Changeset 10843 for NEMO/branches/UKMO/dev_r10037_GPU/cfgs
- Timestamp:
- 2019-04-05T16:01:32+02:00 (5 years ago)
- Location:
- NEMO/branches/UKMO/dev_r10037_GPU/cfgs
- Files:
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- 25 edited
- 5 copied
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AGRIF_DEMO/EXPREF/1_namelist_cfg (modified) (2 diffs)
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AGRIF_DEMO/EXPREF/2_namelist_cfg (modified) (1 diff)
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AGRIF_DEMO/EXPREF/3_namelist_cfg (modified) (1 diff)
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AGRIF_DEMO/EXPREF/namelist_cfg (modified) (2 diffs)
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AGRIF_DEMO/README.rst (copied) (copied from NEMO/branches/UKMO/dev_r9950_GO8_package/cfgs/AGRIF_DEMO/README.rst)
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AGRIF_DEMO/zooms.bib (copied) (copied from NEMO/branches/UKMO/dev_r9950_GO8_package/cfgs/AGRIF_DEMO/zooms.bib)
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AMM12/EXPREF/namelist_cfg (modified) (2 diffs)
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C1D_PAPA/EXPREF/namelist_cfg (modified) (2 diffs)
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C1D_PAPA/MY_SRC/usrdef_hgr.F90 (modified) (1 diff)
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C1D_PAPA/MY_SRC/usrdef_nam.F90 (modified) (1 diff)
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C1D_PAPA/MY_SRC/usrdef_zgr.F90 (modified) (1 diff)
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GYRE_BFM/EXPREF/namelist_cfg (modified) (1 diff)
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GYRE_PISCES/EXPREF/namelist_cfg (modified) (1 diff)
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METO_GO (copied) (copied from NEMO/branches/UKMO/dev_r9950_GO8_package/cfgs/METO_GO)
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ORCA2_ICE_PISCES/EXPREF/context_nemo.xml (modified) (3 diffs)
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ORCA2_ICE_PISCES/EXPREF/namelist_cfg (modified) (4 diffs)
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ORCA2_ICE_PISCES/EXPREF/namelist_pisces_cfg (modified) (1 diff)
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ORCA2_OFF_PISCES/EXPREF/context_nemo.xml (modified) (1 diff)
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ORCA2_OFF_PISCES/EXPREF/namelist_pisces_cfg (modified) (1 diff)
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ORCA2_OFF_TRC/EXPREF/namelist_cfg (modified) (1 diff)
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ORCA2_SAS_ICE/EXPREF/namelist_cfg (modified) (1 diff)
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README.rst (copied) (copied from NEMO/branches/UKMO/dev_r9950_GO8_package/cfgs/README.rst)
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SHARED/README.rst (copied) (copied from NEMO/branches/UKMO/dev_r9950_GO8_package/cfgs/SHARED/README.rst)
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SHARED/field_def_nemo-oce.xml (modified) (3 diffs)
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SHARED/field_def_nemo-pisces.xml (modified) (1 diff)
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SHARED/grid_def_nemo.xml (modified) (1 diff)
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SHARED/namelist_ice_ref (modified) (1 diff)
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SHARED/namelist_pisces_ref (modified) (5 diffs)
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SHARED/namelist_ref (modified) (19 diffs)
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SPITZ12/EXPREF/namelist_cfg (modified) (2 diffs)
Legend:
- Unmodified
- Added
- Removed
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NEMO/branches/UKMO/dev_r10037_GPU/cfgs/AGRIF_DEMO/EXPREF/1_namelist_cfg
r9773 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PAConfiguration namelist : overwrite default values defined in SHARED/namelist_ref2 !! NEMO/OCE Configuration namelist : overwrite default values defined in SHARED/namelist_ref 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 ! AGRIF ICE configuration ! … … 127 127 &namsbc_rnf ! runoffs (ln_rnf =T) 128 128 !----------------------------------------------------------------------- 129 ln_rnf_mouth = .true. ! specific treatment at rivers mouths129 ln_rnf_mouth = .true. ! specific treatment at rivers mouths 130 130 rn_hrnf = 15.e0 ! depth over which enhanced vertical mixing is used (ln_rnf_mouth=T) 131 131 rn_avt_rnf = 1.e-3 ! value of the additional vertical mixing coef. [m2/s] (ln_rnf_mouth=T) -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/AGRIF_DEMO/EXPREF/2_namelist_cfg
