Ignore:
Timestamp:
2018-11-07T12:04:15+01:00 (2 years ago)
Author:
nicolasmartin
Message:

Various improvments for quick start guide

  • implementation of Rtd theme (Read the Docs) with custom layout and style file
  • add reviewed BibTeX entries for NEMO references with DOI (manuals, guide, development strategy)
  • enhancement of bibliography management and configuration file for guide building
  • standardisation of headings markup
  • numerous edits
File:
1 moved

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  • NEMO/trunk/doc/rst/source/assimilation.rst

    r10258 r10279  
    1 Data assimilation 
    2 ================= 
    3  
    4 .. include:: .global.rst 
     1************************************** 
     2Data assimilation (OBS/SAO, ASM & TAM) 
     3************************************** 
    54 
    65.. contents:: 
     
    1211- TAM the tangent linear and adjoint model. 
    1312 
    14 Please see the `NEMO reference manual`_ for more details including information about the input file formats and 
     13Please see the `NEMO manual`_ for more details including information about the input file formats and 
    1514the namelist settings. 
    1615 
    17 -------------------------------------- 
    1816Observation and model comparison (OBS) 
    19 -------------------------------------- 
     17====================================== 
    2018 
    2119The observation and model comparison code (OBS) reads in observation files (profile temperature and salinity, 
     
    2826To build with the OBS code active ``key_diaobs`` must be set.  
    2927 
    30 More details in the `NEMO reference manual`_ chapter 12. 
     28More details in the `NEMO manual`_ chapter 12. 
    3129 
    3230Standalone observation operator (SAO) 
     
    4341This is a special version of ``nemogcm.F90`` (which doesn't run the model, but reads in the model fields, and 
    4442observations and runs the OBS code. 
    45 See section 12.4 of the `NEMO reference manual`_. 
     43See section 12.4 of the `NEMO manual`_. 
    4644 
    47 ----------------------------------- 
    4845Apply assimilation increments (ASM) 
    49 ----------------------------------- 
     46=================================== 
    5047 
    5148The ASM code adds the functionality to apply increments to the model variables: 
     
    5653To build the ASM code ``key asminc`` must be set. 
    5754 
    58 More details in the `NEMO reference manual`_ chapter 13. 
     55More details in the `NEMO manual`_ chapter 13. 
    5956 
    60 -------------------------------- 
    6157Tangent linear and adjoint (TAM) 
    62 -------------------------------- 
     58================================ 
    6359 
    6460This is the tangent linear and adjoint code of NEMO which is useful to 4D VAR assimilation. 
    65  
    66 .. _NEMO reference manual: http://doi.org/10.5281/zenodo. 
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