#!/bin/bash ############################################################ # Author : Simona Flavoni for NEMO # Contact: sflod@locean-ipsl.upmc.fr # 2013 : A.C. Coward added options for testing with XIOS in dettached mode # # sette.sh : principal script of SET TEsts for NEMO (SETTE) # ---------------------------------------------------------------------- # NEMO/SETTE , NEMO Consortium (2010) # Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) # ---------------------------------------------------------------------- # ############################################################# #set -vx set -o posix #set -u #set -e # =========== # DESCRIPTION # =========== # # Variables to be checked by user: # # COMPILER : name of compiler as defined in NEMOGCM/ARCH directory # BATCH_COMMAND_PAR : name of the command for submitting parallel batch jobs # BATCH_COMMAND_SEQ : name of the command for submitting sequential batch jobs # INTERACT_FLAG : flag to run in interactive mode "yes" # to run in batch mode "no" # MPIRUN_FLAG : flag to run in parallel (MPI) "yes" # to run in sequential mode (NB_PROC = 1) "no" # NUM_XIOSERVERS : number of stand-alone IO servers to employ # set to zero if USING_MPMD="no" # # Principal script is sette.sh, that calls # # makenemo : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe # and links to nemo in ${CONFIG_NAME}/EXP00) # # param.cfg : sets and loads following directories: # This will have been run by the parent sette.sh and values exported here # # FORCING_DIR : is the directory for forcing files (tarfile) # INPUT_DIR : is the directory for input files storing # TMPDIR : is the temporary directory (if needed) # NEMO_VALIDATION_DIR : is the validation directory # # (NOTE: this file is the same for all configrations to be tested with sette) # # all_functions.sh : loads functions used by sette (note: new functions can be added here) # set_namelist : function declared in all_functions that sets namelist parameters # post_test_tidyup : creates validation storage directory and copies required output files # (run.stat and ocean.output) in it after execution of test. # # VALIDATION tree is: # # NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE) # # prepare_exe_dir.sh : defines and creates directory where the test is executed # execution directory takes name of TEST_NAME defined for every test # in sette.sh. (each test in executed in its own directory) # # set_valid_dir : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report # # clean_valid_dir : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report # ( not doing it could lead to false positive ) # # prepare_job.sh : to generate the script run_job.sh # # fcm_job.sh : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes") # see sette.sh and BATCH_TEMPLATE directory # # NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which # can be found paths to the input tar file) # NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR} # directory # NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists # remain in ${NEW_CONF}/EXP00 # # NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of # executed commands # # NOTE: if sette.sh is stopped in output.sette there is written the last command # executed by sette.sh # # example use: ./sette.sh ######################################################################################### # # LOAD param value SETTE_DIR=$(cd $(dirname "$0"); pwd) MAIN_DIR=$(dirname $SETTE_DIR) export BATCH_COMMAND_PAR=${BATCH_CMD} export BATCH_COMMAND_SEQ=${BATCH_CMD} export INTERACT_FLAG="no" export MPIRUN_FLAG="yes" # # Settings which control the use of stand alone servers (only relevant if using xios) # export NUM_XIOSERVERS=4 export JOB_PREFIX=${JOB_PREFIX_MPMD} # if [ ${USING_MPMD} == "no" ] then export NUM_XIOSERVERS=0 export JOB_PREFIX=${JOB_PREFIX_NOMPMD} fi # # Directory to run the tests CONFIG_DIR0=${MAIN_DIR}/cfgs TOOLS_DIR=${MAIN_DIR}/tools CMP_NAM=${1:-$COMPILER} # Copy job_batch_COMPILER file for specific compiler into job_batch_template cd ${SETTE_DIR} cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template || exit # Description of available configurations: # GYRE_PISCES : # ORCA2_ICE_PISCES : # ORCA2_OFF_PISCES : # AMM12 : # SAS : aka ORCA2_SAS_ICE # ORCA2_ICE_OBS : # AGRIF : AGRIF_DEMO: test AGRIF in a double zoom configuration in the nordic seas + 1 zoom in the eq. Pacific and # AGRIF_DEMO_NOAGRIF: check