r9773 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PAConfiguration namelist : overwrite default values defined in SHARED/1_namelist_ref2 !! NEMO/OCE Configuration namelist : overwrite default values defined in SHARED/1_namelist_ref 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 ! AGRIF ICE configuration ! -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/AGRIF_DEMO/EXPREF/3_namelist_cfg
r9773 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PAConfiguration namelist : overwrite default values defined in SHARED/1_namelist_ref2 !! NEMO/OCE Configuration namelist : overwrite default values defined in SHARED/1_namelist_ref 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 ! AGRIF ICE configuration ! -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/AGRIF_DEMO/EXPREF/namelist_cfg
r9771 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PAConfiguration namelist : overwrite default values defined in SHARED/namelist_ref2 !! NEMO/OCE Configuration namelist : overwrite default values defined in SHARED/namelist_ref 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 ! AGRIF ICE configuration ! … … 127 127 &namsbc_rnf ! runoffs (ln_rnf =T) 128 128 !----------------------------------------------------------------------- 129 ln_rnf_mouth = .true. ! specific treatment at rivers mouths129 ln_rnf_mouth = .true. ! specific treatment at rivers mouths 130 130 rn_hrnf = 15.e0 ! depth over which enhanced vertical mixing is used (ln_rnf_mouth=T) 131 131 rn_avt_rnf = 1.e-3 ! value of the additional vertical mixing coef. [m2/s] (ln_rnf_mouth=T) -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/AMM12/EXPREF/namelist_cfg
r9742 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PAConfiguration namelist : overwrite default values defined in SHARED/namelist_ref2 !! NEMO/OCE Configuration namelist : overwrite default values defined in SHARED/namelist_ref 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 ! AMM12 configuration ! … … 219 219 &namdrg ! top/bottom drag coefficient (default: NO selection) 220 220 !----------------------------------------------------------------------- 221 ln_loglayer = .true. ! logarithmic drag: Cd = vkarmn/log(z/z0) |U|221 ln_loglayer = .true. ! logarithmic drag: Cd = vkarmn/log(z/z0) |U| 222 222 / 223 223 !----------------------------------------------------------------------- -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/C1D_PAPA/EXPREF/namelist_cfg
r9799 r10843 2 2 !! NEMO/OCE : Reference namelist_ref !! 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 !! NEMO/O PA: 1 - Domain & run manager (namrun, namcfg, namdom, namtsd, namcrs, namc1d, namc1d_uvd)4 !! NEMO/OCE : 1 - Domain & run manager (namrun, namcfg, namdom, namtsd, namcrs, namc1d, namc1d_uvd) 5 5 !! namelists 2 - Surface boundary (namsbc, namsbc_flx, namsbc_blk, namsbc_cpl, 6 6 !! namsbc_sas, namtra_qsr, namsbc_rnf, … … 81 81 rn_lat1d = 50 ! Column latitude 82 82 rn_lon1d = -145 ! Column longitude 83 ln_c1d_locpt = .true. ! Localization of 1D config in a grid (T) or independant point (F)83 ln_c1d_locpt = .true. ! Localization of 1D config in a grid (T) or independant point (F) 84 84 / 85 85 !----------------------------------------------------------------------- -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/C1D_PAPA/MY_SRC/usrdef_hgr.F90
r9950 r10843 30 30 !! NEMO/OCE 4.0 , NEMO Consortium (2018) 31 31 !! $Id$ 32 !! Software governed by the CeCILL licen ce (./LICENSE)32 !! Software governed by the CeCILL license (see ./LICENSE) 33 33 !!---------------------------------------------------------------------- 34 34 CONTAINS -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/C1D_PAPA/MY_SRC/usrdef_nam.F90
r9950 r10843 35 35 !! NEMO/OCE 4.0 , NEMO Consortium (2018) 36 36 !! $Id$ 37 !! Software governed by the CeCILL licen ce (./LICENSE)37 !! Software governed by the CeCILL license (see ./LICENSE) 38 38 !!---------------------------------------------------------------------- 39 39 CONTAINS -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/C1D_PAPA/MY_SRC/usrdef_zgr.F90
r9950 r10843 35 35 !! NEMO/OCE 4.0 , NEMO Consortium (2018) 36 36 !! $Id$ 37 !! Software governed by the CeCILL licen ce (./LICENSE)37 !! Software governed by the CeCILL license (see ./LICENSE) 38 38 !!---------------------------------------------------------------------- 39 39 CONTAINS -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/GYRE_BFM/EXPREF/namelist_cfg
r9560 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PA: GYRE Configuration namelist : overwrite reference namelist2 !! NEMO/OCE : GYRE Configuration namelist : overwrite reference namelist 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/GYRE_PISCES/EXPREF/namelist_cfg
r9742 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PAConfiguration namelist : overwrite reference namelist2 !! NEMO/OCE Configuration namelist : overwrite reference namelist 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 !! GYRE PISCES configuration !! -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/ORCA2_ICE_PISCES/EXPREF/context_nemo.xml
r9930 r10843 6 6 <context id="nemo"> 7 7 <!-- $id$ --> 8 <variable_definition>9 <!-- Year of time origin for NetCDF files; defaults to 1800 -->10 <variable id="ref_year" type="int" > 1800 </variable>11 <variable id="rau0" type="float" > 1026.0 </variable>12 <variable id="cpocean" type="float" > 3991.86795711963 </variable>13 <variable id="convSpsu" type="float" > 0.99530670233846 </variable>14 <variable id="rhoic" type="float" > 917.0 </variable>15 <variable id="rhosn" type="float" > 330.0 </variable>16 <variable id="missval" type="float" > 1.e20 </variable>17 </variable_definition>18 8 <!-- Fields definition --> 19 <field_definition src="./field_def_nemo-oce.xml"/> <!-- NEMO ocean dynamics --> 20 <field_definition src="./field_def_nemo-ice.xml"/> <!-- NEMO sea-ice model --> 21 <field_definition src="./field_def_nemo-pisces.xml"/> <!-- NEMO ocean biology --> 9 <field_definition src="./field_def_nemo-oce.xml"/> <!-- NEMO ocean dynamics --> 10 <field_definition src="./field_def_nemo-ice.xml"/> <!-- NEMO sea-ice model --> 11 <field_definition src="./field_def_nemo-pisces.xml"/> <!-- NEMO ocean biology --> 22 12 23 13 <!-- Files definition --> 24 <file_definition src="./file_def_nemo-oce.xml"/> <!-- NEMO ocean dynamics --> 25 <file_definition src="./file_def_nemo-ice.xml"/> <!-- NEMO sea-ice model --> 26 <file_definition src="./file_def_nemo-pisces.xml"/> <!-- NEMO ocean biology --> 14 <file_definition src="./file_def_nemo-oce.xml"/> <!-- NEMO ocean dynamics --> 15 <file_definition src="./file_def_nemo-ice.xml"/> <!-- NEMO sea-ice model --> 16 <file_definition src="./file_def_nemo-pisces.xml"/> <!-- NEMO ocean biology --> 27 17 <!-- 28 18 ============================================================================================================ … … 32 22 33 23 <axis_definition> 34 <axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" /> 35 <axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" /> 36 <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" /> 37 <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" /> 38 <axis id="nfloat" long_name="Float number" unit="-" /> 39 <axis id="icbcla" long_name="Iceberg class" unit="1" /> 40 <axis id="ncatice" long_name="Ice category" unit="1" /> 41 <axis id="iax_20C" long_name="20 degC isotherm" unit="degC" /> 42 <axis id="iax_28C" long_name="28 degC isotherm" unit="degC" /> 24 <axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" /> 25 <axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" /> 26 <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" /> 27 <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" /> 28 <axis id="profsed" long_name="Vertical S levels" unit="cm" positive="down" /> 29 <axis id="nfloat" long_name="Float number" unit="-" /> 30 <axis id="icbcla" long_name="Iceberg class" unit="1" /> 31 <axis id="ncatice" long_name="Ice category" unit="1" /> 32 <axis id="iax_20C" long_name="20 degC isotherm" unit="degC" /> 33 <axis id="iax_28C" long_name="28 degC isotherm" unit="degC" /> 43 34 </axis_definition> 44 35 … … 46 37 47 38 <grid_definition src="./grid_def_nemo.xml"/> 48 39 49 40 </context> -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/ORCA2_ICE_PISCES/EXPREF/namelist_cfg
r9838 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PAConfiguration namelist : overwrite default values defined in SHARED/namelist_ref2 !! NEMO/OCE Configuration namelist : overwrite default values defined in SHARED/namelist_ref 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 !! ORCA2 - ICE - PISCES configuration !! … … 88 88 nn_fwb = 2 ! FreshWater Budget: 89 89 ! ! =2 annual global mean of e-p-r set to zero 90 ln_wave = .false. ! Activate coupling with wave (T => fill namsbc_wave) 91 ln_cdgw = .false. ! Neutral drag coefficient read from wave model (T => ln_wave=.true. & fill namsbc_wave) 92 ln_sdw = .false. ! Read 2D Surf Stokes Drift & Computation of 3D stokes drift (T => ln_wave=.true. & fill namsbc_wave) 93 nn_sdrift = 0 ! Parameterization for the calculation of 3D-Stokes drift from the surface Stokes drift 94 ! ! = 0 Breivik 2015 parameterization: v_z=v_0*[exp(2*k*z)/(1-8*k*z)] 95 ! ! = 1 Phillips: v_z=v_o*[exp(2*k*z)-beta*sqrt(-2*k*pi*z)*erfc(sqrt(-2*k*z))] 96 ! ! = 2 Phillips as (1) but using the wave frequency from a wave model 97 ln_tauwoc = .false. ! Activate ocean stress modified by external wave induced stress (T => ln_wave=.true. & fill namsbc_wave) 98 ln_tauw = .false. ! Activate ocean stress components from wave model 99 ln_stcor = .false. ! Activate Stokes Coriolis term (T => ln_wave=.true. & ln_sdw=.true. & fill namsbc_wave) 90 100 / 91 101 !