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sette_reference-configurations.sh in utils/CI/sette – NEMO

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source: utils/CI/sette/sette_reference-configurations.sh @ 12428

Last change on this file since 12428 was 12428, checked in by mathiot, 4 years ago
merge sette_top_pisces_lbc into sette + add ifort bathc template for MetO computer
Property svn:executable set to ``*
File size: 56.2 KB

Rev	Line
[3520]	1	#!/bin/bash
[3708]	2	############################################################
[3520]	3	# Author : Simona Flavoni for NEMO
[4245]	4	# Contact: sflod@locean-ipsl.upmc.fr
	5	# 2013 : A.C. Coward added options for testing with XIOS in dettached mode
[3520]	6	#
	7	# sette.sh : principal script of SET TEsts for NEMO (SETTE)
	8	# ----------------------------------------------------------------------
	9	# NEMO/SETTE , NEMO Consortium (2010)
	10	# Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt)
	11	# ----------------------------------------------------------------------
	12	#
	13	#############################################################
[7744]	14	#set -vx
[3520]	15	set -o posix
	16	#set -u
	17	#set -e
[4245]	18	# ===========
[3520]	19	# DESCRIPTION
	20	# ===========
	21	#
	22	# Variables to be checked by user:
	23	#
[4245]	24	# COMPILER : name of compiler as defined in NEMOGCM/ARCH directory
	25	# BATCH_COMMAND_PAR : name of the command for submitting parallel batch jobs
	26	# BATCH_COMMAND_SEQ : name of the command for submitting sequential batch jobs
	27	# INTERACT_FLAG : flag to run in interactive mode "yes"
	28	# to run in batch mode "no"
	29	# MPIRUN_FLAG : flag to run in parallel (MPI) "yes"
	30	# to run in sequential mode (NB_PROC = 1) "no"
	31	# USING_XIOS : flag to control the activation of key_iomput
	32	# "yes" to compile using key_iomput and link to the external XIOS library
	33	# "no" to compile without key_iomput and link to the old IOIPSL library
	34	# USING_MPMD : flag to control the use of stand-alone IO servers
	35	# requires USING_XIOS="yes"
	36	# "yes" to run in MPMD (detached) mode with stand-alone IO servers
	37	# "no" to run in SPMD (attached) mode without separate IO servers
	38	# NUM_XIOSERVERS : number of stand-alone IO servers to employ
	39	# set to zero if USING_MPMD="no"
[3520]	40	#
	41	# Principal script is sette.sh, that calls
	42	#
[4245]	43	# makenemo : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
[9576]	44	# and links to nemo in ${CONFIG_NAME}/EXP00)
[3520]	45	#
	46	# param.cfg : sets and loads following directories:
	47	#
[4245]	48	# FORCING_DIR : is the directory for forcing files (tarfile)
	49	# INPUT_DIR : is the directory for input files storing
	50	# TMPDIR : is the temporary directory (if needed)
[3520]	51	# NEMO_VALIDATION_DIR : is the validation directory
	52	#
	53	# (NOTE: this file is the same for all configrations to be tested with sette)
	54	#
[4245]	55	# all_functions.sh : loads functions used by sette (note: new functions can be added here)
	56	# set_namelist : function declared in all_functions that sets namelist parameters
	57	# post_test_tidyup : creates validation storage directory and copies required output files
[9019]	58	# (run.stat and ocean.output) in it after execution of test.
[3520]	59	#
[4245]	60	# VALIDATION tree is:
[3520]	61	#
	62	# NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
	63	#
	64	# prepare_exe_dir.sh : defines and creates directory where the test is executed
[4245]	65	# execution directory takes name of TEST_NAME defined for every test
	66	# in sette.sh. (each test in executed in its own directory)
[3520]	67	#
[10755]	68	# set_valid_dir : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
	69	#
[10698]	70	# clean_valid_dir : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
	71	# ( not doing it could lead to false positive )
	72	#
[4245]	73	# prepare_job.sh : to generate the script run_job.sh
[3520]	74	#
[4245]	75	# fcm_job.sh : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
	76	# see sette.sh and BATCH_TEMPLATE directory
[3520]	77	#
[4245]	78	# NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
	79	# can be found paths to the input tar file)
	80	# NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
	81	# directory
	82	# NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
	83	# remain in ${NEW_CONF}/EXP00
[3520]	84	#
[4245]	85	# NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
	86	# executed commands
[3520]	87	#
[4245]	88	# NOTE: if sette.sh is stopped in output.sette there is written the last command
	89	# executed by sette.sh
[3520]	90	#
[4245]	91	# example use: ./sette.sh
	92	#########################################################################################
[3520]	93	#
[10687]	94	# LOAD param value
[10717]	95	SETTE_DIR=$(cd $(dirname "$0"); pwd)
	96	MAIN_DIR=$(dirname $SETTE_DIR)
[10687]	97	. ./param.cfg
[7743]	98
[10687]	99	export BATCH_COMMAND_PAR=${BATCH_CMD}
	100	export BATCH_COMMAND_SEQ=${BATCH_CMD}
[4990]	101	export INTERACT_FLAG="no"
[4245]	102	export MPIRUN_FLAG="yes"
[9941]	103	export USING_ICEBERGS="yes"
[3520]	104	#
[4245]	105	export DEL_KEYS="key_iomput"
	106	if [ ${USING_XIOS} == "yes" ]
	107	then
	108	export DEL_KEYS=""
	109	fi
[3520]	110	#
[10687]	111	export ADD_KEYS=""
	112	if [ ${ADD_NOSIGNEDZERO} == "yes" ]
	113	then
	114	export ADD_KEYS="key_nosignedzero"
	115	fi
	116	#
[4245]	117	# Settings which control the use of stand alone servers (only relevant if using xios)
[3520]	118	#
[10632]	119	export NUM_XIOSERVERS=4
[11140]	120	export JOB_PREFIX=${JOB_PREFIX_MPMD}
[3520]	121	#
[4245]	122	if [ ${USING_MPMD} == "no" ]
	123	then
	124	export NUM_XIOSERVERS=0
[11140]	125	export JOB_PREFIX=${JOB_PREFIX_NOMPMD}
[4245]	126	fi
[3520]	127	#
	128	#
[10573]	129	if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no" ]
[4245]	130	then
	131	echo "Incompatible choices. MPMD mode requires the XIOS server"
	132	exit
	133	fi
[3520]	134
	135	# Directory to run the tests
[9602]	136	CONFIG_DIR0=${MAIN_DIR}/cfgs
	137	TOOLS_DIR=${MAIN_DIR}/tools
[3520]	138
	139	CMP_NAM=${1:-$COMPILER}
	140	# Copy job_batch_COMPILER file for specific compiler into job_batch_template
	141	cd ${SETTE_DIR}
[4245]	142	cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template \|\| exit
[10747]	143	# Description of available configurations:
	144	# GYRE_PISCES :
	145	# ORCA2_ICE_PISCES :
	146	# ORCA2_OFF_PISCES :
	147	# AMM12 :
	148	# SAS :
	149	# ORCA2_ICE_OBS :
	150	# AGRIF : test AGRIF in a double zoom configuration in the nordic seas + 1 zoom in the eq. Pacific (AGRIF_DEMO)
	151	# and check that key_agrif without zoom = no key_agrif
	152	# SPITZ12 : regional configuration including sea-ice and tides (Spitzbergen)
[4147]	153
[10747]	154	for config in ${TEST_CONFIGS}
[3520]	155	do
	156
[9518]	157	# -----------
	158	# GYRE_PISCES
	159	# -----------
[10747]	160	if [ ${config} == "GYRE_PISCES" ] ; then
[9518]	161	## Restartability tests for GYRE_PISCES
[3520]	162	export TEST_NAME="LONG"
[9658]	163	cd ${MAIN_DIR}
[11497]	164	. ./makenemo -m ${CMP_NAM} -n GYRE_PISCES_ST -r GYRE_PISCES -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[3520]	165	cd ${SETTE_DIR}
[4252]	166	. ./param.cfg
	167	. ./all_functions.sh
	168	. ./prepare_exe_dir.sh
[10755]	169	set_valid_dir
[10698]	170	clean_valid_dir
[3520]	171	JOB_FILE=${EXE_DIR}/run_job.sh
[9525]	172	NPROC=8
[4245]	173	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]	174	cd ${EXE_DIR}
[7715]	175	set_namelist namelist_cfg cn_exp \"GYREPIS_LONG\"
[4147]	176	set_namelist namelist_cfg nn_it000 1
[9560]	177	set_namelist namelist_cfg nn_itend 1080
	178	set_namelist namelist_cfg nn_stock 540
[7646]	179	set_namelist namelist_cfg ln_linssh .true.
[9525]	180	set_namelist namelist_cfg jpni 2
	181	set_namelist namelist_cfg jpnj 4
[10573]	182	set_namelist namelist_cfg sn_cfctl%l_config .true.
	183	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	184	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[4245]	185	if [ ${USING_MPMD} == "yes" ] ; then
	186	set_xio_using_server iodef.xml true
	187	else
	188	set_xio_using_server iodef.xml false
	189	fi
	190	cd ${SETTE_DIR}
[10755]	191	. ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	192
	193	cd ${SETTE_DIR}
	194	export TEST_NAME="SHORT"
[4252]	195	. ./prepare_exe_dir.sh
[10755]	196	set_valid_dir
[10698]	197	clean_valid_dir
[3520]	198	cd ${EXE_DIR}
[7715]	199	set_namelist namelist_cfg cn_exp \"GYREPIS_SHORT\"
[9560]	200	set_namelist namelist_cfg nn_it000 541
	201	set_namelist namelist_cfg nn_itend 1080
	202	set_namelist namelist_cfg nn_stock 540
[4147]	203	set_namelist namelist_cfg ln_rstart .true.
	204	set_namelist namelist_cfg nn_rstctl 2
[7646]	205	set_namelist namelist_cfg ln_linssh .true.
[9525]	206	set_namelist namelist_cfg jpni 2
	207	set_namelist namelist_cfg jpnj 4
[10573]	208	set_namelist namelist_cfg sn_cfctl%l_config .true.
	209	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	210	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[7744]	211	set_namelist namelist_top_cfg ln_rsttr .true.
	212	set_namelist namelist_top_cfg nn_rsttr 2
[9560]	213	set_namelist namelist_cfg cn_ocerst_in \"GYREPIS_LONG_00000540_restart\"
	214	set_namelist namelist_top_cfg cn_trcrst_in \"GYREPIS_LONG_00000540_restart_trc\"
[4245]	215	if [ ${USING_MPMD} == "yes" ] ; then
	216	set_xio_using_server iodef.xml true
	217	else
	218	set_xio_using_server iodef.xml false
	219	fi
[3537]	220	for (( i=1; i<=$NPROC; i++)) ; do
	221	L_NPROC=$(( $i - 1 ))
	222	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9560]	223	ln -sf ../LONG/GYREPIS_LONG_00000540_restart_${L_NPROC}.nc .
	224	ln -sf ../LONG/GYREPIS_LONG_00000540_restart_trc_${L_NPROC}.nc .
[3537]	225	done
[3520]	226	cd ${SETTE_DIR}
[10755]	227	. ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	228	cd ${SETTE_DIR}
[3532]	229	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	230
[9518]	231	## Reproducibility tests for GYRE_PISCES
[9525]	232	export TEST_NAME="REPRO_2_4"
[9658]	233	cd ${MAIN_DIR}
[3520]	234	cd ${SETTE_DIR}
[4252]	235	. ./param.cfg
	236	. ./all_functions.sh
	237	. ./prepare_exe_dir.sh
[10755]	238	set_valid_dir
[10698]	239	clean_valid_dir
[3520]	240	JOB_FILE=${EXE_DIR}/run_job.sh
[9525]	241	NPROC=8
[4245]	242	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	243	cd ${EXE_DIR}
[7715]	244	set_namelist namelist_cfg cn_exp \"GYREPIS_48\"
[4147]	245	set_namelist namelist_cfg nn_it000 1
[9560]	246	set_namelist namelist_cfg nn_itend 1080
[7646]	247	set_namelist namelist_cfg ln_linssh .true.
[9525]	248	set_namelist namelist_cfg jpni 2
	249	set_namelist namelist_cfg jpnj 4
[10573]	250	set_namelist namelist_cfg sn_cfctl%l_config .true.
	251	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	252	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[4245]	253	if [ ${USING_MPMD} == "yes" ] ; then
	254	set_xio_using_server iodef.xml true
	255	else
	256	set_xio_using_server iodef.xml false
	257	fi
[3520]	258	cd ${SETTE_DIR}
[10755]	259	. ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	260	cd ${SETTE_DIR}
	261	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	262
	263	cd ${SETTE_DIR}
[9525]	264	export TEST_NAME="REPRO_4_2"
[4252]	265	. ./prepare_exe_dir.sh
[10755]	266	set_valid_dir
[10698]	267	clean_valid_dir
[3680]	268	JOB_FILE=${EXE_DIR}/run_job.sh
[9525]	269	NPROC=8
[4245]	270	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	271	cd ${EXE_DIR}
[7715]	272	set_namelist namelist_cfg cn_exp \"GYREPIS_84\"
[4147]	273	set_namelist namelist_cfg nn_it000 1
[9560]	274	set_namelist namelist_cfg nn_itend 1080
[7646]	275	set_namelist namelist_cfg ln_linssh .true.
[9525]	276	set_namelist namelist_cfg jpni 4
	277	set_namelist namelist_cfg jpnj 2
[10573]	278	set_namelist namelist_cfg sn_cfctl%l_config .true.
	279	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	280	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[4245]	281	if [ ${USING_MPMD} == "yes" ] ; then
	282	set_xio_using_server iodef.xml true
	283	else
	284	set_xio_using_server iodef.xml false
	285	fi
[3520]	286	cd ${SETTE_DIR}
[10755]	287	. ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	288	cd ${SETTE_DIR}
	289	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3532]	290
[3520]	291	fi
	292
[9518]	293	# -----------------
[9663]	294	# ORCA2_ICE_PISCES
[9518]	295	# -----------------
[10747]	296	if [ ${config} == "ORCA2_ICE_PISCES" ] ; then
[9663]	297	## Restartability tests for ORCA2_ICE_PISCES
[7646]	298	export TEST_NAME="LONG"
[9658]	299	cd ${MAIN_DIR}
[11497]	300	. ./makenemo -m ${CMP_NAM} -n ORCA2_ICE_PISCES_ST -r ORCA2_ICE_PISCES -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[7646]	301	cd ${SETTE_DIR}
	302	. ./param.cfg
	303	. ./all_functions.sh
	304	. ./prepare_exe_dir.sh
[10755]	305	set_valid_dir
[10698]	306	clean_valid_dir
[7646]	307	JOB_FILE=${EXE_DIR}/run_job.sh
	308	NPROC=32
	309	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	310	cd ${EXE_DIR}
	311	set_namelist namelist_cfg cn_exp \"O2L3P_LONG\"
	312	set_namelist namelist_cfg nn_it000 1
[10750]	313	set_namelist namelist_cfg nn_itend 992
	314	set_namelist namelist_cfg nn_stock 496
[7646]	315	set_namelist namelist_cfg jpni 4
	316	set_namelist namelist_cfg jpnj 8
[10573]	317	set_namelist namelist_cfg sn_cfctl%l_config .true.
	318	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	319	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9933]	320	set_namelist namelist_cfg ln_use_calving .true.
[10189]	321	set_namelist namelist_cfg ln_wave .true.
	322	set_namelist namelist_cfg ln_cdgw .true.
	323	set_namelist namelist_cfg ln_sdw .true.
	324	set_namelist namelist_cfg nn_sdrift 1
	325	set_namelist namelist_cfg ln_stcor .true.
	326	set_namelist namelist_cfg ln_tauwoc .true.
[9904]	327	#
	328	if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10687]	329	# for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
[9904]	330	#
[9019]	331	set_namelist namelist_ice_cfg ln_icediachk .true.
[4147]	332	set_namelist namelist_top_cfg ln_trcdta .false.
[12428]	333	set_namelist namelist_top_cfg ln_trcbc .false.
	334	# put ln_ironsed, ln_hydrofe to false
[3520]	335	# if not you need input files, and for tests is not necessary
[4147]	336	set_namelist namelist_pisces_cfg ln_varpar .false.
	337	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	338	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	339	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[9203]	340	# put ln_pisdmp to false : no restoring to global mean value
	341	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	342	if [ ${USING_MPMD} == "yes" ] ; then
	343	set_xio_using_server iodef.xml true
	344	else
	345	set_xio_using_server iodef.xml false
	346	fi
[3520]	347	cd ${SETTE_DIR}
[10755]	348	. ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3532]	349
	350	cd ${SETTE_DIR}
[3520]	351	export TEST_NAME="SHORT"
[4252]	352	. ./prepare_exe_dir.sh
[10755]	353	set_valid_dir
[10698]	354	clean_valid_dir
[3520]	355	cd ${EXE_DIR}
[7646]	356	set_namelist namelist_cfg cn_exp \"O2L3P_SHORT\"
[10750]	357	set_namelist namelist_cfg nn_it000 497
	358	set_namelist namelist_cfg nn_itend 992
	359	set_namelist namelist_cfg nn_stock 496
[4147]	360	set_namelist namelist_cfg ln_rstart .true.
	361	set_namelist namelist_cfg nn_rstctl 2
[7646]	362	set_namelist namelist_cfg jpni 4
	363	set_namelist namelist_cfg jpnj 8
[10573]	364	set_namelist namelist_cfg sn_cfctl%l_config .true.