that key_agrif without zoom = no key_agrif # WED025 : regional configuration including sea-ice and tides (Spitzbergen) . ./all_functions.sh for config in ${TEST_CONFIGS[@]} do # ----------- # GYRE_PISCES # ----------- if [ ${config} == "GYRE_PISCES" ] ; then SETTE_CONFIG="GYRE_PISCES"${SETTE_STG} if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ] then ITEND=12 # 1 day else ITEND=1080 # 90 days fi ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) ) cd ${MAIN_DIR} # # syncronisation if target directory/file exist (not done by makenemo) sync_config GYRE_PISCES ${SETTE_CONFIG} 'cfgs' clean_config GYRE_PISCES ${SETTE_CONFIG} 'cfgs' # # GYRE uses linssh so remove key_qco if added by default . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r GYRE_PISCES -j ${CMPL_CORES} add_key "${ADD_KEYS/key_qco/}" del_key "${DEL_KEYS}" fi if [ ${config} == "GYRE_PISCES" ] && [ ${DO_RESTART} == "1" ] ; then ## Restartability tests for GYRE_PISCES export TEST_NAME="LONG" cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=8 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"GYREPIS_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg ln_linssh .true. set_namelist namelist_cfg jpni 2 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"GYREPIS_SHORT\" set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 )) set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_cfg ln_linssh .true. set_namelist namelist_cfg jpni 2 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_top_cfg ln_rsttr .true. set_namelist namelist_top_cfg nn_rsttr 2 set_namelist namelist_cfg cn_ocerst_in \"GYREPIS_LONG_${ITRST}_restart\" set_namelist namelist_top_cfg cn_trcrst_in \"GYREPIS_LONG_${ITRST}_restart_trc\" set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/GYREPIS_LONG_${ITRST}_restart_${L_NPROC}.nc . ln -sf ../LONG/GYREPIS_LONG_${ITRST}_restart_trc_${L_NPROC}.nc . done cd ${SETTE_DIR} . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi if [ ${config} == "GYRE_PISCES" ] && [ ${DO_REPRO} == "1" ] ; then ## Reproducibility tests for GYRE_PISCES export TEST_NAME="REPRO_2_4" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=8 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"GYREPIS_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg ln_linssh .true. set_namelist namelist_cfg jpni 2 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_4_2" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=8 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"GYREPIS_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg ln_linssh .true. set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 2 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # ----------------- # ORCA2_ICE_PISCES # ----------------- if [ ${config} == "ORCA2_ICE_PISCES" ] ; then SETTE_CONFIG="ORCA2_ICE_PISCES"${SETTE_STG} if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ] then ITEND=16 # 1 day else ITEND=992 # 62 days fi ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) ) cd ${MAIN_DIR} # # syncronisation if target directory/file exist (not done by makenemo) sync_config ORCA2_ICE_PISCES ${SETTE_CONFIG} 'cfgs' clean_config ORCA2_ICE_PISCES ${SETTE_CONFIG} 'cfgs' # . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r ORCA2_ICE_PISCES -j ${CMPL_CORES} add_key "${ADD_KEYS}" del_key "${DEL_KEYS}" fi if [ ${config} == "ORCA2_ICE_PISCES" ] && [ ${DO_RESTART} == "1" ] ; then ## Restartability tests for ORCA2_ICE_PISCES export TEST_NAME="LONG" cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3P_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_use_calving .true. set_namelist namelist_cfg ln_wave .true. set_namelist namelist_cfg ln_cdgw .false. set_namelist namelist_cfg ln_sdw .true. set_namelist namelist_cfg ln_stcor .true. # set_namelist_opt namelist_cfg ln_icebergs ${USING_ICEBERGS} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_nnogather ${USING_NOGATHER} .true. .false. set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0 # set_namelist namelist_ice_cfg ln_icediachk .true. set_namelist namelist_top_cfg ln_trcdta .false. set_namelist namelist_top_cfg ln_trcbc .false. # put ln_ironsed, ln_hydrofe to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3P_SHORT\" set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 )) set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg nn_test_icebergs -1 set_namelist namelist_cfg ln_wave .true. set_namelist