----------------------------------------------------------------------- … … 135 145 &namsbc_rnf ! runoffs (ln_rnf =T) 136 146 !----------------------------------------------------------------------- 137 ln_rnf_mouth = .true. ! specific treatment at rivers mouths147 ln_rnf_mouth = .true. ! specific treatment at rivers mouths 138 148 rn_hrnf = 15.e0 ! depth over which enhanced vertical mixing is used (ln_rnf_mouth=T) 139 149 rn_avt_rnf = 1.e-3 ! value of the additional vertical mixing coef. [m2/s] (ln_rnf_mouth=T) … … 149 159 sn_t_rnf = 'runoffs' , 24 , 'rotemper', .true. , .true. , 'yearly' , '' , '' , '' 150 160 sn_dep_rnf = 'runoffs' , 0 , 'rodepth' , .false. , .true. , 'yearly' , '' , '' , '' 161 / 162 !----------------------------------------------------------------------- 163 &namsbc_wave ! External fields from wave model (ln_wave=T) 164 !----------------------------------------------------------------------- 151 165 / 152 166 !----------------------------------------------------------------------- -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/ORCA2_ICE_PISCES/EXPREF/namelist_pisces_cfg
r9572 r10843 16 16 / 17 17 !----------------------------------------------------------------------- 18 &namp4z ice! parameters for nutrient limitations for PISCES std - ln_p4z18 &namp4zlim ! parameters for nutrient limitations for PISCES std - ln_p4z 19 19 !----------------------------------------------------------------------- 20 20 / 21 21 !----------------------------------------------------------------------- 22 &namp5z ice! parameters for nutrient limitations PISCES QUOTA - ln_p5z22 &namp5zlim ! parameters for nutrient limitations PISCES QUOTA - ln_p5z 23 23 !----------------------------------------------------------------------- 24 24 / -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/ORCA2_OFF_PISCES/EXPREF/context_nemo.xml
r9930 r10843 23 23 <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" /> 24 24 <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" /> 25 <axis id="profsed" long_name="Vertical S levels" unit="cm" positive="down" /> 25 26 <axis id="nfloat" long_name="Float number" unit="-" /> 26 27 <axis id="icbcla" long_name="Iceberg class" unit="1" /> -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/ORCA2_OFF_PISCES/EXPREF/namelist_pisces_cfg
r9572 r10843 17 17 / 18 18 !----------------------------------------------------------------------- 19 &namp4z ice! parameters for nutrient limitations for PISCES std - ln_p4z19 &namp4zlim ! parameters for nutrient limitations for PISCES std - ln_p4z 20 20 !----------------------------------------------------------------------- 21 21 / 22 22 !----------------------------------------------------------------------- 23 &namp5z ice! parameters for nutrient limitations PISCES QUOTA - ln_p5z23 &namp5zlim ! parameters for nutrient limitations PISCES QUOTA - ln_p5z 24 24 !----------------------------------------------------------------------- 25 25 / -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/ORCA2_OFF_TRC/EXPREF/namelist_cfg
r9742 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PAConfiguration namelist : overwrite default values defined in SHARED/namelist_ref2 !! NEMO/OCE Configuration namelist : overwrite default values defined in SHARED/namelist_ref 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 !! ORCA2 - OFF - TRC configuration !! -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/ORCA2_SAS_ICE/EXPREF/namelist_cfg
r9742 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PAConfiguration namelist : overwrite default values defined in SHARED/namelist_ref2 !! NEMO/OCE Configuration namelist : overwrite default values defined in SHARED/namelist_ref 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 !! ORCA2-ICE (with SAS) configuration !! -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/SHARED/field_def_nemo-oce.xml
r10011 r10843 62 62 <field id="mldr10_1max" long_name="Max of Mixed Layer Depth (dsigma = 0.01 wrt 10m)" field_ref="mldr10_1" operation="maximum" /> 63 63 <field id="mldr10_1min" long_name="Min of Mixed Layer Depth (dsigma = 0.01 wrt 10m)" field_ref="mldr10_1" operation="minimum" /> 64 <field id="mldzint_1" long_name="Mixed Layer Depth interpolated" standard_name="ocean_mixed_layer_thickness" unit="m" /> 65 <field id="mldzint_2" long_name="Mixed Layer Depth interpolated" standard_name="ocean_mixed_layer_thickness" unit="m" /> 66 <field id="mldzint_3" long_name="Mixed Layer Depth interpolated" standard_name="ocean_mixed_layer_thickness" unit="m" /> 67 <field id="mldzint_4" long_name="Mixed Layer Depth interpolated" standard_name="ocean_mixed_layer_thickness" unit="m" /> 