source: utils/CI/sette/sette_rpt.sh @ 9663

Last change on this file since 9663 was 9663, checked in by clem, 2 years ago

change the names of the configurations (1st step)

  • Property svn:executable set to *
File size: 13.9 KB
Line 
1#!/bin/bash -f
2# set -vx
3# simple SETTE report generator.
4#
5# This version should be run in the SETTE directory.
6# The machine name will be picked up from the sette.sh script but the location of the
7# validation directory needs to be set here (currently assumed to reside in the ../cfgs directory)
8#
9#########################################################################################
10######################### Start of function definitions #################################
11##
12
13function restfile() {
14# Rebuild ice restart for SAS CONFIG, and restartability checks. Expects LONG and SHORT run directories.
15# For Stand Alone Surface configuration ocean is not running, just run ice model; so no outputs ocean files.
16# Compares LONG rebuild restart ice file with equivalent entry from the SHORT rebuild restart ice file.
17#
18# check nco module loaded, and load it if not
19if [ ! $( echo $LOADEDMODULES | grep cdo ) ]; then module load cdo >& /dev/null ; fi
20#
21  vdir=$1
22  nam=$2
23  pass=$3
24
25#
26  if [ -d $vdir/$nam ]; then
27    dorv=`ls -1rt $vdir/$nam/$mach/ | tail -1l `
28    dorv=`echo $dorv | sed -e 's:.*/::'`
29    rep1=`ls -1rt $vdir/$nam/$mach/$dorv/ | tail -2l | head -1 `
30    rep2=`ls -1rt $vdir/$nam/$mach/$dorv/ | tail -1l`
31    cd ${SAS_RESTART_DIR}/LONG
32    #SF add here compilation of rebuild_tools to rebuild restart files, and add comparison of restart files
33    cd ${TOOLS_DIR}
34    ./maketools -n REBUILD_NEMO -m ${mach} > /dev/null 2>&1
35    cd ${TOOLS_DIR}/REBUILD_NEMO
36    #SF echo "REBUILD LONG restart SAS files, without standard output"
37    ./rebuild_nemo -t 4 ../../cfgs/ORCA2_SAS_ICE_ST/LONG/SAS_00000240_restart_ice  $NPROC > /dev/null 2>&1
38    #SF echo "REBUILD SHORT restart SAS files, without standard output"
39    ./rebuild_nemo -t 4 ../../cfgs/ORCA2_SAS_ICE_ST/SHORT/SAS_00000240_restart_ice $NPROC >&-
40    cd ${SAS_RESTART_DIR}/LONG
41    #SF echo "COPY rebuild restart files"
42    cp SAS_00000240_restart_ice.nc $vdir/$nam/$mach/$dorv/LONG/.
43    cp ../SHORT/SAS_00000240_restart_ice.nc $vdir/$nam/$mach/$dorv/SHORT/.