namelist_cfg ln_cdgw .false. set_namelist namelist_cfg ln_sdw .true. set_namelist namelist_cfg ln_stcor .true. # set_namelist_opt namelist_cfg ln_icebergs ${USING_ICEBERGS} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_nnogather ${USING_NOGATHER} .true. .false. set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0 # set_namelist namelist_ice_cfg ln_icediachk .true. set_namelist namelist_top_cfg ln_rsttr .true. set_namelist namelist_top_cfg nn_rsttr 2 set_namelist namelist_cfg cn_ocerst_in \"O2L3P_LONG_${ITRST}_restart\" set_namelist namelist_cfg cn_icbrst_in \"O2L3P_LONG_${ITRST}_restart_icb\" set_namelist namelist_top_cfg cn_trcrst_in \"O2L3P_LONG_${ITRST}_restart_trc\" set_namelist namelist_ice_cfg cn_icerst_in \"O2L3P_LONG_${ITRST}_restart_ice\" set_namelist namelist_top_cfg ln_trcbc .false. # put ln_ironsed, ln_hydrofe to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/O2L3P_LONG_${ITRST}_restart_${L_NPROC}.nc . ln -sf ../LONG/O2L3P_LONG_${ITRST}_restart_trc_${L_NPROC}.nc . ln -sf ../LONG/O2L3P_LONG_${ITRST}_restart_ice_${L_NPROC}.nc . if [ ${USING_ICEBERGS} == "yes" ] then ln -sf ../LONG/O2L3P_LONG_${ITRST}_restart_icb_${L_NPROC}.nc O2L3P_LONG_${ITRST}_restart_icb_${L_NPROC}.nc fi done set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi if [ ${config} == "ORCA2_ICE_PISCES" ] && [ ${DO_REPRO} == "1" ] ; then ## Reproducibility tests for ORCA2_ICE_PISCES export TEST_NAME="REPRO_4_8" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3P_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_wave .true. set_namelist namelist_cfg ln_cdgw .false. set_namelist namelist_cfg ln_sdw .true. set_namelist namelist_cfg ln_stcor .true. set_namelist_opt namelist_cfg ln_icebergs ${USING_ICEBERGS} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_nnogather ${USING_NOGATHER} .true. .false. set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0 set_namelist namelist_top_cfg ln_trcdta .false. set_namelist namelist_top_cfg ln_trcbc .false. # put ln_ironsed, ln_hydrofe to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3P_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_wave .true. set_namelist namelist_cfg ln_cdgw .false. set_namelist namelist_cfg ln_sdw .true. set_namelist namelist_cfg ln_stcor .true. set_namelist_opt namelist_cfg ln_icebergs ${USING_ICEBERGS} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_nnogather ${USING_NOGATHER} .true. .false. set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. # for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0 set_namelist namelist_top_cfg ln_trcdta .false. set_namelist namelist_top_cfg ln_trcbc .false. # put ln_ironsed, ln_hydrofe to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # ---------------- # ORCA2_OFF_PISCES # ---------------- if [ ${config} == "ORCA2_OFF_PISCES" ] ; then SETTE_CONFIG="ORCA2_OFF_PISCES"${SETTE_STG} if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ] then ITEND=16 # 4 days else ITEND=380 # 95 days fi ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) ) cd ${MAIN_DIR} # # syncronisation if target directory/file exist (not done by makenemo) sync_config ${SETTE_CONFIG} ORCA2_OFF_PISCES_ST 'cfgs' clean_config ${SETTE_CONFIG} ORCA2_OFF_PISCES_ST 'cfgs' # # ORCA2_OFF_PISCES uses linssh so remove key_qco if added by default . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r ORCA2_OFF_PISCES -j ${CMPL_CORES} add_key "${ADD_KEYS/key_qco/}" del_key "${DEL_KEYS}" fi if [ ${config} == "ORCA2_OFF_PISCES" ] && [ ${DO_RESTART} == "1" ] ; then ## Restartability tests for ORCA2_OFF_PISCES export TEST_NAME="LONG" cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"OFFP_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_qsr_rgb .true. set_namelist namelist_top_cfg ln_trcdta .false. set_namelist namelist_top_cfg ln_trcbc .false. # put ln_ironsed, ln_hydrofe to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"OFFP_SHORT\" set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 )) set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_qsr_rgb .true. set_namelist namelist_top_cfg ln_rsttr .true. set_namelist namelist_top_cfg nn_rsttr 2 set_namelist namelist_top_cfg cn_trcrst_in \"OFFP_LONG_${ITRST}_restart_trc\" for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/OFFP_LONG_${ITRST}_restart_trc_${L_NPROC}.nc . done set_namelist namelist_top_cfg ln_trcbc .false. # put ln_ironsed, ln_hydrofe to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi if [ ${config} == "ORCA2_OFF_PISCES" ] && [ ${DO_REPRO} == "1" ] ; then ## Reproducibility tests for ORCA2_OFF_PISCES export TEST_NAME="REPRO_4_8" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"OFFP_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_qsr_rgb .true. set_namelist namelist_top_cfg ln_trcdta .false. set_namelist namelist_top_cfg ln_trcbc .false. # put ln_ironsed, ln_hydrofe to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"OFFP_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_qsr_rgb .true. set_namelist namelist_top_cfg ln_trcdta .false. set_namelist namelist_top_cfg ln_trcbc .false. # put ln_ironsed, ln_hydrofe to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. # put ln_pisdmp to false : no restoring to global mean value set_namelist namelist_pisces_cfg ln_pisdmp .false. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # ----- # AMM12 # ----- if [ ${config} == "AMM12" ] ; then SETTE_CONFIG="AMM12"${SETTE_STG} if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ] then ITEND=12 # 3 h else ITEND=576 # 4 days fi ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) ) cd ${MAIN_DIR} # # syncronisation if target directory/file exist (not done by makenemo) sync_config AMM12 ${SETTE_CONFIG} 'cfgs' clean_config AMM12 ${SETTE_CONFIG} 'cfgs' # . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r AMM12 -j ${CMPL_CORES} add_key "${ADD_KEYS}" del_key "${DEL_KEYS}" fi if [ ${config} == "AMM12" ] && [ ${DO_RESTART} == "1" ] ; then ## Restartability tests for AMM12 export TEST_NAME="LONG" cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AMM12_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AMM12_SHORT\" set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 )) set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_cfg cn_ocerst_in \"AMM12_LONG_${ITRST}_restart\" set_namelist namelist_cfg nn_date0 20120102 for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/AMM12_LONG_${ITRST}_restart_${L_NPROC}.nc . done set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi if [ ${config} == "AMM12" ] && [ ${DO_REPRO} == "1" ] ; then ## Reproducibility tests for AMM12 export TEST_NAME="REPRO_8_4" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AMM12_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_4_8" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AMM12_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # --------- # ORCA2_SAS_ICE # --------- if [ ${config} == "SAS" ] ; then SETTE_CONFIG="ORCA2_SAS_ICE"${SETTE_STG} if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ] then ITEND=16 # 1 day else ITEND=256 # 16 days fi ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) ) cd ${MAIN_DIR} # # syncronisation if target directory/file exist (not done by makenemo) sync_config ORCA2_SAS_ICE ${SETTE_CONFIG} 'cfgs' clean_config ORCA2_SAS_ICE ${SETTE_CONFIG} 'cfgs' # # ORCA2_SAS_ICE uses linssh so remove key_qco if added by default . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r ORCA2_SAS_ICE -j ${CMPL_CORES} add_key "${ADD_KEYS/key_qco/}" del_key "${DEL_KEYS}" fi if [ ${config} == "SAS" ] && [ ${DO_RESTART} == "1" ] ; then ## Restartability tests export TEST_NAME="LONG" cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"SAS\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_ice_cfg ln_icediachk .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"SAS\" set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 )) set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_cfg nn_date0 010109 set_namelist namelist_cfg cn_ocerst_in \"SAS_${ITRST}_restart\" set_namelist namelist_ice_cfg cn_icerst_in \"SAS_${ITRST}_restart_ice\" set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/SAS_${ITRST}_restart_${L_NPROC}.nc . ln -sf ../LONG/SAS_${ITRST}_restart_ice_${L_NPROC}.nc . done cd ${SETTE_DIR} . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi if [ ${config} == "SAS" ] && [ ${DO_REPRO} == "1" ] ; then ## Reproducibility tests if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ] then ITEND=16 # 1 day else ITEND=80 # 5 days fi export TEST_NAME="REPRO_4_8" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"SAS_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"SAS_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # -------------- # ORCA2_ICE_OBS # -------------- ## Test assimilation interface code, OBS and ASM for reproducibility ## Restartability not tested (ASM code not restartable while increments are being applied) if [ ${config} == "ORCA2_ICE_OBS" ] ; then SETTE_CONFIG="ORCA2_ICE_OBS"${SETTE_STG} ## Reproducibility tests if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ] then ITEND=16 # 1 day else ITEND=80 # 5 days fi cd ${MAIN_DIR} # # syncronisation if target directory/file exist (not done by makenemo) sync_config ORCA2_ICE_PISCES ${SETTE_CONFIG} 'cfgs' clean_config ORCA2_ICE_PISCES ${SETTE_CONFIG} 'cfgs' # . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r ORCA2_ICE_PISCES -d "OCE ICE" -j ${CMPL_CORES} add_key "key_asminc ${ADD_KEYS}" del_key "key_top ${DEL_KEYS}" fi if [ ${config} == "ORCA2_ICE_OBS" ] && [ ${DO_RESTART} == "1" ] ; then ## Reproducibility tests export TEST_NAME="REPRO_4_8" cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3OBS_48\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg ln_read_cfg .true. set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_diaobs .true. set_namelist namelist_cfg ln_t3d .true. set_namelist namelist_cfg ln_s3d .true. set_namelist namelist_cfg ln_sst .true. set_namelist namelist_cfg ln_sla .true. set_namelist namelist_cfg ln_sic .true. set_namelist namelist_cfg ln_vel3d .true. set_namelist namelist_cfg ln_bkgwri .true. set_namelist namelist_cfg ln_trainc .true. set_namelist namelist_cfg ln_dyninc .true. set_namelist namelist_cfg ln_sshinc .true. set_namelist namelist_cfg ln_asmiau .true. #remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration) set_namelist namelist_top_cfg ln_trcdta .false. set_namelist namelist_top_cfg ln_trcbc .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_nnogather ${USING_NOGATHER} .true. .false. set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"O2L3OBS_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg ln_read_cfg .true. set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_diaobs .true. set_namelist namelist_cfg ln_t3d .true. set_namelist namelist_cfg ln_s3d .true. set_namelist namelist_cfg ln_sst .true. set_namelist namelist_cfg ln_sla .true. set_namelist namelist_cfg ln_sic .true. set_namelist namelist_cfg ln_vel3d .true. set_namelist namelist_cfg ln_bkgwri .true. set_namelist namelist_cfg ln_trainc .true. set_namelist namelist_cfg ln_dyninc .true. set_namelist namelist_cfg ln_sshinc .true. set_namelist namelist_cfg ln_asmiau .true. #remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration) set_namelist namelist_top_cfg ln_trcdta .false. set_namelist namelist_top_cfg ln_trcbc .false. # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false # if not you need input files, and for tests is not necessary set_namelist namelist_pisces_cfg ln_varpar .false. set_namelist namelist_pisces_cfg ln_ironsed .false. set_namelist namelist_pisces_cfg ln_ironice .false. set_namelist namelist_pisces_cfg ln_hydrofe .false. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_nnogather ${USING_NOGATHER} .true. .false. set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # ------------ # AGRIF ICE # ----------- if [ ${config} == "AGRIF" ] ; then SETTE_CONFIG="AGRIF_DEMO"${SETTE_STG} if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ] then ITEND=4 # 6h else ITEND=20 # 1d and 6h fi ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) ) ITRST_1=$( printf "%08d" $(( ${ITEND} / 2 )) ) ITRST_2=$( printf "%08d" $(( ${ITEND} * 4 / 2 )) ) ITRST_3=$( printf "%08d" $(( ${ITEND} * 4 * 3 / 2 )) ) cd ${MAIN_DIR} # # syncronisation if target directory/file exist (not done by makenemo) sync_config AGRIF_DEMO ${SETTE_CONFIG} 'cfgs' clean_config AGRIF_DEMO ${SETTE_CONFIG} 'cfgs' # # AGRIF_DEMO does not yet support nn_hls=2 => key_loop_fusion can not be used # . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r AGRIF_DEMO -j ${CMPL_CORES} add_key "${ADD_KEYS/key_loop_fusion}" del_key "${DEL_KEYS}" . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r AGRIF_DEMO -j ${CMPL_CORES} add_key "${ADD_KEYS}" del_key "${DEL_KEYS}" fi if [ ${config} == "AGRIF" ] && [ ${DO_RESTART} == "1" ] ; then ## Restartability tests export TEST_NAME="LONG" cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=16 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AGRIF_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. #set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist 1_namelist_cfg cn_exp \"AGRIF_LONG\" set_namelist 1_namelist_cfg nn_it000 1 set_namelist 1_namelist_cfg nn_itend ${ITEND} set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 2_namelist_cfg cn_exp \"AGRIF_LONG\" set_namelist 2_namelist_cfg nn_it000 1 set_namelist 2_namelist_cfg nn_itend $(( ${ITEND} * 4 )) set_namelist 2_namelist_cfg nn_stock $(( ${ITEND} * 4 / 2 )) set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 3_namelist_cfg cn_exp \"AGRIF_LONG\" set_namelist 3_namelist_cfg nn_it000 1 set_namelist 3_namelist_cfg nn_itend $(( ${ITEND} * 4 * 3 )) set_namelist 3_namelist_cfg nn_stock $(( ${ITEND} * 4 * 3 / 2 )) set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false. set_namelist_opt 2_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 2_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 2_namelist_cfg ln_tile ${USING_TILING} .true. .false. set_namelist_opt 3_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 3_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 3_namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AGRIF_SHORT\" set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 )) set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_top_cfg ln_rsttr .true. set_namelist namelist_top_cfg nn_rsttr 2 #set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist 1_namelist_cfg cn_exp \"AGRIF_SHORT\" set_namelist 1_namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 )) set_namelist 1_namelist_cfg nn_itend ${ITEND} set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 1_namelist_cfg ln_rstart .true. set_namelist 1_namelist_cfg nn_rstctl 2 set_namelist 1_namelist_top_cfg ln_rsttr .true. set_namelist 1_namelist_cfg ln_init_chfrpar .false. set_namelist 1_namelist_top_cfg nn_rsttr 2 set_namelist 2_namelist_cfg cn_exp \"AGRIF_SHORT\" set_namelist 2_namelist_cfg nn_it000 $(( ${ITEND} * 4 / 2 + 1 )) set_namelist 2_namelist_cfg nn_itend $(( ${ITEND} * 4 )) set_namelist 2_namelist_cfg nn_stock $(( ${ITEND} * 4 / 2 )) set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 2_namelist_cfg ln_rstart .true. set_namelist 2_namelist_cfg nn_rstctl 2 set_namelist 2_namelist_cfg ln_init_chfrpar .false. set_namelist 2_namelist_top_cfg ln_rsttr .true. set_namelist 2_namelist_top_cfg nn_rsttr 2 set_namelist 3_namelist_cfg cn_exp \"AGRIF_SHORT\" set_namelist 3_namelist_cfg nn_it000 $(( ${ITEND} * 4 * 3 / 2 + 1 )) set_namelist 3_namelist_cfg nn_itend $(( ${ITEND} * 4 * 3 )) set_namelist 3_namelist_cfg nn_stock $(( ${ITEND} * 4 * 3 / 2 )) set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true. set_namelist 3_namelist_cfg ln_rstart .true. set_namelist 3_namelist_cfg nn_rstctl 2 set_namelist 3_namelist_cfg ln_init_chfrpar .false. set_namelist 3_namelist_top_cfg ln_rsttr .true. set_namelist 3_namelist_top_cfg nn_rsttr 2 set_namelist namelist_cfg cn_ocerst_in \"AGRIF_LONG_${ITRST}_restart\" set_namelist namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_${ITRST}_restart_ice\" set_namelist namelist_top_cfg cn_trcrst_in \"AGRIF_LONG_${ITRST}_restart_trc\" set_namelist 1_namelist_cfg cn_ocerst_in \"AGRIF_LONG_${ITRST_1}_restart\" set_namelist 1_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_${ITRST_1}_restart_ice\" set_namelist 1_namelist_top_cfg cn_trcrst_in \"AGRIF_LONG_${ITRST_1}_restart_trc\" set_namelist 2_namelist_cfg cn_ocerst_in \"AGRIF_LONG_${ITRST_2}_restart\" set_namelist 2_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_${ITRST_2}_restart_ice\" set_namelist 2_namelist_top_cfg cn_trcrst_in \"AGRIF_LONG_${ITRST_2}_restart_trc\" set_namelist 3_namelist_cfg cn_ocerst_in \"AGRIF_LONG_${ITRST_3}_restart\" set_namelist 3_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_${ITRST_3}_restart_ice\" set_namelist 3_namelist_top_cfg cn_trcrst_in \"AGRIF_LONG_${ITRST_3}_restart_trc\" # set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false. set_namelist_opt 2_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 2_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 2_namelist_cfg ln_tile ${USING_TILING} .true. .false. set_namelist_opt 3_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 3_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 3_namelist_cfg ln_tile ${USING_TILING} .true. .false. for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/AGRIF_LONG_${ITRST}_restart_${L_NPROC}.nc . ln -sf ../LONG/AGRIF_LONG_${ITRST}_restart_ice_${L_NPROC}.nc . ln -sf ../LONG/AGRIF_LONG_${ITRST}_restart_trc_${L_NPROC}.nc . ln -sf ../LONG/1_AGRIF_LONG_${ITRST_1}_restart_${L_NPROC}.nc . ln -sf ../LONG/1_AGRIF_LONG_${ITRST_1}_restart_ice_${L_NPROC}.nc . ln -sf ../LONG/1_AGRIF_LONG_${ITRST_1}_restart_trc_${L_NPROC}.nc . ln -sf ../LONG/2_AGRIF_LONG_${ITRST_2}_restart_${L_NPROC}.nc . ln -sf ../LONG/2_AGRIF_LONG_${ITRST_2}_restart_ice_${L_NPROC}.nc . ln -sf ../LONG/2_AGRIF_LONG_${ITRST_2}_restart_trc_${L_NPROC}.nc . ln -sf ../LONG/3_AGRIF_LONG_${ITRST_3}_restart_${L_NPROC}.nc . ln -sf ../LONG/3_AGRIF_LONG_${ITRST_3}_restart_ice_${L_NPROC}.nc . ln -sf ../LONG/3_AGRIF_LONG_${ITRST_3}_restart_trc_${L_NPROC}.nc . done set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi if [ ${config} == "AGRIF" ] && [ ${DO_REPRO} == "1" ] ; then ## Reproducibility tests export TEST_NAME="REPRO_2_8" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=16 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AGRIF_28\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg jpni 2 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. #set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist 1_namelist_cfg cn_exp \"AGRIF_28\" set_namelist 1_namelist_cfg nn_it000 1 set_namelist 1_namelist_cfg nn_itend ${ITEND} set_namelist 1_namelist_cfg jpni 2 set_namelist 1_namelist_cfg jpnj 8 set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false. set_namelist 2_namelist_cfg cn_exp \"AGRIF_28\" set_namelist 2_namelist_cfg nn_it000 1 set_namelist 2_namelist_cfg nn_itend $(( ${ITEND} * 4 )) set_namelist 2_namelist_cfg jpni 2 set_namelist 2_namelist_cfg jpnj 8 set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt 2_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 2_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 2_namelist_cfg ln_tile ${USING_TILING} .true. .false. set_namelist 3_namelist_cfg cn_exp \"AGRIF_28\" set_namelist 3_namelist_cfg nn_it000 1 set_namelist 3_namelist_cfg nn_itend $(( ${ITEND} * 4 * 3 )) set_namelist 3_namelist_cfg jpni 2 set_namelist 3_namelist_cfg jpnj 8 set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt 3_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 3_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 3_namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_4_4" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=16 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"AGRIF_44\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. #set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} set_namelist 1_namelist_cfg cn_exp \"AGRIF_44\" set_namelist 1_namelist_cfg nn_it000 1 set_namelist 1_namelist_cfg nn_itend ${ITEND} set_namelist 1_namelist_cfg jpni 4 set_namelist 1_namelist_cfg jpnj 4 set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false. set_namelist 2_namelist_cfg cn_exp \"AGRIF_44\" set_namelist 2_namelist_cfg nn_it000 1 set_namelist 2_namelist_cfg nn_itend $(( ${ITEND} * 4 )) set_namelist 2_namelist_cfg jpni 4 set_namelist 2_namelist_cfg jpnj 4 set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt 2_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 2_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 2_namelist_cfg ln_tile ${USING_TILING} .true. .false. set_namelist 3_namelist_cfg cn_exp \"AGRIF_44\" set_namelist 3_namelist_cfg nn_it000 1 set_namelist 3_namelist_cfg nn_itend $(( ${ITEND} * 4 * 3 )) set_namelist 3_namelist_cfg jpni 4 set_namelist 3_namelist_cfg jpnj 4 set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt 3_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt 3_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt 3_namelist_cfg ln_tile ${USING_TILING} .true. .false. cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi if [ ${config} == "AGRIF" ] && [ ${DO_CORRUPT} == "1" ] ; then ## test code corruption with AGRIF (phase 1) ==> Compile with key_agrif but run with no zoom if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ] then ITEND=16 # 1d else ITEND=150 # 5d and 9h fi export TEST_NAME="ORCA2" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"ORCA2\" # Use "original" parent grid bathymetry set_namelist namelist_cfg cn_domcfg "'ORCA_R2_zps_domcfg.nc'" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. #set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. # Set the number of fine grids to zero: sed -i "1s/.