68 <field id="mldzint_5" long_name="Mixed Layer Depth interpolated" standard_name="ocean_mixed_layer_thickness" unit="m" /> 69 <field id="mldhtc_1" long_name="Mixed Layer Depth integrated heat content" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" /> 70 <field id="mldhtc_2" long_name="Mixed Layer Depth integrated heat content" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" /> 71 <field id="mldhtc_3" long_name="Mixed Layer Depth integrated heat content" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" /> 72 <field id="mldhtc_4" long_name="Mixed Layer Depth integrated heat content" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" /> 73 <field id="mldhtc_5" long_name="Mixed Layer Depth integrated heat content" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" /> 64 74 <field id="heatc" long_name="Heat content vertically integrated" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" /> 65 75 <field id="saltc" long_name="Salt content vertically integrated" unit="1e-3*kg/m2" /> … … 345 355 <field id="uoce" long_name="ocean current along i-axis" standard_name="sea_water_x_velocity" unit="m/s" grid_ref="grid_U_3D" /> 346 356 <field id="uoce_e3u" long_name="ocean current along i-axis (thickness weighted)" unit="m/s" grid_ref="grid_U_3D" > uoce * e3u </field> 357 <field id="uoce2_e3u" long_name="ocean current along i-axis squared (thickness weighted)" unit="m3/s2" grid_ref="grid_U_3D" > uoce * uoce * e3u </field> 347 358 <field id="ssu" long_name="ocean surface current along i-axis" unit="m/s" /> 348 359 <field id="sbu" long_name="ocean bottom current along i-axis" unit="m/s" /> … … 399 410 <field id="voce" long_name="ocean current along j-axis" standard_name="sea_water_y_velocity" unit="m/s" grid_ref="grid_V_3D" /> 400 411 <field id="voce_e3v" long_name="ocean current along j-axis (thickness weighted)" unit="m/s" grid_ref="grid_V_3D" > voce * e3v </field> 412 <field id="voce2_e3v" long_name="ocean current along j-axis squared (thickness weighted)" unit="m3/s2" grid_ref="grid_V_3D" > voce * voce * e3v </field> 401 413 <field id="ssv" long_name="ocean surface current along j-axis" unit="m/s" /> 402 414 <field id="sbv" long_name="ocean bottom current along j-axis" unit="m/s" /> -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/SHARED/field_def_nemo-pisces.xml
r9539 r10843 115 115 116 116 </field_group> 117 118 <!-- SEDIMENT variables on T sediment grid --> 119 <field_group id="sed_T" grid_ref="grid_T_3DS"> 120 <field id="SedDIC" long_name="Dissolved inorganic Concentration" unit="mmol/m3" /> 121 <field id="SedAlkalini" long_name="Total Alkalinity Concentration" unit="mmol/m3" /> 122 <field id="SedO2" long_name="Oxygen Concentration" unit="mmol/m3" /> 123 <field id="SedCaCO3" long_name="Calcite Concentration" unit="%" /> 124 <field id="SedPOS" long_name="Semi-ref POC Concentration" unit="%" /> 125 <field id="SedPOR" long_name="Refractory POC Concentration" unit="%" /> 126 <field id="SedPO4" long_name="Phosphate Concentration" unit="mmol/m3" /> 127 <field id="SedPOC" long_name="Labile POC Concentration" unit="%" /> 128 <field id="SedSil" long_name="Silicate Concentration" unit="mmol/m3" /> 129 <field id="SedFe2" long_name="Fe2+ Concentration" unit="mmol/m3" /> 130 <field id="SedBSi" long_name="Biogenic Silicate Concentration" unit="%" /> 131 <field id="SedNO3" long_name="Nitrate Concentration" unit="mmol/m3" /> 132 <field id="SedNH4" long_name="Ammonium Concentration" unit="mmol/m3" /> 133 <field id="SedH2S" long_name="H2S Concentration" unit="mmol/m3" /> 134 <field id="SedSO4" long_name="SO4 Concentration" unit="mmol/m3" /> 135 <field id="SedClay" long_name="Clay Concentration" unit="%" /> 136 <field id="SedFeO" long_name="Fe(OH)3 Concentration" unit="%" /> 137 <field id="SedFeS" long_name="FeS Concentration" unit="%" /> 138 <field id="SedpH" long_name="PH" unit="1" /> 139 <field id="SedCO3por" long_name="Bicarbonates" unit="mol/m3" /> 140 </field_group> 141 142 <!-- SEDIMENT additional variables on T sediment grid --> 143 <field_group id="Diag_S" grid_ref="grid_T_2D"> 144 <field id="FlxSi" long_name="Si sediment flux" unit="mol/cm2/s" /> 145 <field id="FlxO2" long_name="O2 sediment flux" unit="mol/cm2/s" /> 146 <field id="FlxDIC" long_name="DIC sediment flux" unit="mol/cm2/s" /> 147 <field id="FlxNO3" long_name="NO3 sediment flux" unit="mol/cm2/s" /> 148 <field id="FlxPO4" long_name="PO4 sediment flux" unit="mol/cm2/s" /> 149 <field id="FlxAlkalini" long_name="Alkalinity sediment flux" unit="mol/cm2/s" /> 150 <field id="FlxNH4" long_name="Ammonium sediment flux" unit="mol/cm2/s" /> 151 <field id="FlxH2S" long_name="H2S sediment flux" unit="mol/cm2/s" /> 152 <field id="FlxSO4" long_name="SO4 sediment flux" unit="mol/cm2/s" /> 153 <field id="FlxFe2" long_name="Fe2+ sediment flux" unit="mol/cm2/s" /> 154 <field id="Flxtot" long_name="Sediment net burial rate" unit="cm/s" /> 155 <field id="dzdep" long_name="Sedimentation rate" unit="cm/s" /> 156 <field id="sflxclay" long_name="Clay sedimentation rate" unit="g/m2/s" /> 157 <field id="sflxcal" long_name="Calcite sedimentation rate" unit="mol/m2/s" /> 158 <field id="sflxbsi" long_name="BSi Sedimentation rate" unit="mol/m2/s" /> 159 <field id="sflxpoc" long_name="POC Sedimentation rate" unit="mol/m2/s" /> 160 <field id="sflxfeo" long_name="Fe(OH)3 Sedimentation rate" unit="mol/m2/s" /> 161 </field_group> 117 162 118 163 <!