44
45    f1o=$vdir/$nam/$mach/$dorv/LONG/SAS_00000240_restart_ice.nc
46    f2o=$vdir/$nam/$mach/$dorv/SHORT/SAS_00000240_restart_ice.nc
47    if  [ ! -f $f1o ] &&  [ ! -f $f2o ] ; then
48      printf "%-27s %s\n" $nam " REBUILD SAS restart ice DOES NOT exists; incomplete test";
49      return;
50    fi
51    #
52    done_oce=0
53    #
54  if  [  -f $f1o ] && [  -f $f2o ]; then
55## Compare the two netcdf files
56    cdo diffn $f1o $f2o > cdo_diff.out 2> /dev/null
57## Identical if cdo_diff.out exists but has zero size
58    if [ ! -s cdo_diff.out ]; then
59       difi=0
60    else
61## Identical if first character of $dif ==0
62       dif=$( grep -om1 '[0-9]* of [0-9]* records differ' cdo_diff.out )
63# difi contains the first character of summary of cdo dif. if = 0, then 0 record differ between the 2 files   
64       if [ -n "$dif" ]; then
65           difi=`echo $dif | cut -c -1`
66       fi
67    fi
68    \rm cdo_diff.out
69
70    if [ $difi == 0 ]; then   
71       if [ $pass == 0 ]; then
72         printf "%-27s %s %s\n" $nam  " ice restarts are IDENTICAL  passed : " $dorv
73       fi
74    else
75       printf "%-27s %s %s\n" $nam  " ice restarts are DIFFERENT  FAILED : " $dorv 
76        #
77   # Offer view of differences on the second pass
78   #
79        if [ $pass == 1 ]; then
80          echo "<return> to view restart_ice.nc differences"
81          read y
82          cdo -diffv $f1o $f2o
83          done_oce=1
84          #echo "<return> to continue"
85          #read y
86        fi
87    fi
88  else
89      printf "%-27s %s\n" $nam " incomplete test";
90      return;
91  fi
92#
93fi
94}
95
96function resttest() { 
97#
98# Restartability checks. Expects LONG and SHORT run directories
99# Compares end of LONG stat files with equivalent entries from the SHORT stat files.
100#
101  vdir=$1
102  nam=$2
103  pass=$3
104#
105  if [ -d $vdir/$nam ]; then
106    dorv=`ls -1rt $vdir/$nam/$mach/ | tail -1l `
107    dorv=`echo $dorv | sed -e 's:.*/::'`
108    f1o=$vdir/$nam/$mach/$dorv/LONG/ocean.output
109    f1s=$vdir/$nam/$mach/$dorv/LONG/run.stat
110    f1t=$vdir/$nam/$mach/$dorv/LONG/tracer.stat
111    f2o=$vdir/$nam/$mach/$dorv/SHORT/ocean.output
112    f2s=$vdir/$nam/$mach/$dorv/SHORT/run.stat
113    f2t=$vdir/$nam/$mach/$dorv/SHORT/tracer.stat
114
115    if  [ ! -f $f1s ] &&  [ ! -f $f1t ] ; then
116      printf "%-27s %s\n" $nam " incomplete test";
117      return;
118    fi
119    if  [ ! -f $f2s ] &&  [ ! -f $f2t ] ; then
120      printf "%-27s %s\n" $nam " incomplete test";
121      return;
122    fi
123#
124    done_oce=0
125
126    if  [  -f $f1s ] && [  -f $f2s ]; then
127      nl=(`wc -l $f2s`)
128      tail -${nl[0]} $f1s > f1.tmp$$
129      cmp -s f1.tmp$$ $f2s
130      if [ $? == 0 ]; then
131        if [ $pass == 0 ]; then
132          printf "%-27s %s %s\n" $nam  " run.stat    restartability  passed : " $dorv
133        fi
134      else
135        printf "%-27s %s %s\n" $nam  " run.stat    restartability  FAILED : " $dorv 
136#
137# Offer view of differences on the second pass
138#
139        if [ $pass == 1 ]; then
140          echo "<return> to view run.stat differences"
141          read y
142          sdiff f1.tmp$$ $f2s
143          echo "<return> to view ocean.output differences"
144          read y
145          sdiff $f1o $f2o | grep "|"
146          done_oce=1
147          echo "<return> to continue"
148          read y
149        fi
150      fi
151    fi
152#
153# Check tracer.stat files (if they exist)
154#
155    if  [  -f $f1t ] && [  -f $f2t ]; then
156      nl=(`wc -l $f2t`)
157      tail -${nl[0]} $f1t > f1.tmp$$
158      cmp -s f1.tmp$$ $f2t
159      if [ $? == 0 ]; then
160        if [ $pass == 0 ]; then