	365	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	366	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9920]	367	set_namelist namelist_cfg nn_test_icebergs -1
[10189]	368	set_namelist namelist_cfg ln_wave .true.
	369	set_namelist namelist_cfg ln_cdgw .true.
	370	set_namelist namelist_cfg ln_sdw .true.
	371	set_namelist namelist_cfg nn_sdrift 1
	372	set_namelist namelist_cfg ln_stcor .true.
	373	set_namelist namelist_cfg ln_tauwoc .true.
[9904]	374	#
	375	if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10732]	376	# for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
[9904]	377	#
[9933]	378	set_namelist namelist_ice_cfg ln_icediachk .true.
[4147]	379	set_namelist namelist_top_cfg ln_rsttr .true.
	380	set_namelist namelist_top_cfg nn_rsttr 2
[10750]	381	set_namelist namelist_cfg cn_ocerst_in \"O2L3P_LONG_00000496_restart\"
	382	set_namelist namelist_top_cfg cn_trcrst_in \"O2L3P_LONG_00000496_restart_trc\"
	383	set_namelist namelist_ice_cfg cn_icerst_in \"O2L3P_LONG_00000496_restart_ice\"
[12428]	384	set_namelist namelist_top_cfg ln_trcbc .false.
	385	# put ln_ironsed, ln_hydrofe to false
[3520]	386	# if not you need input files, and for tests is not necessary
[4147]	387	set_namelist namelist_pisces_cfg ln_varpar .false.
	388	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	389	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	390	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	391	# put ln_pisdmp to false : no restoring to global mean value
[4147]	392	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[3537]	393	for (( i=1; i<=$NPROC; i++)) ; do
	394	L_NPROC=$(( $i - 1 ))
	395	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[10750]	396	ln -sf ../LONG/O2L3P_LONG_00000496_restart_${L_NPROC}.nc .
	397	ln -sf ../LONG/O2L3P_LONG_00000496_restart_trc_${L_NPROC}.nc .
	398	ln -sf ../LONG/O2L3P_LONG_00000496_restart_ice_${L_NPROC}.nc .
[9904]	399	if [ ${USING_ICEBERGS} == "yes" ]
	400	then
[10750]	401	ln -sf ../LONG/O2L3P_LONG_icebergs_00000496_restart_${L_NPROC}.nc O2L3P_LONG_00000496_restart_icebergs_${L_NPROC}.nc
[9904]	402	fi
[3537]	403	done
[4245]	404	if [ ${USING_MPMD} == "yes" ] ; then
	405	set_xio_using_server iodef.xml true
	406	else
	407	set_xio_using_server iodef.xml false
	408	fi
[3520]	409	cd ${SETTE_DIR}
[10755]	410	. ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	411	cd ${SETTE_DIR}
[3532]	412	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	413
[9663]	414	## Reproducibility tests for ORCA2_ICE_PISCES
[7646]	415	export TEST_NAME="REPRO_4_8"
[9658]	416	cd ${MAIN_DIR}
[3520]	417	cd ${SETTE_DIR}
[4252]	418	. ./param.cfg
	419	. ./all_functions.sh
	420	. ./prepare_exe_dir.sh
[10755]	421	set_valid_dir
[10698]	422	clean_valid_dir
[3520]	423	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	424	NPROC=32
[4245]	425	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	426	cd ${EXE_DIR}
[9019]	427	set_namelist namelist_cfg cn_exp \"O2L3P_48\"
[4147]	428	set_namelist namelist_cfg nn_it000 1
[10750]	429	set_namelist namelist_cfg nn_itend 992
[4147]	430	set_namelist namelist_cfg jpni 4
[7646]	431	set_namelist namelist_cfg jpnj 8
[10573]	432	set_namelist namelist_cfg sn_cfctl%l_config .true.
	433	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	434	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[10189]	435	set_namelist namelist_cfg ln_wave .true.
	436	set_namelist namelist_cfg ln_cdgw .true.
	437	set_namelist namelist_cfg ln_sdw .true.
	438	set_namelist namelist_cfg nn_sdrift 1
	439	set_namelist namelist_cfg ln_stcor .true.
	440	set_namelist namelist_cfg ln_tauwoc .true.
	441
[9904]	442	if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10687]	443	# for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
	444
[4147]	445	set_namelist namelist_top_cfg ln_trcdta .false.
[12428]	446	set_namelist namelist_top_cfg ln_trcbc .false.
	447	# put ln_ironsed, ln_hydrofe to false
[3520]	448	# if not you need input files, and for tests is not necessary
[4147]	449	set_namelist namelist_pisces_cfg ln_varpar .false.
	450	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	451	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	452	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	453	# put ln_pisdmp to false : no restoring to global mean value
[4147]	454	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	455	if [ ${USING_MPMD} == "yes" ] ; then
	456	set_xio_using_server iodef.xml true
	457	else
	458	set_xio_using_server iodef.xml false
	459	fi
[3520]	460	cd ${SETTE_DIR}
[10755]	461	. ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	462	cd ${SETTE_DIR}
[3532]	463	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	464
	465	cd ${SETTE_DIR}
[7646]	466	export TEST_NAME="REPRO_8_4"
[4252]	467	. ./prepare_exe_dir.sh
[10755]	468	set_valid_dir
[10698]	469	clean_valid_dir
[3680]	470	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	471	NPROC=32
[4245]	472	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	473	cd ${EXE_DIR}
[9019]	474	set_namelist namelist_cfg cn_exp \"O2L3P_84\"
[4147]	475	set_namelist namelist_cfg nn_it000 1
[10750]	476	set_namelist namelist_cfg nn_itend 992
[7646]	477	set_namelist namelist_cfg jpni 8
	478	set_namelist namelist_cfg jpnj 4
[10573]	479	set_namelist namelist_cfg sn_cfctl%l_config .true.
	480	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	481	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[10189]	482	set_namelist namelist_cfg ln_wave .true.
	483	set_namelist namelist_cfg ln_cdgw .true.
	484	set_namelist namelist_cfg ln_sdw .true.
	485	set_namelist namelist_cfg nn_sdrift 1
	486	set_namelist namelist_cfg ln_stcor .true.
	487	set_namelist namelist_cfg ln_tauwoc .true.
[10687]	488
[9904]	489	if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10687]	490	# for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
	491
[4147]	492	set_namelist namelist_top_cfg ln_trcdta .false.
[12428]	493	set_namelist namelist_top_cfg ln_trcbc .false.
	494	# put ln_ironsed, ln_hydrofe to false
[3520]	495	# if not you need input files, and for tests is not necessary
[4147]	496	set_namelist namelist_pisces_cfg ln_varpar .false.
	497	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	498	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	499	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	500	# put ln_pisdmp to false : no restoring to global mean value
[4147]	501	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	502	if [ ${USING_MPMD} == "yes" ] ; then
	503	set_xio_using_server iodef.xml true
	504	else
	505	set_xio_using_server iodef.xml false
	506	fi
[3520]	507	cd ${SETTE_DIR}
[10755]	508	. ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	509	cd ${SETTE_DIR}
	510	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	511	fi
	512
[9518]	513	# ----------------
	514	# ORCA2_OFF_PISCES
	515	# ----------------
[10747]	516	if [ ${config} == "ORCA2_OFF_PISCES" ] ; then
[9518]	517	## Restartability tests for ORCA2_OFF_PISCES
[3520]	518	export TEST_NAME="LONG"
[9658]	519	cd ${MAIN_DIR}
[11497]	520	. ./makenemo -m ${CMP_NAM} -n ORCA2_OFF_PISCES_ST -r ORCA2_OFF_PISCES -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[3520]	521	cd ${SETTE_DIR}
[4252]	522	. ./param.cfg
	523	. ./all_functions.sh
	524	. ./prepare_exe_dir.sh
[10755]	525	set_valid_dir
[10698]	526	clean_valid_dir
[3520]	527	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	528	NPROC=32
[4245]	529	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	530	cd ${EXE_DIR}
[4147]	531	set_namelist namelist_cfg cn_exp \"OFFP_LONG\"
	532	set_namelist namelist_cfg nn_it000 1
[9560]	533	set_namelist namelist_cfg nn_itend 380
	534	set_namelist namelist_cfg nn_stock 190
[7646]	535	set_namelist namelist_cfg jpni 4
	536	set_namelist namelist_cfg jpnj 8
[10573]	537	set_namelist namelist_cfg sn_cfctl%l_config .true.
	538	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	539	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]	540	set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]	541	set_namelist namelist_top_cfg ln_trcdta .false.
[12428]	542	set_namelist namelist_top_cfg ln_trcbc .false.
	543	# put ln_ironsed, ln_hydrofe to false
[3520]	544	# if not you need input files, and for tests is not necessary
[4147]	545	set_namelist namelist_pisces_cfg ln_varpar .false.