-- PISCES additional diagnostics on T grid --> -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/SHARED/grid_def_nemo.xml
r9930 r10843 15 15 <domain id="grid_T" /> 16 16 <axis id="deptht" /> 17 </grid> 18 <!-- --> 19 <grid id="grid_T_3DS" > 20 <domain id="grid_T" /> 21 <axis id="profsed" /> 17 22 </grid> 18 23 <!-- --> -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/SHARED/namelist_ice_ref
r9801 r10843 205 205 sn_tmi = 'Ice_initialization' , -12 ,'tmi' , .false. , .true., 'yearly' , '' , '', '' 206 206 sn_smi = 'Ice_initialization' , -12 ,'smi' , .false. , .true., 'yearly' , '' , '', '' 207 cn_dir ='./'207 cn_dir ='./' 208 208 / 209 209 !------------------------------------------------------------------------------ -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/SHARED/namelist_pisces_ref
r9572 r10843 17 17 ln_p5z = .false. ! PISCES QUOTA model used 18 18 ln_ligand = .false. ! Enable organic ligands 19 ln_sediment = .false. ! Enable sediment module 19 20 / 20 21 !----------------------------------------------------------------------- … … 49 50 wsbio2 = 50. ! Big particles sinking speed 50 51 wsbio2max = 50. ! Big particles maximum sinking speed 51 wsbio2scale = 5000. ! Big particles length scale of sinking52 wsbio2scale = 5000. ! Big particles length scale of sinking 52 53 niter1max = 1 ! Maximum number of iterations for POC 53 54 niter2max = 2 ! Maximum number of iterations for GOC … … 62 63 / 63 64 !----------------------------------------------------------------------- 64 &namp4z ice! parameters for nutrient limitations for PISCES std - ln_p4z65 &namp4zlim ! parameters for nutrient limitations for PISCES std - ln_p4z 65 66 !----------------------------------------------------------------------- 66 67 concnno3 = 1.e-6 ! Nitrate half saturation of nanophytoplankton … … 86 87 / 87 88 !----------------------------------------------------------------------- 88 &namp5z ice! parameters for nutrient limitations PISCES QUOTA - ln_p5z89 &namp5zlim ! parameters for nutrient limitations PISCES QUOTA - ln_p5z 89 90 !----------------------------------------------------------------------- 90 91 concnno3 = 3e-6 ! Nitrate half saturation of nanophytoplankton … … 370 371 ln_hydrofe = .false. ! boolean for from hydrothermal vents 371 372 sedfeinput = 2.e-9 ! Coastal release of Iron 373 distcoast = 5.e3 ! Distance off the coast for Iron from sediments 372 374 dustsolub = 0.02 ! Solubility of the dusta 373 375 mfrac = 0.035 ! Fe mineral fraction of dust -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/SHARED/namelist_ref
r9950 r10843 2 2 !! NEMO/OCE : Reference namelist_ref !! 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 !! NEMO/O PA: 1 - Domain & run manager (namrun, namcfg, namdom, namtsd, namcrs, namc1d, namc1d_uvd)4 !! NEMO/OCE : 1 - Domain & run manager (namrun, namcfg, namdom, namtsd, namcrs, namc1d, namc1d_uvd) 5 5 !! namelists 2 - Surface boundary (namsbc, namsbc_flx, namsbc_blk, namsbc_cpl, 6 6 !! namsbc_sas, namtra_qsr, namsbc_rnf, … … 50 50 cn_ocerst_indir = "." ! directory from which to read input ocean restarts 51 51 cn_ocerst_out = "restart" ! suffix of ocean restart name (output) 52 cn_ocerst_outdir = "." ! directory in which to write output ocean restarts52 cn_ocerst_outdir = "." ! directory in which to write output ocean restarts 53 53 ln_iscpl = .false. ! cavity evolution forcing or coupling to ice sheet model 54 54 nn_istate = 0 ! output the initial state (1) or not (0) … … 90 90 ! ! If closea_mask field doesn't exist in the domain_cfg file 91 91 ! ! then this logical does nothing. 92 ln_write_cfg = .false. ! (=T) create the domain configuration file92 ln_write_cfg = .false. ! (=T) create the domain configuration file 93 93 cn_domcfg_out = "domain_cfg_out" ! newly created domain configuration filename 94 94 ! … … 116 116 ln_wd_dl = .false. ! T/F activation of directional limiter 117 117 ln_wd_dl_bc = .false. ! T/F Directional limiteer Baroclinic option 118 ln_wd_dl_rmp = .false. ! T/F Turn on directional limiter ramp118 ln_wd_dl_rmp = .false. ! T/F Turn on directional limiter ramp 119 119 rn_wdmin0 = 0.30 ! depth at which WaD starts 120 120 rn_wdmin1 = 0.2 ! Minimum wet depth on dried cells … … 143 143 rn_lat1d = 50 ! Column latitude 144 144 rn_lon1d = -145 ! Column longitude 145 ln_c1d_locpt = .true. ! Localization of 1D config in a grid (T) or independant point (F)145 ln_c1d_locpt = .true. ! Localization of 1D config in a grid (T) or independant point (F) 146 146 / 147 147 !