161          printf "%-27s %s %s\n" $nam  " tracer.stat restartability  passed : " $dorv
162        fi
163      else
164        printf "%-27s %s %s\n" $nam  " tracer.stat restartability  FAILED : " $dorv 
165#
166# Offer view of differences on the second pass
167#
168        if [ $pass == 1 ]; then
169          echo "<return> to view tracer.stat differences"
170          read y
171          sdiff f1.tmp$$ $f2t
172#
173# Only offer ocean.output view if it has not been viewed previously
174#
175          if [ $done_oce == 0 ]; then
176            echo "<return> to view ocean.output differences"
177            read y
178            sdiff $f1o $f2o | grep "|"
179          fi
180          echo "<return> to continue"
181          read y
182        fi
183      fi
184    fi
185    rm f1.tmp$$
186  fi
187}
188
189function reprotest(){
190#
191# Reproducibility checks. Expects REPRO_N_M and REPRO_I_J run directories
192# Compares end of stat files from each
193#
194  vdir=$1
195  nam=$2
196  pass=$3
197#
198  if [ -d $vdir/$nam ]; then
199    dorv=`ls -1rt $vdir/$nam/$mach/ | tail -1l `
200    dorv=`echo $dorv | sed -e 's:.*/::'`
201    rep1=`ls -1rt $vdir/$nam/$mach/$dorv/ | grep REPRO | tail -2l | head -1 `
202    rep2=`ls -1rt $vdir/$nam/$mach/$dorv/ | grep REPRO | tail -1l`
203    f1o=$vdir/$nam/$mach/$dorv/$rep1/ocean.output
204    f1s=$vdir/$nam/$mach/$dorv/$rep1/run.stat
205    f1t=$vdir/$nam/$mach/$dorv/$rep1/tracer.stat
206    f2o=$vdir/$nam/$mach/$dorv/$rep2/ocean.output
207    f2s=$vdir/$nam/$mach/$dorv/$rep2/run.stat
208    f2t=$vdir/$nam/$mach/$dorv/$rep2/tracer.stat
209
210    if  [ ! -f $f1s ] && [ ! -f $f1t ] ; then
211      printf "%-27s %s\n" $nam " incomplete test";
212      return;
213    fi
214    if  [ ! -f $f2s ] && [ ! -f $f2t ] ; then
215      printf "%-27s %s\n" $nam " incomplete test";
216      return;
217    fi
218#
219    done_oce=0
220
221    if  [ -f $f1s ] && [ -f $f2s ] ; then
222      cmp -s $f1s $f2s
223      if [ $? == 0 ]; then
224        if [ $pass == 0 ]; then
225          printf "%-27s %s %s\n" $nam  " run.stat    reproducibility passed : " $dorv
226        fi
227      else
228        printf "%-27s %s %s\n" $nam  " run.stat    reproducibility FAILED : " $dorv 
229#
230# Offer view of differences on the second pass
231#
232        if [ $pass == 1 ]; then
233          echo "<return> to view run.stat differences"
234          read y
235          sdiff f1.tmp$$ $f2s
236          echo "<return> to view ocean.output differences"
237          read y
238          sdiff $f1o $f2o | grep "|"
239          done_oce=1
240          echo "<return> to continue"
241          read y
242        fi
243      fi
244    fi
245#
246# Check tracer.stat files (if they exist)
247#
248    if  [ -f $f1t ] && [ -f $f2t ] ; then
249      cmp -s $f1t $f2t
250      if [ $? == 0 ]; then
251        if [ $pass == 0 ]; then           printf "%-27s %s %s\n" $nam  " tracer.stat reproducibility passed : " $dorv
252        fi
253      else
254        printf "%-27s %s %s\n" $nam  " tracer.stat reproducibility  FAILED : " $dorv
255#
256# Offer view of differences on the second pass
257#
258        if [ $pass == 1 ]; then
259          echo "<return> to view tracer.stat differences"
260          read y
261          sdiff $f1t $f2t
262#
263# Only offer ocean.output view if it has not been viewed previously
264#
265          if [ $done_oce == 0 ]; then
266            echo "<return> to view ocean.output differences"
267            read y
268            sdiff $f1o $f2o | grep "|"
269          fi
270          echo "<return> to continue"
271          read y
272        fi
273      fi
274    fi
275  fi
276}
277
278function runtest(){
279#
280# Run checks.