*/0/" ${EXE_DIR}/AGRIF_FixedGrids.in set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi ## test code corruption with AGRIF (phase 2) ==> Compile without key_agrif (to be compared with AGRIF_DEMO_ST/ORCA2) if [ ${config} == "AGRIF" ] && [ ${DO_CORRUPT} == "1" ] ; then SETTE_CONFIG="AGRIF_DEMO_NOAGRIF"${SETTE_STG} export TEST_NAME="ORCA2" cd ${MAIN_DIR} # # syncronisation if target directory/file exist (not done by makenemo) sync_config AGRIF_DEMO ${SETTE_CONFIG} 'cfgs' clean_config AGRIF_DEMO ${SETTE_CONFIG} 'cfgs' # # AGRIF_DEMO does not yet support nn_hls=2 => key_loop_fusion can not be used . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r AGRIF_DEMO -j ${CMPL_CORES} add_key "${ADD_KEYS/key_loop_fusion}" del_key "key_agrif ${DEL_KEYS}" cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"ORCA2\" # Use "original" parent grid bathymetry set_namelist namelist_cfg cn_domcfg "'ORCA_R2_zps_domcfg.nc'" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg sn_cfctl%l_trcstat .true. #set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. # set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi # ------- # WED025 # ------- if [ ${config} == "WED025" ] ; then SETTE_CONFIG="WED025"${SETTE_STG} if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ] then ITEND=12 # 4h else ITEND=720 # 10 days fi ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) ) cd ${MAIN_DIR} # # syncronisation if target directory/file exist (not done by makenemo) sync_config WED025 ${SETTE_CONFIG} 'cfgs' clean_config WED025 ${SETTE_CONFIG} 'cfgs' # # WED025 uses ln_hpg_isf so remove key_qco if added by default . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r WED025 -j ${CMPL_CORES} add_key "${ADD_KEYS/key_qco/}" del_key "${DEL_KEYS}" fi if [ ${config} == "WED025" ] && [ ${DO_RESTART} == "1" ] ; then ## Restartability tests export TEST_NAME="LONG" cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"WED025_LONG\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg nn_date0 20000115 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. #set_namelist namelist_ice_cfg ln_icediachk .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_WED025.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} export TEST_NAME="SHORT" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"WED025_SHORT\" set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 )) set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 )) set_namelist namelist_cfg ln_rstart .true. set_namelist namelist_cfg nn_rstctl 2 set_namelist namelist_cfg jpni 4 set_namelist namelist_cfg jpnj 8 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist namelist_cfg cn_ocerst_in \"WED025_LONG_${ITRST}_restart\" set_namelist namelist_ice_cfg cn_icerst_in \"WED025_LONG_${ITRST}_restart_ice\" for (( i=1; i<=$NPROC; i++)) ; do L_NPROC=$(( $i - 1 )) L_NPROC=`printf "%04d\n" ${L_NPROC}` ln -sf ../LONG/WED025_LONG_${ITRST}_restart_${L_NPROC}.nc . ln -sf ../LONG/WED025_LONG_${ITRST}_restart_ice_${L_NPROC}.nc . done set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_WED025.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi if [ ${config} == "WED025" ] && [ ${DO_REPRO} == "1" ] ; then ## Reproducibility tests export TEST_NAME="REPRO_5_6" cd ${MAIN_DIR} cd ${SETTE_DIR} . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"WED025_56\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_date0 20000115 set_namelist namelist_cfg jpni 6 set_namelist namelist_cfg jpnj 7 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_WED025.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} cd ${SETTE_DIR} export TEST_NAME="REPRO_8_4" . ./prepare_exe_dir.sh set_valid_dir clean_valid_dir JOB_FILE=${EXE_DIR}/run_job.sh NPROC=32 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi cd ${EXE_DIR} set_namelist namelist_cfg cn_exp \"WED025_84\" set_namelist namelist_cfg nn_it000 1 set_namelist namelist_cfg nn_itend ${ITEND} set_namelist namelist_cfg nn_date0 20000115 set_namelist namelist_cfg jpni 8 set_namelist namelist_cfg jpnj 4 set_namelist namelist_cfg sn_cfctl%l_runstat .true. set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false. set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1 set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1 set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false. set_xio_using_server iodef.xml ${USING_MPMD} cd ${SETTE_DIR} . ./prepare_job.sh input_WED025.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID} cd ${SETTE_DIR} . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} fi done # # Return to SETTE_DIR (last fcm_job.sh will have moved to EXE_DIR) cd ${SETTE_DIR}