	546	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	547	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	548	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	549	# put ln_pisdmp to false : no restoring to global mean value
[4147]	550	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	551	if [ ${USING_MPMD} == "yes" ] ; then
	552	set_xio_using_server iodef.xml true
	553	else
	554	set_xio_using_server iodef.xml false
	555	fi
[3520]	556	cd ${SETTE_DIR}
[10755]	557	. ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	558
	559	cd ${SETTE_DIR}
	560	export TEST_NAME="SHORT"
[4252]	561	. ./prepare_exe_dir.sh
[10755]	562	set_valid_dir
[10698]	563	clean_valid_dir
[3520]	564	cd ${EXE_DIR}
[4147]	565	set_namelist namelist_cfg cn_exp \"OFFP_SHORT\"
[9560]	566	set_namelist namelist_cfg nn_it000 191
	567	set_namelist namelist_cfg nn_itend 380
	568	set_namelist namelist_cfg nn_stock 190
[7646]	569	set_namelist namelist_cfg jpni 4
	570	set_namelist namelist_cfg jpnj 8
[10573]	571	set_namelist namelist_cfg sn_cfctl%l_config .true.
	572	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	573	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]	574	set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]	575	set_namelist namelist_top_cfg ln_rsttr .true.
	576	set_namelist namelist_top_cfg nn_rsttr 2
[9560]	577	set_namelist namelist_top_cfg cn_trcrst_in \"OFFP_LONG_00000190_restart_trc\"
[3537]	578	for (( i=1; i<=$NPROC; i++)) ; do
	579	L_NPROC=$(( $i - 1 ))
	580	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9560]	581	ln -sf ../LONG/OFFP_LONG_00000190_restart_trc_${L_NPROC}.nc .
[3537]	582	done
[12428]	583	set_namelist namelist_top_cfg ln_trcbc .false.
	584	# put ln_ironsed, ln_hydrofe to false
[3520]	585	# if not you need input files, and for tests is not necessary
[4147]	586	set_namelist namelist_pisces_cfg ln_varpar .false.
	587	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	588	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	589	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	590	# put ln_pisdmp to false : no restoring to global mean value
[4147]	591	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	592	if [ ${USING_MPMD} == "yes" ] ; then
	593	set_xio_using_server iodef.xml true
	594	else
	595	set_xio_using_server iodef.xml false
	596	fi
[3520]	597	cd ${SETTE_DIR}
[10755]	598	. ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	599	cd ${SETTE_DIR}
	600	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	601
[9518]	602	## Reproducibility tests for ORCA2_OFF_PISCES
[7646]	603	export TEST_NAME="REPRO_4_8"
[9658]	604	cd ${MAIN_DIR}
[3520]	605	cd ${SETTE_DIR}
[4252]	606	. ./param.cfg
	607	. ./all_functions.sh
	608	. ./prepare_exe_dir.sh
[10755]	609	set_valid_dir
[10698]	610	clean_valid_dir
[3520]	611	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	612	NPROC=32
[4245]	613	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	614	cd ${EXE_DIR}
[9019]	615	set_namelist namelist_cfg cn_exp \"OFFP_48\"
[4147]	616	set_namelist namelist_cfg nn_it000 1
[9560]	617	set_namelist namelist_cfg nn_itend 380
[4147]	618	set_namelist namelist_cfg jpni 4
[7646]	619	set_namelist namelist_cfg jpnj 8
[10573]	620	set_namelist namelist_cfg sn_cfctl%l_config .true.
	621	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	622	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]	623	set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]	624	set_namelist namelist_top_cfg ln_trcdta .false.
[12428]	625	set_namelist namelist_top_cfg ln_trcbc .false.
	626	# put ln_ironsed, ln_hydrofe to false
[3520]	627	# if not you need input files, and for tests is not necessary
[4147]	628	set_namelist namelist_pisces_cfg ln_varpar .false.
	629	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	630	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	631	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	632	# put ln_pisdmp to false : no restoring to global mean value
[4147]	633	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	634	if [ ${USING_MPMD} == "yes" ] ; then
	635	set_xio_using_server iodef.xml true
	636	else
	637	set_xio_using_server iodef.xml false
	638	fi
[3520]	639	cd ${SETTE_DIR}
[10755]	640	. ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	641	cd ${SETTE_DIR}
[3532]	642	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	643
	644	cd ${SETTE_DIR}
[7646]	645	export TEST_NAME="REPRO_8_4"
[4252]	646	. ./prepare_exe_dir.sh
[10755]	647	set_valid_dir
[10698]	648	clean_valid_dir
[3680]	649	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	650	NPROC=32
[4245]	651	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	652	cd ${EXE_DIR}
[9019]	653	set_namelist namelist_cfg cn_exp \"OFFP_84\"
[4147]	654	set_namelist namelist_cfg nn_it000 1
[9560]	655	set_namelist namelist_cfg nn_itend 380
[7646]	656	set_namelist namelist_cfg jpni 8
	657	set_namelist namelist_cfg jpnj 4
[10573]	658	set_namelist namelist_cfg sn_cfctl%l_config .true.
	659	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	660	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]	661	set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]	662	set_namelist namelist_top_cfg ln_trcdta .false.
[12428]	663	set_namelist namelist_top_cfg ln_trcbc .false.
	664	# put ln_ironsed, ln_hydrofe to false
[3520]	665	# if not you need input files, and for tests is not necessary
[4147]	666	set_namelist namelist_pisces_cfg ln_varpar .false.
	667	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	668	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	669	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	670	# put ln_pisdmp to false : no restoring to global mean value
[4147]	671	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	672	if [ ${USING_MPMD} == "yes" ] ; then
	673	set_xio_using_server iodef.xml true
	674	else
	675	set_xio_using_server iodef.xml false
	676	fi
[3520]	677	cd ${SETTE_DIR}
[10755]	678	. ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	679	cd ${SETTE_DIR}
	680	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	681	fi
	682
[9518]	683	# -----
	684	# AMM12
	685	# -----
[10747]	686	if [ ${config} == "AMM12" ] ; then
[3532]	687	## Restartability tests for AMM12
	688	export TEST_NAME="LONG"
[9658]	689	cd ${MAIN_DIR}
[11497]	690	. ./makenemo -m ${CMP_NAM} -n AMM12_ST -r AMM12 -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[3520]	691	cd ${SETTE_DIR}
[4252]	692	. ./param.cfg
	693	. ./all_functions.sh
	694	. ./prepare_exe_dir.sh
[10755]	695	set_valid_dir
[10698]	696	clean_valid_dir
[3520]	697	JOB_FILE=${EXE_DIR}/run_job.sh
	698	NPROC=32
[4245]	699	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	700	cd ${EXE_DIR}
[9019]	701	set_namelist namelist_cfg cn_exp \"AMM12_LONG\"
[4147]	702	set_namelist namelist_cfg nn_it000 1
[4252]	703	set_namelist namelist_cfg nn_itend 576
	704	set_namelist namelist_cfg nn_stock 288
[7646]	705	set_namelist namelist_cfg jpni 4
	706	set_namelist namelist_cfg jpnj 8
[10573]	707	set_namelist namelist_cfg sn_cfctl%l_config .true.
	708	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4245]	709	if [ ${USING_MPMD} == "yes" ] ; then
	710	set_xio_using_server iodef.xml true
	711	else
	712	set_xio_using_server iodef.xml false
	713	fi
[3520]	714	cd ${SETTE_DIR}
[10755]	715	. ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	716
	717	cd ${SETTE_DIR}
[3532]	718	export TEST_NAME="SHORT"
[4379]	719	. ./prepare_exe_dir.sh
[10755]	720	set_valid_dir
[10698]	721	clean_valid_dir
[3520]	722	cd ${EXE_DIR}
[9019]	723	set_namelist namelist_cfg cn_exp \"AMM12_SHORT\"
[4252]	724	set_namelist namelist_cfg nn_it000 289
	725	set_namelist namelist_cfg nn_itend 576
[7646]	726	set_namelist namelist_cfg jpni 4
	727	set_namelist namelist_cfg jpnj 8
[10573]	728	set_namelist namelist_cfg sn_cfctl%l_config .true.
	729	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4147]	730	set_namelist namelist_cfg ln_rstart .true.
	731	set_namelist namelist_cfg nn_rstctl 2
[9019]	732	set_namelist namelist_cfg cn_ocerst_in \"AMM12_LONG_00000288_restart\"
[4252]	733	set_namelist namelist_cfg nn_date0 20120102
[3537]	734	for (( i=1; i<=$NPROC; i++)) ; do
	735	L_NPROC=$(( $i - 1 ))
	736	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9019]	737	ln -sf ../LONG/AMM12_LONG_00000288_restart_${L_NPROC}.nc .
[3537]	738	done
[4245]	739	if [ ${USING_MPMD} == "yes" ] ; then
	740	set_xio_using_server iodef.xml true
	741	else
	742	set_xio_using_server iodef.xml false
	743	fi
[3520]	744	cd ${SETTE_DIR}
[10755]	745	. ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	746	cd ${SETTE_DIR}
[3532]	747	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	748
[3680]	749	## Reproducibility tests for AMM12
	750	export TEST_NAME="REPRO_8_4"
[9658]	751	cd ${MAIN_DIR}
[3520]	752	cd ${SETTE_DIR}
[4252]	753	. ./param.cfg
	754	. ./all_functions.sh
	755	. ./prepare_exe_dir.sh
[10755]	756	set_valid_dir
[10698]	757	clean_valid_dir
[3520]	758	JOB_FILE=${EXE_DIR}/run_job.sh
	759	NPROC=32
[4245]	760	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	761	cd ${EXE_DIR}
[9019]	762	set_namelist namelist_cfg cn_exp \"AMM12_84\"
[4147]	763	set_namelist namelist_cfg nn_it000 1
	764	set_namelist namelist_cfg nn_itend 576
	765	set_namelist namelist_cfg jpni 8
	766	set_namelist namelist_cfg jpnj 4
[10573]	767	set_namelist namelist_cfg sn_cfctl%l_config .true.
	768	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4245]	769	if [ ${USING_MPMD} == "yes" ] ; then
	770	set_xio_using_server iodef.xml true
	771	else
	772	set_xio_using_server iodef.xml false
	773	fi
[3520]	774	cd ${SETTE_DIR}
[10755]	775	. ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	776	cd ${SETTE_DIR}
	777	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	778
	779	cd ${SETTE_DIR}
[3680]	780	export TEST_NAME="REPRO_4_8"
[4252]	781	. ./prepare_exe_dir.sh
[10755]	782	set_valid_dir
[10698]	783	clean_valid_dir
[5478]	784	JOB_FILE=${EXE_DIR}/run_job.sh
	785	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	786	cd ${EXE_DIR}
[9019]	787	set_namelist namelist_cfg cn_exp \"AMM12_48\"
[4147]	788	set_namelist namelist_cfg nn_it000 1
	789	set_namelist namelist_cfg nn_itend 576
	790	set_namelist namelist_cfg jpni 4
	791	set_namelist namelist_cfg jpnj 8
[10573]	792	set_namelist namelist_cfg sn_cfctl%l_config .true.
	793	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4245]	794	if [ ${USING_MPMD} == "yes" ] ; then
	795	set_xio_using_server iodef.xml true
	796	else
	797	set_xio_using_server iodef.xml false
	798	fi
[3520]	799	cd ${SETTE_DIR}
[10755]	800	. ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	801	cd ${SETTE_DIR}
[3532]	802	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	803	fi
	804
	805
[9518]	806	# ---------
	807	# ORCA2_SAS
	808	# ---------
[10747]	809	if [ ${config} == "SAS" ] ; then
[9518]	810	## Restartability tests
[4147]	811	export TEST_NAME="LONG"
[9658]	812	cd ${MAIN_DIR}
[11497]	813	. ./makenemo -m ${CMP_NAM} -n ORCA2_SAS_ICE_ST -r ORCA2_SAS_ICE -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[4147]	814	cd ${SETTE_DIR}
[4252]	815	. ./param.cfg
	816	. ./all_functions.sh
	817	. ./prepare_exe_dir.sh
[10755]	818	set_valid_dir
[10698]	819	clean_valid_dir
[4147]	820	JOB_FILE=${EXE_DIR}/run_job.sh
	821	NPROC=32
[7646]	822	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]	823	cd ${EXE_DIR}
	824	set_namelist namelist_cfg cn_exp \"SAS\"
	825	set_namelist namelist_cfg nn_it000 1
[10750]	826	set_namelist namelist_cfg nn_itend 256
	827	set_namelist namelist_cfg nn_stock 128
[7646]	828	set_namelist namelist_cfg jpni 4
	829	set_namelist namelist_cfg jpnj 8
[10573]	830	set_namelist namelist_cfg sn_cfctl%l_config .true.
	831	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9019]	832	set_namelist namelist_ice_cfg ln_icediachk .true.
[4245]	833	if [ ${USING_MPMD} == "yes" ] ; then
	834	set_xio_using_server iodef.xml true
	835	else
	836	set_xio_using_server iodef.xml false
	837	fi
[4147]	838	cd ${SETTE_DIR}
[10755]	839	. ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4147]	840
	841	cd ${SETTE_DIR}
	842	export TEST_NAME="SHORT"
[4252]	843	. ./prepare_exe_dir.sh
[10755]	844	set_valid_dir
[10698]	845	clean_valid_dir
[4147]	846	cd ${EXE_DIR}
	847	set_namelist namelist_cfg cn_exp \"SAS\"
[10750]	848	set_namelist namelist_cfg nn_it000 129
	849	set_namelist namelist_cfg nn_itend 256
[7646]	850	set_namelist namelist_cfg jpni 4
	851	set_namelist namelist_cfg jpnj 8
[10573]	852	set_namelist namelist_cfg sn_cfctl%l_config .true.
	853	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[7646]	854	set_namelist namelist_cfg ln_rstart .true.
[4147]	855	set_namelist namelist_cfg nn_rstctl 2
[9019]	856	set_namelist namelist_cfg nn_date0 010109
[10750]	857	set_namelist namelist_cfg cn_ocerst_in \"SAS_00000128_restart\"
	858	set_namelist namelist_ice_cfg cn_icerst_in \"SAS_00000128_restart_ice\"
[4245]	859	if [ ${USING_MPMD} == "yes" ] ; then
	860	set_xio_using_server iodef.xml true
	861	else
	862	set_xio_using_server iodef.xml false
	863	fi
[7646]	864	for (( i=1; i<=$NPROC; i++)) ; do
	865	L_NPROC=$(( $i - 1 ))
	866	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[10750]	867	ln -sf ../LONG/SAS_00000128_restart_${L_NPROC}.nc .
	868	ln -sf ../LONG/SAS_00000128_restart_ice_${L_NPROC}.nc .
[7646]	869	done
[4147]	870	cd ${SETTE_DIR}
[10755]	871	. ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4147]	872	cd ${SETTE_DIR}
	873	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	874
[9518]	875	## Reproducibility tests
	876	export TEST_NAME="REPRO_4_8"
[9658]	877	cd ${MAIN_DIR}
[4990]	878	cd ${SETTE_DIR}
	879	. ./param.cfg
	880	. ./all_functions.sh
	881	. ./prepare_exe_dir.sh
[10755]	882	set_valid_dir
[10698]	883	clean_valid_dir
[4990]	884	JOB_FILE=${EXE_DIR}/run_job.sh
[9518]	885	NPROC=32
[4990]	886	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	887	cd ${EXE_DIR}
[9518]	888	set_namelist namelist_cfg cn_exp \"SAS_48\"
[4990]	889	set_namelist namelist_cfg nn_it000 1
[10750]	890	set_namelist namelist_cfg nn_itend 80
[9518]	891	set_namelist namelist_cfg jpni 4
	892	set_namelist namelist_cfg jpnj 8
[10573]	893	set_namelist namelist_cfg sn_cfctl%l_config .true.
	894	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4990]	895	if [ ${USING_MPMD} == "yes" ] ; then
	896	set_xio_using_server iodef.xml true
	897	else
	898	set_xio_using_server iodef.xml false
	899	fi
	900	cd ${SETTE_DIR}
[10755]	901	. ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]	902	cd ${SETTE_DIR}
	903	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[9019]	904
[4990]	905	cd ${SETTE_DIR}
[7646]	906	export TEST_NAME="REPRO_8_4"
[4990]	907	. ./prepare_exe_dir.sh
[10755]	908	set_valid_dir
[10698]	909	clean_valid_dir
[4990]	910	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	911	NPROC=32
[4990]	912	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	913	cd ${EXE_DIR}
[9518]	914	set_namelist namelist_cfg cn_exp \"SAS_84\"
[4990]	915	set_namelist namelist_cfg nn_it000 1
[10750]	916	set_namelist namelist_cfg nn_itend 80
[7646]	917	set_namelist namelist_cfg jpni 8
	918	set_namelist namelist_cfg jpnj 4
[10573]	919	set_namelist namelist_cfg sn_cfctl%l_config .true.
	920	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4990]	921	if [ ${USING_MPMD} == "yes" ] ; then
	922	set_xio_using_server iodef.xml true
	923	else
	924	set_xio_using_server iodef.xml false
	925	fi
	926	cd ${SETTE_DIR}
[10755]	927	. ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]	928	cd ${SETTE_DIR}
	929	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	930
	931	fi
	932
[9518]	933
	934	# --------------
[9663]	935	# ORCA2_ICE_OBS
[9518]	936	# --------------
[4990]	937	## Test assimilation interface code, OBS and ASM for reproducibility
	938	## Restartability not tested (ASM code not restartable while increments are being applied)
[10747]	939	if [ ${config} == "ORCA2_ICE_OBS" ] ; then
[9518]	940	## Reproducibility tests
[7646]	941	export TEST_NAME="REPRO_4_8"
[9658]	942	cd ${MAIN_DIR}
[10687]	943	. ./makenemo -m ${CMP_NAM} -n ORCA2_ICE_OBS_ST -r ORCA2_ICE_PISCES -d "OCE ICE" -j 8 add_key "key_asminc ${ADD_KEYS}" del_key "key_top"
[4990]	944	cd ${SETTE_DIR}
	945	. ./param.cfg
	946	. ./all_functions.sh
	947	. ./prepare_exe_dir.sh
[10755]	948	set_valid_dir
[10698]	949	clean_valid_dir
[4990]	950	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	951	NPROC=32
[4990]	952	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	953	cd ${EXE_DIR}
[9019]	954	set_namelist namelist_cfg cn_exp \"O2L3OBS_48\"
[4990]	955	set_namelist namelist_cfg nn_it000 1
[10750]	956	set_namelist namelist_cfg nn_itend 80
[7646]	957	set_namelist namelist_cfg ln_read_cfg .true.
[4990]	958	set_namelist namelist_cfg jpni 4
[7646]	959	set_namelist namelist_cfg jpnj 8
[10573]	960	set_namelist namelist_cfg sn_cfctl%l_config .true.
	961	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	962	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[6140]	963	set_namelist namelist_cfg ln_diaobs .true.
[4990]	964	set_namelist namelist_cfg ln_t3d .true.
	965	set_namelist namelist_cfg ln_s3d .true.
	966	set_namelist namelist_cfg ln_sst .true.
	967	set_namelist namelist_cfg ln_sla .true.
[6140]	968	set_namelist namelist_cfg ln_sic .true.
	969	set_namelist namelist_cfg ln_vel3d .true.
[4990]	970	set_namelist namelist_cfg ln_bkgwri .true.
	971	set_namelist namelist_cfg ln_trainc .true.
	972	set_namelist namelist_cfg ln_dyninc .true.
	973	set_namelist namelist_cfg ln_sshinc .true.
	974	set_namelist namelist_cfg ln_asmiau .true.
[9663]	975	#remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration)
[7722]	976	set_namelist namelist_top_cfg ln_trcdta .false.
[12428]	977	set_namelist namelist_top_cfg ln_trcbc .false.
[7722]	978	# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
	979	# if not you need input files, and for tests is not necessary
	980	set_namelist namelist_pisces_cfg ln_varpar .false.
	981	set_namelist namelist_pisces_cfg ln_ironsed .false.
	982	set_namelist namelist_pisces_cfg ln_ironice .false.
	983	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4990]	984	if [ ${USING_MPMD} == "yes" ] ; then
	985	set_xio_using_server iodef.xml true
	986	else
	987	set_xio_using_server iodef.xml false
	988	fi
	989	cd ${SETTE_DIR}
[10755]	990	. ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]	991	cd ${SETTE_DIR}
	992	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	993
	994	cd ${SETTE_DIR}
[7646]	995	export TEST_NAME="REPRO_8_4"
[4990]	996	. ./prepare_exe_dir.sh
[10755]	997	set_valid_dir
[10698]	998	clean_valid_dir
[4990]	999	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	1000	NPROC=32
[4990]	1001	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1002	cd ${EXE_DIR}
[9019]	1003	set_namelist namelist_cfg cn_exp \"O2L3OBS_84\"
[4990]	1004	set_namelist namelist_cfg nn_it000 1
[10750]	1005	set_namelist namelist_cfg nn_itend 80
[7646]	1006	set_namelist namelist_cfg ln_read_cfg .true.
	1007	set_namelist namelist_cfg jpni 8
	1008	set_namelist namelist_cfg jpnj 4
[10573]	1009	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1010	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	1011	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[6140]	1012	set_namelist namelist_cfg ln_diaobs .true.
[4990]	1013	set_namelist namelist_cfg ln_t3d .true.
	1014	set_namelist namelist_cfg ln_s3d .true.
	1015	set_namelist namelist_cfg ln_sst .true.
	1016	set_namelist namelist_cfg ln_sla .true.
[6140]	1017	set_namelist namelist_cfg ln_sic .true.
	1018	set_namelist namelist_cfg ln_vel3d .true.
[4990]	1019	set_namelist namelist_cfg ln_bkgwri .true.
	1020	set_namelist namelist_cfg ln_trainc .true.
	1021	set_namelist namelist_cfg ln_dyninc .true.
	1022	set_namelist namelist_cfg ln_sshinc .true.
	1023	set_namelist namelist_cfg ln_asmiau .true.
[9663]	1024	#remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration)
[7722]	1025	set_namelist namelist_top_cfg ln_trcdta .false.
[12428]	1026	set_namelist namelist_top_cfg ln_trcbc .false.
[7722]	1027	# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
	1028	# if not you need input files, and for tests is not necessary
	1029	set_namelist namelist_pisces_cfg ln_varpar .false.
	1030	set_namelist namelist_pisces_cfg ln_ironsed .false.
	1031	set_namelist namelist_pisces_cfg ln_ironice .false.
	1032	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4990]	1033	if [ ${USING_MPMD} == "yes" ] ; then
	1034	set_xio_using_server iodef.xml true
	1035	else
	1036	set_xio_using_server iodef.xml false
	1037	fi
	1038	cd ${SETTE_DIR}
[10755]	1039	. ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]	1040	cd ${SETTE_DIR}
	1041	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1042	fi
[5589]	1043
[9483]	1044	# ------------
[9663]	1045	# AGRIF ICE
[9483]	1046	# -----------
[10747]	1047	if [ ${config} == "AGRIF" ] ; then
[9518]	1048	## Restartability tests
[9483]	1049	export TEST_NAME="LONG"
[9658]	1050	cd ${MAIN_DIR}
[11497]	1051	. ./makenemo -m ${CMP_NAM} -n AGRIF_DEMO_ST -r AGRIF_DEMO -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9483]	1052	cd ${SETTE_DIR}
	1053	. ./param.cfg
	1054	. ./all_functions.sh
	1055	. ./prepare_exe_dir.sh
[10755]	1056	set_valid_dir
[10698]	1057	clean_valid_dir
[9483]	1058	JOB_FILE=${EXE_DIR}/run_job.sh
[9776]	1059	NPROC=16
[9483]	1060	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1061	cd ${EXE_DIR}
	1062	set_namelist namelist_cfg cn_exp \"AGRIF_LONG\"
	1063	set_namelist namelist_cfg nn_it000 1
	1064	set_namelist namelist_cfg nn_itend 20
	1065	set_namelist namelist_cfg nn_stock 10
[10573]	1066	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1067	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1068	set_namelist 1_namelist_cfg cn_exp \"AGRIF_LONG\"
	1069	set_namelist 1_namelist_cfg nn_it000 1
[9776]	1070	set_namelist 1_namelist_cfg nn_itend 20
	1071	set_namelist 1_namelist_cfg nn_stock 10
[10573]	1072	set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
	1073	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1074	set_namelist 2_namelist_cfg cn_exp \"AGRIF_LONG\"
	1075	set_namelist 2_namelist_cfg nn_it000 1
[9776]	1076	set_namelist 2_namelist_cfg nn_itend 80
	1077	set_namelist 2_namelist_cfg nn_stock 40
[10573]	1078	set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
	1079	set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[9776]	1080	set_namelist 3_namelist_cfg cn_exp \"AGRIF_LONG\"
	1081	set_namelist 3_namelist_cfg nn_it000 1
	1082	set_namelist 3_namelist_cfg nn_itend 240
	1083	set_namelist 3_namelist_cfg nn_stock 120
[10573]	1084	set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
	1085	set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9507]	1086
[9483]	1087	if [ ${USING_MPMD} == "yes" ] ; then
	1088	set_xio_using_server iodef.xml true
	1089	else
	1090	set_xio_using_server iodef.xml false
	1091	fi
	1092	cd ${SETTE_DIR}
[10755]	1093	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1094
	1095	cd ${SETTE_DIR}
	1096	export TEST_NAME="SHORT"
	1097	. ./prepare_exe_dir.sh
[10755]	1098	set_valid_dir
[10698]	1099	clean_valid_dir
[9483]	1100	cd ${EXE_DIR}
	1101	set_namelist namelist_cfg cn_exp \"AGRIF_SHORT\"
	1102	set_namelist namelist_cfg nn_it000 11
	1103	set_namelist namelist_cfg nn_itend 20
	1104	set_namelist namelist_cfg nn_stock 10
[10573]	1105	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1106	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1107	set_namelist namelist_cfg ln_rstart .true.
	1108	set_namelist namelist_cfg nn_rstctl 2
	1109	set_namelist 1_namelist_cfg cn_exp \"AGRIF_SHORT\"
[9776]	1110	set_namelist 1_namelist_cfg nn_it000 11
	1111	set_namelist 1_namelist_cfg nn_itend 20
	1112	set_namelist 1_namelist_cfg nn_stock 10
[10573]	1113	set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
	1114	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1115	set_namelist 1_namelist_cfg ln_rstart .true.
	1116	set_namelist 1_namelist_cfg nn_rstctl 2
	1117	set_namelist 2_namelist_cfg cn_exp \"AGRIF_SHORT\"
[9776]	1118	set_namelist 2_namelist_cfg nn_it000 41
	1119	set_namelist 2_namelist_cfg nn_itend 80
	1120	set_namelist 2_namelist_cfg nn_stock 40
[10573]	1121	set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
	1122	set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1123	set_namelist 2_namelist_cfg ln_rstart .true.
	1124	set_namelist 2_namelist_cfg nn_rstctl 2
[9776]	1125	set_namelist 3_namelist_cfg cn_exp \"AGRIF_SHORT\"
	1126	set_namelist 3_namelist_cfg nn_it000 121
	1127	set_namelist 3_namelist_cfg nn_itend 240
	1128	set_namelist 3_namelist_cfg nn_stock 120
[10573]	1129	set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
	1130	set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9776]	1131	set_namelist 3_namelist_cfg ln_rstart .true.
	1132	set_namelist 3_namelist_cfg nn_rstctl 2
[9483]	1133	set_namelist namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000010_restart\"
	1134	set_namelist namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000010_restart_ice\"
[9776]	1135	set_namelist 1_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000010_restart\"
	1136	set_namelist 1_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000010_restart_ice\"
	1137	set_namelist 2_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000040_restart\"
	1138	set_namelist 2_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000040_restart_ice\"
	1139	set_namelist 3_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000120_restart\"
	1140	set_namelist 3_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000120_restart_ice\"
[9483]	1141
	1142	for (( i=1; i<=$NPROC; i++)) ; do
	1143	L_NPROC=$(( $i - 1 ))
	1144	L_NPROC=`printf "%04d\n" ${L_NPROC}`
	1145	ln -sf ../LONG/AGRIF_LONG_00000010_restart_${L_NPROC}.nc .
	1146	ln -sf ../LONG/AGRIF_LONG_00000010_restart_ice_${L_NPROC}.nc .
[9776]	1147	ln -sf ../LONG/1_AGRIF_LONG_00000010_restart_${L_NPROC}.nc .
	1148	ln -sf ../LONG/1_AGRIF_LONG_00000010_restart_ice_${L_NPROC}.nc .
	1149	ln -sf ../LONG/2_AGRIF_LONG_00000040_restart_${L_NPROC}.nc .
	1150	ln -sf ../LONG/2_AGRIF_LONG_00000040_restart_ice_${L_NPROC}.nc .
	1151	ln -sf ../LONG/3_AGRIF_LONG_00000120_restart_${L_NPROC}.nc .
	1152	ln -sf ../LONG/3_AGRIF_LONG_00000120_restart_ice_${L_NPROC}.nc .
[9483]	1153	done
	1154	if [ ${USING_MPMD} == "yes" ] ; then
	1155	set_xio_using_server iodef.xml true
	1156	else
	1157	set_xio_using_server iodef.xml false
	1158	fi
	1159	cd ${SETTE_DIR}
[10755]	1160	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1161	cd ${SETTE_DIR}
	1162	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1163
[9518]	1164	## Reproducibility tests
[11800]	1165	export TEST_NAME="REPRO_2_8"
[9658]	1166	cd ${MAIN_DIR}
[9483]	1167	cd ${SETTE_DIR}
	1168	. ./param.cfg
	1169	. ./all_functions.sh
	1170	. ./prepare_exe_dir.sh
[10755]	1171	set_valid_dir
[10698]	1172	clean_valid_dir
[9483]	1173	JOB_FILE=${EXE_DIR}/run_job.sh
[11800]	1174	NPROC=16
[9483]	1175	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1176	cd ${EXE_DIR}
[11800]	1177	set_namelist namelist_cfg cn_exp \"AGRIF_28\"
[9483]	1178	set_namelist namelist_cfg nn_it000 1
	1179	set_namelist namelist_cfg nn_itend 20
[11800]	1180	set_namelist namelist_cfg jpni 2
[9483]	1181	set_namelist namelist_cfg jpnj 8
[10573]	1182	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1183	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[11800]	1184	set_namelist 1_namelist_cfg cn_exp \"AGRIF_28\"
[9483]	1185	set_namelist 1_namelist_cfg nn_it000 1
[9776]	1186	set_namelist 1_namelist_cfg nn_itend 20
[11800]	1187	set_namelist 1_namelist_cfg jpni 2
[9483]	1188	set_namelist 1_namelist_cfg jpnj 8
[10573]	1189	set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
	1190	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[11800]	1191	set_namelist 2_namelist_cfg cn_exp \"AGRIF_28\"
[9483]	1192	set_namelist 2_namelist_cfg nn_it000 1
[9776]	1193	set_namelist 2_namelist_cfg nn_itend 80
[11800]	1194	set_namelist 2_namelist_cfg jpni 2
[9483]	1195	set_namelist 2_namelist_cfg jpnj 8
[10573]	1196	set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
	1197	set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[11800]	1198	set_namelist 3_namelist_cfg cn_exp \"AGRIF_28\"
[9776]	1199	set_namelist 3_namelist_cfg nn_it000 1
	1200	set_namelist 3_namelist_cfg nn_itend 240
[11800]	1201	set_namelist 3_namelist_cfg jpni 2
[9776]	1202	set_namelist 3_namelist_cfg jpnj 8
[10573]	1203	set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
	1204	set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1205
	1206	if [ ${USING_MPMD} == "yes" ] ; then
	1207	set_xio_using_server iodef.xml true
	1208	else
	1209	set_xio_using_server iodef.xml false
	1210	fi
	1211	cd ${SETTE_DIR}
[10755]	1212	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1213	cd ${SETTE_DIR}
	1214	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1215
	1216	cd ${SETTE_DIR}
[11800]	1217	export TEST_NAME="REPRO_4_4"
[9483]	1218	. ./prepare_exe_dir.sh
[10755]	1219	set_valid_dir
[10698]	1220	clean_valid_dir
[9483]	1221	JOB_FILE=${EXE_DIR}/run_job.sh
[11800]	1222	NPROC=16
[9483]	1223	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1224	cd ${EXE_DIR}
[11800]	1225	set_namelist namelist_cfg cn_exp \"AGRIF_44\"
[9483]	1226	set_namelist namelist_cfg nn_it000 1
	1227	set_namelist namelist_cfg nn_itend 20
[11800]	1228	set_namelist namelist_cfg jpni 4
[9483]	1229	set_namelist namelist_cfg jpnj 4
[10573]	1230	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1231	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[11800]	1232	set_namelist 1_namelist_cfg cn_exp \"AGRIF_44\"
[9483]	1233	set_namelist 1_namelist_cfg nn_it000 1
[9776]	1234	set_namelist 1_namelist_cfg nn_itend 20
[11800]	1235	set_namelist 1_namelist_cfg jpni 4
[9483]	1236	set_namelist 1_namelist_cfg jpnj 4
[10573]	1237	set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
	1238	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[11800]	1239	set_namelist 2_namelist_cfg cn_exp \"AGRIF_44\"
[9483]	1240	set_namelist 2_namelist_cfg nn_it000 1
[9776]	1241	set_namelist 2_namelist_cfg nn_itend 80
[11800]	1242	set_namelist 2_namelist_cfg jpni 4
[9483]	1243	set_namelist 2_namelist_cfg jpnj 4
[10573]	1244	set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
	1245	set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[12428]	1246	set_namelist 3_namelist_cfg cn_exp \"AGRIF_44\"
[9776]	1247	set_namelist 3_namelist_cfg nn_it000 1
	1248	set_namelist 3_namelist_cfg nn_itend 240
[11800]	1249	set_namelist 3_namelist_cfg jpni 4
[9776]	1250	set_namelist 3_namelist_cfg jpnj 4
[10573]	1251	set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
	1252	set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1253
	1254	if [ ${USING_MPMD} == "yes" ] ; then
	1255	set_xio_using_server iodef.xml true
	1256	else
	1257	set_xio_using_server iodef.xml false
	1258	fi
	1259	cd ${SETTE_DIR}
[10755]	1260	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1261	cd ${SETTE_DIR}
	1262	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1263
[9507]	1264	## test code corruption with AGRIF (phase 1) ==> Compile with key_agrif but run with no zoom
	1265	export TEST_NAME="ORCA2"
[9658]	1266	cd ${MAIN_DIR}
[9483]	1267	cd ${SETTE_DIR}
	1268	. ./param.cfg
	1269	. ./all_functions.sh
	1270	. ./prepare_exe_dir.sh
[10755]	1271	set_valid_dir
[10698]	1272	clean_valid_dir
[9483]	1273	JOB_FILE=${EXE_DIR}/run_job.sh
	1274	NPROC=32
	1275	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1276	cd ${EXE_DIR}
[9507]	1277	set_namelist namelist_cfg cn_exp \"ORCA2\"
[9483]	1278	set_namelist namelist_cfg nn_it000 1
	1279	set_namelist namelist_cfg nn_itend 150
[10573]	1280	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1281	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9507]	1282
[9483]	1283	# Set the number of fine grids to zero:
	1284	sed -i "1s/.*/0/" ${EXE_DIR}/AGRIF_FixedGrids.in
	1285
	1286	if [ ${USING_MPMD} == "yes" ] ; then
	1287	set_xio_using_server iodef.xml true
	1288	else
	1289	set_xio_using_server iodef.xml false
	1290	fi
	1291	cd ${SETTE_DIR}
[10755]	1292	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1293	cd ${SETTE_DIR}
	1294	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1295
	1296	fi
	1297
[9525]	1298
[9776]	1299	## test code corruption with AGRIF (phase 2) ==> Compile without key_agrif (to be compared with AGRIF_DEMO_ST/ORCA2)
[10747]	1300	if [ ${config} == "AGRIF" ] ; then
[9507]	1301	export TEST_NAME="ORCA2"
[9658]	1302	cd ${MAIN_DIR}
[11497]	1303	. ./makenemo -m ${CMP_NAM} -n AGRIF_DEMO_NOAGRIF_ST -r AGRIF_DEMO -j 8 add_key "${ADD_KEYS}" del_key "key_agrif"
[9483]	1304	cd ${SETTE_DIR}
	1305	. ./param.cfg
	1306	. ./all_functions.sh
	1307	. ./prepare_exe_dir.sh
[10755]	1308	set_valid_dir
[10698]	1309	clean_valid_dir
[9483]	1310	JOB_FILE=${EXE_DIR}/run_job.sh
	1311	NPROC=32
	1312	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1313	cd ${EXE_DIR}
[9507]	1314	set_namelist namelist_cfg cn_exp \"ORCA2\"
[9483]	1315	set_namelist namelist_cfg nn_it000 1
	1316	set_namelist namelist_cfg nn_itend 150
[10573]	1317	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1318	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1319	#
	1320	if [ ${USING_MPMD} == "yes" ] ; then
	1321	set_xio_using_server iodef.xml true
	1322	else
	1323	set_xio_using_server iodef.xml false
	1324	fi
	1325	cd ${SETTE_DIR}
[10755]	1326	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1327	cd ${SETTE_DIR}
	1328	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1329
	1330	fi
	1331
[9553]	1332	# -------
	1333	# SPITZ12
	1334	# -------
[10747]	1335	if [ ${config} == "SPITZ12" ] ; then
[9553]	1336	## Restartability tests
	1337	export TEST_NAME="LONG"
[9658]	1338	cd ${MAIN_DIR}
[11497]	1339	. ./makenemo -m ${CMP_NAM} -n SPITZ12_ST -r SPITZ12 -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9553]	1340	cd ${SETTE_DIR}
	1341	. ./param.cfg
	1342	. ./all_functions.sh
	1343	. ./prepare_exe_dir.sh
[10755]	1344	set_valid_dir
[10698]	1345	clean_valid_dir
[9553]	1346	JOB_FILE=${EXE_DIR}/run_job.sh
	1347	NPROC=32
	1348	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1349	cd ${EXE_DIR}
	1350	set_namelist namelist_cfg cn_exp \"S12_LONG\"
	1351	set_namelist namelist_cfg nn_it000 1
[9744]	1352	set_namelist namelist_cfg nn_itend 240
	1353	set_namelist namelist_cfg nn_stock 120
	1354	set_namelist namelist_cfg nn_date0 20020101
[9553]	1355	set_namelist namelist_cfg jpni 4
	1356	set_namelist namelist_cfg jpnj 8
[10573]	1357	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1358	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9744]	1359	#set_namelist namelist_ice_cfg ln_icediachk .true.
[9553]	1360	if [ ${USING_MPMD} == "yes" ] ; then
	1361	set_xio_using_server iodef.xml true
	1362	else
	1363	set_xio_using_server iodef.xml false
	1364	fi
	1365	cd ${SETTE_DIR}
[10755]	1366	. ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]	1367
	1368	cd ${SETTE_DIR}
	1369	export TEST_NAME="SHORT"
	1370	. ./prepare_exe_dir.sh
[10755]	1371	set_valid_dir
[10698]	1372	clean_valid_dir
[9553]	1373	cd ${EXE_DIR}
	1374	set_namelist namelist_cfg cn_exp \"S12_SHORT\"
[9744]	1375	set_namelist namelist_cfg nn_it000 121
	1376	set_namelist namelist_cfg nn_itend 240
	1377	set_namelist namelist_cfg nn_stock 120
[9553]	1378	set_namelist namelist_cfg ln_rstart .true.
	1379	set_namelist namelist_cfg nn_rstctl 2
	1380	set_namelist namelist_cfg jpni 4
	1381	set_namelist namelist_cfg jpnj 8
[10573]	1382	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1383	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9744]	1384	set_namelist namelist_cfg cn_ocerst_in \"S12_LONG_00000120_restart\"
	1385	set_namelist namelist_ice_cfg cn_icerst_in \"S12_LONG_00000120_restart_ice\"
[9553]	1386	for (( i=1; i<=$NPROC; i++)) ; do
	1387	L_NPROC=$(( $i - 1 ))
	1388	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9744]	1389	ln -sf ../LONG/S12_LONG_00000120_restart_${L_NPROC}.nc .
	1390	ln -sf ../LONG/S12_LONG_00000120_restart_ice_${L_NPROC}.nc .
[9553]	1391	done
	1392	if [ ${USING_MPMD} == "yes" ] ; then
	1393	set_xio_using_server iodef.xml true
	1394	else
	1395	set_xio_using_server iodef.xml false
	1396	fi
	1397	cd ${SETTE_DIR}
[10755]	1398	. ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]	1399	cd ${SETTE_DIR}
	1400	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1401
	1402	## Reproducibility tests
	1403	export TEST_NAME="REPRO_4_8"
[9658]	1404	cd ${MAIN_DIR}
[9553]	1405	cd ${SETTE_DIR}
	1406	. ./param.cfg
	1407	. ./all_functions.sh
	1408	. ./prepare_exe_dir.sh
[10755]	1409	set_valid_dir
[10698]	1410	clean_valid_dir
[9553]	1411	JOB_FILE=${EXE_DIR}/run_job.sh
	1412	NPROC=32
	1413	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1414	cd ${EXE_DIR}
	1415	set_namelist namelist_cfg cn_exp \"S12_48\"
	1416	set_namelist namelist_cfg nn_it000 1
[9744]	1417	set_namelist namelist_cfg nn_itend 120
	1418	set_namelist namelist_cfg nn_date0 20020101
[9553]	1419	set_namelist namelist_cfg jpni 4
	1420	set_namelist namelist_cfg jpnj 8
[10573]	1421	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1422	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9553]	1423	if [ ${USING_MPMD} == "yes" ] ; then
	1424	set_xio_using_server iodef.xml true
	1425	else
	1426	set_xio_using_server iodef.xml false
	1427	fi
	1428	cd ${SETTE_DIR}
[10755]	1429	. ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]	1430	cd ${SETTE_DIR}
	1431	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1432
	1433	cd ${SETTE_DIR}
	1434	export TEST_NAME="REPRO_8_4"
	1435	. ./prepare_exe_dir.sh
[10755]	1436	set_valid_dir
[10698]	1437	clean_valid_dir
[9553]	1438	JOB_FILE=${EXE_DIR}/run_job.sh
	1439	NPROC=32
	1440	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1441	cd ${EXE_DIR}
	1442	set_namelist namelist_cfg cn_exp \"S12_84\"
	1443	set_namelist namelist_cfg nn_it000 1
[9744]	1444	set_namelist namelist_cfg nn_itend 120
	1445	set_namelist namelist_cfg nn_date0 20020101
[9553]	1446	set_namelist namelist_cfg jpni 8
	1447	set_namelist namelist_cfg jpnj 4
[10573]	1448	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1449	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9553]	1450	if [ ${USING_MPMD} == "yes" ] ; then
	1451	set_xio_using_server iodef.xml true
	1452	else
	1453	set_xio_using_server iodef.xml false
	1454	fi
	1455	cd ${SETTE_DIR}
[10755]	1456	. ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]	1457	cd ${SETTE_DIR}
	1458	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1459	fi
	1460
	1461
[3520]	1462	done

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