281# Check presence of E R R O R in ocean.output from each
282#
283  vdir=$1
284  nam=$2
285  pass=$3
286#
287  if [ -d $vdir/$nam ]; then
288    dorv=`ls -1rt $vdir/$nam/$mach/ | tail -1l `
289    dorv=`echo $dorv | sed -e 's:.*/::'`
290    rep1=`ls -1rt $vdir/$nam/$mach/$dorv/ | grep REPRO | tail -2l | head -1 `
291    f1o=$vdir/$nam/$mach/$dorv/$rep1/ocean.output
292    if  [ ! -f $f1o ] ; then
293      printf "%-27s %s %s\n" $nam " ocean.output is MISSING : " $dorv
294      return;
295    else
296      nerr=`grep 'E R R O R' $f1o | wc -l`
297      if [[ $nerr > 0 ]]; then
298        printf "%-27s %s %s\n" $nam " run FAILED : " $dorv
299        if [ $pass == 1 ]; then
300          echo "<return> to view end of ocean.output"
301          read y
302          tail -100 $f1o
303          echo ''
304          echo "full ocean.output available here: $f1o"
305        fi
306      fi
307    fi
308  else
309    printf "%-27s %s %s\n" $nam  " directory is MISSING : " $dorv
310  fi
311}
312
313function identictest(){
314#
315#  checks AGRIF does not corrupe results with no AGRIF zoom. Expects ORCA2AGUL/AGRIFNOZ and ORCA2AGUL_NAGR/AGRIFNO  run directories
316# Compares solver.stat files for each
317#
318  vdir=$1
319  dir1=$2
320  dir2=$3
321  pass=$4
322#
323  if [ -d $vdir/$dir1 ] && [ -d $vdir/$dir2 ]; then
324    dorv1=`ls -1rt $vdir/$dir1/$mach/ | tail -1l `
325    dorv1=`echo $dorv1 | sed -e 's:.*/::'`
326    dorv2=`ls -1rt $vdir/$dir2/$mach/ | tail -1l `
327    dorv2=`echo $dorv2 | sed -e 's:.*/::'`
328
329    rep1=`ls -1rt $vdir/$dir1/$mach/$dorv1/ |  tail -1l`
330#clem    rep2=`ls -1rt $vdir/$dir2/$mach/$dorv2/ |  tail -1l`
331    rep2=`ls -1rt $vdir/$dir1/$mach/$dorv1/ |  tail -1l`
332    f1s=$vdir/$dir1/$mach/$dorv1/$rep1/run.stat
333    f2s=$vdir/$dir2/$mach/$dorv2/$rep2/run.stat
334
335    if  [ ! -f $f1s ] && [ ! -f $f2s ] ; then
336      printf "%-27s %s\n" $dir1 $dir2 " incomplete test";
337      return;
338    fi
339#
340    done_oce=0
341
342    if  [ -f $f1s ] && [ -f $f2s ] ; then
343      cmp -s $f1s $f2s
344      if [ $? == 0 ]; then
345        if [ $pass == 0 ]; then
346          printf "%-5s %s %-5s %s %s %s\n" $rep1 "AGRIF vs" $rep2 "NOAGRIF run.stat    unchanged  -    passed : " $dorv1 $dorv2
347        fi
348      else
349        printf "%-5s %s %-5s %s %s %s\n" $rep1 "AGRIF vs" $rep2 "NOAGRIF run.stat    changed  -     FAILED : " $dorv1 $dorv2
350#
351# Offer view of differences on the second pass
352#
353        if [ $pass == 1 ]; then
354          echo "<return> to view run.stat differences"
355          read y
356          sdiff $f1s $f2s
357          done_oce=1
358          echo "<return> to continue"
359          read y
360        fi
361      fi
362    fi
363  else
364    printf "%-27s %s\n" $dir1 $dir2 " incomplete test";
365  fi
366}
367########################### END of function definitions #################################
368##                                                                                     ##
369##    Main script                                                                      ##
370##                                                                                     ##
371#########################################################################################
372#
373  mach=`grep "COMPILER=" ./sette.sh | sed -e 's/COMPILER=//'`
374  NEMO_VALID=`grep "NEMO_VALIDATION_DIR=" ./param.cfg | sed -e 's/NEMO_VALIDATION_DIR=//'`
375  NEMO_VALID=`eval "echo $NEMO_VALID"`
376#
377  if [ ! -d $NEMO_VALID ]; then
378    echo "$NEMO_VALID validation directory not found"
