true. set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 1_namelist_cfg ln_rstart .true. set_namelist 1_namelist_cfg nn_rstctl 2 set_namelist 2_namelist_cfg cn_exp \"AGRIF_SHORT\" set_namelist 2_namelist_cfg nn_it000 41 set_namelist 2_namelist_cfg nn_itend 80 set_namelist 2_namelist_cfg nn_stock 40 set_namelist 2_namelist_cfg ln_ctl .false. set_namelist 2_namelist_cfg sn_cfctl%l_config .true. set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 2_namelist_cfg ln_rstart .true. set_namelist 2_namelist_cfg nn_rstctl 2 set_namelist 3_namelist_cfg cn_exp \"AGRIF_SHORT\" set_namelist 3_namelist_cfg nn_it000 121 set_namelist 3_namelist_cfg nn_itend 240 set_namelist 3_namelist_cfg nn_stock 120 set_namelist 3_namelist_cfg ln_ctl .false. set_namelist 3_namelist_cfg sn_cfctl%l_config .true. set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 3_namelist_cfg ln_rstart .true. set_namelist 3_namelist_cfg nn_rstctl 2 set_namelist namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000010_restart\" set_namelist namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000010_restart_ice\" set_namelist 1_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000010_restart\" set_namelist 1_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000010_restart_ice\" set_namelist 2_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000040_restart\" set_namelist 2_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000040_restart_ice\" set_namelist 3_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000120_restart\" set_namelist 3_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000120_restart_ice\" for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/AGRIF_LONG_00000010_restart_${L_NPROC}.nc . ln -sf ../LONG/AGRIF_LONG_00000010_restart_ice_${L_NPROC}.nc . ln -sf ../LONG/1_AGRIF_LONG_00000010_restart_${L_NPROC}.nc . ln -sf ../LONG/1_AGRIF_LONG_00000010_restart_ice_${L_NPROC}.nc . ln -sf ../LONG/2_AGRIF_LONG_00000040_restart_${L_NPROC}.nc . ln -sf ../LONG/2_AGRIF_LONG_00000040_restart_ice_${L_NPROC}.nc . ln -sf ../LONG/3_AGRIF_LONG_00000120_restart_${L_NPROC}.nc . ln -sf ../LONG/3_AGRIF_LONG_00000120_restart_ice_${L_NPROC}.nc . done if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} ## Reproducibility tests export TEST_NAME="REPRO_4_8" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AGRIF_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 20 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist 1_namelist_cfg cn_exp \"AGRIF_48\" set_namelist 1_namelist_cfg nn_it000 1 set_namelist 1_namelist_cfg nn_itend 20 set_namelist 1_namelist_cfg jpni 4 set_namelist 1_namelist_cfg jpnj 8 set_namelist 1_namelist_cfg ln_ctl .false. set_namelist 1_namelist_cfg sn_cfctl%l_config .true. set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 2_namelist_cfg cn_exp \"AGRIF_48\" set_namelist 2_namelist_cfg nn_it000 1 set_namelist 2_namelist_cfg nn_itend 80 set_namelist 2_namelist_cfg jpni 4 set_namelist 2_namelist_cfg jpnj 8 set_namelist 2_namelist_cfg ln_ctl .false. set_namelist 2_namelist_cfg sn_cfctl%l_config .true. set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 3_namelist_cfg cn_exp \"AGRIF_48\" set_namelist 3_namelist_cfg nn_it000 1 set_namelist 3_namelist_cfg nn_itend 240 set_namelist 3_namelist_cfg jpni 4 set_namelist 3_namelist_cfg jpnj 8 set_namelist 3_namelist_cfg ln_ctl .false. set_namelist 3_namelist_cfg sn_cfctl%l_config .true. set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AGRIF_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 20 set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist 1_namelist_cfg cn_exp \"AGRIF_84\" set_namelist 1_namelist_cfg nn_it000 1 set_namelist 1_namelist_cfg nn_itend 20 set_namelist 1_namelist_cfg jpni 8 set_namelist 1_namelist_cfg jpnj 4 set_namelist 1_namelist_cfg ln_ctl .false. set_namelist 1_namelist_cfg sn_cfctl%l_config .true. set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 2_namelist_cfg cn_exp \"AGRIF_84\" set_namelist 2_namelist_cfg nn_it000 1 set_namelist 2_namelist_cfg nn_itend 80 set_namelist 2_namelist_cfg jpni 8 set_namelist 2_namelist_cfg jpnj 4 set_namelist 2_namelist_cfg ln_ctl .false. set_namelist 2_namelist_cfg sn_cfctl%l_config .true. set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 3_namelist_cfg cn_exp \"AGRIF_84\" set_namelist 3_namelist_cfg nn_it000 1 set_namelist 3_namelist_cfg nn_itend 240 set_namelist 3_namelist_cfg jpni 8 set_namelist 3_namelist_cfg jpnj 4 set_namelist 3_namelist_cfg ln_ctl .false. set_namelist 3_namelist_cfg sn_cfctl%l_config .true. set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} ## test code corruption with AGRIF (phase 1) ==> Compile with key_agrif but run with no zoom export TEST_NAME="ORCA2" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"ORCA2\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 150 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. # Set the number of fine grids to zero: sed -i "1s/.*/0/" ${EXE_DIR}/AGRIF_FixedGrids.in if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi ## test code corruption with AGRIF (phase 2) ==> Compile without key_agrif (to be compared with AGRIF_DEMO_ST/ORCA2) if [ ${config} -eq 8 ] ; then export TEST_NAME="ORCA2" cd ${MAIN_DIR} . ./makenemo -m ${CMP_NAM} -n AGRIF_DEMO_NOAGRIF_ST -r AGRIF_DEMO -j 8 del_key "key_agrif" cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"ORCA2\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 150 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. # if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # ------- # SPITZ12 # ------- if [ ${config} -eq 9 ] ; then ## Restartability tests export TEST_NAME="LONG" cd ${MAIN_DIR} . ./makenemo -m ${CMP_NAM} -n SPITZ12_ST -r SPITZ12 -j 8 del_key ${DEL_KEYS} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"S12_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 240 set_namelist namelist_cfg nn_stock 120 set_namelist namelist_cfg nn_date0 20020101 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. #set_namelist namelist_ice_cfg ln_icediachk .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"S12_SHORT\" set_namelist namelist_cfg nn_it000 121 set_namelist namelist_cfg nn_itend 240 set_namelist namelist_cfg nn_stock 120 set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg cn_ocerst_in \"S12_LONG_00000120_restart\" set_namelist namelist_ice_cfg cn_icerst_in \"S12_LONG_00000120_restart_ice\" for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/S12_LONG_00000120_restart_${L_NPROC}.nc . ln -sf ../LONG/S12_LONG_00000120_restart_ice_${L_NPROC}.nc . done if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} ## Reproducibility tests export TEST_NAME="REPRO_4_8" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./param.cfg . ./all_functions.sh . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"S12_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 120 set_namelist namelist_cfg nn_date0 20020101 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"S12_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend 120 set_namelist namelist_cfg nn_date0 20020101 set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg ln_ctl .false. set_namelist namelist_cfg sn_cfctl%l_config .true. set_namelist namelist_cfg sn_cfctl%l_runstat .true. if [ ${USING_MPMD} == "yes" ] ; then set_xio_using_server iodef.xml true else set_xio_using_server iodef.xml false fi cd ${SETTE_DIR} . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi done