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sette_reference-configurations.sh in utils/CI/sette – NEMO

source: utils/CI/sette/sette_reference-configurations.sh @ 12474

Last change on this file since 12474 was 12474, checked in by mathiot, 4 years ago

merge sette_ticket1927 to sette (ticket #1927)

  • Property svn:executable set to *
File size: 56.3 KB
RevLine 
[3520]1#!/bin/bash
[3708]2############################################################
[3520]3# Author : Simona Flavoni for NEMO
[4245]4# Contact: sflod@locean-ipsl.upmc.fr
5# 2013   : A.C. Coward added options for testing with XIOS in dettached mode
[3520]6#
7# sette.sh   : principal script of SET TEsts for NEMO (SETTE)
8# ----------------------------------------------------------------------
9# NEMO/SETTE , NEMO Consortium (2010)
10# Software governed by the CeCILL licence     (NEMOGCM/NEMO_CeCILL.txt)
11# ----------------------------------------------------------------------
12#
13#############################################################
[7744]14#set -vx
[3520]15set -o posix
16#set -u
17#set -e
[4245]18# ===========
[3520]19# DESCRIPTION
20# ===========
21#
22# Variables to be checked by user:
23#
[4245]24# COMPILER          : name of compiler as defined in NEMOGCM/ARCH directory
25# BATCH_COMMAND_PAR :  name of the command for submitting parallel batch jobs
26# BATCH_COMMAND_SEQ :  name of the command for submitting sequential batch jobs 
27# INTERACT_FLAG     : flag to run in interactive mode "yes"
28#                           to run in batch mode "no"
29# MPIRUN_FLAG       : flag to run in parallel (MPI) "yes"
30#                           to run in sequential mode (NB_PROC = 1) "no"
31# USING_XIOS        : flag to control the activation of key_iomput
32#                      "yes" to compile using key_iomput and link to the external XIOS library
33#                      "no"  to compile without key_iomput and link to the old IOIPSL library
34# USING_MPMD        : flag to control the use of stand-alone IO servers
35#                     requires USING_XIOS="yes"
36#                      "yes" to run in MPMD (detached) mode with stand-alone IO servers
37#                      "no"  to run in SPMD (attached) mode without separate IO servers
38# NUM_XIOSERVERS    : number of stand-alone IO servers to employ
39#                     set to zero if USING_MPMD="no"
[3520]40#
41# Principal script is sette.sh, that calls
42#
[4245]43#  makenemo  : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
[9576]44#              and links to nemo in ${CONFIG_NAME}/EXP00)
[3520]45#
46#  param.cfg : sets and loads following directories:
47#
[4245]48#   FORCING_DIR         : is the directory for forcing files (tarfile)
49#   INPUT_DIR           : is the directory for input files storing
50#   TMPDIR              : is the temporary directory (if needed)
[3520]51#   NEMO_VALIDATION_DIR : is the validation directory
52#
53#   (NOTE: this file is the same for all configrations to be tested with sette)
54#
[4245]55#   all_functions.sh : loads functions used by sette (note: new functions can be added here)
56#   set_namelist     : function declared in all_functions that sets namelist parameters
57#   post_test_tidyup : creates validation storage directory and copies required output files
[9019]58#                      (run.stat and ocean.output) in it after execution of test.
[3520]59#
[4245]60#  VALIDATION tree is:
[3520]61#
62#   NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
63#
64#  prepare_exe_dir.sh : defines and creates directory where the test is executed
[4245]65#                       execution directory takes name of TEST_NAME defined for every test
66#                       in sette.sh. (each test in executed in its own directory)
[3520]67#
[10755]68#  set_valid_dir       : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
69#
[10698]70#  clean_valid_dir    : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
71#                       ( not doing it could lead to false positive )
72#
[4245]73#  prepare_job.sh     : to generate the script run_job.sh
[3520]74#
[4245]75#  fcm_job.sh         : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
76#                        see sette.sh and BATCH_TEMPLATE directory
[3520]77#
[4245]78#  NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
79#        can be found paths to the input tar file)
80#  NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
81#        directory
82#  NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
83#        remain in ${NEW_CONF}/EXP00
[3520]84#
[4245]85#  NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
86#        executed commands
[3520]87#
[4245]88#  NOTE: if sette.sh is stopped in output.sette there is written the last command
89#        executed by sette.sh
[3520]90#
[4245]91# example use: ./sette.sh
92#########################################################################################
[3520]93#
[10687]94# LOAD param value
[10717]95SETTE_DIR=$(cd $(dirname "$0"); pwd)
96MAIN_DIR=$(dirname $SETTE_DIR)
[10687]97. ./param.cfg
[7743]98
[10687]99export BATCH_COMMAND_PAR=${BATCH_CMD}
100export BATCH_COMMAND_SEQ=${BATCH_CMD}
[4990]101export INTERACT_FLAG="no"
[4245]102export MPIRUN_FLAG="yes"
[9941]103export USING_ICEBERGS="yes"
[3520]104#
[4245]105export DEL_KEYS="key_iomput"
106if [ ${USING_XIOS} == "yes" ] 
107 then
108   export DEL_KEYS=""
109fi
[3520]110#
[10687]111export ADD_KEYS=""
112if [ ${ADD_NOSIGNEDZERO} == "yes" ]
113 then
114   export ADD_KEYS="key_nosignedzero"
115fi
116#
[4245]117# Settings which control the use of stand alone servers (only relevant if using xios)
[3520]118#
[10632]119export NUM_XIOSERVERS=4
[11140]120export JOB_PREFIX=${JOB_PREFIX_MPMD}
[3520]121#
[4245]122if [ ${USING_MPMD} == "no" ] 
123 then
124   export NUM_XIOSERVERS=0
[11140]125   export JOB_PREFIX=${JOB_PREFIX_NOMPMD}
[4245]126fi
[3520]127#
128#
[10573]129if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no" ]
[4245]130 then
131   echo "Incompatible choices. MPMD mode requires the XIOS server"
132   exit
133fi
[3520]134
135# Directory to run the tests
[9602]136CONFIG_DIR0=${MAIN_DIR}/cfgs
137TOOLS_DIR=${MAIN_DIR}/tools
[3520]138
139CMP_NAM=${1:-$COMPILER}
140# Copy job_batch_COMPILER file for specific compiler into job_batch_template
141cd ${SETTE_DIR}
[4245]142cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template || exit
[10747]143# Description of available configurations:
144# GYRE_PISCES       :
145# ORCA2_ICE_PISCES  :
146# ORCA2_OFF_PISCES  :
147# AMM12             :
148# SAS               :
149# ORCA2_ICE_OBS     :
150# AGRIF             : test AGRIF in a double zoom configuration in the nordic seas + 1 zoom in the eq. Pacific (AGRIF_DEMO)
151#                       and check that key_agrif without zoom = no key_agrif
152# SPITZ12           : regional configuration including sea-ice and tides (Spitzbergen)
[4147]153
[10747]154for config in ${TEST_CONFIGS}
[3520]155do
156
[9518]157# -----------
158# GYRE_PISCES
159# -----------
[10747]160if [ ${config} == "GYRE_PISCES" ] ;  then
[9518]161## Restartability tests for GYRE_PISCES
[3520]162    export TEST_NAME="LONG"
[9658]163    cd ${MAIN_DIR}
[11497]164    . ./makenemo -m ${CMP_NAM} -n GYRE_PISCES_ST -r GYRE_PISCES -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[3520]165    cd ${SETTE_DIR}
[4252]166    . ./param.cfg
167    . ./all_functions.sh
168    . ./prepare_exe_dir.sh
[10755]169    set_valid_dir
[10698]170    clean_valid_dir
[3520]171    JOB_FILE=${EXE_DIR}/run_job.sh
[9525]172    NPROC=8
[4245]173    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]174    cd ${EXE_DIR} 
[7715]175    set_namelist namelist_cfg cn_exp \"GYREPIS_LONG\"
[4147]176    set_namelist namelist_cfg nn_it000 1
[9560]177    set_namelist namelist_cfg nn_itend 1080
178    set_namelist namelist_cfg nn_stock  540
[7646]179    set_namelist namelist_cfg ln_linssh .true.
[9525]180    set_namelist namelist_cfg jpni 2
181    set_namelist namelist_cfg jpnj 4
[10573]182    set_namelist namelist_cfg sn_cfctl%l_config .true.
183    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
184    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[4245]185    if [ ${USING_MPMD} == "yes" ] ; then
186       set_xio_using_server iodef.xml true
187    else
188       set_xio_using_server iodef.xml false
189    fi
190    cd ${SETTE_DIR}
[10755]191    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]192
193    cd ${SETTE_DIR}
194    export TEST_NAME="SHORT"
[4252]195    . ./prepare_exe_dir.sh
[10755]196    set_valid_dir
[10698]197    clean_valid_dir
[3520]198    cd ${EXE_DIR}
[7715]199    set_namelist namelist_cfg cn_exp \"GYREPIS_SHORT\"
[9560]200    set_namelist namelist_cfg nn_it000 541
201    set_namelist namelist_cfg nn_itend 1080
202    set_namelist namelist_cfg nn_stock 540
[4147]203    set_namelist namelist_cfg ln_rstart .true.
204    set_namelist namelist_cfg nn_rstctl 2
[7646]205    set_namelist namelist_cfg ln_linssh .true.
[9525]206    set_namelist namelist_cfg jpni 2
207    set_namelist namelist_cfg jpnj 4
[10573]208    set_namelist namelist_cfg sn_cfctl%l_config .true.
209    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
210    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[7744]211    set_namelist namelist_top_cfg ln_rsttr .true.
212    set_namelist namelist_top_cfg nn_rsttr 2
[9560]213    set_namelist namelist_cfg cn_ocerst_in \"GYREPIS_LONG_00000540_restart\"
214    set_namelist namelist_top_cfg cn_trcrst_in \"GYREPIS_LONG_00000540_restart_trc\"
[4245]215    if [ ${USING_MPMD} == "yes" ] ; then
216       set_xio_using_server iodef.xml true
217    else
218       set_xio_using_server iodef.xml false
219    fi
[3537]220    for (( i=1; i<=$NPROC; i++)) ; do
221        L_NPROC=$(( $i - 1 ))
222        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9560]223        ln -sf ../LONG/GYREPIS_LONG_00000540_restart_${L_NPROC}.nc .
224        ln -sf ../LONG/GYREPIS_LONG_00000540_restart_trc_${L_NPROC}.nc .
[3537]225    done
[3520]226    cd ${SETTE_DIR}
[10755]227    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]228    cd ${SETTE_DIR}
[3532]229    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]230
[9518]231## Reproducibility tests for GYRE_PISCES
[9525]232    export TEST_NAME="REPRO_2_4"
[9658]233    cd ${MAIN_DIR}
[3520]234    cd ${SETTE_DIR}
[4252]235    . ./param.cfg
236    . ./all_functions.sh
237    . ./prepare_exe_dir.sh
[10755]238    set_valid_dir
[10698]239    clean_valid_dir
[3520]240    JOB_FILE=${EXE_DIR}/run_job.sh
[9525]241    NPROC=8
[4245]242    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]243    cd ${EXE_DIR}
[7715]244    set_namelist namelist_cfg cn_exp \"GYREPIS_48\"
[4147]245    set_namelist namelist_cfg nn_it000 1
[9560]246    set_namelist namelist_cfg nn_itend 1080
[7646]247    set_namelist namelist_cfg ln_linssh .true.
[9525]248    set_namelist namelist_cfg jpni 2
249    set_namelist namelist_cfg jpnj 4
[10573]250    set_namelist namelist_cfg sn_cfctl%l_config .true.
251    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
252    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[4245]253    if [ ${USING_MPMD} == "yes" ] ; then
254       set_xio_using_server iodef.xml true
255    else
256       set_xio_using_server iodef.xml false
257    fi
[3520]258    cd ${SETTE_DIR}
[10755]259    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]260    cd ${SETTE_DIR}
261    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
262
263    cd ${SETTE_DIR}
[9525]264    export TEST_NAME="REPRO_4_2"
[4252]265    . ./prepare_exe_dir.sh
[10755]266    set_valid_dir
[10698]267    clean_valid_dir
[3680]268    JOB_FILE=${EXE_DIR}/run_job.sh
[9525]269    NPROC=8
[4245]270    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]271    cd ${EXE_DIR}
[7715]272    set_namelist namelist_cfg cn_exp \"GYREPIS_84\"
[4147]273    set_namelist namelist_cfg nn_it000 1
[9560]274    set_namelist namelist_cfg nn_itend 1080
[7646]275    set_namelist namelist_cfg ln_linssh .true.
[9525]276    set_namelist namelist_cfg jpni 4
277    set_namelist namelist_cfg jpnj 2
[10573]278    set_namelist namelist_cfg sn_cfctl%l_config .true.
279    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
280    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[4245]281    if [ ${USING_MPMD} == "yes" ] ; then
282       set_xio_using_server iodef.xml true
283    else
284       set_xio_using_server iodef.xml false
285    fi
[3520]286    cd ${SETTE_DIR}
[10755]287    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]288    cd ${SETTE_DIR}
289    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3532]290
[3520]291fi
292
[9518]293# -----------------
[9663]294# ORCA2_ICE_PISCES
[9518]295# -----------------
[10747]296if [ ${config} == "ORCA2_ICE_PISCES" ] ;  then
[9663]297## Restartability tests for ORCA2_ICE_PISCES
[7646]298    export TEST_NAME="LONG"
[9658]299    cd ${MAIN_DIR}
[11497]300    . ./makenemo -m ${CMP_NAM} -n ORCA2_ICE_PISCES_ST -r ORCA2_ICE_PISCES -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[7646]301    cd ${SETTE_DIR}
302    . ./param.cfg
303    . ./all_functions.sh
304    . ./prepare_exe_dir.sh
[10755]305    set_valid_dir
[10698]306    clean_valid_dir
[7646]307    JOB_FILE=${EXE_DIR}/run_job.sh
308    NPROC=32
309    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
310    cd ${EXE_DIR}
311    set_namelist namelist_cfg cn_exp \"O2L3P_LONG\"
312    set_namelist namelist_cfg nn_it000 1
[10750]313    set_namelist namelist_cfg nn_itend 992
314    set_namelist namelist_cfg nn_stock 496
[7646]315    set_namelist namelist_cfg jpni 4
316    set_namelist namelist_cfg jpnj 8
[10573]317    set_namelist namelist_cfg sn_cfctl%l_config .true.
318    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
319    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9933]320    set_namelist namelist_cfg ln_use_calving .true.
[10189]321    set_namelist namelist_cfg ln_wave .true.
322    set_namelist namelist_cfg ln_cdgw .true.
323    set_namelist namelist_cfg ln_sdw  .true.
324    set_namelist namelist_cfg nn_sdrift 1
325    set_namelist namelist_cfg ln_stcor .true.
326    set_namelist namelist_cfg ln_tauwoc .true.
[9904]327    #
328    if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10687]329    # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
[9904]330    #
[9019]331    set_namelist namelist_ice_cfg ln_icediachk .true.
[4147]332    set_namelist namelist_top_cfg ln_trcdta .false.
[12428]333    set_namelist namelist_top_cfg ln_trcbc  .false.
334    # put ln_ironsed, ln_hydrofe to false
[3520]335    # if not you need input files, and for tests is not necessary
[4147]336    set_namelist namelist_pisces_cfg ln_varpar .false.
337    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]338    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]339    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[9203]340    # put ln_pisdmp to false : no restoring to global mean value
341    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]342    if [ ${USING_MPMD} == "yes" ] ; then
343       set_xio_using_server iodef.xml true
344    else
345       set_xio_using_server iodef.xml false
346    fi
[3520]347    cd ${SETTE_DIR}
[10755]348    . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3532]349   
350    cd ${SETTE_DIR}
[3520]351    export TEST_NAME="SHORT"
[4252]352    . ./prepare_exe_dir.sh
[10755]353    set_valid_dir
[10698]354    clean_valid_dir
[3520]355    cd ${EXE_DIR}
[7646]356    set_namelist namelist_cfg cn_exp \"O2L3P_SHORT\"
[10750]357    set_namelist namelist_cfg nn_it000 497
358    set_namelist namelist_cfg nn_itend 992
359    set_namelist namelist_cfg nn_stock 496
[4147]360    set_namelist namelist_cfg ln_rstart .true.
361    set_namelist namelist_cfg nn_rstctl 2
[7646]362    set_namelist namelist_cfg jpni 4
363    set_namelist namelist_cfg jpnj 8
[10573]364    set_namelist namelist_cfg sn_cfctl%l_config .true.
365    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
366    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9920]367    set_namelist namelist_cfg nn_test_icebergs -1
[10189]368    set_namelist namelist_cfg ln_wave .true.
369    set_namelist namelist_cfg ln_cdgw .true.
370    set_namelist namelist_cfg ln_sdw  .true.
371    set_namelist namelist_cfg nn_sdrift 1
372    set_namelist namelist_cfg ln_stcor .true.
373    set_namelist namelist_cfg ln_tauwoc .true.
[9904]374    #
375    if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10732]376    # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
[9904]377    #
[9933]378    set_namelist namelist_ice_cfg ln_icediachk .true.
[4147]379    set_namelist namelist_top_cfg ln_rsttr .true.
380    set_namelist namelist_top_cfg nn_rsttr 2
[10750]381    set_namelist namelist_cfg cn_ocerst_in \"O2L3P_LONG_00000496_restart\"
[12474]382    set_namelist namelist_cfg cn_icbrst_in \"O2L3P_LONG_00000496_restart_icb\"
[10750]383    set_namelist namelist_top_cfg cn_trcrst_in \"O2L3P_LONG_00000496_restart_trc\"
384    set_namelist namelist_ice_cfg cn_icerst_in \"O2L3P_LONG_00000496_restart_ice\"
[12428]385    set_namelist namelist_top_cfg ln_trcbc  .false.
386    # put ln_ironsed, ln_hydrofe to false
[3520]387    # if not you need input files, and for tests is not necessary
[4147]388    set_namelist namelist_pisces_cfg ln_varpar .false.
389    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]390    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]391    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]392    # put ln_pisdmp to false : no restoring to global mean value
[4147]393    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[3537]394    for (( i=1; i<=$NPROC; i++)) ; do
395        L_NPROC=$(( $i - 1 ))
396        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[10750]397        ln -sf ../LONG/O2L3P_LONG_00000496_restart_${L_NPROC}.nc .
398        ln -sf ../LONG/O2L3P_LONG_00000496_restart_trc_${L_NPROC}.nc .
399        ln -sf ../LONG/O2L3P_LONG_00000496_restart_ice_${L_NPROC}.nc .
[9904]400        if [ ${USING_ICEBERGS} == "yes" ]
401            then
[12474]402             ln -sf ../LONG/O2L3P_LONG_00000496_restart_icb_${L_NPROC}.nc O2L3P_LONG_00000496_restart_icb_${L_NPROC}.nc
[9904]403        fi
[3537]404    done
[4245]405    if [ ${USING_MPMD} == "yes" ] ; then
406       set_xio_using_server iodef.xml true
407    else
408       set_xio_using_server iodef.xml false
409    fi
[3520]410    cd ${SETTE_DIR}
[10755]411    . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]412    cd ${SETTE_DIR}
[3532]413    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]414
[9663]415## Reproducibility tests for ORCA2_ICE_PISCES
[7646]416    export TEST_NAME="REPRO_4_8"
[9658]417    cd ${MAIN_DIR}
[3520]418    cd ${SETTE_DIR}
[4252]419    . ./param.cfg
420    . ./all_functions.sh
421    . ./prepare_exe_dir.sh
[10755]422    set_valid_dir
[10698]423    clean_valid_dir
[3520]424    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]425    NPROC=32
[4245]426    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]427    cd ${EXE_DIR}
[9019]428    set_namelist namelist_cfg cn_exp \"O2L3P_48\"
[4147]429    set_namelist namelist_cfg nn_it000 1
[10750]430    set_namelist namelist_cfg nn_itend 992
[4147]431    set_namelist namelist_cfg jpni 4
[7646]432    set_namelist namelist_cfg jpnj 8
[10573]433    set_namelist namelist_cfg sn_cfctl%l_config .true.
434    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
435    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[10189]436    set_namelist namelist_cfg ln_wave .true.
437    set_namelist namelist_cfg ln_cdgw .true.
438    set_namelist namelist_cfg ln_sdw  .true.
439    set_namelist namelist_cfg nn_sdrift 1
440    set_namelist namelist_cfg ln_stcor .true.
441    set_namelist namelist_cfg ln_tauwoc .true.
442
[9904]443    if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10687]444    # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
445
[4147]446    set_namelist namelist_top_cfg ln_trcdta .false.
[12428]447    set_namelist namelist_top_cfg ln_trcbc  .false.
448    # put ln_ironsed, ln_hydrofe to false
[3520]449    # if not you need input files, and for tests is not necessary
[4147]450    set_namelist namelist_pisces_cfg ln_varpar .false.
451    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]452    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]453    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]454    # put ln_pisdmp to false : no restoring to global mean value
[4147]455    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]456    if [ ${USING_MPMD} == "yes" ] ; then
457       set_xio_using_server iodef.xml true
458    else
459       set_xio_using_server iodef.xml false
460    fi
[3520]461    cd ${SETTE_DIR}
[10755]462    . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]463    cd ${SETTE_DIR}
[3532]464    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]465
466    cd ${SETTE_DIR}
[7646]467    export TEST_NAME="REPRO_8_4"
[4252]468    . ./prepare_exe_dir.sh
[10755]469    set_valid_dir
[10698]470    clean_valid_dir
[3680]471    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]472    NPROC=32
[4245]473    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]474    cd ${EXE_DIR}
[9019]475    set_namelist namelist_cfg cn_exp \"O2L3P_84\"
[4147]476    set_namelist namelist_cfg nn_it000 1
[10750]477    set_namelist namelist_cfg nn_itend 992
[7646]478    set_namelist namelist_cfg jpni 8
479    set_namelist namelist_cfg jpnj 4
[10573]480    set_namelist namelist_cfg sn_cfctl%l_config .true.
481    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
482    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[10189]483    set_namelist namelist_cfg ln_wave .true.
484    set_namelist namelist_cfg ln_cdgw .true.
485    set_namelist namelist_cfg ln_sdw  .true.
486    set_namelist namelist_cfg nn_sdrift 1
487    set_namelist namelist_cfg ln_stcor .true.
488    set_namelist namelist_cfg ln_tauwoc .true.
[10687]489
[9904]490    if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10687]491    # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
492
[4147]493    set_namelist namelist_top_cfg ln_trcdta .false.
[12428]494    set_namelist namelist_top_cfg ln_trcbc  .false.
495    # put ln_ironsed, ln_hydrofe to false
[3520]496    # if not you need input files, and for tests is not necessary
[4147]497    set_namelist namelist_pisces_cfg ln_varpar .false.
498    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]499    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]500    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]501    # put ln_pisdmp to false : no restoring to global mean value
[4147]502    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]503    if [ ${USING_MPMD} == "yes" ] ; then
504       set_xio_using_server iodef.xml true
505    else
506       set_xio_using_server iodef.xml false
507    fi
[3520]508    cd ${SETTE_DIR}
[10755]509    . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]510    cd ${SETTE_DIR}
511    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
512fi
513
[9518]514# ----------------
515# ORCA2_OFF_PISCES
516# ----------------
[10747]517if [ ${config} == "ORCA2_OFF_PISCES" ] ;  then
[9518]518## Restartability tests for ORCA2_OFF_PISCES
[3520]519    export TEST_NAME="LONG"
[9658]520    cd ${MAIN_DIR}
[11497]521    . ./makenemo -m ${CMP_NAM} -n ORCA2_OFF_PISCES_ST -r ORCA2_OFF_PISCES -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[3520]522    cd ${SETTE_DIR}
[4252]523    . ./param.cfg
524    . ./all_functions.sh
525    . ./prepare_exe_dir.sh
[10755]526    set_valid_dir
[10698]527    clean_valid_dir
[3520]528    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]529    NPROC=32
[4245]530    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]531    cd ${EXE_DIR}
[4147]532    set_namelist namelist_cfg cn_exp \"OFFP_LONG\"
533    set_namelist namelist_cfg nn_it000 1
[9560]534    set_namelist namelist_cfg nn_itend 380
535    set_namelist namelist_cfg nn_stock 190
[7646]536    set_namelist namelist_cfg jpni 4
537    set_namelist namelist_cfg jpnj 8
[10573]538    set_namelist namelist_cfg sn_cfctl%l_config .true.
539    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
540    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]541    set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]542    set_namelist namelist_top_cfg ln_trcdta .false.
[12428]543    set_namelist namelist_top_cfg ln_trcbc  .false.
544    # put ln_ironsed, ln_hydrofe to false
[3520]545    # if not you need input files, and for tests is not necessary
[4147]546    set_namelist namelist_pisces_cfg ln_varpar .false.
547    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]548    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]549    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]550    # put ln_pisdmp to false : no restoring to global mean value
[4147]551    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]552    if [ ${USING_MPMD} == "yes" ] ; then
553       set_xio_using_server iodef.xml true
554    else
555       set_xio_using_server iodef.xml false
556    fi
[3520]557    cd ${SETTE_DIR}
[10755]558    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]559   
560    cd ${SETTE_DIR}
561    export TEST_NAME="SHORT"
[4252]562    . ./prepare_exe_dir.sh
[10755]563    set_valid_dir
[10698]564    clean_valid_dir
[3520]565    cd ${EXE_DIR}
[4147]566    set_namelist namelist_cfg cn_exp \"OFFP_SHORT\"
[9560]567    set_namelist namelist_cfg nn_it000 191
568    set_namelist namelist_cfg nn_itend 380
569    set_namelist namelist_cfg nn_stock 190
[7646]570    set_namelist namelist_cfg jpni 4
571    set_namelist namelist_cfg jpnj 8
[10573]572    set_namelist namelist_cfg sn_cfctl%l_config .true.
573    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
574    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]575    set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]576    set_namelist namelist_top_cfg ln_rsttr .true.
577    set_namelist namelist_top_cfg nn_rsttr 2
[9560]578    set_namelist namelist_top_cfg cn_trcrst_in \"OFFP_LONG_00000190_restart_trc\"
[3537]579    for (( i=1; i<=$NPROC; i++)) ; do
580        L_NPROC=$(( $i - 1 ))
581        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9560]582        ln -sf ../LONG/OFFP_LONG_00000190_restart_trc_${L_NPROC}.nc .
[3537]583    done
[12428]584    set_namelist namelist_top_cfg ln_trcbc  .false.
585    # put ln_ironsed, ln_hydrofe to false
[3520]586    # if not you need input files, and for tests is not necessary
[4147]587    set_namelist namelist_pisces_cfg ln_varpar .false.
588    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]589    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]590    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]591    # put ln_pisdmp to false : no restoring to global mean value
[4147]592    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]593    if [ ${USING_MPMD} == "yes" ] ; then
594       set_xio_using_server iodef.xml true
595    else
596       set_xio_using_server iodef.xml false
597    fi
[3520]598    cd ${SETTE_DIR}
[10755]599    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME}  ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]600    cd ${SETTE_DIR}
601    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
602
[9518]603## Reproducibility tests for ORCA2_OFF_PISCES
[7646]604    export TEST_NAME="REPRO_4_8"
[9658]605    cd ${MAIN_DIR}
[3520]606    cd ${SETTE_DIR}
[4252]607    . ./param.cfg
608    . ./all_functions.sh
609    . ./prepare_exe_dir.sh
[10755]610    set_valid_dir
[10698]611    clean_valid_dir
[3520]612    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]613    NPROC=32
[4245]614    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]615    cd ${EXE_DIR}
[9019]616    set_namelist namelist_cfg cn_exp \"OFFP_48\"
[4147]617    set_namelist namelist_cfg nn_it000 1
[9560]618    set_namelist namelist_cfg nn_itend 380
[4147]619    set_namelist namelist_cfg jpni 4
[7646]620    set_namelist namelist_cfg jpnj 8
[10573]621    set_namelist namelist_cfg sn_cfctl%l_config .true.
622    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
623    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]624    set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]625    set_namelist namelist_top_cfg ln_trcdta .false.
[12428]626    set_namelist namelist_top_cfg ln_trcbc  .false.
627    # put ln_ironsed, ln_hydrofe to false
[3520]628    # if not you need input files, and for tests is not necessary
[4147]629    set_namelist namelist_pisces_cfg ln_varpar .false.
630    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]631    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]632    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]633    # put ln_pisdmp to false : no restoring to global mean value
[4147]634    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]635    if [ ${USING_MPMD} == "yes" ] ; then
636       set_xio_using_server iodef.xml true
637    else
638       set_xio_using_server iodef.xml false
639    fi
[3520]640    cd ${SETTE_DIR}
[10755]641    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]642    cd ${SETTE_DIR}
[3532]643    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]644
645    cd ${SETTE_DIR}
[7646]646    export TEST_NAME="REPRO_8_4"
[4252]647    . ./prepare_exe_dir.sh
[10755]648    set_valid_dir
[10698]649    clean_valid_dir
[3680]650    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]651    NPROC=32
[4245]652    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]653    cd ${EXE_DIR}
[9019]654    set_namelist namelist_cfg cn_exp \"OFFP_84\"
[4147]655    set_namelist namelist_cfg nn_it000 1
[9560]656    set_namelist namelist_cfg nn_itend 380
[7646]657    set_namelist namelist_cfg jpni 8
658    set_namelist namelist_cfg jpnj 4
[10573]659    set_namelist namelist_cfg sn_cfctl%l_config .true.
660    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
661    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]662    set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]663    set_namelist namelist_top_cfg ln_trcdta .false.
[12428]664    set_namelist namelist_top_cfg ln_trcbc  .false.
665    # put ln_ironsed, ln_hydrofe to false
[3520]666    # if not you need input files, and for tests is not necessary
[4147]667    set_namelist namelist_pisces_cfg ln_varpar .false.
668    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]669    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]670    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]671    # put ln_pisdmp to false : no restoring to global mean value
[4147]672    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]673    if [ ${USING_MPMD} == "yes" ] ; then
674       set_xio_using_server iodef.xml true
675    else
676       set_xio_using_server iodef.xml false
677    fi
[3520]678    cd ${SETTE_DIR}
[10755]679    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]680    cd ${SETTE_DIR}
681    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
682fi
683
[9518]684# -----
685# AMM12
686# -----
[10747]687if [ ${config} == "AMM12" ] ;  then
[3532]688    ## Restartability tests for AMM12
689    export TEST_NAME="LONG"
[9658]690    cd ${MAIN_DIR}
[11497]691    . ./makenemo -m ${CMP_NAM} -n AMM12_ST -r AMM12 -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[3520]692    cd ${SETTE_DIR}
[4252]693    . ./param.cfg
694    . ./all_functions.sh
695    . ./prepare_exe_dir.sh
[10755]696    set_valid_dir
[10698]697    clean_valid_dir
[3520]698    JOB_FILE=${EXE_DIR}/run_job.sh
699    NPROC=32
[4245]700    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]701    cd ${EXE_DIR}
[9019]702    set_namelist namelist_cfg cn_exp \"AMM12_LONG\"
[4147]703    set_namelist namelist_cfg nn_it000 1
[4252]704    set_namelist namelist_cfg nn_itend 576
705    set_namelist namelist_cfg nn_stock 288
[7646]706    set_namelist namelist_cfg jpni 4
707    set_namelist namelist_cfg jpnj 8
[10573]708    set_namelist namelist_cfg sn_cfctl%l_config .true.
709    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4245]710    if [ ${USING_MPMD} == "yes" ] ; then
711       set_xio_using_server iodef.xml true
712    else
713       set_xio_using_server iodef.xml false
714    fi
[3520]715    cd ${SETTE_DIR}
[10755]716    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]717
718    cd ${SETTE_DIR}
[3532]719    export TEST_NAME="SHORT"
[4379]720    . ./prepare_exe_dir.sh
[10755]721    set_valid_dir
[10698]722    clean_valid_dir
[3520]723    cd ${EXE_DIR}
[9019]724    set_namelist namelist_cfg cn_exp \"AMM12_SHORT\"
[4252]725    set_namelist namelist_cfg nn_it000 289
726    set_namelist namelist_cfg nn_itend 576
[7646]727    set_namelist namelist_cfg jpni 4
728    set_namelist namelist_cfg jpnj 8
[10573]729    set_namelist namelist_cfg sn_cfctl%l_config .true.
730    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4147]731    set_namelist namelist_cfg ln_rstart .true.
732    set_namelist namelist_cfg nn_rstctl 2
[9019]733    set_namelist namelist_cfg cn_ocerst_in \"AMM12_LONG_00000288_restart\"
[4252]734    set_namelist namelist_cfg nn_date0 20120102
[3537]735    for (( i=1; i<=$NPROC; i++)) ; do
736        L_NPROC=$(( $i - 1 ))
737        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9019]738        ln -sf ../LONG/AMM12_LONG_00000288_restart_${L_NPROC}.nc .
[3537]739    done
[4245]740    if [ ${USING_MPMD} == "yes" ] ; then
741       set_xio_using_server iodef.xml true
742    else
743       set_xio_using_server iodef.xml false
744    fi
[3520]745    cd ${SETTE_DIR}
[10755]746    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]747    cd ${SETTE_DIR}
[3532]748    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]749
[3680]750## Reproducibility tests for AMM12
751    export TEST_NAME="REPRO_8_4"
[9658]752    cd ${MAIN_DIR}
[3520]753    cd ${SETTE_DIR}
[4252]754    . ./param.cfg
755    . ./all_functions.sh
756    . ./prepare_exe_dir.sh
[10755]757    set_valid_dir
[10698]758    clean_valid_dir
[3520]759    JOB_FILE=${EXE_DIR}/run_job.sh
760    NPROC=32
[4245]761    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]762    cd ${EXE_DIR}
[9019]763    set_namelist namelist_cfg cn_exp \"AMM12_84\"
[4147]764    set_namelist namelist_cfg nn_it000 1
765    set_namelist namelist_cfg nn_itend 576
766    set_namelist namelist_cfg jpni 8
767    set_namelist namelist_cfg jpnj 4
[10573]768    set_namelist namelist_cfg sn_cfctl%l_config .true.
769    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4245]770    if [ ${USING_MPMD} == "yes" ] ; then
771       set_xio_using_server iodef.xml true
772    else
773       set_xio_using_server iodef.xml false
774    fi
[3520]775    cd ${SETTE_DIR}
[10755]776    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]777    cd ${SETTE_DIR}
778    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
779
780    cd ${SETTE_DIR}
[3680]781    export TEST_NAME="REPRO_4_8"
[4252]782    . ./prepare_exe_dir.sh
[10755]783    set_valid_dir
[10698]784    clean_valid_dir
[5478]785    JOB_FILE=${EXE_DIR}/run_job.sh
786    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]787    cd ${EXE_DIR}
[9019]788    set_namelist namelist_cfg cn_exp \"AMM12_48\"
[4147]789    set_namelist namelist_cfg nn_it000 1
790    set_namelist namelist_cfg nn_itend 576
791    set_namelist namelist_cfg jpni 4
792    set_namelist namelist_cfg jpnj 8
[10573]793    set_namelist namelist_cfg sn_cfctl%l_config .true.
794    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4245]795    if [ ${USING_MPMD} == "yes" ] ; then
796       set_xio_using_server iodef.xml true
797    else
798       set_xio_using_server iodef.xml false
799    fi
[3520]800    cd ${SETTE_DIR}
[10755]801    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]802    cd ${SETTE_DIR}
[3532]803    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]804fi
805
806
[9518]807# ---------
808# ORCA2_SAS
809# ---------
[10747]810if [ ${config} == "SAS" ] ;  then
[9518]811## Restartability tests
[4147]812    export TEST_NAME="LONG"
[9658]813    cd ${MAIN_DIR}
[11497]814    . ./makenemo -m ${CMP_NAM} -n ORCA2_SAS_ICE_ST -r ORCA2_SAS_ICE -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[4147]815    cd ${SETTE_DIR}
[4252]816    . ./param.cfg
817    . ./all_functions.sh
818    . ./prepare_exe_dir.sh
[10755]819    set_valid_dir
[10698]820    clean_valid_dir
[4147]821    JOB_FILE=${EXE_DIR}/run_job.sh
822    NPROC=32
[7646]823    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]824    cd ${EXE_DIR}
825    set_namelist namelist_cfg cn_exp \"SAS\"
826    set_namelist namelist_cfg nn_it000 1
[10750]827    set_namelist namelist_cfg nn_itend 256
828    set_namelist namelist_cfg nn_stock 128
[7646]829    set_namelist namelist_cfg jpni 4
830    set_namelist namelist_cfg jpnj 8
[10573]831    set_namelist namelist_cfg sn_cfctl%l_config .true.
832    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9019]833    set_namelist namelist_ice_cfg ln_icediachk .true.
[4245]834    if [ ${USING_MPMD} == "yes" ] ; then
835       set_xio_using_server iodef.xml true
836    else
837       set_xio_using_server iodef.xml false
838    fi
[4147]839    cd ${SETTE_DIR}
[10755]840    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4147]841
842    cd ${SETTE_DIR}
843    export TEST_NAME="SHORT"
[4252]844    . ./prepare_exe_dir.sh
[10755]845    set_valid_dir
[10698]846    clean_valid_dir
[4147]847    cd ${EXE_DIR}
848    set_namelist namelist_cfg cn_exp \"SAS\"
[10750]849    set_namelist namelist_cfg nn_it000 129
850    set_namelist namelist_cfg nn_itend 256
[7646]851    set_namelist namelist_cfg jpni 4
852    set_namelist namelist_cfg jpnj 8
[10573]853    set_namelist namelist_cfg sn_cfctl%l_config .true.
854    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[7646]855    set_namelist namelist_cfg ln_rstart .true.
[4147]856    set_namelist namelist_cfg nn_rstctl 2
[9019]857    set_namelist namelist_cfg nn_date0 010109
[10750]858    set_namelist namelist_cfg cn_ocerst_in \"SAS_00000128_restart\"
859    set_namelist namelist_ice_cfg cn_icerst_in \"SAS_00000128_restart_ice\"
[4245]860    if [ ${USING_MPMD} == "yes" ] ; then
861       set_xio_using_server iodef.xml true
862    else
863       set_xio_using_server iodef.xml false
864    fi
[7646]865    for (( i=1; i<=$NPROC; i++)) ; do
866        L_NPROC=$(( $i - 1 ))
867        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[10750]868        ln -sf ../LONG/SAS_00000128_restart_${L_NPROC}.nc .
869        ln -sf ../LONG/SAS_00000128_restart_ice_${L_NPROC}.nc .
[7646]870    done
[4147]871    cd ${SETTE_DIR}
[10755]872    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4147]873    cd ${SETTE_DIR}
874    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
875
[9518]876## Reproducibility tests
877    export TEST_NAME="REPRO_4_8"
[9658]878    cd ${MAIN_DIR}
[4990]879    cd ${SETTE_DIR}
880    . ./param.cfg
881    . ./all_functions.sh
882    . ./prepare_exe_dir.sh
[10755]883    set_valid_dir
[10698]884    clean_valid_dir
[4990]885    JOB_FILE=${EXE_DIR}/run_job.sh
[9518]886    NPROC=32
[4990]887    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
888    cd ${EXE_DIR}
[9518]889    set_namelist namelist_cfg cn_exp \"SAS_48\"
[4990]890    set_namelist namelist_cfg nn_it000 1
[10750]891    set_namelist namelist_cfg nn_itend 80
[9518]892    set_namelist namelist_cfg jpni 4
893    set_namelist namelist_cfg jpnj 8
[10573]894    set_namelist namelist_cfg sn_cfctl%l_config .true.
895    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4990]896    if [ ${USING_MPMD} == "yes" ] ; then
897       set_xio_using_server iodef.xml true
898    else
899       set_xio_using_server iodef.xml false
900    fi
901    cd ${SETTE_DIR}
[10755]902    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]903    cd ${SETTE_DIR}
904    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[9019]905
[4990]906    cd ${SETTE_DIR}
[7646]907    export TEST_NAME="REPRO_8_4"
[4990]908    . ./prepare_exe_dir.sh
[10755]909    set_valid_dir
[10698]910    clean_valid_dir
[4990]911    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]912    NPROC=32
[4990]913    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
914    cd ${EXE_DIR}
[9518]915    set_namelist namelist_cfg cn_exp \"SAS_84\"
[4990]916    set_namelist namelist_cfg nn_it000 1
[10750]917    set_namelist namelist_cfg nn_itend 80
[7646]918    set_namelist namelist_cfg jpni 8
919    set_namelist namelist_cfg jpnj 4
[10573]920    set_namelist namelist_cfg sn_cfctl%l_config .true.
921    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4990]922    if [ ${USING_MPMD} == "yes" ] ; then
923       set_xio_using_server iodef.xml true
924    else
925       set_xio_using_server iodef.xml false
926    fi
927    cd ${SETTE_DIR}
[10755]928    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]929    cd ${SETTE_DIR}
930    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
931
932fi
933
[9518]934
935# --------------
[9663]936# ORCA2_ICE_OBS
[9518]937# --------------
[4990]938## Test assimilation interface code, OBS and ASM for reproducibility
939## Restartability not tested (ASM code not restartable while increments are being applied)
[10747]940if [ ${config} == "ORCA2_ICE_OBS" ] ; then
[9518]941## Reproducibility tests
[7646]942    export TEST_NAME="REPRO_4_8"
[9658]943    cd ${MAIN_DIR}
[10687]944    . ./makenemo -m ${CMP_NAM} -n ORCA2_ICE_OBS_ST -r ORCA2_ICE_PISCES -d "OCE ICE"  -j 8 add_key "key_asminc ${ADD_KEYS}" del_key "key_top"
[4990]945    cd ${SETTE_DIR}
946    . ./param.cfg
947    . ./all_functions.sh
948    . ./prepare_exe_dir.sh
[10755]949    set_valid_dir
[10698]950    clean_valid_dir
[4990]951    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]952    NPROC=32
[4990]953    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
954    cd ${EXE_DIR}
[9019]955    set_namelist namelist_cfg cn_exp \"O2L3OBS_48\"
[4990]956    set_namelist namelist_cfg nn_it000 1
[10750]957    set_namelist namelist_cfg nn_itend 80
[7646]958    set_namelist namelist_cfg ln_read_cfg .true.
[4990]959    set_namelist namelist_cfg jpni 4
[7646]960    set_namelist namelist_cfg jpnj 8
[10573]961    set_namelist namelist_cfg sn_cfctl%l_config .true.
962    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
963    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[6140]964    set_namelist namelist_cfg ln_diaobs .true.
[4990]965    set_namelist namelist_cfg ln_t3d .true.
966    set_namelist namelist_cfg ln_s3d .true.
967    set_namelist namelist_cfg ln_sst .true.
968    set_namelist namelist_cfg ln_sla .true.
[6140]969    set_namelist namelist_cfg ln_sic .true.
970    set_namelist namelist_cfg ln_vel3d .true.
[4990]971    set_namelist namelist_cfg ln_bkgwri .true.
972    set_namelist namelist_cfg ln_trainc .true.
973    set_namelist namelist_cfg ln_dyninc .true.
974    set_namelist namelist_cfg ln_sshinc .true.
975    set_namelist namelist_cfg ln_asmiau .true.
[9663]976    #remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration)
[7722]977    set_namelist namelist_top_cfg ln_trcdta .false.
[12428]978    set_namelist namelist_top_cfg ln_trcbc  .false.
[7722]979    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
980    # if not you need input files, and for tests is not necessary
981    set_namelist namelist_pisces_cfg ln_varpar .false.
982    set_namelist namelist_pisces_cfg ln_ironsed .false.
983    set_namelist namelist_pisces_cfg ln_ironice .false.
984    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4990]985    if [ ${USING_MPMD} == "yes" ] ; then
986       set_xio_using_server iodef.xml true
987    else
988       set_xio_using_server iodef.xml false
989    fi
990    cd ${SETTE_DIR}
[10755]991    . ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]992    cd ${SETTE_DIR}
993    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
994
995   cd ${SETTE_DIR}
[7646]996    export TEST_NAME="REPRO_8_4"
[4990]997    . ./prepare_exe_dir.sh
[10755]998    set_valid_dir
[10698]999    clean_valid_dir
[4990]1000    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]1001    NPROC=32
[4990]1002    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1003    cd ${EXE_DIR}
[9019]1004    set_namelist namelist_cfg cn_exp \"O2L3OBS_84\"
[4990]1005    set_namelist namelist_cfg nn_it000 1
[10750]1006    set_namelist namelist_cfg nn_itend 80
[7646]1007    set_namelist namelist_cfg ln_read_cfg .true.
1008    set_namelist namelist_cfg jpni 8
1009    set_namelist namelist_cfg jpnj 4
[10573]1010    set_namelist namelist_cfg sn_cfctl%l_config .true.
1011    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
1012    set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[6140]1013    set_namelist namelist_cfg ln_diaobs .true.
[4990]1014    set_namelist namelist_cfg ln_t3d .true.
1015    set_namelist namelist_cfg ln_s3d .true.
1016    set_namelist namelist_cfg ln_sst .true.
1017    set_namelist namelist_cfg ln_sla .true.
[6140]1018    set_namelist namelist_cfg ln_sic .true.
1019    set_namelist namelist_cfg ln_vel3d .true.
[4990]1020    set_namelist namelist_cfg ln_bkgwri .true.
1021    set_namelist namelist_cfg ln_trainc .true.
1022    set_namelist namelist_cfg ln_dyninc .true.
1023    set_namelist namelist_cfg ln_sshinc .true.
1024    set_namelist namelist_cfg ln_asmiau .true.
[9663]1025    #remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration)
[7722]1026    set_namelist namelist_top_cfg ln_trcdta .false.
[12428]1027    set_namelist namelist_top_cfg ln_trcbc  .false.
[7722]1028    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
1029    # if not you need input files, and for tests is not necessary
1030    set_namelist namelist_pisces_cfg ln_varpar .false.
1031    set_namelist namelist_pisces_cfg ln_ironsed .false.
1032    set_namelist namelist_pisces_cfg ln_ironice .false.
1033    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4990]1034    if [ ${USING_MPMD} == "yes" ] ; then
1035       set_xio_using_server iodef.xml true
1036    else
1037       set_xio_using_server iodef.xml false
1038    fi
1039    cd ${SETTE_DIR}
[10755]1040    . ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]1041    cd ${SETTE_DIR}
1042    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1043fi
[5589]1044
[9483]1045# ------------
[9663]1046# AGRIF ICE
[9483]1047# -----------
[10747]1048if [ ${config} == "AGRIF" ] ;  then
[9518]1049## Restartability tests
[9483]1050    export TEST_NAME="LONG"
[9658]1051    cd ${MAIN_DIR}
[11497]1052    . ./makenemo -m ${CMP_NAM} -n AGRIF_DEMO_ST -r AGRIF_DEMO -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9483]1053    cd ${SETTE_DIR}
1054    . ./param.cfg
1055    . ./all_functions.sh
1056    . ./prepare_exe_dir.sh
[10755]1057    set_valid_dir
[10698]1058    clean_valid_dir
[9483]1059    JOB_FILE=${EXE_DIR}/run_job.sh
[9776]1060    NPROC=16
[9483]1061    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1062    cd ${EXE_DIR}
1063    set_namelist namelist_cfg cn_exp \"AGRIF_LONG\"
1064    set_namelist namelist_cfg nn_it000 1
1065    set_namelist namelist_cfg nn_itend 20
1066    set_namelist namelist_cfg nn_stock 10
[10573]1067    set_namelist namelist_cfg sn_cfctl%l_config .true.
1068    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9483]1069    set_namelist 1_namelist_cfg cn_exp \"AGRIF_LONG\"
1070    set_namelist 1_namelist_cfg nn_it000 1
[9776]1071    set_namelist 1_namelist_cfg nn_itend 20
1072    set_namelist 1_namelist_cfg nn_stock 10
[10573]1073    set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
1074    set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9483]1075    set_namelist 2_namelist_cfg cn_exp \"AGRIF_LONG\"
1076    set_namelist 2_namelist_cfg nn_it000 1
[9776]1077    set_namelist 2_namelist_cfg nn_itend 80
1078    set_namelist 2_namelist_cfg nn_stock 40
[10573]1079    set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
1080    set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[9776]1081    set_namelist 3_namelist_cfg cn_exp \"AGRIF_LONG\"
1082    set_namelist 3_namelist_cfg nn_it000 1
1083    set_namelist 3_namelist_cfg nn_itend 240
1084    set_namelist 3_namelist_cfg nn_stock 120
[10573]1085    set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
1086    set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9507]1087
[9483]1088    if [ ${USING_MPMD} == "yes" ] ; then
1089       set_xio_using_server iodef.xml true
1090    else
1091       set_xio_using_server iodef.xml false
1092    fi
1093    cd ${SETTE_DIR}
[10755]1094    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]1095   
1096    cd ${SETTE_DIR}
1097    export TEST_NAME="SHORT"
1098    . ./prepare_exe_dir.sh
[10755]1099    set_valid_dir
[10698]1100    clean_valid_dir
[9483]1101    cd ${EXE_DIR}
1102    set_namelist namelist_cfg cn_exp \"AGRIF_SHORT\"
1103    set_namelist namelist_cfg nn_it000 11
1104    set_namelist namelist_cfg nn_itend 20
1105    set_namelist namelist_cfg nn_stock 10
[10573]1106    set_namelist namelist_cfg sn_cfctl%l_config .true.
1107    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9483]1108    set_namelist namelist_cfg ln_rstart .true.
1109    set_namelist namelist_cfg nn_rstctl 2
1110    set_namelist 1_namelist_cfg cn_exp \"AGRIF_SHORT\"
[9776]1111    set_namelist 1_namelist_cfg nn_it000 11
1112    set_namelist 1_namelist_cfg nn_itend 20
1113    set_namelist 1_namelist_cfg nn_stock 10
[10573]1114    set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
1115    set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9483]1116    set_namelist 1_namelist_cfg ln_rstart .true.
1117    set_namelist 1_namelist_cfg nn_rstctl 2
1118    set_namelist 2_namelist_cfg cn_exp \"AGRIF_SHORT\"
[9776]1119    set_namelist 2_namelist_cfg nn_it000 41
1120    set_namelist 2_namelist_cfg nn_itend 80
1121    set_namelist 2_namelist_cfg nn_stock 40
[10573]1122    set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
1123    set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[9483]1124    set_namelist 2_namelist_cfg ln_rstart .true.
1125    set_namelist 2_namelist_cfg nn_rstctl 2
[9776]1126    set_namelist 3_namelist_cfg cn_exp \"AGRIF_SHORT\"
1127    set_namelist 3_namelist_cfg nn_it000 121
1128    set_namelist 3_namelist_cfg nn_itend 240
1129    set_namelist 3_namelist_cfg nn_stock 120
[10573]1130    set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
1131    set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9776]1132    set_namelist 3_namelist_cfg ln_rstart .true.
1133    set_namelist 3_namelist_cfg nn_rstctl 2
[9483]1134    set_namelist namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000010_restart\"
1135    set_namelist namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000010_restart_ice\"
[9776]1136    set_namelist 1_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000010_restart\"
1137    set_namelist 1_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000010_restart_ice\"
1138    set_namelist 2_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000040_restart\"
1139    set_namelist 2_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000040_restart_ice\"
1140    set_namelist 3_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000120_restart\"
1141    set_namelist 3_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000120_restart_ice\"
[9483]1142
1143    for (( i=1; i<=$NPROC; i++)) ; do
1144        L_NPROC=$(( $i - 1 ))
1145        L_NPROC=`printf "%04d\n" ${L_NPROC}`
1146        ln -sf ../LONG/AGRIF_LONG_00000010_restart_${L_NPROC}.nc .
1147        ln -sf ../LONG/AGRIF_LONG_00000010_restart_ice_${L_NPROC}.nc .
[9776]1148        ln -sf ../LONG/1_AGRIF_LONG_00000010_restart_${L_NPROC}.nc .
1149        ln -sf ../LONG/1_AGRIF_LONG_00000010_restart_ice_${L_NPROC}.nc .
1150        ln -sf ../LONG/2_AGRIF_LONG_00000040_restart_${L_NPROC}.nc .
1151        ln -sf ../LONG/2_AGRIF_LONG_00000040_restart_ice_${L_NPROC}.nc .
1152        ln -sf ../LONG/3_AGRIF_LONG_00000120_restart_${L_NPROC}.nc .
1153        ln -sf ../LONG/3_AGRIF_LONG_00000120_restart_ice_${L_NPROC}.nc .
[9483]1154    done
1155    if [ ${USING_MPMD} == "yes" ] ; then
1156       set_xio_using_server iodef.xml true
1157    else
1158       set_xio_using_server iodef.xml false
1159    fi
1160    cd ${SETTE_DIR}
[10755]1161    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]1162    cd ${SETTE_DIR}
1163    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1164
[9518]1165## Reproducibility tests
[11800]1166    export TEST_NAME="REPRO_2_8"
[9658]1167    cd ${MAIN_DIR}
[9483]1168    cd ${SETTE_DIR}
1169    . ./param.cfg
1170    . ./all_functions.sh
1171    . ./prepare_exe_dir.sh
[10755]1172    set_valid_dir
[10698]1173    clean_valid_dir
[9483]1174    JOB_FILE=${EXE_DIR}/run_job.sh
[11800]1175    NPROC=16
[9483]1176    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1177    cd ${EXE_DIR}
[11800]1178    set_namelist namelist_cfg cn_exp \"AGRIF_28\"
[9483]1179    set_namelist namelist_cfg nn_it000 1
1180    set_namelist namelist_cfg nn_itend 20
[11800]1181    set_namelist namelist_cfg jpni 2
[9483]1182    set_namelist namelist_cfg jpnj 8
[10573]1183    set_namelist namelist_cfg sn_cfctl%l_config .true.
1184    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[11800]1185    set_namelist 1_namelist_cfg cn_exp \"AGRIF_28\"
[9483]1186    set_namelist 1_namelist_cfg nn_it000 1
[9776]1187    set_namelist 1_namelist_cfg nn_itend 20
[11800]1188    set_namelist 1_namelist_cfg jpni 2
[9483]1189    set_namelist 1_namelist_cfg jpnj 8
[10573]1190    set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
1191    set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[11800]1192    set_namelist 2_namelist_cfg cn_exp \"AGRIF_28\"
[9483]1193    set_namelist 2_namelist_cfg nn_it000 1
[9776]1194    set_namelist 2_namelist_cfg nn_itend 80
[11800]1195    set_namelist 2_namelist_cfg jpni 2
[9483]1196    set_namelist 2_namelist_cfg jpnj 8
[10573]1197    set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
1198    set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[11800]1199    set_namelist 3_namelist_cfg cn_exp \"AGRIF_28\"
[9776]1200    set_namelist 3_namelist_cfg nn_it000 1
1201    set_namelist 3_namelist_cfg nn_itend 240
[11800]1202    set_namelist 3_namelist_cfg jpni 2
[9776]1203    set_namelist 3_namelist_cfg jpnj 8
[10573]1204    set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
1205    set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9483]1206
1207    if [ ${USING_MPMD} == "yes" ] ; then
1208       set_xio_using_server iodef.xml true
1209    else
1210       set_xio_using_server iodef.xml false
1211    fi
1212    cd ${SETTE_DIR}
[10755]1213    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]1214    cd ${SETTE_DIR}
1215    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1216
1217    cd ${SETTE_DIR}
[11800]1218    export TEST_NAME="REPRO_4_4"
[9483]1219    . ./prepare_exe_dir.sh
[10755]1220    set_valid_dir
[10698]1221    clean_valid_dir
[9483]1222    JOB_FILE=${EXE_DIR}/run_job.sh
[11800]1223    NPROC=16
[9483]1224    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1225    cd ${EXE_DIR}
[11800]1226    set_namelist namelist_cfg cn_exp \"AGRIF_44\"
[9483]1227    set_namelist namelist_cfg nn_it000 1
1228    set_namelist namelist_cfg nn_itend 20
[11800]1229    set_namelist namelist_cfg jpni 4
[9483]1230    set_namelist namelist_cfg jpnj 4
[10573]1231    set_namelist namelist_cfg sn_cfctl%l_config .true.
1232    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[11800]1233    set_namelist 1_namelist_cfg cn_exp \"AGRIF_44\"
[9483]1234    set_namelist 1_namelist_cfg nn_it000 1
[9776]1235    set_namelist 1_namelist_cfg nn_itend 20
[11800]1236    set_namelist 1_namelist_cfg jpni 4
[9483]1237    set_namelist 1_namelist_cfg jpnj 4
[10573]1238    set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
1239    set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[11800]1240    set_namelist 2_namelist_cfg cn_exp \"AGRIF_44\"
[9483]1241    set_namelist 2_namelist_cfg nn_it000 1
[9776]1242    set_namelist 2_namelist_cfg nn_itend 80
[11800]1243    set_namelist 2_namelist_cfg jpni 4
[9483]1244    set_namelist 2_namelist_cfg jpnj 4
[10573]1245    set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
1246    set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[12428]1247    set_namelist 3_namelist_cfg cn_exp \"AGRIF_44\"
[9776]1248    set_namelist 3_namelist_cfg nn_it000 1
1249    set_namelist 3_namelist_cfg nn_itend 240
[11800]1250    set_namelist 3_namelist_cfg jpni 4
[9776]1251    set_namelist 3_namelist_cfg jpnj 4
[10573]1252    set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
1253    set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9483]1254
1255    if [ ${USING_MPMD} == "yes" ] ; then
1256       set_xio_using_server iodef.xml true
1257    else
1258       set_xio_using_server iodef.xml false
1259    fi
1260    cd ${SETTE_DIR}
[10755]1261    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]1262    cd ${SETTE_DIR}
1263    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1264
[9507]1265## test code corruption with AGRIF (phase 1) ==> Compile with key_agrif but run with no zoom
1266    export TEST_NAME="ORCA2"
[9658]1267    cd ${MAIN_DIR}
[9483]1268    cd ${SETTE_DIR}
1269    . ./param.cfg
1270    . ./all_functions.sh
1271    . ./prepare_exe_dir.sh
[10755]1272    set_valid_dir
[10698]1273    clean_valid_dir
[9483]1274    JOB_FILE=${EXE_DIR}/run_job.sh
1275    NPROC=32
1276    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1277    cd ${EXE_DIR}
[9507]1278    set_namelist namelist_cfg cn_exp \"ORCA2\"
[9483]1279    set_namelist namelist_cfg nn_it000 1
1280    set_namelist namelist_cfg nn_itend 150
[10573]1281    set_namelist namelist_cfg sn_cfctl%l_config .true.