379    exit
380  fi
381#
382# Directory to run the tests
383  SETTE_DIR=$(cd $(dirname "$0"); pwd)
384  MAIN_DIR=$SETTE_DIR/../..
385  CONFIG_DIR0=${MAIN_DIR}/cfgs
386  TOOLS_DIR=${MAIN_DIR}/tools
387  NPROC=32
388  SAS_RESTART_DIR=${CONFIG_DIR0}/ORCA2_SAS_ICE_ST
389#
390# Show current revision tag and branch name
391#
392cmd="svn"
393[ ! -d "$MAIN_DIR/.svn" ] && cmd="git $cmd"
394echo $cmd 
395echo "$MAIN_DIR/.svn"
396lastchange=`$cmd info ${MAIN_DIR} | grep -i "Last Changed Rev:" | sed -e "s/ //g" | cut -d ":" -f 2`
397revision=`$cmd info | grep Revision | cut -d ":" -f 2 | tr -d ' '`
398branchname=`$cmd info | grep URL | rev | cut -d "/" -f 3 | rev`
399echo "SETTE validation report : $branchname @ r$revision  ( last change @ r$lastchange )"
400#
401# The script also needs the date or revision tag. Currently this is taken from the latest sub-directory found in each directory
402
403for pass in  0 1
404do
405#
406 if [ $pass == 0 ]; then
407   echo "" 
408   echo "!!---------------1st pass------------------!!"
409 fi
410 if [ $pass == 1 ]; then
411    echo ""
412    echo "!!---------------2nd pass------------------!!"
413 fi
414#
415
416# Rebuild and restartability test for SAS
417# clem: not needed anymore
418# for restart_file in WORCA2_SAS_ICE_ST
419# do
420#   restfile $NEMO_VALID $restart_file $pass
421# done
422#
423# Restartability test
424 echo ""
425 echo "   !----restart----!   "
426 for restart_test in WGYRE_PISCES_ST WORCA2_ICE_PISCES_ST WORCA2_OFF_PISCES_ST WAMM12_ST WORCA2_SAS_ICE_ST WAGRIF_ICE_ST WSPITZ12_ST WISOMIP_ST WOVERFLOW_ST WLOCK_EXCHANGE_ST WVORTEX_ST WWAD_ST WSAS_BIPER_ST
427 do
428   resttest $NEMO_VALID $restart_test $pass
429 done
430#
431# Reproducibility tests
432 echo ""
433 echo "   !----repro----!   "
434 for repro_test in WGYRE_PISCES_ST WORCA2_ICE_PISCES_ST WORCA2_OFF_PISCES_ST WAMM12_ST WORCA2_SAS_ICE_ST WORCA2_ICE_OBS_ST WAGRIF_ICE_ST WSPITZ12_ST WISOMIP_ST
435 do
436   reprotest $NEMO_VALID $repro_test $pass
437   runtest $NEMO_VALID $repro_test $pass
438 done
439
440# AGRIF special check to ensure results are unchanged with and without key_agrif
441 echo ""
442 echo "   !----agrif check----!   "
443 dir1=WAGRIF_ICE_NOAGRIF_ST
444 dir2=WAGRIF_ICE_ST
445 identictest $NEMO_VALID $dir1 $dir2 $pass 
446
447done
448#
449
450exit
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