----------------------------------------------------------------------- … … 248 248 ! ! bulk algorithm : 249 249 ln_NCAR = .false. ! "NCAR" algorithm (Large and Yeager 2008) 250 ln_COARE_3p0 = .false. ! "COARE 3.0" algorithm (Fairall et al. 2003)251 ln_COARE_3p5 = .false. ! "COARE 3.5" algorithm (Edson et al. 2013)250 ln_COARE_3p0 = .false. ! "COARE 3.0" algorithm (Fairall et al. 2003) 251 ln_COARE_3p5 = .false. ! "COARE 3.5" algorithm (Edson et al. 2013) 252 252 ln_ECMWF = .false. ! "ECMWF" algorithm (IFS cycle 31) 253 253 ! … … 398 398 &namsbc_rnf ! runoffs (ln_rnf =T) 399 399 !----------------------------------------------------------------------- 400 ln_rnf_mouth = .false. ! specific treatment at rivers mouths400 ln_rnf_mouth = .false. ! specific treatment at rivers mouths 401 401 rn_hrnf = 15.e0 ! depth over which enhanced vertical mixing is used (ln_rnf_mouth=T) 402 402 rn_avt_rnf = 1.e-3 ! value of the additional vertical mixing coef. [m2/s] (ln_rnf_mouth=T) 403 403 rn_rfact = 1.e0 ! multiplicative factor for runoff 404 ln_rnf_depth = .false. ! read in depth information for runoff404 ln_rnf_depth = .false. ! read in depth information for runoff 405 405 ln_rnf_tem = .false. ! read in temperature information for runoff 406 406 ln_rnf_sal = .false. ! read in salinity information for runoff … … 462 462 sn_rnfisf = 'rnfisf' , -12 ,'sofwfisf' , .false. , .true. , 'yearly' , '' , '' , '' 463 463 !* nn_isf = 2 and 3 cases 464 sn_depmax_isf ='rnfisf' , -12 ,'sozisfmax', .false. , .true. , 'yearly' , '' , '' , ''465 sn_depmin_isf ='rnfisf' , -12 ,'sozisfmin', .false. , .true. , 'yearly' , '' , '' , ''464 sn_depmax_isf ='rnfisf' , -12 ,'sozisfmax', .false. , .true. , 'yearly' , '' , '' , '' 465 sn_depmin_isf ='rnfisf' , -12 ,'sozisfmin', .false. , .true. , 'yearly' , '' , '' , '' 466 466 !* nn_isf = 2 case 467 467 sn_Leff_isf = 'rnfisf' , -12 ,'Leff' , .false. , .true. , 'yearly' , '' , '' , '' … … 481 481 ! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask ! 482 482 ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename ! 483 sn_cdg = 'sdw_ wave' , 1 , 'drag_coeff' , .true. , .false., 'daily' , '', '' , ''484 sn_usd = 'sdw_ wave' , 1 , 'u_sd2d' , .true. , .false., 'daily' , '', '' , ''485 sn_vsd = 'sdw_ wave' , 1 , 'v_sd2d' , .true. , .false., 'daily' , '', '' , ''486 sn_hsw = 'sdw_ wave' , 1 , 'hs' , .true. , .false., 'daily' , '', '' , ''487 sn_wmp = 'sdw_ wave' , 1 , 'wmp' , .true. , .false., 'daily' , '', '' , ''488 sn_wfr = 'sdw_ wave' , 1 , 'wfr' , .true. , .false., 'daily' , '', '' , ''489 sn_wnum = 'sdw_ wave' , 1 , 'wave_num' , .true. , .false., 'daily' , '', '' , ''490 sn_tauwoc = 'sdw_ wave' , 1 , 'wave_stress', .true. , .false., 'daily' , '', '' , ''491 sn_tauwx = 'sdw_ wave' , 1 , 'wave_stress', .true. , .false., 'daily' , '', '' , ''492 sn_tauwy = 'sdw_ wave' , 1 , 'wave_stress', .true. , .false., 'daily' , '', '' , ''483 sn_cdg = 'sdw_ecwaves_orca2' , 6 , 'drag_coeff' , .true. , .true. , 'yearly' , '' , '' , '' 484 sn_usd = 'sdw_ecwaves_orca2' , 6 , 'u_sd2d' , .true. , .true. , 'yearly' , '' , '' , '' 485 sn_vsd = 'sdw_ecwaves_orca2' , 6 , 'v_sd2d' , .true. , .true. , 'yearly' , '' , '' , '' 486 sn_hsw = 'sdw_ecwaves_orca2' , 6 , 'hs' , .true. , .true. , 'yearly' , '' , '' , '' 487 sn_wmp = 'sdw_ecwaves_orca2' , 6 , 'wmp' , .true. , .true. , 'yearly' , '' , '' , '' 488 sn_wfr = 'sdw_ecwaves_orca2' , 6 , 'wfr' , .true. , .true. , 'yearly' , '' , '' , '' 489 sn_wnum = 'sdw_ecwaves_orca2' , 6 , 'wave_num' , .true. , .true. , 'yearly' , '' , '' , '' 490 sn_tauwoc = 'sdw_ecwaves_orca2' , 6 , 'wave_stress', .true. , .true. , 'yearly' , '' , '' , '' 491 sn_tauwx = 'sdw_ecwaves_orca2' , 6 , 'wave_stress', .true. , .true. , 'yearly' , '' , '' , '' 492 sn_tauwy = 'sdw_ecwaves_orca2' , 6 , 'wave_stress', .true. , .true. , 'yearly' , '' , '' , '' 493 493 / 494 494 !----------------------------------------------------------------------- … … 581 581 cn_coords_file = 'coordinates.bdy.nc' ! bdy coordinates files 582 582 ln_mask_file = .false. ! =T : read mask from file 583 cn_mask_file = '' ! name of mask file (if ln_mask_file=.TRUE.)583 cn_mask_file = '' ! name of mask file (if ln_mask_file=.TRUE.) 584 584 cn_dyn2d = 'none' ! 