Changeset 11263 for NEMO/branches/2019/dev_r10984_HPC-13_IRRMANN_BDY_optimization/doc/latex/NEMO/subfiles/chap_LBC.tex

Timestamp:

2019-07-12T12:47:53+02:00 (5 years ago)

Author:

smasson

Message:

dev_r10984_HPC-13 : merge with trunk@11242, see #2285

Location:

NEMO/branches/2019/dev_r10984_HPC-13_IRRMANN_BDY_optimization/doc

Files:

• . (modified) (1 prop)
• latex (modified) (1 prop)
• latex/NEMO (modified) (1 prop)
• latex/NEMO/subfiles/chap_LBC.tex (modified) (18 diffs)

NEMO/branches/2019/dev_r10984_HPC-13_IRRMANN_BDY_optimization/doc/latex

@@ -1 @@
-*.aux
-*.bbl
-*.blg
-*.dvi
-*.fdb*
-*.fls
-*.idx
-*.ilg
-*.ind
-*.log
-*.maf
-*.mtc*
-*.out
-*.pdf
-*.toc
-_minted-*
+figures

@@ -1 @@
-*.aux
-*.bbl
-*.blg
-*.dvi
-*.fdb*
-*.fls
-*.idx
-*.ilg
-*.ind
-*.log
-*.maf
-*.mtc*
-*.out
-*.pdf
-*.toc
-_minted-*
+figures

NEMO/branches/2019/dev_r10984_HPC-13_IRRMANN_BDY_optimization/doc/latex/NEMO/subfiles/chap_LBC.tex

@@ -17 +17 @@
 % Boundary Condition at the Coast
 % ================================================================
-\section{Boundary condition at the coast (\protect\np{rn\_shlat})}
+\section[Boundary condition at the coast (\texttt{rn\_shlat})]
+{Boundary condition at the coast (\protect\np{rn\_shlat})}
 \label{sec:LBC_coast}
 %--------------------------------------------nam_lbc-------------------------------------------------------
@@ -56 +57 @@
 \begin{figure}[!t]
   \begin{center}
-    \includegraphics[width=0.90\textwidth]{Fig_LBC_uv}
+    \includegraphics[width=\textwidth]{Fig_LBC_uv}
     \caption{
       \protect\label{fig:LBC_uv}
@@ -85 +86 @@
 \begin{figure}[!p]
   \begin{center}
-    \includegraphics[width=0.90\textwidth]{Fig_LBC_shlat}
+    \includegraphics[width=\textwidth]{Fig_LBC_shlat}
     \caption{
       \protect\label{fig:LBC_shlat}
@@ -147 +148 @@
 % Boundary Condition around the Model Domain
 % ================================================================
-\section{Model domain boundary condition (\protect\np{jperio})}
+\section[Model domain boundary condition (\texttt{jperio})]
+{Model domain boundary condition (\protect\np{jperio})}
 \label{sec:LBC_jperio}
 
@@ -158 +160 @@
 %        Closed, cyclic (\np{jperio}\forcode{ = 0..2}) 
 % -------------------------------------------------------------------------------------------------------------
-\subsection{Closed, cyclic (\protect\np{jperio}\forcode{= [0127]})}
+\subsection[Closed, cyclic (\forcode{jperio = [0127]})]
+{Closed, cyclic (\protect\np{jperio}\forcode{ = [0127]})}
 \label{subsec:LBC_jperio012}
 
@@ -194 +197 @@
 \begin{figure}[!t]
   \begin{center}
-    \includegraphics[width=1.0\textwidth]{Fig_LBC_jperio}
+    \includegraphics[width=\textwidth]{Fig_LBC_jperio}
     \caption{
       \protect\label{fig:LBC_jperio}
@@ -206 +209 @@
 %        North fold (\textit{jperio = 3 }to $6)$ 
 % -------------------------------------------------------------------------------------------------------------
-\subsection{North-fold (\protect\np{jperio}\forcode{ = 3..6})}
+\subsection[North-fold (\forcode{jperio = [3-6]})]
+{North-fold (\protect\np{jperio}\forcode{ = [3-6]})}
 \label{subsec:LBC_north_fold}
 