1282    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9507]1283
[9483]1284#   Set the number of fine grids to zero:   
1285    sed -i "1s/.*/0/" ${EXE_DIR}/AGRIF_FixedGrids.in
1286
1287    if [ ${USING_MPMD} == "yes" ] ; then
1288       set_xio_using_server iodef.xml true
1289    else
1290       set_xio_using_server iodef.xml false
1291    fi
1292    cd ${SETTE_DIR}
[10755]1293    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]1294    cd ${SETTE_DIR}
1295    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1296
1297fi
1298
[9525]1299
[9776]1300## test code corruption with AGRIF (phase 2) ==> Compile without key_agrif (to be compared with AGRIF_DEMO_ST/ORCA2)
[10747]1301if [ ${config} == "AGRIF" ] ;  then
[9507]1302    export TEST_NAME="ORCA2"
[9658]1303    cd ${MAIN_DIR}
[11497]1304    . ./makenemo -m ${CMP_NAM} -n AGRIF_DEMO_NOAGRIF_ST -r AGRIF_DEMO -j 8 add_key "${ADD_KEYS}" del_key "key_agrif"
[9483]1305    cd ${SETTE_DIR}
1306    . ./param.cfg
1307    . ./all_functions.sh
1308    . ./prepare_exe_dir.sh
[10755]1309    set_valid_dir
[10698]1310    clean_valid_dir
[9483]1311    JOB_FILE=${EXE_DIR}/run_job.sh
1312    NPROC=32
1313    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1314    cd ${EXE_DIR}
[9507]1315    set_namelist namelist_cfg cn_exp \"ORCA2\"
[9483]1316    set_namelist namelist_cfg nn_it000 1
1317    set_namelist namelist_cfg nn_itend 150
[10573]1318    set_namelist namelist_cfg sn_cfctl%l_config .true.
1319    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9483]1320#
1321    if [ ${USING_MPMD} == "yes" ] ; then
1322       set_xio_using_server iodef.xml true
1323    else
1324       set_xio_using_server iodef.xml false
1325    fi
1326    cd ${SETTE_DIR}
[10755]1327    . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]1328    cd ${SETTE_DIR}
1329    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1330
1331fi
1332
[9553]1333# -------
1334# SPITZ12
1335# -------
[10747]1336if [ ${config} == "SPITZ12" ] ;  then
[9553]1337## Restartability tests
1338    export TEST_NAME="LONG"
[9658]1339    cd ${MAIN_DIR}
[11497]1340    . ./makenemo -m ${CMP_NAM} -n SPITZ12_ST -r SPITZ12 -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9553]1341    cd ${SETTE_DIR}
1342    . ./param.cfg
1343    . ./all_functions.sh
1344    . ./prepare_exe_dir.sh
[10755]1345    set_valid_dir
[10698]1346    clean_valid_dir
[9553]1347    JOB_FILE=${EXE_DIR}/run_job.sh
1348    NPROC=32
1349    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1350    cd ${EXE_DIR}
1351    set_namelist namelist_cfg cn_exp \"S12_LONG\"
1352    set_namelist namelist_cfg nn_it000 1
[9744]1353    set_namelist namelist_cfg nn_itend 240
1354    set_namelist namelist_cfg nn_stock 120
1355    set_namelist namelist_cfg nn_date0 20020101
[9553]1356    set_namelist namelist_cfg jpni 4
1357    set_namelist namelist_cfg jpnj 8
[10573]1358    set_namelist namelist_cfg sn_cfctl%l_config .true.
1359    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9744]1360    #set_namelist namelist_ice_cfg ln_icediachk .true.
[9553]1361    if [ ${USING_MPMD} == "yes" ] ; then
1362       set_xio_using_server iodef.xml true
1363    else
1364       set_xio_using_server iodef.xml false
1365    fi
1366    cd ${SETTE_DIR}
[10755]1367    . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]1368   
1369    cd ${SETTE_DIR}
1370    export TEST_NAME="SHORT"
1371    . ./prepare_exe_dir.sh
[10755]1372    set_valid_dir
[10698]1373    clean_valid_dir
[9553]1374    cd ${EXE_DIR}
1375    set_namelist namelist_cfg cn_exp \"S12_SHORT\"
[9744]1376    set_namelist namelist_cfg nn_it000 121
1377    set_namelist namelist_cfg nn_itend 240
1378    set_namelist namelist_cfg nn_stock 120
[9553]1379    set_namelist namelist_cfg ln_rstart .true.
1380    set_namelist namelist_cfg nn_rstctl 2
1381    set_namelist namelist_cfg jpni 4
1382    set_namelist namelist_cfg jpnj 8
[10573]1383    set_namelist namelist_cfg sn_cfctl%l_config .true.
1384    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9744]1385    set_namelist namelist_cfg cn_ocerst_in \"S12_LONG_00000120_restart\"
1386    set_namelist namelist_ice_cfg cn_icerst_in \"S12_LONG_00000120_restart_ice\"
[9553]1387    for (( i=1; i<=$NPROC; i++)) ; do
1388        L_NPROC=$(( $i - 1 ))
1389        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9744]1390        ln -sf ../LONG/S12_LONG_00000120_restart_${L_NPROC}.nc .
1391        ln -sf ../LONG/S12_LONG_00000120_restart_ice_${L_NPROC}.nc .
[9553]1392    done
1393    if [ ${USING_MPMD} == "yes" ] ; then
1394       set_xio_using_server iodef.xml true
1395    else
1396       set_xio_using_server iodef.xml false
1397    fi
1398    cd ${SETTE_DIR}
[10755]1399    . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]1400    cd ${SETTE_DIR}
1401    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1402
1403## Reproducibility tests
1404    export TEST_NAME="REPRO_4_8"
[9658]1405    cd ${MAIN_DIR}
[9553]1406    cd ${SETTE_DIR}
1407    . ./param.cfg
1408    . ./all_functions.sh
1409    . ./prepare_exe_dir.sh
[10755]1410    set_valid_dir
[10698]1411    clean_valid_dir
[9553]1412    JOB_FILE=${EXE_DIR}/run_job.sh
1413    NPROC=32
1414    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1415    cd ${EXE_DIR}
1416    set_namelist namelist_cfg cn_exp \"S12_48\"
1417    set_namelist namelist_cfg nn_it000 1
[9744]1418    set_namelist namelist_cfg nn_itend 120
1419    set_namelist namelist_cfg nn_date0 20020101
[9553]1420    set_namelist namelist_cfg jpni 4
1421    set_namelist namelist_cfg jpnj 8
[10573]1422    set_namelist namelist_cfg sn_cfctl%l_config .true.
1423    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9553]1424    if [ ${USING_MPMD} == "yes" ] ; then
1425       set_xio_using_server iodef.xml true
1426    else
1427       set_xio_using_server iodef.xml false
1428    fi
1429    cd ${SETTE_DIR}
[10755]1430    . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]1431    cd ${SETTE_DIR}
1432    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1433
1434    cd ${SETTE_DIR}
1435    export TEST_NAME="REPRO_8_4"
1436    . ./prepare_exe_dir.sh
[10755]1437    set_valid_dir
[10698]1438    clean_valid_dir
[9553]1439    JOB_FILE=${EXE_DIR}/run_job.sh
1440    NPROC=32
1441    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1442    cd ${EXE_DIR}
1443    set_namelist namelist_cfg cn_exp \"S12_84\"
1444    set_namelist namelist_cfg nn_it000 1
[9744]1445    set_namelist namelist_cfg nn_itend 120
1446    set_namelist namelist_cfg nn_date0 20020101
[9553]1447    set_namelist namelist_cfg jpni 8
1448    set_namelist namelist_cfg jpnj 4
[10573]1449    set_namelist namelist_cfg sn_cfctl%l_config .true.
1450    set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9553]1451    if [ ${USING_MPMD} == "yes" ] ; then
1452       set_xio_using_server iodef.xml true
1453    else
1454       set_xio_using_server iodef.xml false
1455    fi
1456    cd ${SETTE_DIR}
[10755]1457    . ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]1458    cd ${SETTE_DIR}
1459    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1460fi
1461
1462
[3520]1463done
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