585 585 nn_dyn2d_dta = 0 ! = 0, bdy data are equal to the initial state … … 603 603 ln_dyn3d_dmp =.false. ! open boundary condition for baroclinic velocities 604 604 rn_time_dmp = 1. ! Damping time scale in days 605 rn_time_dmp_out = 1. ! Outflow damping time scale605 rn_time_dmp_out = 1. ! Outflow damping time scale 606 606 nn_rimwidth = 10 ! width of the relaxation zone 607 607 ln_vol = .false. ! total volume correction (see nn_volctl parameter) … … 794 794 nn_mld_uv = 0 ! space interpolation of MLD at u- & v-pts (0=min,1=averaged,2=max) 795 795 nn_conv = 0 ! =1 no MLE in case of convection ; =0 always MLE 796 rn_rho_c_mle = 0.01 ! delta rho criterion used to calculate MLD for FK796 rn_rho_c_mle = 0.01 ! delta rho criterion used to calculate MLD for FK 797 797 / 798 798 !----------------------------------------------------------------------- … … 857 857 ln_dynadv_vec = .false. ! vector form - 2nd centered scheme 858 858 nn_dynkeg = 0 ! grad(KE) scheme: =0 C2 ; =1 Hollingsworth correction 859 ln_dynadv_cen2 = .false. ! flux form - 2nd order centered scheme859 ln_dynadv_cen2 = .false. ! flux form - 2nd order centered scheme 860 860 ln_dynadv_ubs = .false. ! flux form - 3rd order UBS scheme 861 861 / … … 1154 1154 ! ! or computed with Blanke' scheme (F) 1155 1155 ln_ariane = .true. ! Input with Ariane tool convention(T) 1156 ln_flo_ascii = .true. ! Output with Ariane tool netcdf convention(F) or ascii file (T)1156 ln_flo_ascii = .true. ! Output with Ariane tool netcdf convention(F) or ascii file (T) 1157 1157 / 1158 1158 !----------------------------------------------------------------------- … … 1170 1170 nn_dct = 15 ! time step frequency for transports computing 1171 1171 nn_dctwri = 15 ! time step frequency for transports writing 1172 nn_secdebug = 112 ! 0 : no section to debug1172 nn_secdebug = 112 ! 0 : no section to debug 1173 1173 ! ! -1 : debug all section 1174 1174 ! ! 0 < n : debug section number n … … 1187 1187 &namnc4 ! netcdf4 chunking and compression settings ("key_netcdf4") 1188 1188 !----------------------------------------------------------------------- 1189 nn_nchunks_i = 4 ! number of chunks in i-dimension1190 nn_nchunks_j = 4 ! number of chunks in j-dimension1191 nn_nchunks_k = 31 ! number of chunks in k-dimension1189 nn_nchunks_i = 4 ! number of chunks in i-dimension 1190 nn_nchunks_j = 4 ! number of chunks in j-dimension 1191 nn_nchunks_k = 31 ! number of chunks in k-dimension 1192 1192 ! ! setting nn_nchunks_k = jpk will give a chunk size of 1 in the vertical which 1193 1193 ! ! is optimal for postprocessing which works exclusively with horizontal slabs … … 1236 1236 cn_altbiasfile = 'altbias.nc' ! Altimeter bias input file name 1237 1237 cn_sstbiasfiles = 'sstbias.nc' ! SST bias input file name 1238 cn_gridsearchfile ='gridsearch.nc' ! Grid search file name1238 cn_gridsearchfile ='gridsearch.nc' ! Grid search file name 1239 1239 rn_gridsearchres = 0.5 ! Grid search resolution 1240 1240 rn_mdtcorr = 1.61 ! MDT correction … … 1292 1292 ! ! buffer blocking send or immediate non-blocking sends, resp. 1293 1293 nn_buffer = 0 ! size in bytes of exported buffer ('B' case), 0 no exportation 1294 ln_nnogather = .false. ! activate code to avoid mpi_allgather use at the northfold1294 ln_nnogather = .false. ! activate code to avoid mpi_allgather use at the northfold 1295 1295 jpni = 0 ! jpni number of processors following i (set automatically if < 1) 1296 1296 jpnj = 0 ! jpnj number of processors following j (set automatically if < 1) … … 1316 1316 ln_sto_eos = .false. ! stochastic equation of state 1317 1317 nn_sto_eos = 1 ! number of independent random walks 1318 rn_eos_stdxy = 1.4 ! random walk horz. standard deviation (in grid points)1318 rn_eos_stdxy = 1.4 ! random walk horz. standard deviation (in grid points) 1319 1319 rn_eos_stdz = 0.7 ! random walk vert. standard deviation (in grid points) 1320 1320 rn_eos_tcor = 1440. ! random walk time correlation (in timesteps) -
NEMO/branches/UKMO/dev_r10037_GPU/cfgs/SPITZ12/EXPREF/namelist_cfg
r9793 r10843 1 1 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2 !! NEMO/O PAConfiguration namelist : overwrite default values defined in SHARED/namelist_ref2 !! NEMO/OCE Configuration namelist : overwrite default values defined in SHARED/namelist_ref 3 3 !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4 4 !! SPITZ 1/12 configuration !! … … 390 390 &namnc4 ! netcdf4 chunking and compression settings ("key_netcdf4") 391 391 !----------------------------------------------------------------------- 392 nn_nchunks_k = 75 ! number of chunks in k-dimension392 nn_nchunks_k = 75 ! number of chunks in k-dimension 393 393 ! ! setting nn_nchunks_k = jpk will give a chunk size of 1 in the vertical which 394 394 ! ! is optimal for postprocessing which works exclusively with horizontal slabs
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