@@ -218 +222 @@
 \begin{figure}[!t]
   \begin{center}
-    \includegraphics[width=0.90\textwidth]{Fig_North_Fold_T}
+    \includegraphics[width=\textwidth]{Fig_North_Fold_T}
     \caption{
       \protect\label{fig:North_Fold_T}
@@ -232 +236 @@
 % Exchange with neighbouring processors 
 % ====================================================================
-\section{Exchange with neighbouring processors (\protect\mdl{lbclnk}, \protect\mdl{lib\_mpp})}
+\section[Exchange with neighbouring processors (\textit{lbclnk.F90}, \textit{lib\_mpp.F90})]
+{Exchange with neighbouring processors (\protect\mdl{lbclnk}, \protect\mdl{lib\_mpp})}
 \label{sec:LBC_mpp}
 
@@ -280 +285 @@
 \begin{figure}[!t]
   \begin{center}
-    \includegraphics[width=0.90\textwidth]{Fig_mpp}
+    \includegraphics[width=\textwidth]{Fig_mpp}
     \caption{
       \protect\label{fig:mpp}
@@ -360 +365 @@
 \begin{figure}[!ht]
   \begin{center}
-    \includegraphics[width=0.90\textwidth]{Fig_mppini2}
+    \includegraphics[width=\textwidth]{Fig_mppini2}
     \caption {
       \protect\label{fig:mppini2}
@@ -395 +400 @@
 
 The BDY module was modelled on the OBC module (see NEMO 3.4) and shares many features and
-a similar coding structure \citep{Chanut2005}.
+a similar coding structure \citep{chanut_rpt05}.
 The specification of the location of the open boundary is completely flexible and
 allows for example the open boundary to follow an isobath or other irregular contour. 
@@ -475 +480 @@
 \label{subsec:BDY_FRS_scheme}
 
-The Flow Relaxation Scheme (FRS) \citep{Davies_QJRMS76,Engerdahl_Tel95},
+The Flow Relaxation Scheme (FRS) \citep{davies_QJRMS76,engedahl_T95},
 applies a simple relaxation of the model fields to externally-specified values over
 a zone next to the edge of the model domain.
@@ -514 +519 @@
 \label{subsec:BDY_flather_scheme}
 
-The \citet{Flather_JPO94} scheme is a radiation condition on the normal,
+The \citet{flather_JPO94} scheme is a radiation condition on the normal,
 depth-mean transport across the open boundary.
 It takes the form
@@ -535 +540 @@
 \label{subsec:BDY_orlanski_scheme}
 
-The Orlanski scheme is based on the algorithm described by \citep{Marchesiello2001}, hereafter MMS.
+The Orlanski scheme is based on the algorithm described by \citep{marchesiello.mcwilliams.ea_OM01}, hereafter MMS.
 
 The adaptive Orlanski condition solves a wave plus relaxation equation at the boundary:
@@ -636 +641 @@
 \begin{figure}[!t]
   \begin{center}
-    \includegraphics[width=1.0\textwidth]{Fig_LBC_bdy_geom}
+    \includegraphics[width=\textwidth]{Fig_LBC_bdy_geom}
     \caption {
       \protect\label{fig:LBC_bdy_geom}
@@ -670 +675 @@
 These restrictions mean that data files used with versions of the
 model prior to Version 3.4 may not work with Version 3.4 onwards.
-A \fortran utility {\it bdy\_reorder} exists in the TOOLS directory which
+A \fortran utility {\itshape bdy\_reorder} exists in the TOOLS directory which
 will re-order the data in old BDY data files.
 
@@ -676 +681 @@
 \begin{figure}[!t]
   \begin{center}
-    \includegraphics[width=1.0\textwidth]{Fig_LBC_nc_header}
+    \includegraphics[width=\textwidth]{Fig_LBC_nc_header}
     \caption {
       \protect\label{fig:LBC_nc_header}

@@ -1 @@
-*.aux
-*.bbl
-*.blg
-*.dvi
-*.fdb*
-*.fls
-*.idx
-*.ilg
-*.ind
-*.log
-*.maf
-*.mtc*
-*.out
-*.pdf
-*.toc
-_minted-*
+figures